Multiple sequence alignment - TraesCS7D01G430100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G430100 chr7D 100.000 4235 0 0 1 4235 549540829 549536595 0.000000e+00 7821.0
1 TraesCS7D01G430100 chr7B 92.774 2740 132 33 926 3635 593915078 593912375 0.000000e+00 3903.0
2 TraesCS7D01G430100 chr7B 91.690 361 14 7 3644 3993 593911999 593911644 1.770000e-133 486.0
3 TraesCS7D01G430100 chr7B 82.899 345 27 11 593 935 593917952 593917638 8.970000e-72 281.0
4 TraesCS7D01G430100 chr7A 92.910 1227 59 10 2389 3595 634980262 634979044 0.000000e+00 1759.0
5 TraesCS7D01G430100 chr7A 87.760 1250 81 31 865 2087 634992072 634990868 0.000000e+00 1395.0
6 TraesCS7D01G430100 chr7A 98.119 319 6 0 2084 2402 634982127 634981809 1.330000e-154 556.0
7 TraesCS7D01G430100 chr7A 90.215 419 21 11 3672 4073 634974066 634973651 2.900000e-146 529.0
8 TraesCS7D01G430100 chr5D 79.096 1306 237 28 2070 3365 544285984 544284705 0.000000e+00 867.0
9 TraesCS7D01G430100 chr5D 78.306 1263 220 37 1997 3236 543858498 543857267 0.000000e+00 765.0
10 TraesCS7D01G430100 chr5D 77.737 1078 206 16 2072 3129 543839891 543838828 7.730000e-177 630.0
11 TraesCS7D01G430100 chr4A 79.851 1211 216 23 2070 3269 624982530 624983723 0.000000e+00 859.0
12 TraesCS7D01G430100 chr4A 79.009 1191 218 21 2070 3252 625176963 625178129 0.000000e+00 785.0
13 TraesCS7D01G430100 chr4A 97.222 36 1 0 3009 3044 718077666 718077631 1.270000e-05 62.1
14 TraesCS7D01G430100 chr5B 78.760 1177 215 24 2070 3236 686050781 686049630 0.000000e+00 756.0
15 TraesCS7D01G430100 chr5B 89.982 559 50 2 38 595 523745377 523744824 0.000000e+00 717.0
16 TraesCS7D01G430100 chr5B 77.036 1228 235 31 2070 3269 685951094 685949886 0.000000e+00 662.0
17 TraesCS7D01G430100 chr3A 89.863 582 58 1 13 594 610518743 610519323 0.000000e+00 747.0
18 TraesCS7D01G430100 chr3D 88.599 614 46 10 13 603 459193921 459193309 0.000000e+00 725.0
19 TraesCS7D01G430100 chr3D 84.602 565 72 7 13 575 550208525 550209076 8.010000e-152 547.0
20 TraesCS7D01G430100 chr2D 89.455 569 56 3 26 594 87946446 87945882 0.000000e+00 715.0
21 TraesCS7D01G430100 chr6B 88.968 562 55 3 33 594 467912583 467912029 0.000000e+00 688.0
22 TraesCS7D01G430100 chr5A 87.993 583 69 1 13 595 583689288 583689869 0.000000e+00 688.0
23 TraesCS7D01G430100 chr6A 87.263 581 70 2 13 593 85132817 85133393 0.000000e+00 660.0
24 TraesCS7D01G430100 chr1B 86.567 536 64 4 61 595 532484839 532485367 6.100000e-163 584.0
25 TraesCS7D01G430100 chr1A 74.224 838 177 26 2302 3118 15884230 15885049 8.840000e-82 315.0
26 TraesCS7D01G430100 chr3B 79.126 206 29 7 2937 3141 2993076 2993268 3.440000e-26 130.0
27 TraesCS7D01G430100 chr4B 75.431 232 52 5 4006 4234 414269763 414269534 1.610000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G430100 chr7D 549536595 549540829 4234 True 7821.000000 7821 100.0000 1 4235 1 chr7D.!!$R1 4234
1 TraesCS7D01G430100 chr7B 593911644 593917952 6308 True 1556.666667 3903 89.1210 593 3993 3 chr7B.!!$R1 3400
2 TraesCS7D01G430100 chr7A 634990868 634992072 1204 True 1395.000000 1395 87.7600 865 2087 1 chr7A.!!$R2 1222
3 TraesCS7D01G430100 chr7A 634979044 634982127 3083 True 1157.500000 1759 95.5145 2084 3595 2 chr7A.!!$R3 1511
4 TraesCS7D01G430100 chr5D 544284705 544285984 1279 True 867.000000 867 79.0960 2070 3365 1 chr5D.!!$R3 1295
5 TraesCS7D01G430100 chr5D 543857267 543858498 1231 True 765.000000 765 78.3060 1997 3236 1 chr5D.!!$R2 1239
6 TraesCS7D01G430100 chr5D 543838828 543839891 1063 True 630.000000 630 77.7370 2072 3129 1 chr5D.!!$R1 1057
7 TraesCS7D01G430100 chr4A 624982530 624983723 1193 False 859.000000 859 79.8510 2070 3269 1 chr4A.!!$F1 1199
8 TraesCS7D01G430100 chr4A 625176963 625178129 1166 False 785.000000 785 79.0090 2070 3252 1 chr4A.!!$F2 1182
9 TraesCS7D01G430100 chr5B 686049630 686050781 1151 True 756.000000 756 78.7600 2070 3236 1 chr5B.!!$R3 1166
10 TraesCS7D01G430100 chr5B 523744824 523745377 553 True 717.000000 717 89.9820 38 595 1 chr5B.!!$R1 557
11 TraesCS7D01G430100 chr5B 685949886 685951094 1208 True 662.000000 662 77.0360 2070 3269 1 chr5B.!!$R2 1199
12 TraesCS7D01G430100 chr3A 610518743 610519323 580 False 747.000000 747 89.8630 13 594 1 chr3A.!!$F1 581
13 TraesCS7D01G430100 chr3D 459193309 459193921 612 True 725.000000 725 88.5990 13 603 1 chr3D.!!$R1 590
14 TraesCS7D01G430100 chr3D 550208525 550209076 551 False 547.000000 547 84.6020 13 575 1 chr3D.!!$F1 562
15 TraesCS7D01G430100 chr2D 87945882 87946446 564 True 715.000000 715 89.4550 26 594 1 chr2D.!!$R1 568
16 TraesCS7D01G430100 chr6B 467912029 467912583 554 True 688.000000 688 88.9680 33 594 1 chr6B.!!$R1 561
17 TraesCS7D01G430100 chr5A 583689288 583689869 581 False 688.000000 688 87.9930 13 595 1 chr5A.!!$F1 582
18 TraesCS7D01G430100 chr6A 85132817 85133393 576 False 660.000000 660 87.2630 13 593 1 chr6A.!!$F1 580
19 TraesCS7D01G430100 chr1B 532484839 532485367 528 False 584.000000 584 86.5670 61 595 1 chr1B.!!$F1 534
20 TraesCS7D01G430100 chr1A 15884230 15885049 819 False 315.000000 315 74.2240 2302 3118 1 chr1A.!!$F1 816

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
124 148 0.318762 GCTCAGGAAGACAAGACGGT 59.681 55.0 0.0 0.0 0.00 4.83 F
1204 3814 0.041839 GCCACGCATCAATCGATCAC 60.042 55.0 0.0 0.0 0.00 3.06 F
2536 6768 0.596082 CAACCGCCTTGGGTACTTTG 59.404 55.0 0.0 0.0 44.64 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1379 3997 0.320771 AGGCTTACAGACTTGCACCG 60.321 55.0 0.00 0.00 17.74 4.94 R
