Multiple sequence alignment - TraesCS7D01G430500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G430500 chr7D 100.000 3182 0 0 1 3182 549782467 549785648 0.000000e+00 5877.0
1 TraesCS7D01G430500 chr7D 82.236 2004 278 44 486 2453 549705075 549707036 0.000000e+00 1657.0
2 TraesCS7D01G430500 chr7D 82.994 1770 233 31 717 2453 549697256 549698990 0.000000e+00 1539.0
3 TraesCS7D01G430500 chr7D 81.662 1925 275 42 681 2559 549770400 549772292 0.000000e+00 1528.0
4 TraesCS7D01G430500 chr7D 98.086 418 6 2 2766 3181 4226252 4225835 0.000000e+00 726.0
5 TraesCS7D01G430500 chr7D 97.636 423 9 1 2759 3181 30481373 30480952 0.000000e+00 725.0
6 TraesCS7D01G430500 chr7D 96.347 438 14 2 2746 3181 71364075 71364512 0.000000e+00 719.0
7 TraesCS7D01G430500 chr7D 96.956 427 11 2 2755 3181 28185914 28185490 0.000000e+00 715.0
8 TraesCS7D01G430500 chr7A 91.537 2257 139 17 545 2758 635270367 635272614 0.000000e+00 3062.0
9 TraesCS7D01G430500 chr7A 83.851 1771 226 28 716 2453 635074709 635076452 0.000000e+00 1631.0
10 TraesCS7D01G430500 chr7A 82.418 1803 255 33 674 2457 635093981 635095740 0.000000e+00 1517.0
11 TraesCS7D01G430500 chr7A 82.107 1794 262 36 789 2551 635241190 635242955 0.000000e+00 1480.0
12 TraesCS7D01G430500 chr7A 81.136 1813 276 38 785 2571 635051457 635053229 0.000000e+00 1393.0
13 TraesCS7D01G430500 chr7A 95.954 173 7 0 149 321 622635121 622634949 6.720000e-72 281.0
14 TraesCS7D01G430500 chr7A 95.161 124 3 2 30 152 635270132 635270253 3.240000e-45 193.0
15 TraesCS7D01G430500 chr7A 89.241 158 5 4 1 147 635269124 635269280 1.510000e-43 187.0
16 TraesCS7D01G430500 chr7A 84.574 188 20 8 2572 2758 635078172 635078351 9.070000e-41 178.0
17 TraesCS7D01G430500 chr7A 81.006 179 14 8 311 482 635093704 635093869 1.200000e-24 124.0
18 TraesCS7D01G430500 chr7A 100.000 35 0 0 312 346 635269279 635269313 7.370000e-07 65.8
19 TraesCS7D01G430500 chr7B 96.444 1575 54 1 1184 2758 594116195 594117767 0.000000e+00 2597.0
20 TraesCS7D01G430500 chr7B 80.988 2004 284 55 491 2457 594048022 594049965 0.000000e+00 1500.0
21 TraesCS7D01G430500 chr7B 81.250 1920 283 44 681 2555 594063484 594065371 0.000000e+00 1480.0
22 TraesCS7D01G430500 chr7B 89.035 456 39 5 734 1186 594111327 594111774 3.590000e-154 555.0
23 TraesCS7D01G430500 chr7B 90.761 368 19 6 312 666 594110932 594111297 7.990000e-131 477.0
24 TraesCS7D01G430500 chr7B 97.024 168 5 0 146 313 534818743 534818576 1.870000e-72 283.0
25 TraesCS7D01G430500 chr7B 92.623 122 5 3 30 150 594110815 594110933 4.220000e-39 172.0
26 TraesCS7D01G430500 chr1D 97.636 423 8 2 2759 3181 111712941 111713361 0.000000e+00 725.0
27 TraesCS7D01G430500 chr4D 97.412 425 10 1 2758 3181 21225052 21225476 0.000000e+00 723.0
28 TraesCS7D01G430500 chr3D 96.528 432 12 3 2752 3181 572203091 572203521 0.000000e+00 712.0
29 TraesCS7D01G430500 chr2D 97.150 421 11 1 2762 3181 381332285 381331865 0.000000e+00 710.0
30 TraesCS7D01G430500 chr2D 96.927 423 12 1 2760 3181 230985892 230986314 0.000000e+00 708.0
31 TraesCS7D01G430500 chr2B 96.045 177 7 0 146 322 182011277 182011101 4.020000e-74 289.0
32 TraesCS7D01G430500 chr2B 94.944 178 8 1 145 321 576089491 576089314 8.690000e-71 278.0
33 TraesCS7D01G430500 chr5B 95.977 174 7 0 143 316 10341578 10341751 1.870000e-72 283.0
34 TraesCS7D01G430500 chr5B 96.512 172 5 1 146 316 695969200 695969371 1.870000e-72 283.0
35 TraesCS7D01G430500 chr2A 96.450 169 6 0 145 313 726979524 726979356 2.420000e-71 279.0
36 TraesCS7D01G430500 chr6B 93.989 183 11 0 140 322 234259581 234259763 8.690000e-71 278.0
37 TraesCS7D01G430500 chr3B 94.054 185 8 3 143 325 658491847 658491664 8.690000e-71 278.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G430500 chr7D 549782467 549785648 3181 False 5877.000000 5877 100.000000 1 3182 1 chr7D.!!$F5 3181
1 TraesCS7D01G430500 chr7D 549705075 549707036 1961 False 1657.000000 1657 82.236000 486 2453 1 chr7D.!!$F3 1967
2 TraesCS7D01G430500 chr7D 549697256 549698990 1734 False 1539.000000 1539 82.994000 717 2453 1 chr7D.!!$F2 1736
3 TraesCS7D01G430500 chr7D 549770400 549772292 1892 False 1528.000000 1528 81.662000 681 2559 1 chr7D.!!$F4 1878
4 TraesCS7D01G430500 chr7A 635241190 635242955 1765 False 1480.000000 1480 82.107000 789 2551 1 chr7A.!!$F2 1762
5 TraesCS7D01G430500 chr7A 635051457 635053229 1772 False 1393.000000 1393 81.136000 785 2571 1 chr7A.!!$F1 1786
6 TraesCS7D01G430500 chr7A 635074709 635078351 3642 False 904.500000 1631 84.212500 716 2758 2 chr7A.!!$F3 2042
7 TraesCS7D01G430500 chr7A 635269124 635272614 3490 False 876.950000 3062 93.984750 1 2758 4 chr7A.!!$F5 2757
8 TraesCS7D01G430500 chr7A 635093704 635095740 2036 False 820.500000 1517 81.712000 311 2457 2 chr7A.!!$F4 2146
9 TraesCS7D01G430500 chr7B 594116195 594117767 1572 False 2597.000000 2597 96.444000 1184 2758 1 chr7B.!!$F3 1574
10 TraesCS7D01G430500 chr7B 594048022 594049965 1943 False 1500.000000 1500 80.988000 491 2457 1 chr7B.!!$F1 1966
11 TraesCS7D01G430500 chr7B 594063484 594065371 1887 False 1480.000000 1480 81.250000 681 2555 1 chr7B.!!$F2 1874
12 TraesCS7D01G430500 chr7B 594110815 594111774 959 False 401.333333 555 90.806333 30 1186 3 chr7B.!!$F4 1156

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
338 1319 0.625849 AAGCCACCATTAGTCCCCTG 59.374 55.000 0.00 0.0 0.00 4.45 F
1292 2438 1.829222 CTGGCCAATCATCCAGCTTTT 59.171 47.619 7.01 0.0 42.79 2.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1425 2571 1.335132 TGTAGATGCCGGAACCCTCC 61.335 60.0 5.05 0.0 38.52 4.30 R
3028 5845 0.035739 GGGAGCGTTTGGTTACTGGA 59.964 55.0 0.00 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.796231 CCGTCCTTCTCCGCGTGG 62.796 72.222 9.28 9.28 0.00 4.94
152 1133 4.681942 GCATCACCGACATTGATACTACTC 59.318 45.833 0.00 0.00 32.23 2.59
153 1134 4.913335 TCACCGACATTGATACTACTCC 57.087 45.455 0.00 0.00 0.00 3.85
154 1135 4.533815 TCACCGACATTGATACTACTCCT 58.466 43.478 0.00 0.00 0.00 3.69
155 1136 4.954202 TCACCGACATTGATACTACTCCTT 59.046 41.667 0.00 0.00 0.00 3.36
156 1137 5.067413 TCACCGACATTGATACTACTCCTTC 59.933 44.000 0.00 0.00 0.00 3.46
157 1138 4.341520 ACCGACATTGATACTACTCCTTCC 59.658 45.833 0.00 0.00 0.00 3.46
158 1139 4.537965 CGACATTGATACTACTCCTTCCG 58.462 47.826 0.00 0.00 0.00 4.30
159 1140 4.036498 CGACATTGATACTACTCCTTCCGT 59.964 45.833 0.00 0.00 0.00 4.69
160 1141 5.450137 CGACATTGATACTACTCCTTCCGTT 60.450 44.000 0.00 0.00 0.00 4.44
161 1142 5.903810 ACATTGATACTACTCCTTCCGTTC 58.096 41.667 0.00 0.00 0.00 3.95
162 1143 4.996788 TTGATACTACTCCTTCCGTTCC 57.003 45.455 0.00 0.00 0.00 3.62
163 1144 2.947652 TGATACTACTCCTTCCGTTCCG 59.052 50.000 0.00 0.00 0.00 4.30
164 1145 2.787473 TACTACTCCTTCCGTTCCGA 57.213 50.000 0.00 0.00 0.00 4.55
165 1146 1.915141 ACTACTCCTTCCGTTCCGAA 58.085 50.000 0.00 0.00 0.00 4.30
166 1147 2.242043 ACTACTCCTTCCGTTCCGAAA 58.758 47.619 0.00 0.00 0.00 3.46
167 1148 2.830321 ACTACTCCTTCCGTTCCGAAAT 59.170 45.455 0.00 0.00 0.00 2.17
168 1149 4.019174 ACTACTCCTTCCGTTCCGAAATA 58.981 43.478 0.00 0.00 0.00 1.40
169 1150 4.648307 ACTACTCCTTCCGTTCCGAAATAT 59.352 41.667 0.00 0.00 0.00 1.28
170 1151 4.482952 ACTCCTTCCGTTCCGAAATATT 57.517 40.909 0.00 0.00 0.00 1.28
171 1152 4.840271 ACTCCTTCCGTTCCGAAATATTT 58.160 39.130 0.00 0.00 0.00 1.40
172 1153 4.634443 ACTCCTTCCGTTCCGAAATATTTG 59.366 41.667 5.17 0.00 0.00 2.32
173 1154 4.581868 TCCTTCCGTTCCGAAATATTTGT 58.418 39.130 5.17 0.00 0.00 2.83
174 1155 4.632688 TCCTTCCGTTCCGAAATATTTGTC 59.367 41.667 5.17 0.00 0.00 3.18
175 1156 4.634443 CCTTCCGTTCCGAAATATTTGTCT 59.366 41.667 5.17 0.00 0.00 3.41
176 1157 5.123344 CCTTCCGTTCCGAAATATTTGTCTT 59.877 40.000 5.17 0.00 0.00 3.01
177 1158 6.349033 CCTTCCGTTCCGAAATATTTGTCTTT 60.349 38.462 5.17 0.00 0.00 2.52
178 1159 6.173191 TCCGTTCCGAAATATTTGTCTTTC 57.827 37.500 5.17 0.00 0.00 2.62
179 1160 5.935789 TCCGTTCCGAAATATTTGTCTTTCT 59.064 36.000 5.17 0.00 30.80 2.52
180 1161 7.098477 TCCGTTCCGAAATATTTGTCTTTCTA 58.902 34.615 5.17 0.00 30.80 2.10
181 1162 7.277098 TCCGTTCCGAAATATTTGTCTTTCTAG 59.723 37.037 5.17 0.00 30.80 2.43
182 1163 6.900299 CGTTCCGAAATATTTGTCTTTCTAGC 59.100 38.462 5.17 0.00 30.80 3.42
183 1164 6.920569 TCCGAAATATTTGTCTTTCTAGCC 57.079 37.500 5.17 0.00 30.80 3.93
184 1165 6.650120 TCCGAAATATTTGTCTTTCTAGCCT 58.350 36.000 5.17 0.00 30.80 4.58
185 1166 7.110155 TCCGAAATATTTGTCTTTCTAGCCTT 58.890 34.615 5.17 0.00 30.80 4.35
186 1167 7.280205 TCCGAAATATTTGTCTTTCTAGCCTTC 59.720 37.037 5.17 0.00 30.80 3.46
187 1168 7.281100 CCGAAATATTTGTCTTTCTAGCCTTCT 59.719 37.037 5.17 0.00 30.80 2.85
188 1169 8.331742 CGAAATATTTGTCTTTCTAGCCTTCTC 58.668 37.037 5.17 0.00 30.80 2.87
189 1170 9.167311 GAAATATTTGTCTTTCTAGCCTTCTCA 57.833 33.333 5.17 0.00 0.00 3.27
190 1171 9.520515 AAATATTTGTCTTTCTAGCCTTCTCAA 57.479 29.630 0.00 0.00 0.00 3.02
