Multiple sequence alignment - TraesCS7D01G423700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G423700 chr7D 100.000 4896 0 0 1 4896 544471407 544466512 0.000000e+00 9042.0
1 TraesCS7D01G423700 chr7B 88.926 2962 216 53 50 2956 587913944 587911040 0.000000e+00 3550.0
2 TraesCS7D01G423700 chr7B 86.771 703 60 20 3175 3856 587910920 587910230 0.000000e+00 752.0
3 TraesCS7D01G423700 chr7B 85.985 685 43 26 3865 4517 587909603 587908940 0.000000e+00 684.0
4 TraesCS7D01G423700 chr7B 91.379 58 5 0 573 630 750058055 750058112 4.060000e-11 80.5
5 TraesCS7D01G423700 chr7B 95.000 40 0 2 2955 2993 587911022 587910984 1.470000e-05 62.1
6 TraesCS7D01G423700 chr7A 88.704 2346 151 60 666 2955 625740997 625738710 0.000000e+00 2760.0
7 TraesCS7D01G423700 chr7A 90.827 1112 66 18 3175 4266 625738466 625737371 0.000000e+00 1456.0
8 TraesCS7D01G423700 chr7A 84.786 677 90 8 1 666 625741945 625741271 0.000000e+00 667.0
9 TraesCS7D01G423700 chr7A 86.772 189 19 3 4263 4445 625737239 625737051 6.420000e-49 206.0
10 TraesCS7D01G423700 chr7A 91.011 89 8 0 3017 3105 486930028 486929940 2.390000e-23 121.0
11 TraesCS7D01G423700 chr7A 86.667 105 10 4 571 673 9736291 9736189 4.010000e-21 113.0
12 TraesCS7D01G423700 chr2A 92.222 90 7 0 3017 3106 101698359 101698270 1.430000e-25 128.0
13 TraesCS7D01G423700 chr6D 85.246 122 16 2 570 690 156450396 156450516 1.850000e-24 124.0
14 TraesCS7D01G423700 chr3D 91.011 89 8 0 3017 3105 288550546 288550458 2.390000e-23 121.0
15 TraesCS7D01G423700 chr3D 87.755 98 10 2 3010 3105 347585330 347585233 4.010000e-21 113.0
16 TraesCS7D01G423700 chr6A 88.776 98 9 2 3010 3105 27188994 27188897 8.610000e-23 119.0
17 TraesCS7D01G423700 chr6A 84.167 120 16 3 572 690 209898846 209898963 4.010000e-21 113.0
18 TraesCS7D01G423700 chr4D 90.110 91 9 0 3016 3106 41217591 41217681 8.610000e-23 119.0
19 TraesCS7D01G423700 chr4B 88.776 98 9 2 3010 3105 510849152 510849249 8.610000e-23 119.0
20 TraesCS7D01G423700 chr2D 84.874 119 15 3 571 689 601173792 601173677 3.100000e-22 117.0
21 TraesCS7D01G423700 chrUn 87.755 98 12 0 3017 3114 96471118 96471021 1.110000e-21 115.0
22 TraesCS7D01G423700 chr1A 87.879 99 10 2 3010 3106 555641204 555641106 1.110000e-21 115.0
23 TraesCS7D01G423700 chr2B 89.091 55 5 1 572 626 131580861 131580914 3.160000e-07 67.6
24 TraesCS7D01G423700 chr3B 82.051 78 12 1 574 651 76427749 76427674 1.140000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G423700 chr7D 544466512 544471407 4895 True 9042.000 9042 100.00000 1 4896 1 chr7D.!!$R1 4895
1 TraesCS7D01G423700 chr7B 587908940 587913944 5004 True 1262.025 3550 89.17050 50 4517 4 chr7B.!!$R1 4467