3013 7249 0.172803 CTTTCAGGGCTCATGCAAGC 59.827 55.0 1.52 1.52 41.91 4.01 R
4169 8807 0.032615 TATTGCTGGGCCGGGATTTT 60.033 50.0 15.62 2.07 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
103 127 2.492484 TGTGCGTTTAGGGTTTGTGTTT 59.508 40.909 0.00 0.00 0.00 2.83
117 141 2.997980 TGTGTTTTGCTCAGGAAGACA 58.002 42.857 0.00 0.00 0.00 3.41
124 148 0.318762 GCTCAGGAAGACAAGACGGT 59.681 55.000 0.00 0.00 0.00 4.83
149 173 3.756434 CGGCTTCCTGAAGTTGGAATAAA 59.244 43.478 8.57 0.00 42.03 1.40
406 430 0.603707 ACGACGACTTCCCGACTGTA 60.604 55.000 0.00 0.00 0.00 2.74
491 516 3.176708 TCGCTCAAGTAATTGTAGTCGC 58.823 45.455 2.43 0.00 0.00 5.19
496 521 1.922570 AGTAATTGTAGTCGCCGCTG 58.077 50.000 0.00 0.00 0.00 5.18
585 610 8.980481 ATGAATAGATTGAAAGTTTATCCCGT 57.020 30.769 0.00 0.00 0.00 5.28
616 641 2.290641 GTCATTTGCGGTAGGCCTAATG 59.709 50.000 15.83 15.28 42.61 1.90
625 650 2.290641 GGTAGGCCTAATGAACATTGCG 59.709 50.000 15.83 1.92 32.50 4.85
629 654 1.065551 GCCTAATGAACATTGCGGACC 59.934 52.381 16.18 0.00 32.50 4.46
630 655 2.364632 CCTAATGAACATTGCGGACCA 58.635 47.619 9.87 0.00 32.50 4.02
633 658 1.909700 ATGAACATTGCGGACCAAGT 58.090 45.000 0.00 0.00 36.76 3.16
634 659 1.234821 TGAACATTGCGGACCAAGTC 58.765 50.000 0.00 0.00 36.76 3.01
662 687 5.569355 TGACATTATCCTCTTGGAAAAGCA 58.431 37.500 0.00 0.00 46.80 3.91
688 713 5.068987 TGGTTTATGCTATCTTGCAATTCCC 59.931 40.000 0.00 0.00 46.61 3.97
692 717 4.724074 TGCTATCTTGCAATTCCCTTTG 57.276 40.909 0.00 0.00 40.29 2.77
728 754 6.578163 TTTGTTAAAAATTCCCCTCTACCG 57.422 37.500 0.00 0.00 0.00 4.02
739 765 7.628501 ATTCCCCTCTACCGTAAAAATATCT 57.371 36.000 0.00 0.00 0.00 1.98
740 766 8.731591 ATTCCCCTCTACCGTAAAAATATCTA 57.268 34.615 0.00 0.00 0.00 1.98
741 767 7.771927 TCCCCTCTACCGTAAAAATATCTAG 57.228 40.000 0.00 0.00 0.00 2.43
769 795 4.487019 TGGACGTTTTTCCTTCAAACAAC 58.513 39.130 0.00 0.00 36.51 3.32
770 796 4.218852 TGGACGTTTTTCCTTCAAACAACT 59.781 37.500 0.00 0.00 36.51 3.16
773 799 6.807720 GGACGTTTTTCCTTCAAACAACTTTA 59.192 34.615 0.00 0.00 34.33 1.85
774 800 7.008901 GGACGTTTTTCCTTCAAACAACTTTAG 59.991 37.037 0.00 0.00 34.33 1.85
775 801 7.595604 ACGTTTTTCCTTCAAACAACTTTAGA 58.404 30.769 0.00 0.00 34.33 2.10
776 802 8.248253 ACGTTTTTCCTTCAAACAACTTTAGAT 58.752 29.630 0.00 0.00 34.33 1.98
777 803 9.724839 CGTTTTTCCTTCAAACAACTTTAGATA 57.275 29.630 0.00 0.00 34.33 1.98
832 858 2.278332 AGACCTTGTTTTCAGAGGCC 57.722 50.000 0.00 0.00 34.09 5.19
849 875 4.100035 AGAGGCCAAGGAAAAACTGAAAAG 59.900 41.667 5.01 0.00 0.00 2.27
852 878 3.804325 GCCAAGGAAAAACTGAAAAGAGC 59.196 43.478 0.00 0.00 0.00 4.09
853 879 4.371786 CCAAGGAAAAACTGAAAAGAGCC 58.628 43.478 0.00 0.00 0.00 4.70
855 881 4.926140 AGGAAAAACTGAAAAGAGCCAG 57.074 40.909 0.00 0.00 36.53 4.85
856 882 3.068732 AGGAAAAACTGAAAAGAGCCAGC 59.931 43.478 0.00 0.00 33.90 4.85
857 883 3.384668 GAAAAACTGAAAAGAGCCAGCC 58.615 45.455 0.00 0.00 33.90 4.85
858 884 2.371658 AAACTGAAAAGAGCCAGCCT 57.628 45.000 0.00 0.00 33.90 4.58
859 885 3.508845 AAACTGAAAAGAGCCAGCCTA 57.491 42.857 0.00 0.00 33.90 3.93
860 886 2.481289 ACTGAAAAGAGCCAGCCTAC 57.519 50.000 0.00 0.00 33.90 3.18
861 887 1.699634 ACTGAAAAGAGCCAGCCTACA 59.300 47.619 0.00 0.00 33.90 2.74
862 888 2.106511 ACTGAAAAGAGCCAGCCTACAA 59.893 45.455 0.00 0.00 33.90 2.41
863 889 2.746362 CTGAAAAGAGCCAGCCTACAAG 59.254 50.000 0.00 0.00 0.00 3.16
910 944 2.432510 CCTCTCAAAGGCCTTCTCGTAT 59.567 50.000 20.79 0.00 38.67 3.06
969 3572 3.144193 CGCCTCCTTCTCCTCGCT 61.144 66.667 0.00 0.00 0.00 4.93
1111 3717 4.509737 GGTCAGTACCCTCGCCGC 62.510 72.222 0.00 0.00 40.21 6.53
1112 3718 4.509737 GTCAGTACCCTCGCCGCC 62.510 72.222 0.00 0.00 0.00 6.13
1113 3719 4.753662 TCAGTACCCTCGCCGCCT 62.754 66.667 0.00 0.00 0.00 5.52
1114 3720 4.208686 CAGTACCCTCGCCGCCTC 62.209 72.222 0.00 0.00 0.00 4.70
1115 3721 4.753662 AGTACCCTCGCCGCCTCA 62.754 66.667 0.00 0.00 0.00 3.86
1117 3723 4.753662 TACCCTCGCCGCCTCACT 62.754 66.667 0.00 0.00 0.00 3.41
1120 3726 3.764466 CCTCGCCGCCTCACTCTT 61.764 66.667 0.00 0.00 0.00 2.85
1122 3728 4.116328 TCGCCGCCTCACTCTTCG 62.116 66.667 0.00 0.00 0.00 3.79
1123 3729 4.116328 CGCCGCCTCACTCTTCGA 62.116 66.667 0.00 0.00 0.00 3.71
1125 3731 1.590259 GCCGCCTCACTCTTCGATC 60.590 63.158 0.00 0.00 0.00 3.69
1144 3753 1.925888 GCCACCCCTCCTTGATCAT 59.074 57.895 0.00 0.00 0.00 2.45
1147 3756 1.133976 CCACCCCTCCTTGATCATGAC 60.134 57.143 10.07 0.00 0.00 3.06
1155 3764 5.500234 CCTCCTTGATCATGACCTGTTTAA 58.500 41.667 10.07 0.00 0.00 1.52
1157 3766 6.604795 CCTCCTTGATCATGACCTGTTTAATT 59.395 38.462 10.07 0.00 0.00 1.40
1158 3767 7.395190 TCCTTGATCATGACCTGTTTAATTG 57.605 36.000 10.07 0.00 0.00 2.32
1159 3768 7.174413 TCCTTGATCATGACCTGTTTAATTGA 58.826 34.615 10.07 0.00 0.00 2.57
1161 3770 7.395190 TTGATCATGACCTGTTTAATTGAGG 57.605 36.000 0.00 0.00 0.00 3.86
1162 3771 6.484288 TGATCATGACCTGTTTAATTGAGGT 58.516 36.000 0.00 0.00 43.06 3.85
1204 3814 0.041839 GCCACGCATCAATCGATCAC 60.042 55.000 0.00 0.00 0.00 3.06
1226 3836 2.483877 CACTGCCGCTTTAGTGAATCAA 59.516 45.455 3.76 0.00 45.46 2.57
1227 3837 3.127548 CACTGCCGCTTTAGTGAATCAAT 59.872 43.478 3.76 0.00 45.46 2.57
1228 3838 3.375299 ACTGCCGCTTTAGTGAATCAATC 59.625 43.478 0.00 0.00 0.00 2.67
1229 3839 3.342719 TGCCGCTTTAGTGAATCAATCA 58.657 40.909 0.00 0.00 35.05 2.57
1251 3861 8.682936 ATCAGTAGTGAAATTTCAAGTGTCTT 57.317 30.769 22.07 8.08 39.21 3.01
1259 3869 7.330700 GTGAAATTTCAAGTGTCTTTTGGTGAA 59.669 33.333 22.07 0.00 39.21 3.18