191 1172 9.520515 AATATTTGTCTTTCTAGCCTTCTCAAA 57.479 29.630 0.00 0.00 0.00 2.69
192 1173 9.692325 ATATTTGTCTTTCTAGCCTTCTCAAAT 57.308 29.630 0.00 0.00 37.02 2.32
193 1174 6.808008 TTGTCTTTCTAGCCTTCTCAAATG 57.192 37.500 0.00 0.00 0.00 2.32
194 1175 5.248640 TGTCTTTCTAGCCTTCTCAAATGG 58.751 41.667 0.00 0.00 0.00 3.16
195 1176 5.013079 TGTCTTTCTAGCCTTCTCAAATGGA 59.987 40.000 0.00 0.00 0.00 3.41
196 1177 5.352846 GTCTTTCTAGCCTTCTCAAATGGAC 59.647 44.000 0.00 0.00 0.00 4.02
197 1178 5.249393 TCTTTCTAGCCTTCTCAAATGGACT 59.751 40.000 0.00 0.00 0.00 3.85
198 1179 6.440647 TCTTTCTAGCCTTCTCAAATGGACTA 59.559 38.462 0.00 0.00 0.00 2.59
199 1180 5.599999 TCTAGCCTTCTCAAATGGACTAC 57.400 43.478 0.00 0.00 0.00 2.73
200 1181 5.023452 TCTAGCCTTCTCAAATGGACTACA 58.977 41.667 0.00 0.00 0.00 2.74
201 1182 4.640771 AGCCTTCTCAAATGGACTACAA 57.359 40.909 0.00 0.00 0.00 2.41
202 1183 4.327680 AGCCTTCTCAAATGGACTACAAC 58.672 43.478 0.00 0.00 0.00 3.32
203 1184 4.072131 GCCTTCTCAAATGGACTACAACA 58.928 43.478 0.00 0.00 0.00 3.33
204 1185 4.702131 GCCTTCTCAAATGGACTACAACAT 59.298 41.667 0.00 0.00 0.00 2.71
205 1186 5.880332 GCCTTCTCAAATGGACTACAACATA 59.120 40.000 0.00 0.00 0.00 2.29
206 1187 6.183360 GCCTTCTCAAATGGACTACAACATAC 60.183 42.308 0.00 0.00 0.00 2.39
207 1188 6.036083 CCTTCTCAAATGGACTACAACATACG 59.964 42.308 0.00 0.00 0.00 3.06
208 1189 5.416083 TCTCAAATGGACTACAACATACGG 58.584 41.667 0.00 0.00 0.00 4.02
209 1190 5.186215 TCTCAAATGGACTACAACATACGGA 59.814 40.000 0.00 0.00 0.00 4.69
210 1191 5.984725 TCAAATGGACTACAACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
211 1192 5.815222 TCAAATGGACTACAACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
213 1194 6.474140 AATGGACTACAACATACGGATGTA 57.526 37.500 15.10 0.00 45.93 2.29
214 1195 6.665992 ATGGACTACAACATACGGATGTAT 57.334 37.500 15.10 8.21 45.93 2.29
229 1210 9.692749 ATACGGATGTATGTAGACATGTTTTAG 57.307 33.333 0.00 0.00 40.18 1.85
230 1211 7.778083 ACGGATGTATGTAGACATGTTTTAGA 58.222 34.615 0.00 0.00 40.18 2.10
231 1212 7.921214 ACGGATGTATGTAGACATGTTTTAGAG 59.079 37.037 0.00 0.00 40.18 2.43
232 1213 7.921214 CGGATGTATGTAGACATGTTTTAGAGT 59.079 37.037 0.00 0.00 40.18 3.24
233 1214 9.035607 GGATGTATGTAGACATGTTTTAGAGTG 57.964 37.037 0.00 0.00 40.18 3.51
234 1215 9.587772 GATGTATGTAGACATGTTTTAGAGTGT 57.412 33.333 0.00 0.00 40.18 3.55
240 1221 9.856488 TGTAGACATGTTTTAGAGTGTAGATTC 57.144 33.333 0.00 0.00 0.00 2.52
241 1222 9.856488 GTAGACATGTTTTAGAGTGTAGATTCA 57.144 33.333 0.00 0.00 0.00 2.57
242 1223 8.764524 AGACATGTTTTAGAGTGTAGATTCAC 57.235 34.615 0.00 0.00 38.46 3.18
253 1234 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
254 1235 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
255 1236 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
256 1237 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
257 1238 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
258 1239 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
259 1240 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
260 1241 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
261 1242 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
262 1243 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
263 1244 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
264 1245 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
265 1246 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
266 1247 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
267 1248 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
268 1249 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
269 1250 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
270 1251 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
271 1252 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
272 1253 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
273 1254 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
274 1255 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
275 1256 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
276 1257 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
277 1258 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
278 1259 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
279 1260 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
280 1261 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
281 1262 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
282 1263 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
283 1264 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
284 1265 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
285 1266 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
286 1267 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
287 1268 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
288 1269 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
289 1270 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
290 1271 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
291 1272 9.566432 ACTTGTTGAAATCTCTAGAAAGACAAT 57.434 29.630 0.00 0.00 0.00 2.71
307 1288 9.379791 AGAAAGACAATTATTTAGGAACGTAGG 57.620 33.333 0.00 0.00 0.00 3.18
308 1289 8.502105 AAAGACAATTATTTAGGAACGTAGGG 57.498 34.615 0.00 0.00 0.00 3.53
309 1290 7.427989 AGACAATTATTTAGGAACGTAGGGA 57.572 36.000 0.00 0.00 0.00 4.20
336 1317 0.919710 AGAAGCCACCATTAGTCCCC 59.080 55.000 0.00 0.00 0.00 4.81
337 1318 0.919710 GAAGCCACCATTAGTCCCCT 59.080 55.000 0.00 0.00 0.00 4.79
338 1319 0.625849 AAGCCACCATTAGTCCCCTG 59.374 55.000 0.00 0.00 0.00 4.45
440 1448 8.606830 AGATTAGTCAACAAGGATTAGGAGTTT 58.393 33.333 0.00 0.00 0.00 2.66
460 1468 2.827800 TGCTAGCTGATAGGTGCATC 57.172 50.000 17.23 0.00 29.63 3.91
489 1532 7.095439 GCATGGCTATTTGATTACAGAGTAGAC 60.095 40.741 0.00 0.00 0.00 2.59
531 1579 7.829725 ACAAGCATAGAAGCATTTGTTCATTA 58.170 30.769 0.00 0.00 31.37 1.90
533 1581 7.636150 AGCATAGAAGCATTTGTTCATTACT 57.364 32.000 0.00 0.00 36.85 2.24
558 1607 8.918202 TTTTAACCTTGTATTCATCACAGACT 57.082 30.769 0.00 0.00 0.00 3.24
580 1629 6.438763 ACTTGTTCTTGCAGTAAATACTTGC 58.561 36.000 0.00 7.58 33.46 4.01
601 1653 8.126700 ACTTGCATTACATTTAAATAGTACGCC 58.873 33.333 0.00 0.00 0.00 5.68
607 1659 6.206600 ACATTTAAATAGTACGCCGAATCG 57.793 37.500 0.00 0.00 0.00 3.34
787 1864 3.378427 AGCCAGTTCACACTTTTGAGTTC 59.622 43.478 0.00 0.00 0.00 3.01
864 2003 7.794349 GCTAGAACATTCGAATTTAAAGGATCG 59.206 37.037 8.21 12.18 36.67 3.69
900 2039 2.390225 TGTGCCAAACCCCAAATAGT 57.610 45.000 0.00 0.00 0.00 2.12
1010 2156 6.036735 CGGTGGTCAATAACTATGACGAAAAT 59.963 38.462 0.00 0.00 46.41 1.82
1155 2301 3.535561 CTCCACCGATAAGTTCATGCTT 58.464 45.455 0.00 0.00 0.00 3.91
1169 2315 2.970324 GCTTGACAACCGTCGCCA 60.970 61.111 0.00 0.00 45.80 5.69
1254 2400 5.104277 TGTCTTCCGTGATAATGGGGTTATT 60.104 40.000 0.00 0.00 33.16 1.40
1290 2436 3.202548 CTGGCCAATCATCCAGCTT 57.797 52.632 7.01 0.00 42.79 3.74
1292 2438 1.829222 CTGGCCAATCATCCAGCTTTT 59.171 47.619 7.01 0.00 42.79 2.27
1343 2489 5.645497 GTGATGGCTTTCTTATCTTGTCTGT 59.355 40.000 0.00 0.00 0.00 3.41
1425 2571 1.560923 GAGTTCCATCGTCATCACGG 58.439 55.000 0.00 0.00 46.70 4.94
1458 2610 5.006386 GGCATCTACATAGCTGGCTTTTAT 58.994 41.667 8.58 0.00 40.50 1.40
1503 2655 1.959226 GGTGCTCTGGTTTTCGCGA 60.959 57.895 3.71 3.71 0.00 5.87
1692 2844 2.936919 ACATGAAGACTGCTGTGGAA 57.063 45.000 0.00 0.00 0.00 3.53
1879 3031 4.026052 CTGGGCCTTGAATTACAGGATTT 58.974 43.478 4.53 0.00 0.00 2.17
2261 3429 7.339721 TGACTATGGTCCTAGTTCTTACTTCAG 59.660 40.741 6.77 0.00 41.47 3.02
2309 3482 0.598065 GCCTGTGGTAGCACTTTTGG 59.402 55.000 24.35 19.79 0.00 3.28
2402 3588 4.035909 TGCCCTTTTACTTTCACTTCGAAC 59.964 41.667 0.00 0.00 31.73 3.95
2512 3698 7.148641 GCTAGTAGAGAATAAGTGCAGCAATA 58.851 38.462 0.00 0.00 0.00 1.90
2621 5437 5.374071 AGTTAGTTGTGGGACTTTTAGGTG 58.626 41.667 0.00 0.00 0.00 4.00
2623 5439 2.512476 AGTTGTGGGACTTTTAGGTGGT 59.488 45.455 0.00 0.00 0.00 4.16
2624 5440 3.717913 AGTTGTGGGACTTTTAGGTGGTA 59.282 43.478 0.00 0.00 0.00 3.25
2688 5505 2.131183 GATATTCGCTGCTCTGTGACC 58.869 52.381 0.00 0.00 0.00 4.02
2758 5575 3.288092 GTTCCTCCTGGTCTTTGTTGTT 58.712 45.455 0.00 0.00 34.23 2.83
2759 5576 3.662759 TCCTCCTGGTCTTTGTTGTTT 57.337 42.857 0.00 0.00 34.23 2.83
2760 5577 3.976015 TCCTCCTGGTCTTTGTTGTTTT 58.024 40.909 0.00 0.00 34.23 2.43
2761 5578 4.349365 TCCTCCTGGTCTTTGTTGTTTTT 58.651 39.130 0.00 0.00 34.23 1.94
2781 5598 2.281539 TTTTCGAAAAGGGGGACTCC 57.718 50.000 19.08 0.00 0.00 3.85
2795 5612 4.247380 CTCCCCGGCCTCTGCATC 62.247 72.222 0.00 0.00 40.13 3.91
2797 5614 4.559063 CCCCGGCCTCTGCATCAG 62.559 72.222 0.00 0.00 40.13 2.90
2798 5615 3.473647 CCCGGCCTCTGCATCAGA 61.474 66.667 0.00 0.00 38.25 3.27
2799 5616 2.586245 CCGGCCTCTGCATCAGAA 59.414 61.111 0.00 0.00 40.18 3.02