2 TraesCS7D01G423700 chr7A 625737051 625741945 4894 True 1272.250 2760 87.77225 1 4445 4 chr7A.!!$R3 4444

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
225 227 0.109532 TGGACAAGGGCGACAATTCA 59.890 50.0 0.00 0.0 0.00 2.57 F
434 444 0.326264 AGATTGGAGCCACTTTCGCT 59.674 50.0 0.00 0.0 39.95 4.93 F
1582 1945 0.178992 TGGCTGGTTTTGGTCAGAGG 60.179 55.0 0.00 0.0 33.11 3.69 F
1623 1989 0.179156 TGAAATCGGACGACGGTAGC 60.179 55.0 0.00 0.0 44.45 3.58 F
1866 2241 0.179189 GCTAAATGCGTCGCTTTGCT 60.179 50.0 19.50 7.0 0.00 3.91 F
1873 2248 0.519175 GCGTCGCTTTGCTGTGTATG 60.519 55.0 10.68 0.0 0.00 2.39 F
3575 4027 0.538746 TCGTTTCTTTTCCTGCCCCC 60.539 55.0 0.00 0.0 0.00 5.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1286 1618 0.178992 TCACTCCAGCCCACCAAAAG 60.179 55.000 0.00 0.00 0.00 2.27 R
1973 2351 0.456312 GGTAGCAGAACTCGTGTCCG 60.456 60.000 0.00 0.00 0.00 4.79 R
2721 3102 0.744281 CTCTCCCTCTTCTTCGGCTC 59.256 60.000 0.00 0.00 0.00 4.70 R
3265 3713 1.824230 TGCAGCATAAAATCCCCACAC 59.176 47.619 0.00 0.00 0.00 3.82 R
3793 4256 0.470766 AAACTGTAACCACGGCTGGA 59.529 50.000 9.53 0.00 40.55 3.86 R
3860 4323 2.042464 AGCTTCTTCACCTGACACTGA 58.958 47.619 0.00 0.00 0.00 3.41 R
4794 6031 0.030101 GCGTGGTTGCTGCAACTTTA 59.970 50.000 35.76 23.23 43.14 1.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.955771 TCTCAACCGCTTTGTTTACAC 57.044 42.857 0.00 0.00 36.49 2.90
26 27 2.614983 TCTCAACCGCTTTGTTTACACC 59.385 45.455 0.00 0.00 36.49 4.16
44 45 2.022129 CGTCCGTTGTCTCACTGCC 61.022 63.158 0.00 0.00 0.00 4.85
51 52 1.816863 TTGTCTCACTGCCCGTCCTC 61.817 60.000 0.00 0.00 0.00 3.71
103 104 0.391597 AGTGGTTCCGACATCGTGTT 59.608 50.000 0.00 0.00 37.74 3.32
152 154 5.927819 CTTAAGGAGGATTTCAGCTCATCT 58.072 41.667 0.00 0.00 0.00 2.90
153 155 3.842007 AGGAGGATTTCAGCTCATCTG 57.158 47.619 0.00 0.00 44.21 2.90
212 214 1.336440 CGTTTGGTTGCAGATGGACAA 59.664 47.619 0.00 0.00 0.00 3.18
222 224 0.620556 AGATGGACAAGGGCGACAAT 59.379 50.000 0.00 0.00 0.00 2.71
225 227 0.109532 TGGACAAGGGCGACAATTCA 59.890 50.000 0.00 0.00 0.00 2.57
231 233 0.678048 AGGGCGACAATTCAAGCTCC 60.678 55.000 0.00 0.00 0.00 4.70
255 257 3.774336 TCCCCTAGTGGCCCGGAT 61.774 66.667 0.73 0.00 0.00 4.18
285 287 0.988145 CCATGCCCTCCCCAGTTAGA 60.988 60.000 0.00 0.00 0.00 2.10
286 288 1.143813 CATGCCCTCCCCAGTTAGAT 58.856 55.000 0.00 0.00 0.00 1.98
295 297 1.407656 CCCAGTTAGATAGCGGGGCA 61.408 60.000 0.00 0.00 35.46 5.36
323 325 0.331954 TTCTCGACACCTCTAGGCCT 59.668 55.000 11.78 11.78 39.32 5.19
364 368 3.910490 GCTTTTGCCCACACGCCA 61.910 61.111 0.00 0.00 40.15 5.69
391 395 3.774528 CGCAGCTACCAGCCTCCA 61.775 66.667 0.00 0.00 43.77 3.86
426 436 1.478105 GGATCATGCAGATTGGAGCCA 60.478 52.381 0.00 0.00 37.00 4.75