1264 3874 6.072112 TCAAGTGTCTTTTGGTGAATTAGC 57.928 37.500 0.00 0.00 0.00 3.09
1268 3878 3.255642 TGTCTTTTGGTGAATTAGCAGGC 59.744 43.478 0.00 0.00 38.18 4.85
1284 3894 0.893727 AGGCATTCGTGGGGTGTTTC 60.894 55.000 0.00 0.00 0.00 2.78
1302 3912 6.183360 GGTGTTTCGGTGAATTACTAGTGATG 60.183 42.308 5.39 0.00 0.00 3.07
1310 3920 6.092259 GGTGAATTACTAGTGATGTTGGTGAC 59.908 42.308 5.39 0.00 0.00 3.67
1359 3977 6.296030 GGGTATTTTGGTGAACTAGTAGTGGA 60.296 42.308 2.90 0.00 0.00 4.02
1360 3978 6.592994 GGTATTTTGGTGAACTAGTAGTGGAC 59.407 42.308 2.90 3.65 0.00 4.02
1361 3979 5.881923 TTTTGGTGAACTAGTAGTGGACT 57.118 39.130 2.90 0.00 42.69 3.85
1362 3980 6.982160 TTTTGGTGAACTAGTAGTGGACTA 57.018 37.500 2.90 0.00 39.81 2.59
1379 3997 7.331791 AGTGGACTAGTGGTAATTTCTGAATC 58.668 38.462 0.00 0.00 0.00 2.52
1384 4002 3.689649 AGTGGTAATTTCTGAATCGGTGC 59.310 43.478 0.00 0.00 0.00 5.01
1396 4017 1.726853 ATCGGTGCAAGTCTGTAAGC 58.273 50.000 0.00 0.00 0.00 3.09
1408 4029 7.041372 TGCAAGTCTGTAAGCCTTTTAGTTTAG 60.041 37.037 0.00 0.00 0.00 1.85
1428 4050 9.953565 AGTTTAGGAATACAGTTTGCATTAGTA 57.046 29.630 0.00 0.00 0.00 1.82
1560 4186 8.398878 TCGACAAGGGATAAACTAAAAACAAT 57.601 30.769 0.00 0.00 0.00 2.71
1561 4187 8.508875 TCGACAAGGGATAAACTAAAAACAATC 58.491 33.333 0.00 0.00 0.00 2.67
1562 4188 7.480542 CGACAAGGGATAAACTAAAAACAATCG 59.519 37.037 0.00 0.00 0.00 3.34
1563 4189 8.398878 ACAAGGGATAAACTAAAAACAATCGA 57.601 30.769 0.00 0.00 0.00 3.59
1564 4190 8.852135 ACAAGGGATAAACTAAAAACAATCGAA 58.148 29.630 0.00 0.00 0.00 3.71
1565 4191 9.685828 CAAGGGATAAACTAAAAACAATCGAAA 57.314 29.630 0.00 0.00 0.00 3.46
1604 4230 6.591062 CACATAAACATGCAACAGGCTTTATT 59.409 34.615 0.00 0.00 45.15 1.40
1622 4248 9.996554 GGCTTTATTGCCCTTTTTATATAATGT 57.003 29.630 0.00 0.00 46.82 2.71
1741 4368 2.366266 TGTTGTCAGTAGTGGTGGTACC 59.634 50.000 4.43 4.43 39.22 3.34
1931 4559 6.232581 AGCATGCTTAAATAGACACTCTCT 57.767 37.500 16.30 0.00 0.00 3.10
2441 6659 6.279882 GCTGCTCATATGGGTATCTTATCTC 58.720 44.000 4.11 0.00 0.00 2.75
2469 6687 1.073897 GGAGCACTGCCTCCTTGTT 59.926 57.895 10.60 0.00 46.39 2.83
2480 6698 1.538512 CCTCCTTGTTGATGTGCACAG 59.461 52.381 25.84 9.32 0.00 3.66
2487 6705 1.194547 GTTGATGTGCACAGTGGTACG 59.805 52.381 25.84 0.00 0.00 3.67
2536 6768 0.596082 CAACCGCCTTGGGTACTTTG 59.404 55.000 0.00 0.00 44.64 2.77
2705 6938 5.992217 AGATAGTGTTCTTCAAAGGTGTCAC 59.008 40.000 0.00 0.00 0.00 3.67
2769 7002 2.089201 TCACCTGAATTCAGCATGCAG 58.911 47.619 27.01 12.90 42.47 4.41
2905 7141 3.673338 TGACTCGTGTTATCGCTTCTTTG 59.327 43.478 0.00 0.00 0.00 2.77
3013 7249 4.722220 TGATAGGAGGAATCCTGCATTTG 58.278 43.478 22.75 0.00 44.71 2.32
3042 7278 1.925888 CCCTGAAAGATGGGGAGGG 59.074 63.158 0.00 0.00 42.58 4.30
3052 7288 2.581246 AGATGGGGAGGGAAAAGTAACC 59.419 50.000 0.00 0.00 0.00 2.85
3298 7547 8.802267 TGGCTATTTCTGCTGTTTTAACTTTAT 58.198 29.630 0.00 0.00 0.00 1.40
3299 7548 9.639601 GGCTATTTCTGCTGTTTTAACTTTATT 57.360 29.630 0.00 0.00 0.00 1.40
3373 7623 6.266558 AGTGTTATGTGTTCAAGGCCATTTAA 59.733 34.615 5.01 0.00 0.00 1.52
3406 7658 2.170166 CATGGCTGGTTGTAATGTGGT 58.830 47.619 0.00 0.00 0.00 4.16
3428 7681 1.273048 TCATTTGTTGATGCCTGGTGC 59.727 47.619 0.00 0.00 41.77 5.01
3450 7706 6.019479 GTGCCAATCTACTTAGAATGACTTCG 60.019 42.308 3.30 0.00 35.71 3.79
3489 7745 2.823196 TGCGCTTCCATGTATTTTCG 57.177 45.000 9.73 0.00 0.00 3.46
3530 7789 5.346522 CCGTATAGAAGTTTGTACTCACCC 58.653 45.833 0.00 0.00 31.99 4.61
3531 7790 5.032863 CGTATAGAAGTTTGTACTCACCCG 58.967 45.833 0.00 0.00 31.99 5.28
3534 7793 4.146745 AGAAGTTTGTACTCACCCGTTT 57.853 40.909 0.00 0.00 31.99 3.60
3536 7795 2.567985 AGTTTGTACTCACCCGTTTGG 58.432 47.619 0.00 0.00 41.37 3.28
3537 7796 1.002142 GTTTGTACTCACCCGTTTGGC 60.002 52.381 0.00 0.00 37.83 4.52
3538 7797 0.470766 TTGTACTCACCCGTTTGGCT 59.529 50.000 0.00 0.00 37.83 4.75
3539 7798 0.250124 TGTACTCACCCGTTTGGCTG 60.250 55.000 0.00 0.00 37.83 4.85
3540 7799 0.953960 GTACTCACCCGTTTGGCTGG 60.954 60.000 0.00 0.00 37.83 4.85
3603 7863 7.424227 CAATGTTTGGTCATTGCAGTATTTT 57.576 32.000 6.50 0.00 44.82 1.82
3622 7882 8.691797 AGTATTTTGCTCCACTTTTTGTCTAAA 58.308 29.630 0.00 0.00 0.00 1.85
3640 7900 2.505118 GCTGGAGCGACTCGACAC 60.505 66.667 1.63 0.00 0.00 3.67
3696 8325 2.614057 GCAGCCTGCGTTTACAAGATAT 59.386 45.455 0.00 0.00 31.71 1.63
3697 8326 3.807622 GCAGCCTGCGTTTACAAGATATA 59.192 43.478 0.00 0.00 31.71 0.86
3698 8327 4.452455 GCAGCCTGCGTTTACAAGATATAT 59.548 41.667 0.00 0.00 31.71 0.86
3699 8328 5.637810 GCAGCCTGCGTTTACAAGATATATA 59.362 40.000 0.00 0.00 31.71 0.86
3700 8329 6.183360 GCAGCCTGCGTTTACAAGATATATAG 60.183 42.308 0.00 0.00 31.71 1.31
3701 8330 6.868864 CAGCCTGCGTTTACAAGATATATAGT 59.131 38.462 0.00 0.00 0.00 2.12
3755 8384 3.076621 CAGAGTAGCCATTTGAACTGCA 58.923 45.455 0.00 0.00 0.00 4.41
3761 8390 1.000060 GCCATTTGAACTGCAGCTCAA 60.000 47.619 24.95 24.95 0.00 3.02
3767 8396 1.202915 TGAACTGCAGCTCAATCCCAA 60.203 47.619 17.27 0.00 0.00 4.12
3794 8423 0.465705 TGGCGGTCTCTTGGATCATC 59.534 55.000 0.00 0.00 0.00 2.92
3816 8445 4.817464 TCACTGTGCGGTTGTAATTTTACT 59.183 37.500 2.12 0.00 34.77 2.24
3848 8477 5.494724 TGTAAAGCAGAGCAATTGATCTCT 58.505 37.500 22.89 18.47 38.98 3.10
3849 8478 5.583854 TGTAAAGCAGAGCAATTGATCTCTC 59.416 40.000 22.89 16.77 38.98 3.20
3876 8508 4.095410 TGCGCAAAATCAAGATAAGTGG 57.905 40.909 8.16 0.00 0.00 4.00
3931 8563 7.499321 TTTGTTCTATTGTTTGACACCGTAT 57.501 32.000 0.00 0.00 0.00 3.06