2800 5617 1.817099 CCGGCCTCTGCATCAGAAC 60.817 63.158 0.00 0.00 40.18 3.01
2801 5618 2.169789 CGGCCTCTGCATCAGAACG 61.170 63.158 0.00 0.63 40.18 3.95
2802 5619 1.219124 GGCCTCTGCATCAGAACGA 59.781 57.895 0.00 0.00 40.18 3.85
2803 5620 0.179062 GGCCTCTGCATCAGAACGAT 60.179 55.000 0.00 0.00 40.18 3.73
2812 5629 1.193203 CATCAGAACGATGCATACGGC 59.807 52.381 18.34 11.86 44.95 5.68
2813 5630 0.529773 TCAGAACGATGCATACGGCC 60.530 55.000 18.34 0.00 43.89 6.13
2814 5631 0.809636 CAGAACGATGCATACGGCCA 60.810 55.000 18.34 0.00 43.89 5.36
2815 5632 0.810031 AGAACGATGCATACGGCCAC 60.810 55.000 18.34 9.37 43.89 5.01
2816 5633 0.810031 GAACGATGCATACGGCCACT 60.810 55.000 18.34 0.00 43.89 4.00
2817 5634 0.392461 AACGATGCATACGGCCACTT 60.392 50.000 18.34 5.11 43.89 3.16
2818 5635 0.462375 ACGATGCATACGGCCACTTA 59.538 50.000 18.34 0.00 43.89 2.24
2819 5636 1.139989 CGATGCATACGGCCACTTAG 58.860 55.000 2.24 0.00 43.89 2.18
2820 5637 1.269569 CGATGCATACGGCCACTTAGA 60.270 52.381 2.24 0.00 43.89 2.10
2821 5638 2.610479 CGATGCATACGGCCACTTAGAT 60.610 50.000 2.24 0.00 43.89 1.98
2822 5639 3.366985 CGATGCATACGGCCACTTAGATA 60.367 47.826 2.24 0.00 43.89 1.98
2823 5640 4.566004 GATGCATACGGCCACTTAGATAA 58.434 43.478 2.24 0.00 43.89 1.75
2824 5641 4.409718 TGCATACGGCCACTTAGATAAA 57.590 40.909 2.24 0.00 43.89 1.40
2825 5642 4.968259 TGCATACGGCCACTTAGATAAAT 58.032 39.130 2.24 0.00 43.89 1.40
2826 5643 6.104146 TGCATACGGCCACTTAGATAAATA 57.896 37.500 2.24 0.00 43.89 1.40
2827 5644 6.526526 TGCATACGGCCACTTAGATAAATAA 58.473 36.000 2.24 0.00 43.89 1.40
2828 5645 6.993308 TGCATACGGCCACTTAGATAAATAAA 59.007 34.615 2.24 0.00 43.89 1.40
2829 5646 7.499563 TGCATACGGCCACTTAGATAAATAAAA 59.500 33.333 2.24 0.00 43.89 1.52
2830 5647 8.512138 GCATACGGCCACTTAGATAAATAAAAT 58.488 33.333 2.24 0.00 36.11 1.82
2833 5650 7.712797 ACGGCCACTTAGATAAATAAAATTGG 58.287 34.615 2.24 0.00 0.00 3.16
2834 5651 7.340999 ACGGCCACTTAGATAAATAAAATTGGT 59.659 33.333 2.24 0.00 0.00 3.67
2835 5652 8.194769 CGGCCACTTAGATAAATAAAATTGGTT 58.805 33.333 2.24 0.00 0.00 3.67
2836 5653 9.529325 GGCCACTTAGATAAATAAAATTGGTTC 57.471 33.333 0.00 0.00 0.00 3.62
2847 5664 8.655651 AAATAAAATTGGTTCAACAATGTCGT 57.344 26.923 0.00 0.00 40.71 4.34
2848 5665 9.751542 AAATAAAATTGGTTCAACAATGTCGTA 57.248 25.926 0.00 0.00 40.71 3.43
2849 5666 8.964420 ATAAAATTGGTTCAACAATGTCGTAG 57.036 30.769 0.00 0.00 40.71 3.51
2850 5667 6.627395 AAATTGGTTCAACAATGTCGTAGA 57.373 33.333 0.00 0.00 40.71 2.59
2851 5668 5.862924 ATTGGTTCAACAATGTCGTAGAG 57.137 39.130 0.00 0.00 39.47 2.43
2852 5669 4.330944 TGGTTCAACAATGTCGTAGAGT 57.669 40.909 0.00 0.00 36.95 3.24
2853 5670 4.304110 TGGTTCAACAATGTCGTAGAGTC 58.696 43.478 0.00 0.00 36.95 3.36
2854 5671 3.364023 GGTTCAACAATGTCGTAGAGTCG 59.636 47.826 0.00 0.00 36.95 4.18
2855 5672 3.909776 TCAACAATGTCGTAGAGTCGT 57.090 42.857 0.00 0.00 36.95 4.34
2856 5673 5.149273 GTTCAACAATGTCGTAGAGTCGTA 58.851 41.667 0.00 0.00 36.95 3.43
2857 5674 5.361135 TCAACAATGTCGTAGAGTCGTAA 57.639 39.130 0.00 0.00 36.95 3.18
2858 5675 5.761003 TCAACAATGTCGTAGAGTCGTAAA 58.239 37.500 0.00 0.00 36.95 2.01
2859 5676 6.207928 TCAACAATGTCGTAGAGTCGTAAAA 58.792 36.000 0.00 0.00 36.95 1.52
2860 5677 6.142798 TCAACAATGTCGTAGAGTCGTAAAAC 59.857 38.462 0.00 0.00 36.95 2.43
2861 5678 5.522456 ACAATGTCGTAGAGTCGTAAAACA 58.478 37.500 0.00 0.00 36.95 2.83
2862 5679 5.978919 ACAATGTCGTAGAGTCGTAAAACAA 59.021 36.000 0.00 0.00 36.95 2.83
2863 5680 6.476380 ACAATGTCGTAGAGTCGTAAAACAAA 59.524 34.615 0.00 0.00 36.95 2.83
2864 5681 7.010367 ACAATGTCGTAGAGTCGTAAAACAAAA 59.990 33.333 0.00 0.00 36.95 2.44
2865 5682 7.647907 ATGTCGTAGAGTCGTAAAACAAAAT 57.352 32.000 0.00 0.00 36.95 1.82
2866 5683 8.746922 ATGTCGTAGAGTCGTAAAACAAAATA 57.253 30.769 0.00 0.00 36.95 1.40
2867 5684 8.572828 TGTCGTAGAGTCGTAAAACAAAATAA 57.427 30.769 0.00 0.00 36.95 1.40
2868 5685 9.029243 TGTCGTAGAGTCGTAAAACAAAATAAA 57.971 29.630 0.00 0.00 36.95 1.40
2869 5686 9.508495 GTCGTAGAGTCGTAAAACAAAATAAAG 57.492 33.333 0.00 0.00 36.95 1.85
2870 5687 9.248291 TCGTAGAGTCGTAAAACAAAATAAAGT 57.752 29.630 0.00 0.00 0.00 2.66
2871 5688 9.508495 CGTAGAGTCGTAAAACAAAATAAAGTC 57.492 33.333 0.00 0.00 0.00 3.01
2872 5689 9.508495 GTAGAGTCGTAAAACAAAATAAAGTCG 57.492 33.333 0.00 0.00 0.00 4.18
2873 5690 8.356533 AGAGTCGTAAAACAAAATAAAGTCGA 57.643 30.769 0.00 0.00 0.00 4.20
2874 5691 8.485591 AGAGTCGTAAAACAAAATAAAGTCGAG 58.514 33.333 0.00 0.00 0.00 4.04
2875 5692 7.067728 AGTCGTAAAACAAAATAAAGTCGAGC 58.932 34.615 0.00 0.00 0.00 5.03
2876 5693 7.042254 AGTCGTAAAACAAAATAAAGTCGAGCT 60.042 33.333 0.00 0.00 0.00 4.09
2877 5694 7.265705 GTCGTAAAACAAAATAAAGTCGAGCTC 59.734 37.037 2.73 2.73 0.00 4.09
2878 5695 7.042590 TCGTAAAACAAAATAAAGTCGAGCTCA 60.043 33.333 15.40 0.00 0.00 4.26
2879 5696 7.058016 CGTAAAACAAAATAAAGTCGAGCTCAC 59.942 37.037 15.40 11.03 0.00 3.51
2880 5697 6.371809 AAACAAAATAAAGTCGAGCTCACA 57.628 33.333 15.40 0.00 0.00 3.58
2881 5698 6.560253 AACAAAATAAAGTCGAGCTCACAT 57.440 33.333 15.40 1.46 0.00 3.21
2882 5699 7.667043 AACAAAATAAAGTCGAGCTCACATA 57.333 32.000 15.40 8.84 0.00 2.29
2883 5700 7.295952 ACAAAATAAAGTCGAGCTCACATAG 57.704 36.000 15.40 0.00 0.00 2.23
2884 5701 7.097192 ACAAAATAAAGTCGAGCTCACATAGA 58.903 34.615 15.40 0.00 0.00 1.98
2885 5702 7.063544 ACAAAATAAAGTCGAGCTCACATAGAC 59.936 37.037 15.40 12.19 0.00 2.59
2886 5703 3.512033 AAAGTCGAGCTCACATAGACC 57.488 47.619 15.40 0.00 32.70 3.85
2887 5704 2.428544 AGTCGAGCTCACATAGACCT 57.571 50.000 15.40 0.54 32.70 3.85
2888 5705 2.294074 AGTCGAGCTCACATAGACCTC 58.706 52.381 15.40 0.00 32.70 3.85
2889 5706 3.835686 CGAGCTCACATAGACCTCG 57.164 57.895 15.40 0.00 43.61 4.63
2891 5708 2.766970 GAGCTCACATAGACCTCGAC 57.233 55.000 9.40 0.00 0.00 4.20
2892 5709 1.003331 GAGCTCACATAGACCTCGACG 60.003 57.143 9.40 0.00 0.00 5.12
2893 5710 0.592754 GCTCACATAGACCTCGACGC 60.593 60.000 0.00 0.00 0.00 5.19
2894 5711 1.018148 CTCACATAGACCTCGACGCT 58.982 55.000 0.00 0.00 0.00 5.07
2895 5712 2.210961 CTCACATAGACCTCGACGCTA 58.789 52.381 0.00 0.00 0.00 4.26
2896 5713 2.612672 CTCACATAGACCTCGACGCTAA 59.387 50.000 0.00 0.00 0.00 3.09
2897 5714 3.011818 TCACATAGACCTCGACGCTAAA 58.988 45.455 0.00 0.00 0.00 1.85
2898 5715 3.441222 TCACATAGACCTCGACGCTAAAA 59.559 43.478 0.00 0.00 0.00 1.52
2899 5716 3.546670 CACATAGACCTCGACGCTAAAAC 59.453 47.826 0.00 0.00 0.00 2.43
2900 5717 3.192001 ACATAGACCTCGACGCTAAAACA 59.808 43.478 0.00 0.00 0.00 2.83
2901 5718 2.349297 AGACCTCGACGCTAAAACAG 57.651 50.000 0.00 0.00 0.00 3.16
2902 5719 1.884579 AGACCTCGACGCTAAAACAGA 59.115 47.619 0.00 0.00 0.00 3.41
2903 5720 2.295349 AGACCTCGACGCTAAAACAGAA 59.705 45.455 0.00 0.00 0.00 3.02
2904 5721 3.054878 GACCTCGACGCTAAAACAGAAA 58.945 45.455 0.00 0.00 0.00 2.52
2905 5722 3.460103 ACCTCGACGCTAAAACAGAAAA 58.540 40.909 0.00 0.00 0.00 2.29
2906 5723 3.872771 ACCTCGACGCTAAAACAGAAAAA 59.127 39.130 0.00 0.00 0.00 1.94
2907 5724 4.025145 ACCTCGACGCTAAAACAGAAAAAG 60.025 41.667 0.00 0.00 0.00 2.27
2908 5725 4.455124 CTCGACGCTAAAACAGAAAAAGG 58.545 43.478 0.00 0.00 0.00 3.11
2909 5726 2.971261 CGACGCTAAAACAGAAAAAGGC 59.029 45.455 0.00 0.00 0.00 4.35
2910 5727 3.305964 GACGCTAAAACAGAAAAAGGCC 58.694 45.455 0.00 0.00 0.00 5.19
2911 5728 2.691011 ACGCTAAAACAGAAAAAGGCCA 59.309 40.909 5.01 0.00 0.00 5.36
2912 5729 3.320826 ACGCTAAAACAGAAAAAGGCCAT 59.679 39.130 5.01 0.00 0.00 4.40
2913 5730 4.521256 ACGCTAAAACAGAAAAAGGCCATA 59.479 37.500 5.01 0.00 0.00 2.74
2914 5731 5.010213 ACGCTAAAACAGAAAAAGGCCATAA 59.990 36.000 5.01 0.00 0.00 1.90
2915 5732 5.923684 CGCTAAAACAGAAAAAGGCCATAAA 59.076 36.000 5.01 0.00 0.00 1.40
2916 5733 6.089417 CGCTAAAACAGAAAAAGGCCATAAAG 59.911 38.462 5.01 0.00 0.00 1.85
2917 5734 6.128553 GCTAAAACAGAAAAAGGCCATAAAGC 60.129 38.462 5.01 0.00 0.00 3.51
2926 5743 1.510844 GCCATAAAGCCACAACCGG 59.489 57.895 0.00 0.00 0.00 5.28
2934 5751 2.045438 CCACAACCGGCTGGCATA 60.045 61.111 12.89 0.00 39.70 3.14
2935 5752 1.677300 CCACAACCGGCTGGCATAA 60.677 57.895 12.89 0.00 39.70 1.90
2936 5753 1.037030 CCACAACCGGCTGGCATAAT 61.037 55.000 12.89 0.00 39.70 1.28
2937 5754 1.674359 CACAACCGGCTGGCATAATA 58.326 50.000 12.89 0.00 39.70 0.98
2938 5755 2.020720 CACAACCGGCTGGCATAATAA 58.979 47.619 12.89 0.00 39.70 1.40
2939 5756 2.425312 CACAACCGGCTGGCATAATAAA 59.575 45.455 12.89 0.00 39.70 1.40
2940 5757 2.687935 ACAACCGGCTGGCATAATAAAG 59.312 45.455 12.89 0.00 39.70 1.85
2941 5758 2.948979 CAACCGGCTGGCATAATAAAGA 59.051 45.455 12.89 0.00 39.70 2.52
2942 5759 3.508845 ACCGGCTGGCATAATAAAGAT 57.491 42.857 12.89 0.00 39.70 2.40
2943 5760 4.634012 ACCGGCTGGCATAATAAAGATA 57.366 40.909 12.89 0.00 39.70 1.98
2944 5761 4.579869 ACCGGCTGGCATAATAAAGATAG 58.420 43.478 12.89 0.00 39.70 2.08
2945 5762 3.941483 CCGGCTGGCATAATAAAGATAGG 59.059 47.826 0.00 0.00 0.00 2.57