434 444 0.326264 AGATTGGAGCCACTTTCGCT 59.674 50.000 0.00 0.00 39.95 4.93
444 454 1.016130 CACTTTCGCTCACCGCTGAT 61.016 55.000 0.00 0.00 36.73 2.90
448 458 2.125952 CGCTCACCGCTGATGACA 60.126 61.111 0.00 0.00 36.13 3.58
463 473 0.976641 TGACAACAAGATCCTCCGCT 59.023 50.000 0.00 0.00 0.00 5.52
552 570 1.384989 GGAATCGAGGAGTCCGAGCA 61.385 60.000 2.76 0.00 37.08 4.26
640 661 7.534085 TCATTCATTTCAGTCCGTACATAAC 57.466 36.000 0.00 0.00 0.00 1.89
686 980 8.738645 ATCTTTATATTTGTGAACTGAGGGAC 57.261 34.615 0.00 0.00 0.00 4.46
694 988 5.416271 TGTGAACTGAGGGACTAATAACC 57.584 43.478 0.00 0.00 41.55 2.85
695 989 5.091552 TGTGAACTGAGGGACTAATAACCT 58.908 41.667 0.00 0.00 41.55 3.50
696 990 5.046591 TGTGAACTGAGGGACTAATAACCTG 60.047 44.000 0.00 0.00 41.55 4.00
697 991 4.469945 TGAACTGAGGGACTAATAACCTGG 59.530 45.833 0.00 0.00 41.55 4.45
700 994 4.016479 ACTGAGGGACTAATAACCTGGAGA 60.016 45.833 0.00 0.00 41.55 3.71
702 996 5.347124 TGAGGGACTAATAACCTGGAGAAA 58.653 41.667 0.00 0.00 41.55 2.52
873 1185 5.264395 AGAAAAGAGAAGAGGGAGAGAGAG 58.736 45.833 0.00 0.00 0.00 3.20
896 1208 0.534652 GAGAGGGTGGCTGCATCATC 60.535 60.000 0.50 0.00 0.00 2.92
897 1209 1.225426 GAGGGTGGCTGCATCATCA 59.775 57.895 0.50 0.00 0.00 3.07
898 1210 1.077212 AGGGTGGCTGCATCATCAC 60.077 57.895 0.50 0.00 0.00 3.06
994 1317 2.641746 CCTCACCTCTCCCCTCCCT 61.642 68.421 0.00 0.00 0.00 4.20
995 1318 1.075600 CTCACCTCTCCCCTCCCTC 60.076 68.421 0.00 0.00 0.00 4.30
996 1319 1.547755 TCACCTCTCCCCTCCCTCT 60.548 63.158 0.00 0.00 0.00 3.69
997 1320 1.075600 CACCTCTCCCCTCCCTCTC 60.076 68.421 0.00 0.00 0.00 3.20
998 1321 2.329399 ACCTCTCCCCTCCCTCTCC 61.329 68.421 0.00 0.00 0.00 3.71
999 1322 2.612251 CTCTCCCCTCCCTCTCCC 59.388 72.222 0.00 0.00 0.00 4.30
1004 1327 2.197324 CCCTCCCTCTCCCTCTCG 59.803 72.222 0.00 0.00 0.00 4.04
1005 1328 2.695970 CCCTCCCTCTCCCTCTCGT 61.696 68.421 0.00 0.00 0.00 4.18
1010 1335 1.152839 CCTCTCCCTCTCGTCTCCC 60.153 68.421 0.00 0.00 0.00 4.30
1133 1458 2.935481 TCTGCTGTCCCCTTGGGG 60.935 66.667 18.54 18.54 44.51 4.96
1173 1498 2.042230 GACCCGCTTCTCCCCCTA 60.042 66.667 0.00 0.00 0.00 3.53
1203 1528 3.827722 TGGGTTTCGGAAGAGATTTTGT 58.172 40.909 0.00 0.00 43.69 2.83
1244 1576 2.810012 GCTCCGCGGATTTCGTTCC 61.810 63.158 31.19 5.91 41.72 3.62
1297 1629 4.362476 CCGCTGCTTTTGGTGGGC 62.362 66.667 0.00 0.00 0.00 5.36
1309 1641 1.077429 GGTGGGCTGGAGTGATTCC 60.077 63.158 0.00 0.00 46.98 3.01
1318 1650 2.627699 CTGGAGTGATTCCTAGAGCTCC 59.372 54.545 10.93 0.00 46.92 4.70
1374 1713 3.202706 GATTTGACGGGCGGCTCC 61.203 66.667 9.56 0.00 0.00 4.70
1375 1714 3.969250 GATTTGACGGGCGGCTCCA 62.969 63.158 9.56 1.39 36.21 3.86