3932 8564 7.499321 TTGTTCTATTGTTTGACACCGTATT 57.501 32.000 0.00 0.00 0.00 1.89
3972 8604 9.890629 AAAGATCTATGAAGCATGTAGTGTTAA 57.109 29.630 0.00 0.00 0.00 2.01
3997 8635 3.737702 GCCCTTATATGGCCGGAAA 57.262 52.632 5.05 0.00 43.33 3.13
3998 8636 1.989706 GCCCTTATATGGCCGGAAAA 58.010 50.000 5.05 0.00 43.33 2.29
3999 8637 2.525368 GCCCTTATATGGCCGGAAAAT 58.475 47.619 5.05 0.00 43.33 1.82
4000 8638 2.231235 GCCCTTATATGGCCGGAAAATG 59.769 50.000 5.05 0.00 43.33 2.32
4001 8639 2.231235 CCCTTATATGGCCGGAAAATGC 59.769 50.000 5.05 0.00 0.00 3.56
4007 8645 4.519182 GCCGGAAAATGCCAATGG 57.481 55.556 5.05 0.00 0.00 3.16
4008 8646 1.896694 GCCGGAAAATGCCAATGGA 59.103 52.632 5.05 0.00 0.00 3.41
4009 8647 0.179103 GCCGGAAAATGCCAATGGAG 60.179 55.000 5.05 0.00 0.00 3.86
4010 8648 1.473258 CCGGAAAATGCCAATGGAGA 58.527 50.000 2.05 0.00 0.00 3.71
4011 8649 1.134946 CCGGAAAATGCCAATGGAGAC 59.865 52.381 2.05 0.00 0.00 3.36
4012 8650 1.134946 CGGAAAATGCCAATGGAGACC 59.865 52.381 2.05 0.00 0.00 3.85
4013 8651 1.134946 GGAAAATGCCAATGGAGACCG 59.865 52.381 2.05 0.00 0.00 4.79
4014 8652 2.091541 GAAAATGCCAATGGAGACCGA 58.908 47.619 2.05 0.00 0.00 4.69
4015 8653 1.755179 AAATGCCAATGGAGACCGAG 58.245 50.000 2.05 0.00 0.00 4.63
4016 8654 0.749454 AATGCCAATGGAGACCGAGC 60.749 55.000 2.05 0.00 0.00 5.03
4017 8655 1.913951 ATGCCAATGGAGACCGAGCA 61.914 55.000 2.05 0.00 0.00 4.26
4018 8656 1.153086 GCCAATGGAGACCGAGCAT 60.153 57.895 2.05 0.00 0.00 3.79
4019 8657 0.749454 GCCAATGGAGACCGAGCATT 60.749 55.000 2.05 0.00 0.00 3.56
4020 8658 1.475034 GCCAATGGAGACCGAGCATTA 60.475 52.381 2.05 0.00 0.00 1.90
4021 8659 2.487934 CCAATGGAGACCGAGCATTAG 58.512 52.381 0.00 0.00 0.00 1.73
4022 8660 2.158900 CCAATGGAGACCGAGCATTAGT 60.159 50.000 0.00 0.00 0.00 2.24
4023 8661 2.868583 CAATGGAGACCGAGCATTAGTG 59.131 50.000 0.00 0.00 0.00 2.74
4024 8662 1.847328 TGGAGACCGAGCATTAGTGA 58.153 50.000 0.00 0.00 0.00 3.41
4025 8663 1.751351 TGGAGACCGAGCATTAGTGAG 59.249 52.381 0.00 0.00 0.00 3.51
4026 8664 1.537135 GGAGACCGAGCATTAGTGAGC 60.537 57.143 0.00 0.00 0.00 4.26
4027 8665 1.407258 GAGACCGAGCATTAGTGAGCT 59.593 52.381 0.00 0.00 45.25 4.09
4033 8671 3.651803 GAGCATTAGTGAGCTCGGTAT 57.348 47.619 9.64 0.00 46.53 2.73
4034 8672 3.983741 GAGCATTAGTGAGCTCGGTATT 58.016 45.455 9.64 0.00 46.53 1.89
4035 8673 4.372656 GAGCATTAGTGAGCTCGGTATTT 58.627 43.478 9.64 0.00 46.53 1.40
4036 8674 5.529791 GAGCATTAGTGAGCTCGGTATTTA 58.470 41.667 9.64 0.00 46.53 1.40
4037 8675 5.914033 AGCATTAGTGAGCTCGGTATTTAA 58.086 37.500 9.64 2.07 36.00 1.52
4038 8676 6.346096 AGCATTAGTGAGCTCGGTATTTAAA 58.654 36.000 9.64 0.00 36.00 1.52
4039 8677 6.821665 AGCATTAGTGAGCTCGGTATTTAAAA 59.178 34.615 9.64 0.00 36.00 1.52
4040 8678 7.335924 AGCATTAGTGAGCTCGGTATTTAAAAA 59.664 33.333 9.64 0.00 36.00 1.94
4105 8743 6.895607 AAAATTGTGGAAACTTAAACGTGG 57.104 33.333 0.00 0.00 0.00 4.94
4106 8744 5.585820 AATTGTGGAAACTTAAACGTGGT 57.414 34.783 0.00 0.00 0.00 4.16
4107 8745 4.619437 TTGTGGAAACTTAAACGTGGTC 57.381 40.909 0.00 0.00 0.00 4.02
4108 8746 2.944349 TGTGGAAACTTAAACGTGGTCC 59.056 45.455 0.00 0.00 0.00 4.46
4109 8747 2.032636 GTGGAAACTTAAACGTGGTCCG 60.033 50.000 0.00 0.00 44.03 4.79
4110 8748 1.069703 GGAAACTTAAACGTGGTCCGC 60.070 52.381 0.00 0.00 41.42 5.54
4111 8749 1.598601 GAAACTTAAACGTGGTCCGCA 59.401 47.619 2.76 0.00 41.42 5.69
4112 8750 1.223187 AACTTAAACGTGGTCCGCAG 58.777 50.000 2.76 0.00 41.42 5.18
4126 8764 3.907927 CGCAGGAACGTGTGAAAAA 57.092 47.368 0.00 0.00 0.00 1.94
4127 8765 2.399396 CGCAGGAACGTGTGAAAAAT 57.601 45.000 0.00 0.00 0.00 1.82
4128 8766 2.307049 CGCAGGAACGTGTGAAAAATC 58.693 47.619 0.00 0.00 0.00 2.17
4129 8767 2.032030 CGCAGGAACGTGTGAAAAATCT 60.032 45.455 0.00 0.00 0.00 2.40
4130 8768 3.548014 CGCAGGAACGTGTGAAAAATCTT 60.548 43.478 0.00 0.00 0.00 2.40
4131 8769 4.359706 GCAGGAACGTGTGAAAAATCTTT 58.640 39.130 0.00 0.00 0.00 2.52
4132 8770 4.803613 GCAGGAACGTGTGAAAAATCTTTT 59.196 37.500 0.00 0.00 0.00 2.27
4133 8771 5.276348 GCAGGAACGTGTGAAAAATCTTTTG 60.276 40.000 0.00 0.00 0.00 2.44
4134 8772 6.033341 CAGGAACGTGTGAAAAATCTTTTGA 58.967 36.000 0.00 0.00 0.00 2.69
4135 8773 6.529829 CAGGAACGTGTGAAAAATCTTTTGAA 59.470 34.615 0.00 0.00 0.00 2.69
4136 8774 7.062839 CAGGAACGTGTGAAAAATCTTTTGAAA 59.937 33.333 0.00 0.00 0.00 2.69
4137 8775 7.600752 AGGAACGTGTGAAAAATCTTTTGAAAA 59.399 29.630 0.00 0.00 0.00 2.29
4138 8776 8.387354 GGAACGTGTGAAAAATCTTTTGAAAAT 58.613 29.630 0.00 0.00 0.00 1.82
4141 8779 9.581099 ACGTGTGAAAAATCTTTTGAAAATACT 57.419 25.926 0.00 0.00 0.00 2.12
4142 8780 9.833894 CGTGTGAAAAATCTTTTGAAAATACTG 57.166 29.630 0.00 0.00 0.00 2.74
4154 8792 9.965824 CTTTTGAAAATACTGTGATTTGTAGGT 57.034 29.630 0.00 0.00 0.00 3.08
4156 8794 9.743057 TTTGAAAATACTGTGATTTGTAGGTTG 57.257 29.630 0.00 0.00 0.00 3.77
4157 8795 8.458573 TGAAAATACTGTGATTTGTAGGTTGT 57.541 30.769 0.00 0.00 0.00 3.32
4158 8796 9.562408 TGAAAATACTGTGATTTGTAGGTTGTA 57.438 29.630 0.00 0.00 0.00 2.41
4159 8797 9.821662 GAAAATACTGTGATTTGTAGGTTGTAC 57.178 33.333 0.00 0.00 0.00 2.90
4160 8798 8.911918 AAATACTGTGATTTGTAGGTTGTACA 57.088 30.769 0.00 0.00 0.00 2.90
4161 8799 8.911918 AATACTGTGATTTGTAGGTTGTACAA 57.088 30.769 3.59 3.59 35.84 2.41
4163 8801 7.633193 ACTGTGATTTGTAGGTTGTACAAAA 57.367 32.000 10.51 0.00 46.38 2.44
4164 8802 8.057536 ACTGTGATTTGTAGGTTGTACAAAAA 57.942 30.769 10.51 7.34 46.38 1.94
4180 8818 2.831685 AAAAAGACAAAATCCCGGCC 57.168 45.000 0.00 0.00 0.00 6.13
4181 8819 0.973632 AAAAGACAAAATCCCGGCCC 59.026 50.000 0.00 0.00 0.00 5.80