2946 5763 4.323485 CCGGCTGGCATAATAAAGATAGGA 60.323 45.833 0.00 0.00 0.00 2.94
2947 5764 5.245531 CGGCTGGCATAATAAAGATAGGAA 58.754 41.667 1.08 0.00 0.00 3.36
2948 5765 5.705441 CGGCTGGCATAATAAAGATAGGAAA 59.295 40.000 1.08 0.00 0.00 3.13
2949 5766 6.206634 CGGCTGGCATAATAAAGATAGGAAAA 59.793 38.462 1.08 0.00 0.00 2.29
2950 5767 7.371159 GGCTGGCATAATAAAGATAGGAAAAC 58.629 38.462 0.00 0.00 0.00 2.43
2951 5768 7.231519 GGCTGGCATAATAAAGATAGGAAAACT 59.768 37.037 0.00 0.00 0.00 2.66
2952 5769 9.284968 GCTGGCATAATAAAGATAGGAAAACTA 57.715 33.333 0.00 0.00 35.80 2.24
2969 5786 9.794719 AGGAAAACTAATTGCCTATCCTATTAC 57.205 33.333 0.00 0.00 46.22 1.89
2970 5787 9.569122 GGAAAACTAATTGCCTATCCTATTACA 57.431 33.333 0.00 0.00 33.30 2.41
2974 5791 9.726438 AACTAATTGCCTATCCTATTACATGAC 57.274 33.333 0.00 0.00 0.00 3.06
2975 5792 8.322091 ACTAATTGCCTATCCTATTACATGACC 58.678 37.037 0.00 0.00 0.00 4.02
2976 5793 4.801330 TGCCTATCCTATTACATGACCG 57.199 45.455 0.00 0.00 0.00 4.79
2977 5794 3.056107 TGCCTATCCTATTACATGACCGC 60.056 47.826 0.00 0.00 0.00 5.68
2978 5795 3.679083 GCCTATCCTATTACATGACCGCC 60.679 52.174 0.00 0.00 0.00 6.13
2979 5796 3.513912 CCTATCCTATTACATGACCGCCA 59.486 47.826 0.00 0.00 0.00 5.69
2980 5797 4.162320 CCTATCCTATTACATGACCGCCAT 59.838 45.833 0.00 0.00 35.44 4.40
2981 5798 3.678056 TCCTATTACATGACCGCCATC 57.322 47.619 0.00 0.00 31.94 3.51
2982 5799 2.301870 TCCTATTACATGACCGCCATCC 59.698 50.000 0.00 0.00 31.94 3.51
2983 5800 2.038426 CCTATTACATGACCGCCATCCA 59.962 50.000 0.00 0.00 31.94 3.41
2984 5801 2.727123 ATTACATGACCGCCATCCAA 57.273 45.000 0.00 0.00 31.94 3.53
2985 5802 2.498644 TTACATGACCGCCATCCAAA 57.501 45.000 0.00 0.00 31.94 3.28
2986 5803 1.745232 TACATGACCGCCATCCAAAC 58.255 50.000 0.00 0.00 31.94 2.93
2987 5804 0.965363 ACATGACCGCCATCCAAACC 60.965 55.000 0.00 0.00 31.94 3.27
2988 5805 1.748879 ATGACCGCCATCCAAACCG 60.749 57.895 0.00 0.00 0.00 4.44
2989 5806 3.131478 GACCGCCATCCAAACCGG 61.131 66.667 0.00 0.00 45.80 5.28
2991 5808 2.675075 CCGCCATCCAAACCGGTT 60.675 61.111 15.86 15.86 36.18 4.44
2992 5809 2.566010 CGCCATCCAAACCGGTTG 59.434 61.111 23.08 14.70 36.94 3.77
2993 5810 1.969064 CGCCATCCAAACCGGTTGA 60.969 57.895 23.08 15.50 39.87 3.18
2994 5811 1.519751 CGCCATCCAAACCGGTTGAA 61.520 55.000 23.08 9.90 39.87 2.69
2995 5812 0.243636 GCCATCCAAACCGGTTGAAG 59.756 55.000 23.08 13.88 39.87 3.02
2996 5813 1.904287 CCATCCAAACCGGTTGAAGA 58.096 50.000 23.08 17.89 39.87 2.87
2997 5814 2.446435 CCATCCAAACCGGTTGAAGAT 58.554 47.619 23.08 19.33 39.87 2.40
2998 5815 3.616219 CCATCCAAACCGGTTGAAGATA 58.384 45.455 23.08 4.03 39.87 1.98
2999 5816 4.207165 CCATCCAAACCGGTTGAAGATAT 58.793 43.478 23.08 6.33 39.87 1.63
3000 5817 4.275936 CCATCCAAACCGGTTGAAGATATC 59.724 45.833 23.08 0.00 39.87 1.63
3001 5818 3.881220 TCCAAACCGGTTGAAGATATCC 58.119 45.455 23.08 0.00 39.87 2.59
3002 5819 2.949644 CCAAACCGGTTGAAGATATCCC 59.050 50.000 23.08 0.00 39.87 3.85
3003 5820 2.612212 CAAACCGGTTGAAGATATCCCG 59.388 50.000 23.08 9.61 39.87 5.14
3004 5821 0.106149 ACCGGTTGAAGATATCCCGC 59.894 55.000 0.00 0.00 37.37 6.13
3005 5822 0.944311 CCGGTTGAAGATATCCCGCG 60.944 60.000 10.77 0.00 37.37 6.46
3006 5823 1.557443 CGGTTGAAGATATCCCGCGC 61.557 60.000 0.00 0.00 0.00 6.86
3007 5824 0.249911 GGTTGAAGATATCCCGCGCT 60.250 55.000 5.56 0.00 0.00 5.92
3008 5825 1.000506 GGTTGAAGATATCCCGCGCTA 59.999 52.381 5.56 0.00 0.00 4.26
3009 5826 2.059541 GTTGAAGATATCCCGCGCTAC 58.940 52.381 5.56 0.00 0.00 3.58
3010 5827 0.601558 TGAAGATATCCCGCGCTACC 59.398 55.000 5.56 0.00 0.00 3.18
3011 5828 0.601558 GAAGATATCCCGCGCTACCA 59.398 55.000 5.56 0.00 0.00 3.25
3012 5829 1.204941 GAAGATATCCCGCGCTACCAT 59.795 52.381 5.56 0.00 0.00 3.55
3013 5830 0.818296 AGATATCCCGCGCTACCATC 59.182 55.000 5.56 1.77 0.00 3.51
3014 5831 0.818296 GATATCCCGCGCTACCATCT 59.182 55.000 5.56 0.00 0.00 2.90
3015 5832 0.818296 ATATCCCGCGCTACCATCTC 59.182 55.000 5.56 0.00 0.00 2.75
3016 5833 1.248785 TATCCCGCGCTACCATCTCC 61.249 60.000 5.56 0.00 0.00 3.71
3017 5834 4.301027 CCCGCGCTACCATCTCCC 62.301 72.222 5.56 0.00 0.00 4.30
3018 5835 3.536917 CCGCGCTACCATCTCCCA 61.537 66.667 5.56 0.00 0.00 4.37
3019 5836 2.279517 CGCGCTACCATCTCCCAC 60.280 66.667 5.56 0.00 0.00 4.61
3020 5837 2.109181 GCGCTACCATCTCCCACC 59.891 66.667 0.00 0.00 0.00 4.61
3021 5838 2.417516 CGCTACCATCTCCCACCG 59.582 66.667 0.00 0.00 0.00 4.94
3022 5839 2.822399 GCTACCATCTCCCACCGG 59.178 66.667 0.00 0.00 0.00 5.28
3023 5840 1.760875 GCTACCATCTCCCACCGGA 60.761 63.158 9.46 0.00 36.45 5.14
3024 5841 2.029307 GCTACCATCTCCCACCGGAC 62.029 65.000 9.46 0.00 33.32 4.79
3025 5842 0.686441 CTACCATCTCCCACCGGACA 60.686 60.000 9.46 0.00 33.32 4.02
3026 5843 0.686441 TACCATCTCCCACCGGACAG 60.686 60.000 9.46 0.00 33.32 3.51
3027 5844 1.685765 CCATCTCCCACCGGACAGA 60.686 63.158 9.46 3.41 33.32 3.41
3028 5845 1.050988 CCATCTCCCACCGGACAGAT 61.051 60.000 9.46 5.91 33.32 2.90
3029 5846 0.390860 CATCTCCCACCGGACAGATC 59.609 60.000 9.46 0.00 33.32 2.75
3030 5847 0.760945 ATCTCCCACCGGACAGATCC 60.761 60.000 9.46 0.00 42.28 3.36
3031 5848 1.685765 CTCCCACCGGACAGATCCA 60.686 63.158 9.46 0.00 46.67 3.41
3032 5849 1.680522 CTCCCACCGGACAGATCCAG 61.681 65.000 9.46 0.00 46.67 3.86
3033 5850 1.990060 CCCACCGGACAGATCCAGT 60.990 63.158 9.46 0.00 46.67 4.00
3034 5851 0.686441 CCCACCGGACAGATCCAGTA 60.686 60.000 9.46 0.00 46.67 2.74
3035 5852 1.191535 CCACCGGACAGATCCAGTAA 58.808 55.000 9.46 0.00 46.67 2.24
3036 5853 1.134788 CCACCGGACAGATCCAGTAAC 60.135 57.143 9.46 0.00 46.67 2.50
3037 5854 1.134788 CACCGGACAGATCCAGTAACC 60.135 57.143 9.46 0.00 46.67 2.85
3038 5855 1.191535 CCGGACAGATCCAGTAACCA 58.808 55.000 0.00 0.00 46.67 3.67
3039 5856 1.553248 CCGGACAGATCCAGTAACCAA 59.447 52.381 0.00 0.00 46.67 3.67
3040 5857 2.027561 CCGGACAGATCCAGTAACCAAA 60.028 50.000 0.00 0.00 46.67 3.28
3041 5858 3.000727 CGGACAGATCCAGTAACCAAAC 58.999 50.000 0.00 0.00 46.67 2.93
3042 5859 3.000727 GGACAGATCCAGTAACCAAACG 58.999 50.000 0.00 0.00 45.47 3.60
3043 5860 2.415512 GACAGATCCAGTAACCAAACGC 59.584 50.000 0.00 0.00 0.00 4.84
3044 5861 2.038557 ACAGATCCAGTAACCAAACGCT 59.961 45.455 0.00 0.00 0.00 5.07
3045 5862 2.673368 CAGATCCAGTAACCAAACGCTC 59.327 50.000 0.00 0.00 0.00 5.03
3046 5863 2.007608 GATCCAGTAACCAAACGCTCC 58.992 52.381 0.00 0.00 0.00 4.70
3047 5864 0.035739 TCCAGTAACCAAACGCTCCC 59.964 55.000 0.00 0.00 0.00 4.30
3048 5865 0.036306 CCAGTAACCAAACGCTCCCT 59.964 55.000 0.00 0.00 0.00 4.20
3049 5866 1.156736 CAGTAACCAAACGCTCCCTG 58.843 55.000 0.00 0.00 0.00 4.45
3050 5867 0.036306 AGTAACCAAACGCTCCCTGG 59.964 55.000 0.00 0.00 36.24 4.45
3051 5868 1.302993 TAACCAAACGCTCCCTGGC 60.303 57.895 0.00 0.00 33.19 4.85
3052 5869 2.757980 TAACCAAACGCTCCCTGGCC 62.758 60.000 0.00 0.00 33.19 5.36
3053 5870 4.351054 CCAAACGCTCCCTGGCCT 62.351 66.667 3.32 0.00 0.00 5.19
3054 5871 2.747855 CAAACGCTCCCTGGCCTC 60.748 66.667 3.32 0.00 0.00 4.70
3055 5872 4.035102 AAACGCTCCCTGGCCTCC 62.035 66.667 3.32 0.00 0.00 4.30
3070 5887 1.803943 CTCCGTCGGAGTGAGAAGG 59.196 63.158 29.66 5.84 44.25 3.46
3071 5888 1.658686 CTCCGTCGGAGTGAGAAGGG 61.659 65.000 29.66 5.10 44.25 3.95
3072 5889 1.677966 CCGTCGGAGTGAGAAGGGA 60.678 63.158 4.91 0.00 34.35 4.20
3073 5890 1.507174 CGTCGGAGTGAGAAGGGAC 59.493 63.158 0.00 0.00 0.00 4.46
3074 5891 1.891616 GTCGGAGTGAGAAGGGACC 59.108 63.158 0.00 0.00 0.00 4.46
3075 5892 0.898789 GTCGGAGTGAGAAGGGACCA 60.899 60.000 0.00 0.00 0.00 4.02
3076 5893 0.898789 TCGGAGTGAGAAGGGACCAC 60.899 60.000 0.00 0.00 0.00 4.16
3077 5894 1.185618 CGGAGTGAGAAGGGACCACA 61.186 60.000 0.00 0.00 33.53 4.17
3078 5895 1.280457 GGAGTGAGAAGGGACCACAT 58.720 55.000 0.00 0.00 33.53 3.21
3079 5896 2.467880 GGAGTGAGAAGGGACCACATA 58.532 52.381 0.00 0.00 33.53 2.29
3080 5897 2.168728 GGAGTGAGAAGGGACCACATAC 59.831 54.545 0.00 0.00 33.53 2.39
3081 5898 1.825474 AGTGAGAAGGGACCACATACG 59.175 52.381 0.00 0.00 33.53 3.06
3082 5899 1.134788 GTGAGAAGGGACCACATACGG 60.135 57.143 0.00 0.00 0.00 4.02
3083 5900 1.272816 TGAGAAGGGACCACATACGGA 60.273 52.381 0.00 0.00 0.00 4.69
3084 5901 2.040178 GAGAAGGGACCACATACGGAT 58.960 52.381 0.00 0.00 0.00 4.18
3085 5902 2.036089 GAGAAGGGACCACATACGGATC 59.964 54.545 0.00 0.00 0.00 3.36
3086 5903 1.760613 GAAGGGACCACATACGGATCA 59.239 52.381 0.00 0.00 0.00 2.92
3087 5904 1.414158 AGGGACCACATACGGATCAG 58.586 55.000 0.00 0.00 0.00 2.90
3088 5905 0.249911 GGGACCACATACGGATCAGC 60.250 60.000 0.00 0.00 0.00 4.26
3089 5906 0.597637 GGACCACATACGGATCAGCG 60.598 60.000 0.00 0.00 0.00 5.18
3090 5907 1.215655 GACCACATACGGATCAGCGC 61.216 60.000 0.00 0.00 0.00 5.92
3091 5908 1.227234 CCACATACGGATCAGCGCA 60.227 57.895 11.47 0.00 0.00 6.09
3092 5909 1.217585 CCACATACGGATCAGCGCAG 61.218 60.000 11.47 0.00 0.00 5.18
3093 5910 0.528466 CACATACGGATCAGCGCAGT 60.528 55.000 11.47 1.89 0.00 4.40