1452 1802 4.569015 GGGGCTGGTTAGGAGTTTTGATTA 60.569 45.833 0.00 0.00 0.00 1.75
1484 1835 1.002087 GTGACCACCCAGATCGACTTT 59.998 52.381 0.00 0.00 0.00 2.66
1486 1843 2.901192 TGACCACCCAGATCGACTTTTA 59.099 45.455 0.00 0.00 0.00 1.52
1519 1876 8.592105 TTTTGCTTTACTGATTTCCATTTCTG 57.408 30.769 0.00 0.00 0.00 3.02
1520 1877 6.899393 TGCTTTACTGATTTCCATTTCTGT 57.101 33.333 0.00 0.00 0.00 3.41
1535 1892 6.371548 TCCATTTCTGTTGTTAGGATTTCTCG 59.628 38.462 0.00 0.00 0.00 4.04
1541 1898 7.383687 TCTGTTGTTAGGATTTCTCGTGTTAT 58.616 34.615 0.00 0.00 0.00 1.89
1543 1900 7.156000 TGTTGTTAGGATTTCTCGTGTTATGA 58.844 34.615 0.00 0.00 0.00 2.15
1544 1901 7.822334 TGTTGTTAGGATTTCTCGTGTTATGAT 59.178 33.333 0.00 0.00 0.00 2.45
1548 1905 9.704098 GTTAGGATTTCTCGTGTTATGATTTTC 57.296 33.333 0.00 0.00 0.00 2.29
1555 1918 8.554835 TTCTCGTGTTATGATTTTCATTGGTA 57.445 30.769 0.00 0.00 38.26 3.25
1560 1923 7.857389 CGTGTTATGATTTTCATTGGTAGGATG 59.143 37.037 0.00 0.00 38.26 3.51
1570 1933 0.327480 TGGTAGGATGGATGGCTGGT 60.327 55.000 0.00 0.00 0.00 4.00
1582 1945 0.178992 TGGCTGGTTTTGGTCAGAGG 60.179 55.000 0.00 0.00 33.11 3.69
1617 1983 1.022982 GGGGGTTGAAATCGGACGAC 61.023 60.000 0.00 0.00 0.00 4.34
1623 1989 0.179156 TGAAATCGGACGACGGTAGC 60.179 55.000 0.00 0.00 44.45 3.58
1672 2038 1.636519 TGGGCCGGGATTCTCTTTTTA 59.363 47.619 2.18 0.00 0.00 1.52
1673 2039 2.298610 GGGCCGGGATTCTCTTTTTAG 58.701 52.381 2.18 0.00 0.00 1.85
1674 2040 2.356844 GGGCCGGGATTCTCTTTTTAGT 60.357 50.000 2.18 0.00 0.00 2.24
1675 2041 3.353557 GGCCGGGATTCTCTTTTTAGTT 58.646 45.455 2.18 0.00 0.00 2.24
1676 2042 3.762288 GGCCGGGATTCTCTTTTTAGTTT 59.238 43.478 2.18 0.00 0.00 2.66
1822 2197 4.757019 AGACTGTCATCATTCATCAGCT 57.243 40.909 10.88 0.00 0.00 4.24
1825 2200 5.363292 AGACTGTCATCATTCATCAGCTACT 59.637 40.000 10.88 0.00 0.00 2.57
1829 2204 5.930569 TGTCATCATTCATCAGCTACTATGC 59.069 40.000 0.00 0.00 0.00 3.14
1842 2217 6.491403 TCAGCTACTATGCTCTGTATTGATGA 59.509 38.462 0.00 0.00 41.98 2.92
1845 2220 7.871973 AGCTACTATGCTCTGTATTGATGAAAG 59.128 37.037 0.00 0.00 39.34 2.62
1854 2229 7.642978 GCTCTGTATTGATGAAAGTGCTAAATG 59.357 37.037 0.00 0.00 0.00 2.32
1856 2231 6.257423 TGTATTGATGAAAGTGCTAAATGCG 58.743 36.000 0.00 0.00 46.63 4.73
1857 2232 4.764679 TTGATGAAAGTGCTAAATGCGT 57.235 36.364 0.00 0.00 46.63 5.24
1859 2234 2.873170 TGAAAGTGCTAAATGCGTCG 57.127 45.000 0.00 0.00 46.63 5.12
1860 2235 1.136085 TGAAAGTGCTAAATGCGTCGC 60.136 47.619 11.10 11.10 46.63 5.19
1861 2236 1.128692 GAAAGTGCTAAATGCGTCGCT 59.871 47.619 19.50 0.04 46.63 4.93
1865 2240 0.454285 TGCTAAATGCGTCGCTTTGC 60.454 50.000 19.50 17.65 46.63 3.68
1866 2241 0.179189 GCTAAATGCGTCGCTTTGCT 60.179 50.000 19.50 7.00 0.00 3.91