4182 8820 0.178947 AAAGACAAAATCCCGGCCCA 60.179 50.000 0.00 0.00 0.00 5.36
4183 8821 0.611896 AAGACAAAATCCCGGCCCAG 60.612 55.000 0.00 0.00 0.00 4.45
4184 8822 2.679996 ACAAAATCCCGGCCCAGC 60.680 61.111 0.00 0.00 0.00 4.85
4185 8823 2.679642 CAAAATCCCGGCCCAGCA 60.680 61.111 0.00 0.00 0.00 4.41
4186 8824 2.119391 AAAATCCCGGCCCAGCAA 59.881 55.556 0.00 0.00 0.00 3.91
4187 8825 1.306056 AAAATCCCGGCCCAGCAAT 60.306 52.632 0.00 0.00 0.00 3.56
4188 8826 0.032615 AAAATCCCGGCCCAGCAATA 60.033 50.000 0.00 0.00 0.00 1.90
4189 8827 0.032615 AAATCCCGGCCCAGCAATAA 60.033 50.000 0.00 0.00 0.00 1.40
4190 8828 0.032615 AATCCCGGCCCAGCAATAAA 60.033 50.000 0.00 0.00 0.00 1.40
4191 8829 0.032615 ATCCCGGCCCAGCAATAAAA 60.033 50.000 0.00 0.00 0.00 1.52
4192 8830 0.968393 TCCCGGCCCAGCAATAAAAC 60.968 55.000 0.00 0.00 0.00 2.43
4193 8831 1.254284 CCCGGCCCAGCAATAAAACA 61.254 55.000 0.00 0.00 0.00 2.83
4194 8832 0.108851 CCGGCCCAGCAATAAAACAC 60.109 55.000 0.00 0.00 0.00 3.32
4195 8833 0.108851 CGGCCCAGCAATAAAACACC 60.109 55.000 0.00 0.00 0.00 4.16
4196 8834 0.249120 GGCCCAGCAATAAAACACCC 59.751 55.000 0.00 0.00 0.00 4.61
4197 8835 0.108851 GCCCAGCAATAAAACACCCG 60.109 55.000 0.00 0.00 0.00 5.28
4198 8836 0.108851 CCCAGCAATAAAACACCCGC 60.109 55.000 0.00 0.00 0.00 6.13
4199 8837 0.108851 CCAGCAATAAAACACCCGCC 60.109 55.000 0.00 0.00 0.00 6.13
4200 8838 0.108851 CAGCAATAAAACACCCGCCC 60.109 55.000 0.00 0.00 0.00 6.13
4201 8839 0.540830 AGCAATAAAACACCCGCCCA 60.541 50.000 0.00 0.00 0.00 5.36
4202 8840 0.534873 GCAATAAAACACCCGCCCAT 59.465 50.000 0.00 0.00 0.00 4.00
4203 8841 1.066502 GCAATAAAACACCCGCCCATT 60.067 47.619 0.00 0.00 0.00 3.16
4204 8842 2.614229 GCAATAAAACACCCGCCCATTT 60.614 45.455 0.00 0.00 0.00 2.32
4205 8843 3.669536 CAATAAAACACCCGCCCATTTT 58.330 40.909 0.00 0.00 0.00 1.82
4206 8844 4.822026 CAATAAAACACCCGCCCATTTTA 58.178 39.130 0.00 0.00 32.64 1.52
4207 8845 4.729227 ATAAAACACCCGCCCATTTTAG 57.271 40.909 0.00 0.00 31.86 1.85
4208 8846 2.296073 AAACACCCGCCCATTTTAGA 57.704 45.000 0.00 0.00 0.00 2.10
4209 8847 2.296073 AACACCCGCCCATTTTAGAA 57.704 45.000 0.00 0.00 0.00 2.10
4210 8848 2.296073 ACACCCGCCCATTTTAGAAA 57.704 45.000 0.00 0.00 0.00 2.52
4211 8849 2.815158 ACACCCGCCCATTTTAGAAAT 58.185 42.857 0.00 0.00 0.00 2.17
4212 8850 3.970842 ACACCCGCCCATTTTAGAAATA 58.029 40.909 0.00 0.00 0.00 1.40
4213 8851 3.697542 ACACCCGCCCATTTTAGAAATAC 59.302 43.478 0.00 0.00 0.00 1.89
4214 8852 2.946990 ACCCGCCCATTTTAGAAATACG 59.053 45.455 0.00 0.00 0.00 3.06
4215 8853 2.946990 CCCGCCCATTTTAGAAATACGT 59.053 45.455 0.00 0.00 0.00 3.57
4216 8854 4.128643 CCCGCCCATTTTAGAAATACGTA 58.871 43.478 0.00 0.00 0.00 3.57
4217 8855 4.758165 CCCGCCCATTTTAGAAATACGTAT 59.242 41.667 1.14 1.14 0.00 3.06
4218 8856 5.239963 CCCGCCCATTTTAGAAATACGTATT 59.760 40.000 15.07 15.07 0.00 1.89
4219 8857 6.238814 CCCGCCCATTTTAGAAATACGTATTT 60.239 38.462 28.85 28.85 38.51 1.40
4220 8858 6.635239 CCGCCCATTTTAGAAATACGTATTTG 59.365 38.462 32.38 19.04 36.13 2.32
4221 8859 7.411274 CGCCCATTTTAGAAATACGTATTTGA 58.589 34.615 32.38 19.49 36.13 2.69
4222 8860 7.375017 CGCCCATTTTAGAAATACGTATTTGAC 59.625 37.037 32.38 20.81 36.13 3.18
4223 8861 8.403236 GCCCATTTTAGAAATACGTATTTGACT 58.597 33.333 32.38 25.42 36.13 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.340889 GCCTCCATGACTCTCTAGCAG 59.659 57.143 0.00 0.00 0.00 4.24
1 2 1.407936 GCCTCCATGACTCTCTAGCA 58.592 55.000 0.00 0.00 0.00 3.49
2 3 0.313672 CGCCTCCATGACTCTCTAGC 59.686 60.000 0.00 0.00 0.00 3.42
3 4 1.336440 CACGCCTCCATGACTCTCTAG 59.664 57.143 0.00 0.00 0.00 2.43
4 5 1.064685 TCACGCCTCCATGACTCTCTA 60.065 52.381 0.00 0.00 0.00 2.43
5 6 0.323816 TCACGCCTCCATGACTCTCT 60.324 55.000 0.00 0.00 0.00 3.10
6 7 0.749649 ATCACGCCTCCATGACTCTC 59.250 55.000 0.00 0.00 0.00 3.20
7 8 0.463204 CATCACGCCTCCATGACTCT 59.537 55.000 0.00 0.00 0.00 3.24
8 9 0.531532 CCATCACGCCTCCATGACTC 60.532 60.000 0.00 0.00 0.00 3.36
9 10 0.977627 TCCATCACGCCTCCATGACT 60.978 55.000 0.00 0.00 0.00 3.41
10 11 0.107456 ATCCATCACGCCTCCATGAC 59.893 55.000 0.00 0.00 0.00 3.06
11 12 0.394192 GATCCATCACGCCTCCATGA 59.606 55.000 0.00 0.00 0.00 3.07
103 127 1.270305 CCGTCTTGTCTTCCTGAGCAA 60.270 52.381 0.00 0.00 0.00 3.91
117 141 4.699522 GGAAGCCGCCACCGTCTT 62.700 66.667 0.00 0.00 35.08 3.01
124 148 1.600636 CAACTTCAGGAAGCCGCCA 60.601 57.895 8.89 0.00 41.99 5.69
149 173 0.033306 GGGACTAGACGGGGAGAACT 60.033 60.000 0.00 0.00 0.00 3.01
277 301 5.007234 CACATGAACACAAACTAACGAAGGA 59.993 40.000 0.00 0.00 0.00 3.36
379 403 0.243095 GGAAGTCGTCGTGCTAAGGT 59.757 55.000 0.00 0.00 0.00 3.50
406 430 3.078837 CGGGCAAACCTTGTTGTAGTAT 58.921 45.455 0.00 0.00 36.97 2.12
491 516 2.063979 TCCATAGACCACCCAGCGG 61.064 63.158 0.00 0.00 0.00 5.52
605 630 2.290641 CCGCAATGTTCATTAGGCCTAC 59.709 50.000 13.46 3.36 0.00 3.18
606 631 2.171659 TCCGCAATGTTCATTAGGCCTA 59.828 45.455 8.91 8.91 0.00 3.93
607 632 1.064758 TCCGCAATGTTCATTAGGCCT 60.065 47.619 11.78 11.78 0.00 5.19
616 641 1.197721 CTGACTTGGTCCGCAATGTTC 59.802 52.381 0.00 0.00 0.00 3.18
649 674 5.349543 GCATAAACCATTGCTTTTCCAAGAG 59.650 40.000 0.00 0.00 35.95 2.85
662 687 7.212274 GGAATTGCAAGATAGCATAAACCATT 58.788 34.615 4.94 0.00 45.19 3.16
715 741 7.628501 AGATATTTTTACGGTAGAGGGGAAT 57.371 36.000 0.00 0.00 0.00 3.01
719 745 9.294614 AGTACTAGATATTTTTACGGTAGAGGG 57.705 37.037 0.00 0.00 0.00 4.30
727 753 9.294030 ACGTCCAAAGTACTAGATATTTTTACG 57.706 33.333 0.00 9.12 36.43 3.18