3094 5911 1.029681 ACATACGGATCAGCGCAGTA 58.970 50.000 11.47 4.28 0.00 2.74
3095 5912 1.001268 ACATACGGATCAGCGCAGTAG 60.001 52.381 11.47 0.00 0.00 2.57
3096 5913 0.039074 ATACGGATCAGCGCAGTAGC 60.039 55.000 11.47 0.00 37.42 3.58
3097 5914 1.381165 TACGGATCAGCGCAGTAGCA 61.381 55.000 11.47 0.00 42.27 3.49
3098 5915 1.300465 CGGATCAGCGCAGTAGCAT 60.300 57.895 11.47 0.00 42.27 3.79
3099 5916 1.554891 CGGATCAGCGCAGTAGCATG 61.555 60.000 11.47 0.00 42.27 4.06
3100 5917 1.226686 GGATCAGCGCAGTAGCATGG 61.227 60.000 11.47 0.00 42.27 3.66
3101 5918 0.249615 GATCAGCGCAGTAGCATGGA 60.250 55.000 11.47 0.00 42.27 3.41
3102 5919 0.178767 ATCAGCGCAGTAGCATGGAA 59.821 50.000 11.47 0.00 42.27 3.53
3103 5920 0.178767 TCAGCGCAGTAGCATGGAAT 59.821 50.000 11.47 0.00 42.27 3.01
3104 5921 1.412343 TCAGCGCAGTAGCATGGAATA 59.588 47.619 11.47 0.00 42.27 1.75
3105 5922 1.528586 CAGCGCAGTAGCATGGAATAC 59.471 52.381 11.47 0.00 42.27 1.89
3106 5923 1.138859 AGCGCAGTAGCATGGAATACA 59.861 47.619 11.47 0.00 42.27 2.29
3107 5924 1.939934 GCGCAGTAGCATGGAATACAA 59.060 47.619 0.30 0.00 42.27 2.41
3108 5925 2.286418 GCGCAGTAGCATGGAATACAAC 60.286 50.000 0.30 0.00 42.27 3.32
3109 5926 2.287915 CGCAGTAGCATGGAATACAACC 59.712 50.000 0.00 0.00 42.27 3.77
3110 5927 3.545703 GCAGTAGCATGGAATACAACCT 58.454 45.455 0.00 0.00 41.58 3.50
3111 5928 3.313526 GCAGTAGCATGGAATACAACCTG 59.686 47.826 0.00 0.00 41.58 4.00
3112 5929 3.313526 CAGTAGCATGGAATACAACCTGC 59.686 47.826 0.00 0.00 34.38 4.85
3113 5930 2.512692 AGCATGGAATACAACCTGCA 57.487 45.000 0.00 0.00 35.58 4.41
3114 5931 2.806434 AGCATGGAATACAACCTGCAA 58.194 42.857 0.00 0.00 35.58 4.08
3115 5932 3.164268 AGCATGGAATACAACCTGCAAA 58.836 40.909 0.00 0.00 35.58 3.68
3116 5933 3.577848 AGCATGGAATACAACCTGCAAAA 59.422 39.130 0.00 0.00 35.58 2.44
3117 5934 4.040217 AGCATGGAATACAACCTGCAAAAA 59.960 37.500 0.00 0.00 35.58 1.94
3157 5974 8.592105 TTCTGTTAAAAGCCAAATCATTTCTG 57.408 30.769 0.00 0.00 0.00 3.02
3158 5975 6.646240 TCTGTTAAAAGCCAAATCATTTCTGC 59.354 34.615 0.00 0.00 0.00 4.26
3159 5976 6.286758 TGTTAAAAGCCAAATCATTTCTGCA 58.713 32.000 4.42 0.00 0.00 4.41
3160 5977 6.424509 TGTTAAAAGCCAAATCATTTCTGCAG 59.575 34.615 7.63 7.63 0.00 4.41
3161 5978 4.612264 AAAGCCAAATCATTTCTGCAGT 57.388 36.364 14.67 0.00 0.00 4.40
3162 5979 4.612264 AAGCCAAATCATTTCTGCAGTT 57.388 36.364 14.67 0.00 0.00 3.16
3163 5980 4.184079 AGCCAAATCATTTCTGCAGTTC 57.816 40.909 14.67 0.00 0.00 3.01
3164 5981 3.056322 AGCCAAATCATTTCTGCAGTTCC 60.056 43.478 14.67 0.00 0.00 3.62
3165 5982 3.306225 GCCAAATCATTTCTGCAGTTCCA 60.306 43.478 14.67 0.00 0.00 3.53
3166 5983 4.800249 GCCAAATCATTTCTGCAGTTCCAA 60.800 41.667 14.67 3.33 0.00 3.53
3167 5984 5.299148 CCAAATCATTTCTGCAGTTCCAAA 58.701 37.500 14.67 7.20 0.00 3.28
3168 5985 5.935789 CCAAATCATTTCTGCAGTTCCAAAT 59.064 36.000 14.67 9.34 0.00 2.32
3169 5986 6.428771 CCAAATCATTTCTGCAGTTCCAAATT 59.571 34.615 14.67 5.52 0.00 1.82
3170 5987 7.295201 CAAATCATTTCTGCAGTTCCAAATTG 58.705 34.615 14.67 9.39 0.00 2.32
3171 5988 4.309099 TCATTTCTGCAGTTCCAAATTGC 58.691 39.130 14.67 0.74 43.58 3.56
3172 5989 2.818130 TTCTGCAGTTCCAAATTGCC 57.182 45.000 14.67 0.00 42.75 4.52
3173 5990 0.968405 TCTGCAGTTCCAAATTGCCC 59.032 50.000 14.67 0.00 42.75 5.36
3174 5991 0.680618 CTGCAGTTCCAAATTGCCCA 59.319 50.000 5.25 0.00 42.75 5.36
3175 5992 1.276989 CTGCAGTTCCAAATTGCCCAT 59.723 47.619 5.25 0.00 42.75 4.00
3176 5993 2.496871 CTGCAGTTCCAAATTGCCCATA 59.503 45.455 5.25 0.00 42.75 2.74
3177 5994 2.902486 TGCAGTTCCAAATTGCCCATAA 59.098 40.909 4.96 0.00 42.75 1.90
3178 5995 3.261580 GCAGTTCCAAATTGCCCATAAC 58.738 45.455 0.00 0.00 38.08 1.89
3179 5996 3.306641 GCAGTTCCAAATTGCCCATAACA 60.307 43.478 0.00 0.00 38.08 2.41
3180 5997 4.802248 GCAGTTCCAAATTGCCCATAACAA 60.802 41.667 0.00 0.00 38.08 2.83
3181 5998 5.490159 CAGTTCCAAATTGCCCATAACAAT 58.510 37.500 0.00 0.00 39.38 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 1091 8.288208 GGTGATGCTCATAACTGAAATCTTATG 58.712 37.037 0.00 0.00 33.37 1.90
111 1092 7.172190 CGGTGATGCTCATAACTGAAATCTTAT 59.828 37.037 0.69 0.00 31.35 1.73
132 1113 4.533815 AGGAGTAGTATCAATGTCGGTGA 58.466 43.478 0.00 0.00 0.00 4.02
158 1139 7.065923 AGGCTAGAAAGACAAATATTTCGGAAC 59.934 37.037 0.00 0.00 40.33 3.62
159 1140 7.110155 AGGCTAGAAAGACAAATATTTCGGAA 58.890 34.615 0.00 0.00 40.33 4.30
160 1141 6.650120 AGGCTAGAAAGACAAATATTTCGGA 58.350 36.000 0.00 0.00 40.33 4.55
161 1142 6.927294 AGGCTAGAAAGACAAATATTTCGG 57.073 37.500 0.00 0.00 40.33 4.30
162 1143 8.202745 AGAAGGCTAGAAAGACAAATATTTCG 57.797 34.615 0.00 0.00 40.33 3.46
163 1144 9.167311 TGAGAAGGCTAGAAAGACAAATATTTC 57.833 33.333 0.00 0.00 36.47 2.17
164 1145 9.520515 TTGAGAAGGCTAGAAAGACAAATATTT 57.479 29.630 0.00 0.00 30.50 1.40
165 1146 9.520515 TTTGAGAAGGCTAGAAAGACAAATATT 57.479 29.630 0.00 0.00 30.50 1.28
166 1147 9.692325 ATTTGAGAAGGCTAGAAAGACAAATAT 57.308 29.630 0.00 0.00 34.96 1.28
167 1148 8.950210 CATTTGAGAAGGCTAGAAAGACAAATA 58.050 33.333 0.00 0.00 34.96 1.40
168 1149 7.094032 CCATTTGAGAAGGCTAGAAAGACAAAT 60.094 37.037 0.00 0.00 36.38 2.32
169 1150 6.207417 CCATTTGAGAAGGCTAGAAAGACAAA 59.793 38.462 0.00 0.00 30.50 2.83
170 1151 5.707298 CCATTTGAGAAGGCTAGAAAGACAA 59.293 40.000 0.00 0.00 30.50 3.18
171 1152 5.013079 TCCATTTGAGAAGGCTAGAAAGACA 59.987 40.000 0.00 0.00 30.50 3.41
172 1153 5.352846 GTCCATTTGAGAAGGCTAGAAAGAC 59.647 44.000 0.00 0.00 0.00 3.01
173 1154 5.249393 AGTCCATTTGAGAAGGCTAGAAAGA 59.751 40.000 0.00 0.00 0.00 2.52
174 1155 5.495640 AGTCCATTTGAGAAGGCTAGAAAG 58.504 41.667 0.00 0.00 0.00 2.62
175 1156 5.505181 AGTCCATTTGAGAAGGCTAGAAA 57.495 39.130 0.00 0.00 0.00 2.52
176 1157 5.483937 TGTAGTCCATTTGAGAAGGCTAGAA 59.516 40.000 0.00 0.00 0.00 2.10
177 1158 5.023452 TGTAGTCCATTTGAGAAGGCTAGA 58.977 41.667 0.00 0.00 0.00 2.43
178 1159 5.344743 TGTAGTCCATTTGAGAAGGCTAG 57.655 43.478 0.00 0.00 0.00 3.42
179 1160 5.012664 TGTTGTAGTCCATTTGAGAAGGCTA 59.987 40.000 0.00 0.00 0.00 3.93
180 1161 4.202461 TGTTGTAGTCCATTTGAGAAGGCT 60.202 41.667 0.00 0.00 0.00 4.58
181 1162 4.072131 TGTTGTAGTCCATTTGAGAAGGC 58.928 43.478 0.00 0.00 0.00 4.35
182 1163 6.036083 CGTATGTTGTAGTCCATTTGAGAAGG 59.964 42.308 0.00 0.00 0.00 3.46
183 1164 6.036083 CCGTATGTTGTAGTCCATTTGAGAAG 59.964 42.308 0.00 0.00 0.00 2.85
184 1165 5.872617 CCGTATGTTGTAGTCCATTTGAGAA 59.127 40.000 0.00 0.00 0.00 2.87
185 1166 5.186215 TCCGTATGTTGTAGTCCATTTGAGA 59.814 40.000 0.00 0.00 0.00 3.27
186 1167 5.416083 TCCGTATGTTGTAGTCCATTTGAG 58.584 41.667 0.00 0.00 0.00 3.02
187 1168 5.408880 TCCGTATGTTGTAGTCCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
188 1169 5.584649 ACATCCGTATGTTGTAGTCCATTTG 59.415 40.000 0.00 0.00 44.07 2.32
189 1170 5.741011 ACATCCGTATGTTGTAGTCCATTT 58.259 37.500 0.00 0.00 44.07 2.32
190 1171 5.353394 ACATCCGTATGTTGTAGTCCATT 57.647 39.130 0.00 0.00 44.07 3.16
191 1172 6.455647 CATACATCCGTATGTTGTAGTCCAT 58.544 40.000 0.00 0.00 46.70 3.41
192 1173 5.838529 CATACATCCGTATGTTGTAGTCCA 58.161 41.667 0.00 0.00 46.70 4.02
203 1184 9.692749 CTAAAACATGTCTACATACATCCGTAT 57.307 33.333 0.00 0.00 38.01 3.06
204 1185 8.905850 TCTAAAACATGTCTACATACATCCGTA 58.094 33.333 0.00 0.00 38.01 4.02
205 1186 7.778083 TCTAAAACATGTCTACATACATCCGT 58.222 34.615 0.00 0.00 38.01 4.69
206 1187 7.921214 ACTCTAAAACATGTCTACATACATCCG 59.079 37.037 0.00 0.00 38.01 4.18
207 1188 9.035607 CACTCTAAAACATGTCTACATACATCC 57.964 37.037 0.00 0.00 38.01 3.51
208 1189 9.587772 ACACTCTAAAACATGTCTACATACATC 57.412 33.333 0.00 0.00 38.01 3.06
214 1195 9.856488 GAATCTACACTCTAAAACATGTCTACA 57.144 33.333 0.00 0.00 0.00 2.74
215 1196 9.856488 TGAATCTACACTCTAAAACATGTCTAC 57.144 33.333 0.00 0.00 0.00 2.59
216 1197 9.856488 GTGAATCTACACTCTAAAACATGTCTA 57.144 33.333 0.00 0.00 37.73 2.59
217 1198 8.589338 AGTGAATCTACACTCTAAAACATGTCT 58.411 33.333 0.00 0.00 46.36 3.41
218 1199 8.764524 AGTGAATCTACACTCTAAAACATGTC 57.235 34.615 0.00 0.00 46.36 3.06
231 1212 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
232 1213 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
233 1214 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
234 1215 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
235 1216 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
236 1217 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
237 1218 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
238 1219 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
239 1220 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
240 1221 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
241 1222 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
242 1223 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
243 1224 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
244 1225 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
245 1226 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
246 1227 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
247 1228 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
248 1229 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
249 1230 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
250 1231 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
251 1232 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
252 1233 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
253 1234 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
254 1235 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
255 1236 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
257 1238 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
258 1239 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
259 1240 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
260 1241 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
261 1242 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
262 1243 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
263 1244 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
264 1245 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
265 1246 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
281 1262 9.379791 CCTACGTTCCTAAATAATTGTCTTTCT 57.620 33.333 0.00 0.00 0.00 2.52
282 1263 8.610035 CCCTACGTTCCTAAATAATTGTCTTTC 58.390 37.037 0.00 0.00 0.00 2.62
283 1264 8.323567 TCCCTACGTTCCTAAATAATTGTCTTT 58.676 33.333 0.00 0.00 0.00 2.52
284 1265 7.854337 TCCCTACGTTCCTAAATAATTGTCTT 58.146 34.615 0.00 0.00 0.00 3.01
285 1266 7.125356 ACTCCCTACGTTCCTAAATAATTGTCT 59.875 37.037 0.00 0.00 0.00 3.41
286 1267 7.270779 ACTCCCTACGTTCCTAAATAATTGTC 58.729 38.462 0.00 0.00 0.00 3.18
287 1268 7.191593 ACTCCCTACGTTCCTAAATAATTGT 57.808 36.000 0.00 0.00 0.00 2.71
288 1269 8.636213 TCTACTCCCTACGTTCCTAAATAATTG 58.364 37.037 0.00 0.00 0.00 2.32
289 1270 8.773033 TCTACTCCCTACGTTCCTAAATAATT 57.227 34.615 0.00 0.00 0.00 1.40
290 1271 8.773033 TTCTACTCCCTACGTTCCTAAATAAT 57.227 34.615 0.00 0.00 0.00 1.28
291 1272 8.593945 TTTCTACTCCCTACGTTCCTAAATAA 57.406 34.615 0.00 0.00 0.00 1.40
292 1273 8.593945 TTTTCTACTCCCTACGTTCCTAAATA 57.406 34.615 0.00 0.00 0.00 1.40
293 1274 7.398332 TCTTTTCTACTCCCTACGTTCCTAAAT 59.602 37.037 0.00 0.00 0.00 1.40
294 1275 6.721208 TCTTTTCTACTCCCTACGTTCCTAAA 59.279 38.462 0.00 0.00 0.00 1.85
295 1276 6.248433 TCTTTTCTACTCCCTACGTTCCTAA 58.752 40.000 0.00 0.00 0.00 2.69
296 1277 5.819991 TCTTTTCTACTCCCTACGTTCCTA 58.180 41.667 0.00 0.00 0.00 2.94
297 1278 4.670765 TCTTTTCTACTCCCTACGTTCCT 58.329 43.478 0.00 0.00 0.00 3.36
298 1279 5.397142 TTCTTTTCTACTCCCTACGTTCC 57.603 43.478 0.00 0.00 0.00 3.62
299 1280 4.863689 GCTTCTTTTCTACTCCCTACGTTC 59.136 45.833 0.00 0.00 0.00 3.95
300 1281 4.322574 GGCTTCTTTTCTACTCCCTACGTT 60.323 45.833 0.00 0.00 0.00 3.99
301 1282 3.195182 GGCTTCTTTTCTACTCCCTACGT 59.805 47.826 0.00 0.00 0.00 3.57
302 1283 3.194968 TGGCTTCTTTTCTACTCCCTACG 59.805 47.826 0.00 0.00 0.00 3.51
303 1284 4.505808 GTGGCTTCTTTTCTACTCCCTAC 58.494 47.826 0.00 0.00 0.00 3.18
304 1285 3.518303 GGTGGCTTCTTTTCTACTCCCTA 59.482 47.826 0.00 0.00 0.00 3.53
305 1286 2.306219 GGTGGCTTCTTTTCTACTCCCT 59.694 50.000 0.00 0.00 0.00 4.20
306 1287 2.039879 TGGTGGCTTCTTTTCTACTCCC 59.960 50.000 0.00 0.00 0.00 4.30
307 1288 3.418684 TGGTGGCTTCTTTTCTACTCC 57.581 47.619 0.00 0.00 0.00 3.85
308 1289 6.174049 ACTAATGGTGGCTTCTTTTCTACTC 58.826 40.000 0.00 0.00 0.00 2.59
309 1290 6.128138 ACTAATGGTGGCTTCTTTTCTACT 57.872 37.500 0.00 0.00 0.00 2.57
440 1448 2.435437 TGATGCACCTATCAGCTAGCAA 59.565 45.455 18.83 4.71 35.45 3.91
460 1468 6.016527 ACTCTGTAATCAAATAGCCATGCATG 60.017 38.462 20.19 20.19 0.00 4.06
489 1532 9.888878 CTATGCTTGTTTTCATCACATTATAGG 57.111 33.333 0.00 0.00 0.00 2.57
494 1537 6.810182 GCTTCTATGCTTGTTTTCATCACATT 59.190 34.615 0.00 0.00 0.00 2.71
531 1579 8.784043 GTCTGTGATGAATACAAGGTTAAAAGT 58.216 33.333 0.00 0.00 0.00 2.66
533 1581 8.918202 AGTCTGTGATGAATACAAGGTTAAAA 57.082 30.769 0.00 0.00 0.00 1.52
554 1603 7.520614 GCAAGTATTTACTGCAAGAACAAGTCT 60.521 37.037 0.00 0.00 35.68 3.24
558 1607 6.384258 TGCAAGTATTTACTGCAAGAACAA 57.616 33.333 10.41 0.00 37.38 2.83
580 1629 9.525007 GATTCGGCGTACTATTTAAATGTAATG 57.475 33.333 11.05 8.25 0.00 1.90
601 1653 4.984785 ACCATTCATACACTCATCGATTCG 59.015 41.667 0.00 0.00 0.00 3.34
607 1659 4.051922 GACGGACCATTCATACACTCATC 58.948 47.826 0.00 0.00 0.00 2.92
743 1819 4.582701 AGATTTTTGCAATTGTCGTCCA 57.417 36.364 7.40 0.00 0.00 4.02
787 1864 3.069289 GGAAAAAGCAGCCAAAATCCAG 58.931 45.455 0.00 0.00 0.00 3.86
849 1982 8.023050 AGAGATAATGCGATCCTTTAAATTCG 57.977 34.615 9.65 9.65 34.83 3.34
864 2003 4.096833 TGGCACATGTCAAAGAGATAATGC 59.903 41.667 0.00 0.00 34.70 3.56
900 2039 4.458989 CCACTAAATTCAACTTAGCCAGCA 59.541 41.667 0.00 0.00 30.79 4.41
996 2142 6.597672 TCATGTGGCTTATTTTCGTCATAGTT 59.402 34.615 0.00 0.00 0.00 2.24
1010 2156 0.981183 AAGGACGGTCATGTGGCTTA 59.019 50.000 10.76 0.00 0.00 3.09
1155 2301 3.800685 CTGGTGGCGACGGTTGTCA 62.801 63.158 0.00 0.00 45.80 3.58
1254 2400 2.168521 CCAGAGCTTTTGATCGGAGGTA 59.831 50.000 0.00 0.00 40.27 3.08
1425 2571 1.335132 TGTAGATGCCGGAACCCTCC 61.335 60.000 5.05 0.00 38.52 4.30
1458 2610 2.692824 CCCAGATGGATGGTGCCCA 61.693 63.158 0.00 0.00 38.81 5.36
1879 3031 4.933330 GATGTCTTCATCGCTACCAAGTA 58.067 43.478 0.00 0.00 40.55 2.24
2402 3588 3.124636 GTGCCATTCACACTACTTAACGG 59.875 47.826 0.00 0.00 44.98 4.44
2472 3658 3.845781 ACTAGCATGAATTCATCCCGT 57.154 42.857 18.16 6.99 33.61 5.28
2512 3698 3.220110 CAATGATGCTAGATGGCCTGTT 58.780 45.455 3.32 0.00 0.00 3.16
2621 5437 4.334481 CCGAACTACCATTCCAACAATACC 59.666 45.833 0.00 0.00 0.00 2.73
2623 5439 5.423704 TCCGAACTACCATTCCAACAATA 57.576 39.130 0.00 0.00 0.00 1.90
2624 5440 4.295141 TCCGAACTACCATTCCAACAAT 57.705 40.909 0.00 0.00 0.00 2.71
2717 5534 0.953471 CGGGTGCCACGAGAAATTCA 60.953 55.000 0.00 0.00 0.00 2.57
2761 5578 2.589720 GGAGTCCCCCTTTTCGAAAAA 58.410 47.619 22.67 6.34 0.00 1.94
2762 5579 2.281539 GGAGTCCCCCTTTTCGAAAA 57.718 50.000 21.35 21.35 0.00 2.29
2778 5595 4.247380 GATGCAGAGGCCGGGGAG 62.247 72.222 2.18 0.00 40.13 4.30
2780 5597 4.559063 CTGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
2781 5598 3.035173 TTCTGATGCAGAGGCCGGG 62.035 63.158 2.18 0.00 41.75 5.73
2782 5599 1.817099 GTTCTGATGCAGAGGCCGG 60.817 63.158 0.00 0.00 41.75 6.13
2783 5600 2.169789 CGTTCTGATGCAGAGGCCG 61.170 63.158 0.00 0.00 41.75 6.13
2784 5601 0.179062 ATCGTTCTGATGCAGAGGCC 60.179 55.000 0.00 0.00 41.75 5.19
2785 5602 3.376218 ATCGTTCTGATGCAGAGGC 57.624 52.632 0.00 0.00 41.75 4.70
2793 5610 1.502231 GCCGTATGCATCGTTCTGAT 58.498 50.000 0.19 0.00 40.77 2.90
2794 5611 0.529773 GGCCGTATGCATCGTTCTGA 60.530 55.000 0.19 0.00 43.89 3.27
2795 5612 0.809636 TGGCCGTATGCATCGTTCTG 60.810 55.000 0.19 0.00 43.89 3.02
2796 5613 0.810031 GTGGCCGTATGCATCGTTCT 60.810 55.000 0.19 0.00 43.89 3.01
2797 5614 0.810031 AGTGGCCGTATGCATCGTTC 60.810 55.000 0.19 2.49 43.89 3.95
2798 5615 0.392461 AAGTGGCCGTATGCATCGTT 60.392 50.000 0.19 0.00 43.89 3.85
2799 5616 0.462375 TAAGTGGCCGTATGCATCGT 59.538 50.000 0.19 0.00 43.89 3.73
2800 5617 1.139989 CTAAGTGGCCGTATGCATCG 58.860 55.000 0.19 7.03 43.89 3.84
2801 5618 2.526304 TCTAAGTGGCCGTATGCATC 57.474 50.000 0.19 0.00 43.89 3.91
2802 5619 4.617253 TTATCTAAGTGGCCGTATGCAT 57.383 40.909 3.79 3.79 43.89 3.96
2803 5620 4.409718 TTTATCTAAGTGGCCGTATGCA 57.590 40.909 0.00 0.00 43.89 3.96
2804 5621 7.429636 TTTATTTATCTAAGTGGCCGTATGC 57.570 36.000 0.00 0.00 40.16 3.14
2807 5624 8.842280 CCAATTTTATTTATCTAAGTGGCCGTA 58.158 33.333 0.00 0.00 0.00 4.02
2808 5625 7.340999 ACCAATTTTATTTATCTAAGTGGCCGT 59.659 33.333 0.00 0.00 0.00 5.68
2809 5626 7.712797 ACCAATTTTATTTATCTAAGTGGCCG 58.287 34.615 0.00 0.00 0.00 6.13
2810 5627 9.529325 GAACCAATTTTATTTATCTAAGTGGCC 57.471 33.333 0.00 0.00 0.00 5.36
2821 5638 9.751542 ACGACATTGTTGAACCAATTTTATTTA 57.248 25.926 11.07 0.00 32.81 1.40
2822 5639 8.655651 ACGACATTGTTGAACCAATTTTATTT 57.344 26.923 11.07 0.00 32.81 1.40
2823 5640 9.405587 CTACGACATTGTTGAACCAATTTTATT 57.594 29.630 11.07 0.00 32.81 1.40
2824 5641 8.788806 TCTACGACATTGTTGAACCAATTTTAT 58.211 29.630 11.07 0.00 32.81 1.40
2825 5642 8.155821 TCTACGACATTGTTGAACCAATTTTA 57.844 30.769 11.07 0.00 32.81 1.52
2826 5643 7.033530 TCTACGACATTGTTGAACCAATTTT 57.966 32.000 11.07 0.00 32.81 1.82
2827 5644 6.262273 ACTCTACGACATTGTTGAACCAATTT 59.738 34.615 11.07 0.00 32.81 1.82
2828 5645 5.763204 ACTCTACGACATTGTTGAACCAATT 59.237 36.000 11.07 0.00 32.81 2.32
2829 5646 5.305585 ACTCTACGACATTGTTGAACCAAT 58.694 37.500 11.07 0.00 35.45 3.16
2830 5647 4.699637 ACTCTACGACATTGTTGAACCAA 58.300 39.130 11.07 0.00 0.00 3.67
2831 5648 4.304110 GACTCTACGACATTGTTGAACCA 58.696 43.478 11.07 0.00 0.00 3.67