739 765 6.347696 TGAAGGAAAAACGTCCAAAGTACTA 58.652 36.000 0.00 0.00 40.48 1.82
740 766 5.187687 TGAAGGAAAAACGTCCAAAGTACT 58.812 37.500 0.00 0.00 40.48 2.73
741 767 5.488645 TGAAGGAAAAACGTCCAAAGTAC 57.511 39.130 0.00 0.00 40.48 2.73
749 775 6.699895 AAAGTTGTTTGAAGGAAAAACGTC 57.300 33.333 0.00 0.00 39.81 4.34
811 837 3.330701 TGGCCTCTGAAAACAAGGTCTAT 59.669 43.478 3.32 0.00 35.76 1.98
818 844 2.746279 TCCTTGGCCTCTGAAAACAA 57.254 45.000 3.32 0.00 0.00 2.83
820 846 4.119862 GTTTTTCCTTGGCCTCTGAAAAC 58.880 43.478 19.57 16.97 36.68 2.43
830 856 3.804325 GCTCTTTTCAGTTTTTCCTTGGC 59.196 43.478 0.00 0.00 0.00 4.52
832 858 5.009854 TGGCTCTTTTCAGTTTTTCCTTG 57.990 39.130 0.00 0.00 0.00 3.61
910 944 2.110901 AGAGAAACTCGCGTCTCCTA 57.889 50.000 17.79 0.00 41.07 2.94
1026 3629 2.126149 AGAGTGCGCGCTCTTCTG 60.126 61.111 40.28 0.00 42.69 3.02
1080 3683 1.228988 TGACCTGGAGCTGAGAGCA 60.229 57.895 0.00 0.00 45.56 4.26
1107 3713 1.590259 GATCGAAGAGTGAGGCGGC 60.590 63.158 0.00 0.00 43.63 6.53
1110 3716 1.590259 GGCGATCGAAGAGTGAGGC 60.590 63.158 21.57 0.00 43.63 4.70
1111 3717 0.526524 GTGGCGATCGAAGAGTGAGG 60.527 60.000 21.57 0.00 43.63 3.86
1112 3718 0.526524 GGTGGCGATCGAAGAGTGAG 60.527 60.000 21.57 0.00 43.63 3.51
1113 3719 1.511305 GGTGGCGATCGAAGAGTGA 59.489 57.895 21.57 0.00 43.63 3.41
1114 3720 1.519455 GGGTGGCGATCGAAGAGTG 60.519 63.158 21.57 0.00 43.63 3.51
1115 3721 2.722201 GGGGTGGCGATCGAAGAGT 61.722 63.158 21.57 0.00 43.63 3.24
1117 3723 2.363795 AGGGGTGGCGATCGAAGA 60.364 61.111 21.57 0.00 45.75 2.87
1118 3724 2.107141 GAGGGGTGGCGATCGAAG 59.893 66.667 21.57 0.00 0.00 3.79
1119 3725 3.467226 GGAGGGGTGGCGATCGAA 61.467 66.667 21.57 2.52 0.00 3.71
1120 3726 3.976490 AAGGAGGGGTGGCGATCGA 62.976 63.158 21.57 0.00 0.00 3.59
1122 3728 1.700042 ATCAAGGAGGGGTGGCGATC 61.700 60.000 0.00 0.00 0.00 3.69
1123 3729 1.694169 ATCAAGGAGGGGTGGCGAT 60.694 57.895 0.00 0.00 0.00 4.58
1125 3731 1.987807 ATGATCAAGGAGGGGTGGCG 61.988 60.000 0.00 0.00 0.00 5.69
1144 3753 7.832187 CCCTTATTACCTCAATTAAACAGGTCA 59.168 37.037 6.63 0.00 41.09 4.02
1147 3756 6.549736 CCCCCTTATTACCTCAATTAAACAGG 59.450 42.308 0.00 0.00 0.00 4.00
1155 3764 4.542525 TGTTCACCCCCTTATTACCTCAAT 59.457 41.667 0.00 0.00 0.00 2.57
1157 3766 3.533146 TGTTCACCCCCTTATTACCTCA 58.467 45.455 0.00 0.00 0.00 3.86
1158 3767 4.263594 TGTTGTTCACCCCCTTATTACCTC 60.264 45.833 0.00 0.00 0.00 3.85
1159 3768 3.658705 TGTTGTTCACCCCCTTATTACCT 59.341 43.478 0.00 0.00 0.00 3.08
1204 3814 1.398390 GATTCACTAAAGCGGCAGTGG 59.602 52.381 16.09 2.54 42.01 4.00
1226 3836 8.682936 AAGACACTTGAAATTTCACTACTGAT 57.317 30.769 20.35 3.14 36.83 2.90
1227 3837 8.506168 AAAGACACTTGAAATTTCACTACTGA 57.494 30.769 20.35 4.20 36.83 3.41
1228 3838 9.013490 CAAAAGACACTTGAAATTTCACTACTG 57.987 33.333 20.35 14.13 36.83 2.74
1229 3839 8.190784 CCAAAAGACACTTGAAATTTCACTACT 58.809 33.333 20.35 12.10 36.83 2.57
1246 3856 3.255642 GCCTGCTAATTCACCAAAAGACA 59.744 43.478 0.00 0.00 0.00 3.41
1251 3861 3.119531 CGAATGCCTGCTAATTCACCAAA 60.120 43.478 3.92 0.00 33.27 3.28
1259 3869 0.466189 CCCCACGAATGCCTGCTAAT 60.466 55.000 0.00 0.00 0.00 1.73
1264 3874 1.178534 AAACACCCCACGAATGCCTG 61.179 55.000 0.00 0.00 0.00 4.85
1268 3878 0.887387 ACCGAAACACCCCACGAATG 60.887 55.000 0.00 0.00 0.00 2.67
1284 3894 5.063438 CACCAACATCACTAGTAATTCACCG 59.937 44.000 0.00 0.00 0.00 4.94
1302 3912 1.537202 GCCAGTTCATCTGTCACCAAC 59.463 52.381 0.00 0.00 42.19 3.77
1310 3920 4.449131 ACATATCACTGCCAGTTCATCTG 58.551 43.478 0.00 0.00 43.27 2.90
1359 3977 6.106673 CACCGATTCAGAAATTACCACTAGT 58.893 40.000 0.00 0.00 0.00 2.57
1360 3978 5.006746 GCACCGATTCAGAAATTACCACTAG 59.993 44.000 0.00 0.00 0.00 2.57
1361 3979 4.873827 GCACCGATTCAGAAATTACCACTA 59.126 41.667 0.00 0.00 0.00 2.74
1362 3980 3.689649 GCACCGATTCAGAAATTACCACT 59.310 43.478 0.00 0.00 0.00 4.00
1363 3981 3.438781 TGCACCGATTCAGAAATTACCAC 59.561 43.478 0.00 0.00 0.00 4.16
1364 3982 3.680490 TGCACCGATTCAGAAATTACCA 58.320 40.909 0.00 0.00 0.00 3.25
1365 3983 4.156008 ACTTGCACCGATTCAGAAATTACC 59.844 41.667 0.00 0.00 0.00 2.85
1366 3984 5.122396 AGACTTGCACCGATTCAGAAATTAC 59.878 40.000 0.00 0.00 0.00 1.89
1379 3997 0.320771 AGGCTTACAGACTTGCACCG 60.321 55.000 0.00 0.00 17.74 4.94
1384 4002 7.660208 TCCTAAACTAAAAGGCTTACAGACTTG 59.340 37.037 13.28 3.32 44.35 3.16
1396 4017 8.573035 TGCAAACTGTATTCCTAAACTAAAAGG 58.427 33.333 0.00 0.00 0.00 3.11
1408 4029 7.996385 ACCAATACTAATGCAAACTGTATTCC 58.004 34.615 11.93 0.00 34.57 3.01
1426 4048 6.653320 TGACTTGTTCCATGTTAGACCAATAC 59.347 38.462 0.00 0.00 0.00 1.89
1428 4050 5.630121 TGACTTGTTCCATGTTAGACCAAT 58.370 37.500 0.00 0.00 0.00 3.16
1429 4051 5.042463 TGACTTGTTCCATGTTAGACCAA 57.958 39.130 0.00 0.00 0.00 3.67
1562 4188 7.646130 TGTTTATGTGGACAGTTTCGAATTTTC 59.354 33.333 0.00 0.00 0.00 2.29
1563 4189 7.484975 TGTTTATGTGGACAGTTTCGAATTTT 58.515 30.769 0.00 0.00 0.00 1.82
1564 4190 7.033530 TGTTTATGTGGACAGTTTCGAATTT 57.966 32.000 0.00 0.00 0.00 1.82
1565 4191 6.627395 TGTTTATGTGGACAGTTTCGAATT 57.373 33.333 0.00 0.00 0.00 2.17
1566 4192 6.611381 CATGTTTATGTGGACAGTTTCGAAT 58.389 36.000 0.00 0.00 0.00 3.34
1567 4193 5.561919 GCATGTTTATGTGGACAGTTTCGAA 60.562 40.000 0.00 0.00 36.65 3.71
1642 4268 4.380867 GCCCAATAAACCAAGTCACATCAG 60.381 45.833 0.00 0.00 0.00 2.90
1734 4361 0.951558 CAAACAGGCAGTGGTACCAC 59.048 55.000 33.72 33.72 46.50 4.16
1741 4368 3.055530 AGAGTATCCTCAAACAGGCAGTG 60.056 47.826 0.00 0.00 43.08 3.66
1774 4401 7.953005 TTATTTCAAATCATGGCAGAGGTTA 57.047 32.000 0.00 0.00 0.00 2.85
1931 4559 6.679392 GCTTTAACTGAACAGTAAGGCAAACA 60.679 38.462 7.90 0.00 41.58 2.83
2469 6687 0.676736 TCGTACCACTGTGCACATCA 59.323 50.000 22.00 0.00 0.00 3.07
2480 6698 0.672711 GGGCTTCACCTTCGTACCAC 60.673 60.000 0.00 0.00 39.10 4.16
2510 6742 1.595093 CCCAAGGCGGTTGTTGGATC 61.595 60.000 4.17 0.00 45.35 3.36
2536 6768 2.880890 CTGTAAGAATGCCTATGCCACC 59.119 50.000 0.00 0.00 34.07 4.61
2705 6938 4.520111 TCACAAGAACATCCATGACAAAGG 59.480 41.667 0.00 0.00 0.00 3.11
2769 7002 1.129064 TCCCGCGCGATTTTTACTTTC 59.871 47.619 34.63 0.00 0.00 2.62
3013 7249 0.172803 CTTTCAGGGCTCATGCAAGC 59.827 55.000 1.52 1.52 41.91 4.01
3042 7278 4.087507 GCAACATAAACGCGGTTACTTTTC 59.912 41.667 20.55 6.01 0.00 2.29
3211 7447 5.622180 TCACTGGCTAGTACCATAGACTAG 58.378 45.833 0.95 5.62 46.18 2.57
3373 7623 7.233632 ACAACCAGCCATGTCAATATACATAT 58.766 34.615 0.00 0.00 38.01 1.78
3406 7658 3.803021 GCACCAGGCATCAACAAATGAAA 60.803 43.478 0.00 0.00 42.54 2.69
3428 7681 6.806751 TCCGAAGTCATTCTAAGTAGATTGG 58.193 40.000 9.30 0.00 35.50 3.16
3450 7706 2.545537 AAGAGTCGGTCCAAACTTCC 57.454 50.000 0.00 0.00 0.00 3.46
3489 7745 1.135575 CGGCAGAAAACTCATCAAGGC 60.136 52.381 0.00 0.00 0.00 4.35
3595 7855 6.507023 AGACAAAAAGTGGAGCAAAATACTG 58.493 36.000 0.00 0.00 0.00 2.74
3597 7857 8.865590 TTTAGACAAAAAGTGGAGCAAAATAC 57.134 30.769 0.00 0.00 0.00 1.89
3601 7861 5.127031 AGCTTTAGACAAAAAGTGGAGCAAA 59.873 36.000 0.00 0.00 38.48 3.68
3602 7862 4.644685 AGCTTTAGACAAAAAGTGGAGCAA 59.355 37.500 0.00 0.00 38.48 3.91
3603 7863 4.036734 CAGCTTTAGACAAAAAGTGGAGCA 59.963 41.667 0.00 0.00 38.48 4.26
3622 7882 2.673341 TGTCGAGTCGCTCCAGCT 60.673 61.111 7.92 0.00 39.32 4.24
3635 7895 1.012086 ATGCATGCTGCTTAGTGTCG 58.988 50.000 20.33 0.00 45.31 4.35
3636 7896 2.470196 CATGCATGCTGCTTAGTGTC 57.530 50.000 20.33 0.00 45.31 3.67
3696 8325 6.875948 AGTGAACAAACACATGCAACTATA 57.124 33.333 0.00 0.00 42.45 1.31
3697 8326 5.772825 AGTGAACAAACACATGCAACTAT 57.227 34.783 0.00 0.00 42.45 2.12
3698 8327 5.124617 TGAAGTGAACAAACACATGCAACTA 59.875 36.000 0.00 0.00 42.45 2.24
3699 8328 4.082300 TGAAGTGAACAAACACATGCAACT 60.082 37.500 0.00 0.00 42.45 3.16
3700 8329 4.172505 TGAAGTGAACAAACACATGCAAC 58.827 39.130 0.00 0.00 42.45 4.17
3701 8330 4.422840 CTGAAGTGAACAAACACATGCAA 58.577 39.130 0.00 0.00 42.45 4.08
3755 8384 2.027377 CACTCAGACTTGGGATTGAGCT 60.027 50.000 0.00 0.00 40.47 4.09
3761 8390 1.599047 CGCCACTCAGACTTGGGAT 59.401 57.895 0.00 0.00 33.01 3.85
3767 8396 0.540830 AAGAGACCGCCACTCAGACT 60.541 55.000 0.00 0.00 36.91 3.24
3794 8423 5.103290 AGTAAAATTACAACCGCACAGTG 57.897 39.130 6.13 0.00 36.12 3.66
3848 8477 1.000385 CTTGATTTTGCGCAAGGTGGA 60.000 47.619 23.68 4.96 38.22 4.02
3849 8478 1.000385 TCTTGATTTTGCGCAAGGTGG 60.000 47.619 23.68 12.29 41.31 4.61
3876 8508 0.794473 CCGGGCTACTTGTTTTCGAC 59.206 55.000 0.00 0.00 0.00 4.20
3906 8538 6.197364 ACGGTGTCAAACAATAGAACAAAA 57.803 33.333 0.00 0.00 0.00 2.44
3948 8580 9.539825 CTTTAACACTACATGCTTCATAGATCT 57.460 33.333 0.00 0.00 0.00 2.75
3993 8631 1.134946 CGGTCTCCATTGGCATTTTCC 59.865 52.381 0.00 0.00 0.00 3.13
3994 8632 2.091541 TCGGTCTCCATTGGCATTTTC 58.908 47.619 0.00 0.00 0.00 2.29
3995 8633 2.094675 CTCGGTCTCCATTGGCATTTT 58.905 47.619 0.00 0.00 0.00 1.82
3996 8634 1.755179 CTCGGTCTCCATTGGCATTT 58.245 50.000 0.00 0.00 0.00 2.32
3997 8635 0.749454 GCTCGGTCTCCATTGGCATT 60.749 55.000 0.00 0.00 0.00 3.56
3998 8636 1.153086 GCTCGGTCTCCATTGGCAT 60.153 57.895 0.00 0.00 0.00 4.40
3999 8637 1.913951 ATGCTCGGTCTCCATTGGCA 61.914 55.000 0.00 0.00 0.00 4.92
4000 8638 0.749454 AATGCTCGGTCTCCATTGGC 60.749 55.000 0.00 0.00 0.00 4.52
4001 8639 2.158900 ACTAATGCTCGGTCTCCATTGG 60.159 50.000 0.00 0.00 34.74 3.16
4002 8640 2.868583 CACTAATGCTCGGTCTCCATTG 59.131 50.000 0.00 0.00 32.07 2.82
4003 8641 2.766263 TCACTAATGCTCGGTCTCCATT 59.234 45.455 0.00 0.00 34.01 3.16
4004 8642 2.363680 CTCACTAATGCTCGGTCTCCAT 59.636 50.000 0.00 0.00 0.00 3.41
4005 8643 1.751351 CTCACTAATGCTCGGTCTCCA 59.249 52.381 0.00 0.00 0.00 3.86
4006 8644 1.537135 GCTCACTAATGCTCGGTCTCC 60.537 57.143 0.00 0.00 0.00 3.71
4007 8645 1.407258 AGCTCACTAATGCTCGGTCTC 59.593 52.381 0.00 0.00 33.90 3.36
4008 8646 1.407258 GAGCTCACTAATGCTCGGTCT 59.593 52.381 9.40 0.00 44.72 3.85
4009 8647 1.846541 GAGCTCACTAATGCTCGGTC 58.153 55.000 9.40 0.00 44.72 4.79
4014 8652 4.408182 AAATACCGAGCTCACTAATGCT 57.592 40.909 15.40 0.00 42.82 3.79
4015 8653 6.598753 TTTAAATACCGAGCTCACTAATGC 57.401 37.500 15.40 0.00 0.00 3.56
4081 8719 6.874664 ACCACGTTTAAGTTTCCACAATTTTT 59.125 30.769 0.00 0.00 0.00 1.94
4082 8720 6.399743 ACCACGTTTAAGTTTCCACAATTTT 58.600 32.000 0.00 0.00 0.00 1.82
4083 8721 5.968254 ACCACGTTTAAGTTTCCACAATTT 58.032 33.333 0.00 0.00 0.00 1.82
4084 8722 5.450826 GGACCACGTTTAAGTTTCCACAATT 60.451 40.000 0.00 0.00 0.00 2.32
4085 8723 4.037089 GGACCACGTTTAAGTTTCCACAAT 59.963 41.667 0.00 0.00 0.00 2.71
4086 8724 3.377798 GGACCACGTTTAAGTTTCCACAA 59.622 43.478 0.00 0.00 0.00 3.33
4087 8725 2.944349 GGACCACGTTTAAGTTTCCACA 59.056 45.455 0.00 0.00 0.00 4.17
4088 8726 2.032636 CGGACCACGTTTAAGTTTCCAC 60.033 50.000 0.00 0.00 37.93 4.02
4089 8727 2.211806 CGGACCACGTTTAAGTTTCCA 58.788 47.619 0.00 0.00 37.93 3.53
4090 8728 1.069703 GCGGACCACGTTTAAGTTTCC 60.070 52.381 0.00 0.00 46.52 3.13
4091 8729 1.598601 TGCGGACCACGTTTAAGTTTC 59.401 47.619 0.00 0.00 46.52 2.78
4092 8730 1.600485 CTGCGGACCACGTTTAAGTTT 59.400 47.619 0.00 0.00 46.52 2.66