2832 5649 3.364023 CGACTCTACGACATTGTTGAACC 59.636 47.826 11.07 0.00 35.09 3.62
2833 5650 3.979495 ACGACTCTACGACATTGTTGAAC 59.021 43.478 11.07 0.00 37.03 3.18
2834 5651 4.233123 ACGACTCTACGACATTGTTGAA 57.767 40.909 11.07 0.00 37.03 2.69
2835 5652 3.909776 ACGACTCTACGACATTGTTGA 57.090 42.857 11.07 0.00 37.03 3.18
2836 5653 6.074729 TGTTTTACGACTCTACGACATTGTTG 60.075 38.462 2.32 2.32 37.03 3.33
2837 5654 5.978919 TGTTTTACGACTCTACGACATTGTT 59.021 36.000 0.00 0.00 37.03 2.83
2838 5655 5.522456 TGTTTTACGACTCTACGACATTGT 58.478 37.500 0.00 0.00 37.03 2.71
2839 5656 6.442487 TTGTTTTACGACTCTACGACATTG 57.558 37.500 0.00 0.00 37.03 2.82
2840 5657 7.467557 TTTTGTTTTACGACTCTACGACATT 57.532 32.000 0.00 0.00 37.03 2.71
2841 5658 7.647907 ATTTTGTTTTACGACTCTACGACAT 57.352 32.000 0.00 0.00 37.03 3.06
2842 5659 8.572828 TTATTTTGTTTTACGACTCTACGACA 57.427 30.769 0.00 0.00 37.03 4.35
2843 5660 9.508495 CTTTATTTTGTTTTACGACTCTACGAC 57.492 33.333 0.00 0.00 37.03 4.34
2844 5661 9.248291 ACTTTATTTTGTTTTACGACTCTACGA 57.752 29.630 0.00 0.00 37.03 3.43
2845 5662 9.508495 GACTTTATTTTGTTTTACGACTCTACG 57.492 33.333 0.00 0.00 39.31 3.51
2846 5663 9.508495 CGACTTTATTTTGTTTTACGACTCTAC 57.492 33.333 0.00 0.00 0.00 2.59
2847 5664 9.462174 TCGACTTTATTTTGTTTTACGACTCTA 57.538 29.630 0.00 0.00 0.00 2.43
2848 5665 8.356533 TCGACTTTATTTTGTTTTACGACTCT 57.643 30.769 0.00 0.00 0.00 3.24
2849 5666 7.265705 GCTCGACTTTATTTTGTTTTACGACTC 59.734 37.037 0.00 0.00 0.00 3.36
2850 5667 7.042254 AGCTCGACTTTATTTTGTTTTACGACT 60.042 33.333 0.00 0.00 0.00 4.18
2851 5668 7.067728 AGCTCGACTTTATTTTGTTTTACGAC 58.932 34.615 0.00 0.00 0.00 4.34
2852 5669 7.042590 TGAGCTCGACTTTATTTTGTTTTACGA 60.043 33.333 9.64 0.00 0.00 3.43
2853 5670 7.058016 GTGAGCTCGACTTTATTTTGTTTTACG 59.942 37.037 9.64 0.00 0.00 3.18
2854 5671 7.853929 TGTGAGCTCGACTTTATTTTGTTTTAC 59.146 33.333 9.64 0.00 0.00 2.01
2855 5672 7.921787 TGTGAGCTCGACTTTATTTTGTTTTA 58.078 30.769 9.64 0.00 0.00 1.52
2856 5673 6.791303 TGTGAGCTCGACTTTATTTTGTTTT 58.209 32.000 9.64 0.00 0.00 2.43
2857 5674 6.371809 TGTGAGCTCGACTTTATTTTGTTT 57.628 33.333 9.64 0.00 0.00 2.83
2858 5675 6.560253 ATGTGAGCTCGACTTTATTTTGTT 57.440 33.333 9.64 0.00 0.00 2.83
2859 5676 7.063544 GTCTATGTGAGCTCGACTTTATTTTGT 59.936 37.037 9.64 0.00 0.00 2.83
2860 5677 7.394872 GTCTATGTGAGCTCGACTTTATTTTG 58.605 38.462 9.64 0.00 0.00 2.44
2861 5678 6.535508 GGTCTATGTGAGCTCGACTTTATTTT 59.464 38.462 9.64 0.00 39.86 1.82
2862 5679 6.043411 GGTCTATGTGAGCTCGACTTTATTT 58.957 40.000 9.64 0.00 39.86 1.40
2863 5680 5.593010 GGTCTATGTGAGCTCGACTTTATT 58.407 41.667 9.64 0.00 39.86 1.40
2864 5681 5.189659 GGTCTATGTGAGCTCGACTTTAT 57.810 43.478 9.64 1.87 39.86 1.40
2865 5682 4.634184 GGTCTATGTGAGCTCGACTTTA 57.366 45.455 9.64 4.81 39.86 1.85
2866 5683 3.512033 GGTCTATGTGAGCTCGACTTT 57.488 47.619 9.64 3.98 39.86 2.66
2874 5691 0.592754 GCGTCGAGGTCTATGTGAGC 60.593 60.000 7.01 0.00 43.05 4.26
2875 5692 1.018148 AGCGTCGAGGTCTATGTGAG 58.982 55.000 7.01 0.00 0.00 3.51
2876 5693 2.320745 TAGCGTCGAGGTCTATGTGA 57.679 50.000 7.01 0.00 0.00 3.58
2877 5694 3.416119 TTTAGCGTCGAGGTCTATGTG 57.584 47.619 7.01 0.00 0.00 3.21
2878 5695 3.192001 TGTTTTAGCGTCGAGGTCTATGT 59.808 43.478 7.01 0.00 0.00 2.29
2879 5696 3.766151 TGTTTTAGCGTCGAGGTCTATG 58.234 45.455 7.01 0.00 0.00 2.23
2880 5697 3.693085 TCTGTTTTAGCGTCGAGGTCTAT 59.307 43.478 7.01 0.00 0.00 1.98
2881 5698 3.076621 TCTGTTTTAGCGTCGAGGTCTA 58.923 45.455 7.01 6.14 0.00 2.59
2882 5699 1.884579 TCTGTTTTAGCGTCGAGGTCT 59.115 47.619 7.01 7.08 0.00 3.85
2883 5700 2.342910 TCTGTTTTAGCGTCGAGGTC 57.657 50.000 7.01 0.00 0.00 3.85
2884 5701 2.806608 TTCTGTTTTAGCGTCGAGGT 57.193 45.000 7.01 0.00 0.00 3.85
2885 5702 4.455124 CTTTTTCTGTTTTAGCGTCGAGG 58.545 43.478 0.00 0.00 0.00 4.63
2886 5703 4.455124 CCTTTTTCTGTTTTAGCGTCGAG 58.545 43.478 0.00 0.00 0.00 4.04
2887 5704 3.303526 GCCTTTTTCTGTTTTAGCGTCGA 60.304 43.478 0.00 0.00 0.00 4.20
2888 5705 2.971261 GCCTTTTTCTGTTTTAGCGTCG 59.029 45.455 0.00 0.00 0.00 5.12
2889 5706 3.243267 TGGCCTTTTTCTGTTTTAGCGTC 60.243 43.478 3.32 0.00 0.00 5.19
2890 5707 2.691011 TGGCCTTTTTCTGTTTTAGCGT 59.309 40.909 3.32 0.00 0.00 5.07
2891 5708 3.363341 TGGCCTTTTTCTGTTTTAGCG 57.637 42.857 3.32 0.00 0.00 4.26
2892 5709 6.128553 GCTTTATGGCCTTTTTCTGTTTTAGC 60.129 38.462 3.32 0.00 0.00 3.09
2893 5710 7.351414 GCTTTATGGCCTTTTTCTGTTTTAG 57.649 36.000 3.32 0.00 0.00 1.85
2908 5725 1.510844 CCGGTTGTGGCTTTATGGC 59.489 57.895 0.00 0.00 42.18 4.40
2917 5734 1.037030 ATTATGCCAGCCGGTTGTGG 61.037 55.000 17.69 15.43 36.85 4.17
2918 5735 1.674359 TATTATGCCAGCCGGTTGTG 58.326 50.000 17.69 9.73 33.28 3.33
2919 5736 2.428544 TTATTATGCCAGCCGGTTGT 57.571 45.000 17.69 1.06 33.28 3.32
2920 5737 2.948979 TCTTTATTATGCCAGCCGGTTG 59.051 45.455 11.98 11.98 33.28 3.77
2921 5738 3.290948 TCTTTATTATGCCAGCCGGTT 57.709 42.857 1.90 0.00 33.28 4.44
2922 5739 3.508845 ATCTTTATTATGCCAGCCGGT 57.491 42.857 1.90 0.00 33.28 5.28
2923 5740 3.941483 CCTATCTTTATTATGCCAGCCGG 59.059 47.826 0.00 0.00 0.00 6.13
2924 5741 4.832248 TCCTATCTTTATTATGCCAGCCG 58.168 43.478 0.00 0.00 0.00 5.52
2925 5742 7.231519 AGTTTTCCTATCTTTATTATGCCAGCC 59.768 37.037 0.00 0.00 0.00 4.85
2926 5743 8.171164 AGTTTTCCTATCTTTATTATGCCAGC 57.829 34.615 0.00 0.00 0.00 4.85
2943 5760 9.794719 GTAATAGGATAGGCAATTAGTTTTCCT 57.205 33.333 0.00 0.00 36.39 3.36
2944 5761 9.569122 TGTAATAGGATAGGCAATTAGTTTTCC 57.431 33.333 0.00 0.00 0.00 3.13
2948 5765 9.726438 GTCATGTAATAGGATAGGCAATTAGTT 57.274 33.333 0.00 0.00 0.00 2.24
2949 5766 8.322091 GGTCATGTAATAGGATAGGCAATTAGT 58.678 37.037 0.00 0.00 0.00 2.24
2950 5767 7.492669 CGGTCATGTAATAGGATAGGCAATTAG 59.507 40.741 0.00 0.00 0.00 1.73
2951 5768 7.327975 CGGTCATGTAATAGGATAGGCAATTA 58.672 38.462 0.00 0.00 0.00 1.40
2952 5769 6.173339 CGGTCATGTAATAGGATAGGCAATT 58.827 40.000 0.00 0.00 0.00 2.32
2953 5770 5.734720 CGGTCATGTAATAGGATAGGCAAT 58.265 41.667 0.00 0.00 0.00 3.56
2954 5771 4.562757 GCGGTCATGTAATAGGATAGGCAA 60.563 45.833 0.00 0.00 0.00 4.52
2955 5772 3.056107 GCGGTCATGTAATAGGATAGGCA 60.056 47.826 0.00 0.00 0.00 4.75
2956 5773 3.522553 GCGGTCATGTAATAGGATAGGC 58.477 50.000 0.00 0.00 0.00 3.93
2957 5774 3.513912 TGGCGGTCATGTAATAGGATAGG 59.486 47.826 0.00 0.00 0.00 2.57
2958 5775 4.801330 TGGCGGTCATGTAATAGGATAG 57.199 45.455 0.00 0.00 0.00 2.08
2959 5776 4.161565 GGATGGCGGTCATGTAATAGGATA 59.838 45.833 0.00 0.00 35.97 2.59
2960 5777 3.055094 GGATGGCGGTCATGTAATAGGAT 60.055 47.826 0.00 0.00 35.97 3.24
2961 5778 2.301870 GGATGGCGGTCATGTAATAGGA 59.698 50.000 0.00 0.00 35.97 2.94
2962 5779 2.038426 TGGATGGCGGTCATGTAATAGG 59.962 50.000 0.00 0.00 35.97 2.57
2963 5780 3.401033 TGGATGGCGGTCATGTAATAG 57.599 47.619 0.00 0.00 35.97 1.73
2964 5781 3.847671 TTGGATGGCGGTCATGTAATA 57.152 42.857 0.00 0.00 35.97 0.98
2965 5782 2.687935 GTTTGGATGGCGGTCATGTAAT 59.312 45.455 0.00 0.00 35.97 1.89
2966 5783 2.088423 GTTTGGATGGCGGTCATGTAA 58.912 47.619 0.00 0.00 35.97 2.41
2967 5784 1.680555 GGTTTGGATGGCGGTCATGTA 60.681 52.381 0.00 0.00 35.97 2.29
2968 5785 0.965363 GGTTTGGATGGCGGTCATGT 60.965 55.000 0.00 0.00 35.97 3.21
2969 5786 1.809207 GGTTTGGATGGCGGTCATG 59.191 57.895 0.00 0.00 35.97 3.07
2970 5787 1.748879 CGGTTTGGATGGCGGTCAT 60.749 57.895 0.00 0.00 39.13 3.06
2971 5788 2.359354 CGGTTTGGATGGCGGTCA 60.359 61.111 0.00 0.00 0.00 4.02
2972 5789 3.131478 CCGGTTTGGATGGCGGTC 61.131 66.667 0.00 0.00 42.00 4.79
2973 5790 3.501040 AACCGGTTTGGATGGCGGT 62.501 57.895 15.86 0.00 42.00 5.68
2974 5791 2.675075 AACCGGTTTGGATGGCGG 60.675 61.111 15.86 0.00 42.00 6.13
2975 5792 1.519751 TTCAACCGGTTTGGATGGCG 61.520 55.000 19.55 3.62 40.78 5.69
2976 5793 0.243636 CTTCAACCGGTTTGGATGGC 59.756 55.000 19.55 0.00 40.78 4.40
2977 5794 1.904287 TCTTCAACCGGTTTGGATGG 58.096 50.000 19.55 5.30 40.78 3.51
2978 5795 4.275936 GGATATCTTCAACCGGTTTGGATG 59.724 45.833 19.55 14.79 41.73 3.51
2979 5796 4.461198 GGATATCTTCAACCGGTTTGGAT 58.539 43.478 19.55 21.16 42.00 3.41
2980 5797 3.371166 GGGATATCTTCAACCGGTTTGGA 60.371 47.826 19.55 15.86 42.00 3.53
2981 5798 2.949644 GGGATATCTTCAACCGGTTTGG 59.050 50.000 19.55 7.84 46.41 3.28
2982 5799 2.612212 CGGGATATCTTCAACCGGTTTG 59.388 50.000 19.55 13.53 40.79 2.93
2983 5800 2.914059 CGGGATATCTTCAACCGGTTT 58.086 47.619 19.55 5.23 40.79 3.27
2984 5801 1.474498 GCGGGATATCTTCAACCGGTT 60.474 52.381 15.86 15.86 44.39 4.44
2985 5802 0.106149 GCGGGATATCTTCAACCGGT 59.894 55.000 16.06 0.00 44.39 5.28
2986 5803 0.944311 CGCGGGATATCTTCAACCGG 60.944 60.000 16.06 0.00 44.39 5.28
2987 5804 1.557443 GCGCGGGATATCTTCAACCG 61.557 60.000 8.83 11.64 46.78 4.44
2988 5805 0.249911 AGCGCGGGATATCTTCAACC 60.250 55.000 8.83 0.00 0.00 3.77
2989 5806 2.059541 GTAGCGCGGGATATCTTCAAC 58.940 52.381 8.83 0.00 0.00 3.18
2990 5807 1.000506 GGTAGCGCGGGATATCTTCAA 59.999 52.381 8.83 0.00 0.00 2.69