4093 8731 1.223187 CTGCGGACCACGTTTAAGTT 58.777 50.000 0.00 0.00 46.52 2.66
4094 8732 0.601841 CCTGCGGACCACGTTTAAGT 60.602 55.000 0.00 0.00 46.52 2.24
4095 8733 0.320073 TCCTGCGGACCACGTTTAAG 60.320 55.000 0.00 0.00 46.52 1.85
4096 8734 0.106335 TTCCTGCGGACCACGTTTAA 59.894 50.000 0.00 0.00 46.52 1.52
4097 8735 0.600782 GTTCCTGCGGACCACGTTTA 60.601 55.000 0.00 0.00 46.52 2.01
4098 8736 1.890510 GTTCCTGCGGACCACGTTT 60.891 57.895 0.00 0.00 46.52 3.60
4099 8737 2.280592 GTTCCTGCGGACCACGTT 60.281 61.111 0.00 0.00 46.52 3.99
4100 8738 4.657824 CGTTCCTGCGGACCACGT 62.658 66.667 11.28 0.00 46.52 4.49
4102 8740 3.041940 CACGTTCCTGCGGACCAC 61.042 66.667 0.00 0.00 35.98 4.16
4103 8741 3.542676 ACACGTTCCTGCGGACCA 61.543 61.111 0.00 0.00 35.98 4.02
4104 8742 2.981977 TTCACACGTTCCTGCGGACC 62.982 60.000 0.00 0.00 35.98 4.46
4105 8743 1.155424 TTTCACACGTTCCTGCGGAC 61.155 55.000 0.00 0.00 35.98 4.79
4106 8744 0.462225 TTTTCACACGTTCCTGCGGA 60.462 50.000 0.00 0.00 35.98 5.54
4107 8745 0.378962 TTTTTCACACGTTCCTGCGG 59.621 50.000 0.00 0.00 35.98 5.69
4108 8746 2.032030 AGATTTTTCACACGTTCCTGCG 60.032 45.455 0.00 0.00 37.94 5.18
4109 8747 3.626028 AGATTTTTCACACGTTCCTGC 57.374 42.857 0.00 0.00 0.00 4.85
4110 8748 6.033341 TCAAAAGATTTTTCACACGTTCCTG 58.967 36.000 0.00 0.00 0.00 3.86
4111 8749 6.202516 TCAAAAGATTTTTCACACGTTCCT 57.797 33.333 0.00 0.00 0.00 3.36
4112 8750 6.879188 TTCAAAAGATTTTTCACACGTTCC 57.121 33.333 0.00 0.00 0.00 3.62
4115 8753 9.581099 AGTATTTTCAAAAGATTTTTCACACGT 57.419 25.926 0.00 0.00 0.00 4.49
4116 8754 9.833894 CAGTATTTTCAAAAGATTTTTCACACG 57.166 29.630 0.00 0.00 0.00 4.49
4128 8766 9.965824 ACCTACAAATCACAGTATTTTCAAAAG 57.034 29.630 0.00 0.00 0.00 2.27
4130 8768 9.743057 CAACCTACAAATCACAGTATTTTCAAA 57.257 29.630 0.00 0.00 0.00 2.69
4131 8769 8.908903 ACAACCTACAAATCACAGTATTTTCAA 58.091 29.630 0.00 0.00 0.00 2.69
4132 8770 8.458573 ACAACCTACAAATCACAGTATTTTCA 57.541 30.769 0.00 0.00 0.00 2.69
4133 8771 9.821662 GTACAACCTACAAATCACAGTATTTTC 57.178 33.333 0.00 0.00 0.00 2.29
4134 8772 9.344772 TGTACAACCTACAAATCACAGTATTTT 57.655 29.630 0.00 0.00 0.00 1.82
4135 8773 8.911918 TGTACAACCTACAAATCACAGTATTT 57.088 30.769 0.00 0.00 0.00 1.40
4136 8774 8.911918 TTGTACAACCTACAAATCACAGTATT 57.088 30.769 3.59 0.00 34.84 1.89
4137 8775 8.911918 TTTGTACAACCTACAAATCACAGTAT 57.088 30.769 8.07 0.00 41.00 2.12
4138 8776 8.734218 TTTTGTACAACCTACAAATCACAGTA 57.266 30.769 8.07 0.00 44.00 2.74
4139 8777 7.633193 TTTTGTACAACCTACAAATCACAGT 57.367 32.000 8.07 0.00 44.00 3.55
4161 8799 1.346395 GGGCCGGGATTTTGTCTTTTT 59.654 47.619 2.18 0.00 0.00 1.94
4162 8800 0.973632 GGGCCGGGATTTTGTCTTTT 59.026 50.000 2.18 0.00 0.00 2.27
4163 8801 0.178947 TGGGCCGGGATTTTGTCTTT 60.179 50.000 2.18 0.00 0.00 2.52
4164 8802 0.611896 CTGGGCCGGGATTTTGTCTT 60.612 55.000 3.77 0.00 0.00 3.01
4165 8803 1.000896 CTGGGCCGGGATTTTGTCT 60.001 57.895 3.77 0.00 0.00 3.41
4166 8804 2.710902 GCTGGGCCGGGATTTTGTC 61.711 63.158 15.62 0.00 0.00 3.18
4167 8805 2.679996 GCTGGGCCGGGATTTTGT 60.680 61.111 15.62 0.00 0.00 2.83
4168 8806 1.616091 ATTGCTGGGCCGGGATTTTG 61.616 55.000 15.62 0.00 0.00 2.44
4169 8807 0.032615 TATTGCTGGGCCGGGATTTT 60.033 50.000 15.62 2.07 0.00 1.82
4170 8808 0.032615 TTATTGCTGGGCCGGGATTT 60.033 50.000 15.62 4.75 0.00 2.17
4171 8809 0.032615 TTTATTGCTGGGCCGGGATT 60.033 50.000 15.62 10.61 0.00 3.01
4172 8810 0.032615 TTTTATTGCTGGGCCGGGAT 60.033 50.000 15.62 4.31 0.00 3.85
4173 8811 0.968393 GTTTTATTGCTGGGCCGGGA 60.968 55.000 15.62 8.97 0.00 5.14
4174 8812 1.254284 TGTTTTATTGCTGGGCCGGG 61.254 55.000 15.62 2.88 0.00 5.73
4175 8813 0.108851 GTGTTTTATTGCTGGGCCGG 60.109 55.000 8.39 8.39 0.00 6.13
4176 8814 0.108851 GGTGTTTTATTGCTGGGCCG 60.109 55.000 0.00 0.00 0.00 6.13
4177 8815 0.249120 GGGTGTTTTATTGCTGGGCC 59.751 55.000 0.00 0.00 0.00 5.80
4178 8816 0.108851 CGGGTGTTTTATTGCTGGGC 60.109 55.000 0.00 0.00 0.00 5.36
4179 8817 0.108851 GCGGGTGTTTTATTGCTGGG 60.109 55.000 0.00 0.00 0.00 4.45
4180 8818 0.108851 GGCGGGTGTTTTATTGCTGG 60.109 55.000 0.00 0.00 0.00 4.85
4181 8819 0.108851 GGGCGGGTGTTTTATTGCTG 60.109 55.000 0.00 0.00 0.00 4.41
4182 8820 0.540830 TGGGCGGGTGTTTTATTGCT 60.541 50.000 0.00 0.00 0.00 3.91
4183 8821 0.534873 ATGGGCGGGTGTTTTATTGC 59.465 50.000 0.00 0.00 0.00 3.56
4184 8822 3.326836 AAATGGGCGGGTGTTTTATTG 57.673 42.857 0.00 0.00 0.00 1.90
4185 8823 4.773149 TCTAAAATGGGCGGGTGTTTTATT 59.227 37.500 0.00 0.00 0.00 1.40
4186 8824 4.345854 TCTAAAATGGGCGGGTGTTTTAT 58.654 39.130 0.00 0.00 0.00 1.40
4187 8825 3.764218 TCTAAAATGGGCGGGTGTTTTA 58.236 40.909 0.00 0.00 0.00 1.52
4188 8826 2.599677 TCTAAAATGGGCGGGTGTTTT 58.400 42.857 0.00 0.00 0.00 2.43
4189 8827 2.296073 TCTAAAATGGGCGGGTGTTT 57.704 45.000 0.00 0.00 0.00 2.83
4190 8828 2.296073 TTCTAAAATGGGCGGGTGTT 57.704 45.000 0.00 0.00 0.00 3.32
4191 8829 2.296073 TTTCTAAAATGGGCGGGTGT 57.704 45.000 0.00 0.00 0.00 4.16
4192 8830 3.242936 CGTATTTCTAAAATGGGCGGGTG 60.243 47.826 0.00 0.00 0.00 4.61
4193 8831 2.946990 CGTATTTCTAAAATGGGCGGGT 59.053 45.455 0.00 0.00 0.00 5.28
4194 8832 2.946990 ACGTATTTCTAAAATGGGCGGG 59.053 45.455 0.00 0.00 0.00 6.13
4195 8833 5.934935 ATACGTATTTCTAAAATGGGCGG 57.065 39.130 1.14 0.00 0.00 6.13
4196 8834 7.375017 GTCAAATACGTATTTCTAAAATGGGCG 59.625 37.037 26.65 13.38 33.88 6.13
4197 8835 8.403236 AGTCAAATACGTATTTCTAAAATGGGC 58.597 33.333 26.65 16.07 33.88 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.