2991 5808 0.601558 GGTAGCGCGGGATATCTTCA 59.398 55.000 8.83 0.00 0.00 3.02
2992 5809 0.601558 TGGTAGCGCGGGATATCTTC 59.398 55.000 8.83 0.00 0.00 2.87
2993 5810 1.204941 GATGGTAGCGCGGGATATCTT 59.795 52.381 8.83 2.79 0.00 2.40
2994 5811 0.818296 GATGGTAGCGCGGGATATCT 59.182 55.000 8.83 0.00 0.00 1.98
2995 5812 0.818296 AGATGGTAGCGCGGGATATC 59.182 55.000 8.83 1.32 0.00 1.63
2996 5813 0.818296 GAGATGGTAGCGCGGGATAT 59.182 55.000 8.83 0.00 0.00 1.63
2997 5814 1.248785 GGAGATGGTAGCGCGGGATA 61.249 60.000 8.83 0.00 0.00 2.59
2998 5815 2.574955 GGAGATGGTAGCGCGGGAT 61.575 63.158 8.83 0.00 0.00 3.85
2999 5816 3.224324 GGAGATGGTAGCGCGGGA 61.224 66.667 8.83 0.00 0.00 5.14
3000 5817 4.301027 GGGAGATGGTAGCGCGGG 62.301 72.222 8.83 0.00 0.00 6.13
3001 5818 3.536917 TGGGAGATGGTAGCGCGG 61.537 66.667 8.83 0.00 0.00 6.46
3002 5819 2.279517 GTGGGAGATGGTAGCGCG 60.280 66.667 0.00 0.00 0.00 6.86
3003 5820 2.109181 GGTGGGAGATGGTAGCGC 59.891 66.667 0.00 0.00 0.00 5.92
3004 5821 2.417516 CGGTGGGAGATGGTAGCG 59.582 66.667 0.00 0.00 0.00 4.26
3005 5822 1.760875 TCCGGTGGGAGATGGTAGC 60.761 63.158 0.00 0.00 37.43 3.58
3006 5823 0.686441 TGTCCGGTGGGAGATGGTAG 60.686 60.000 0.00 0.00 44.97 3.18
3007 5824 0.686441 CTGTCCGGTGGGAGATGGTA 60.686 60.000 0.00 0.00 44.97 3.25
3008 5825 1.990060 CTGTCCGGTGGGAGATGGT 60.990 63.158 0.00 0.00 44.97 3.55
3009 5826 1.050988 ATCTGTCCGGTGGGAGATGG 61.051 60.000 0.00 0.00 44.97 3.51
3010 5827 0.390860 GATCTGTCCGGTGGGAGATG 59.609 60.000 0.00 0.00 44.97 2.90
3011 5828 0.760945 GGATCTGTCCGGTGGGAGAT 60.761 60.000 0.00 4.16 44.97 2.75
3012 5829 1.381327 GGATCTGTCCGGTGGGAGA 60.381 63.158 0.00 0.00 44.97 3.71
3013 5830 3.221222 GGATCTGTCCGGTGGGAG 58.779 66.667 0.00 0.00 44.97 4.30
3021 5838 3.000727 CGTTTGGTTACTGGATCTGTCC 58.999 50.000 0.00 0.00 45.31 4.02
3022 5839 2.415512 GCGTTTGGTTACTGGATCTGTC 59.584 50.000 0.00 0.00 0.00 3.51
3023 5840 2.038557 AGCGTTTGGTTACTGGATCTGT 59.961 45.455 0.00 0.00 0.00 3.41
3024 5841 2.673368 GAGCGTTTGGTTACTGGATCTG 59.327 50.000 0.00 0.00 0.00 2.90
3025 5842 2.354805 GGAGCGTTTGGTTACTGGATCT 60.355 50.000 0.00 0.00 0.00 2.75
3026 5843 2.007608 GGAGCGTTTGGTTACTGGATC 58.992 52.381 0.00 0.00 0.00 3.36
3027 5844 1.339727 GGGAGCGTTTGGTTACTGGAT 60.340 52.381 0.00 0.00 0.00 3.41
3028 5845 0.035739 GGGAGCGTTTGGTTACTGGA 59.964 55.000 0.00 0.00 0.00 3.86
3029 5846 0.036306 AGGGAGCGTTTGGTTACTGG 59.964 55.000 0.00 0.00 0.00 4.00
3030 5847 1.156736 CAGGGAGCGTTTGGTTACTG 58.843 55.000 0.00 0.00 0.00 2.74
3031 5848 0.036306 CCAGGGAGCGTTTGGTTACT 59.964 55.000 0.00 0.00 0.00 2.24
3032 5849 1.583495 GCCAGGGAGCGTTTGGTTAC 61.583 60.000 0.00 0.00 34.43 2.50
3033 5850 1.302993 GCCAGGGAGCGTTTGGTTA 60.303 57.895 0.00 0.00 34.43 2.85
3034 5851 2.597510 GCCAGGGAGCGTTTGGTT 60.598 61.111 0.00 0.00 34.43 3.67
3035 5852 4.660938 GGCCAGGGAGCGTTTGGT 62.661 66.667 0.00 0.00 34.43 3.67
3036 5853 4.351054 AGGCCAGGGAGCGTTTGG 62.351 66.667 5.01 0.00 35.06 3.28
3037 5854 2.747855 GAGGCCAGGGAGCGTTTG 60.748 66.667 5.01 0.00 0.00 2.93
3038 5855 4.035102 GGAGGCCAGGGAGCGTTT 62.035 66.667 5.01 0.00 0.00 3.60
3053 5870 1.677966 CCCTTCTCACTCCGACGGA 60.678 63.158 17.28 17.28 0.00 4.69
3054 5871 1.677966 TCCCTTCTCACTCCGACGG 60.678 63.158 7.84 7.84 0.00 4.79
3055 5872 1.507174 GTCCCTTCTCACTCCGACG 59.493 63.158 0.00 0.00 0.00 5.12
3056 5873 0.898789 TGGTCCCTTCTCACTCCGAC 60.899 60.000 0.00 0.00 0.00 4.79
3057 5874 0.898789 GTGGTCCCTTCTCACTCCGA 60.899 60.000 0.00 0.00 0.00 4.55
3058 5875 1.185618 TGTGGTCCCTTCTCACTCCG 61.186 60.000 0.00 0.00 33.04 4.63
3059 5876 1.280457 ATGTGGTCCCTTCTCACTCC 58.720 55.000 0.00 0.00 33.04 3.85
3060 5877 2.159226 CGTATGTGGTCCCTTCTCACTC 60.159 54.545 0.00 0.00 33.04 3.51
3061 5878 1.825474 CGTATGTGGTCCCTTCTCACT 59.175 52.381 0.00 0.00 33.04 3.41
3062 5879 1.134788 CCGTATGTGGTCCCTTCTCAC 60.135 57.143 0.00 0.00 0.00 3.51
3063 5880 1.191535 CCGTATGTGGTCCCTTCTCA 58.808 55.000 0.00 0.00 0.00 3.27
3064 5881 1.481871 TCCGTATGTGGTCCCTTCTC 58.518 55.000 0.00 0.00 0.00 2.87
3065 5882 2.040178 GATCCGTATGTGGTCCCTTCT 58.960 52.381 0.00 0.00 0.00 2.85
3066 5883 1.760613 TGATCCGTATGTGGTCCCTTC 59.239 52.381 0.00 0.00 0.00 3.46
3067 5884 1.762957 CTGATCCGTATGTGGTCCCTT 59.237 52.381 0.00 0.00 0.00 3.95
3068 5885 1.414158 CTGATCCGTATGTGGTCCCT 58.586 55.000 0.00 0.00 0.00 4.20
3069 5886 0.249911 GCTGATCCGTATGTGGTCCC 60.250 60.000 0.00 0.00 0.00 4.46
3070 5887 0.597637 CGCTGATCCGTATGTGGTCC 60.598 60.000 0.00 0.00 0.00 4.46
3071 5888 1.215655 GCGCTGATCCGTATGTGGTC 61.216 60.000 0.00 0.00 0.00 4.02
3072 5889 1.227263 GCGCTGATCCGTATGTGGT 60.227 57.895 0.00 0.00 0.00 4.16
3073 5890 1.217585 CTGCGCTGATCCGTATGTGG 61.218 60.000 9.73 0.00 0.00 4.17
3074 5891 0.528466 ACTGCGCTGATCCGTATGTG 60.528 55.000 21.92 0.00 0.00 3.21
3075 5892 1.001268 CTACTGCGCTGATCCGTATGT 60.001 52.381 21.92 0.00 0.00 2.29
3076 5893 1.691127 CTACTGCGCTGATCCGTATG 58.309 55.000 21.92 0.00 0.00 2.39
3077 5894 0.039074 GCTACTGCGCTGATCCGTAT 60.039 55.000 21.92 0.00 0.00 3.06
3078 5895 1.359117 GCTACTGCGCTGATCCGTA 59.641 57.895 21.92 1.38 0.00 4.02
3079 5896 2.021068 ATGCTACTGCGCTGATCCGT 62.021 55.000 21.92 6.52 43.34 4.69
3080 5897 1.300465 ATGCTACTGCGCTGATCCG 60.300 57.895 21.92 6.87 43.34 4.18
3081 5898 1.226686 CCATGCTACTGCGCTGATCC 61.227 60.000 21.92 8.35 43.34 3.36
3082 5899 0.249615 TCCATGCTACTGCGCTGATC 60.250 55.000 21.92 9.37 43.34 2.92
3083 5900 0.178767 TTCCATGCTACTGCGCTGAT 59.821 50.000 21.92 7.85 43.34 2.90
3084 5901 0.178767 ATTCCATGCTACTGCGCTGA 59.821 50.000 21.92 3.90 43.34 4.26
3085 5902 1.528586 GTATTCCATGCTACTGCGCTG 59.471 52.381 13.23 13.23 43.34 5.18
3086 5903 1.138859 TGTATTCCATGCTACTGCGCT 59.861 47.619 9.73 0.00 43.34 5.92
3087 5904 1.581934 TGTATTCCATGCTACTGCGC 58.418 50.000 0.00 0.00 43.34 6.09
3088 5905 2.287915 GGTTGTATTCCATGCTACTGCG 59.712 50.000 0.00 0.00 43.34 5.18
3089 5906 3.313526 CAGGTTGTATTCCATGCTACTGC 59.686 47.826 0.00 0.00 40.20 4.40
3090 5907 3.313526 GCAGGTTGTATTCCATGCTACTG 59.686 47.826 0.00 0.00 0.00 2.74
3091 5908 3.054434 TGCAGGTTGTATTCCATGCTACT 60.054 43.478 0.00 0.00 33.57 2.57
3092 5909 3.278574 TGCAGGTTGTATTCCATGCTAC 58.721 45.455 0.00 0.00 33.57 3.58
3093 5910 3.643199 TGCAGGTTGTATTCCATGCTA 57.357 42.857 0.00 0.00 33.57 3.49
3094 5911 2.512692 TGCAGGTTGTATTCCATGCT 57.487 45.000 0.00 0.00 33.57 3.79
3095 5912 3.591196 TTTGCAGGTTGTATTCCATGC 57.409 42.857 0.00 0.00 33.27 4.06
3131 5948 9.211485 CAGAAATGATTTGGCTTTTAACAGAAT 57.789 29.630 0.00 0.00 0.00 2.40
3132 5949 7.171337 GCAGAAATGATTTGGCTTTTAACAGAA 59.829 33.333 0.00 0.00 0.00 3.02
3133 5950 6.646240 GCAGAAATGATTTGGCTTTTAACAGA 59.354 34.615 0.00 0.00 0.00 3.41
3134 5951 6.424509 TGCAGAAATGATTTGGCTTTTAACAG 59.575 34.615 11.04 0.00 0.00 3.16
3135 5952 6.286758 TGCAGAAATGATTTGGCTTTTAACA 58.713 32.000 11.04 0.00 0.00 2.41
3136 5953 6.424812 ACTGCAGAAATGATTTGGCTTTTAAC 59.575 34.615 23.35 0.00 0.00 2.01
3137 5954 6.523840 ACTGCAGAAATGATTTGGCTTTTAA 58.476 32.000 23.35 0.00 0.00 1.52
3138 5955 6.100404 ACTGCAGAAATGATTTGGCTTTTA 57.900 33.333 23.35 0.00 0.00 1.52
3139 5956 4.964593 ACTGCAGAAATGATTTGGCTTTT 58.035 34.783 23.35 0.00 0.00 2.27
3140 5957 4.612264 ACTGCAGAAATGATTTGGCTTT 57.388 36.364 23.35 0.00 0.00 3.51
3141 5958 4.562143 GGAACTGCAGAAATGATTTGGCTT 60.562 41.667 23.35 0.00 0.00 4.35
3142 5959 3.056322 GGAACTGCAGAAATGATTTGGCT 60.056 43.478 23.35 0.00 0.00 4.75
3143 5960 3.256558 GGAACTGCAGAAATGATTTGGC 58.743 45.455 23.35 0.00 0.00 4.52
3144 5961 4.524316 TGGAACTGCAGAAATGATTTGG 57.476 40.909 23.35 0.00 0.00 3.28
3145 5962 7.295201 CAATTTGGAACTGCAGAAATGATTTG 58.705 34.615 23.35 12.15 0.00 2.32
3146 5963 6.072893 GCAATTTGGAACTGCAGAAATGATTT 60.073 34.615 23.35 1.15 36.09 2.17
3147 5964 5.410439 GCAATTTGGAACTGCAGAAATGATT 59.590 36.000 23.35 10.02 36.09 2.57
3148 5965 4.933400 GCAATTTGGAACTGCAGAAATGAT 59.067 37.500 23.35 4.14 36.09 2.45
3149 5966 4.309099 GCAATTTGGAACTGCAGAAATGA 58.691 39.130 23.35 1.66 36.09 2.57
3150 5967 3.434299 GGCAATTTGGAACTGCAGAAATG 59.566 43.478 23.35 8.23 37.83 2.32
3151 5968 3.557686 GGGCAATTTGGAACTGCAGAAAT 60.558 43.478 23.35 12.84 37.83 2.17
3152 5969 2.224257 GGGCAATTTGGAACTGCAGAAA 60.224 45.455 23.35 10.88 37.83 2.52
3153 5970 1.344114 GGGCAATTTGGAACTGCAGAA 59.656 47.619 23.35 3.60 37.83 3.02
3154 5971 0.968405 GGGCAATTTGGAACTGCAGA 59.032 50.000 23.35 0.00 37.83 4.26
3155 5972 0.680618 TGGGCAATTTGGAACTGCAG 59.319 50.000 13.48 13.48 37.83 4.41
3156 5973 1.350071 ATGGGCAATTTGGAACTGCA 58.650 45.000 0.00 0.00 37.83 4.41
3157 5974 3.261580 GTTATGGGCAATTTGGAACTGC 58.738 45.455 0.00 0.00 35.28 4.40
3158 5975 4.533919 TGTTATGGGCAATTTGGAACTG 57.466 40.909 0.00 0.00 0.00 3.16
3159 5976 5.760484 ATTGTTATGGGCAATTTGGAACT 57.240 34.783 0.00 0.00 33.24 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.