1867 2242 1.527696 CTAAATGCGTCGCTTTGCTG 58.472 50.000 19.50 8.36 0.00 4.41
1868 2243 0.871722 TAAATGCGTCGCTTTGCTGT 59.128 45.000 19.50 5.94 0.00 4.40
1869 2244 0.661187 AAATGCGTCGCTTTGCTGTG 60.661 50.000 19.50 0.00 0.00 3.66
1870 2245 1.785041 AATGCGTCGCTTTGCTGTGT 61.785 50.000 19.50 0.00 0.00 3.72
1871 2246 0.948623 ATGCGTCGCTTTGCTGTGTA 60.949 50.000 19.50 0.00 0.00 2.90
1872 2247 0.948623 TGCGTCGCTTTGCTGTGTAT 60.949 50.000 19.50 0.00 0.00 2.29
1873 2248 0.519175 GCGTCGCTTTGCTGTGTATG 60.519 55.000 10.68 0.00 0.00 2.39
1877 2252 1.804151 TCGCTTTGCTGTGTATGGAAC 59.196 47.619 0.00 0.00 0.00 3.62
1901 2276 9.905713 AACAGATATGCTATGTTTAGAAAGGAA 57.094 29.630 0.00 0.00 35.83 3.36
1902 2277 9.331282 ACAGATATGCTATGTTTAGAAAGGAAC 57.669 33.333 0.00 0.00 0.00 3.62
1973 2351 6.917477 TGTGATGAAAAGTTGCATCTGTTAAC 59.083 34.615 12.28 0.00 41.08 2.01
2070 2451 5.651530 TCTTTTGACCTCGACATACATCTC 58.348 41.667 0.00 0.00 0.00 2.75
2112 2493 2.359900 GTTACCTGCCCAATCTGTCTG 58.640 52.381 0.00 0.00 0.00 3.51
2127 2508 2.242196 CTGTCTGGATTACCCCCACAAT 59.758 50.000 0.00 0.00 34.81 2.71
2316 2697 1.260561 GTGTCGTCTCACGCAAACAAT 59.739 47.619 0.00 0.00 42.21 2.71
2331 2712 3.061848 AATCGCCCAAGTTGCCCG 61.062 61.111 0.00 2.25 0.00 6.13
2364 2745 4.443739 GGTGATGTTATCGGGTGGATTGTA 60.444 45.833 0.00 0.00 36.55 2.41
2517 2898 2.360475 GACCCTGCCAGGCAAGTC 60.360 66.667 22.53 22.53 38.41 3.01
2568 2949 0.678950 TCGTGGATGTCTTGAGCACA 59.321 50.000 0.00 0.00 0.00 4.57
2592 2973 2.493278 ACATGCACAAGTTCCTAATGGC 59.507 45.455 0.00 0.00 0.00 4.40
2721 3102 6.681368 GCAAGGCTTTTTGTAGATATCCAAGG 60.681 42.308 0.00 0.00 0.00 3.61
2750 3131 0.793617 AGAGGGAGAGGAAGGGACAA 59.206 55.000 0.00 0.00 0.00 3.18
2874 3255 7.848223 TGAAATCGATGATGAGTACATTGTT 57.152 32.000 0.00 0.00 36.82 2.83
2883 3264 2.640332 TGAGTACATTGTTACAGGGGCA 59.360 45.455 0.00 0.00 0.00 5.36
2987 3387 4.280436 CCACATGGTCCTAAAGTACACA 57.720 45.455 0.00 0.00 0.00 3.72
2989 3389 4.695455 CCACATGGTCCTAAAGTACACAAG 59.305 45.833 0.00 0.00 0.00 3.16
3000 3400 2.935481 GTACACAAGTACTCCCTCCG 57.065 55.000 0.00 0.00 45.66 4.63
3002 3402 1.713297 ACACAAGTACTCCCTCCGTT 58.287 50.000 0.00 0.00 0.00 4.44
3004 3404 1.893801 CACAAGTACTCCCTCCGTTCT 59.106 52.381 0.00 0.00 0.00 3.01
3005 3405 2.094649 CACAAGTACTCCCTCCGTTCTC 60.095 54.545 0.00 0.00 0.00 2.87
3006 3406 2.225066 ACAAGTACTCCCTCCGTTCTCT 60.225 50.000 0.00 0.00 0.00 3.10
3009 3409 4.523168 AGTACTCCCTCCGTTCTCTATT 57.477 45.455 0.00 0.00 0.00 1.73
3010 3410 5.643421 AGTACTCCCTCCGTTCTCTATTA 57.357 43.478 0.00 0.00 0.00 0.98
3015 3415 5.222171 ACTCCCTCCGTTCTCTATTATAGCT 60.222 44.000 0.00 0.00 0.00 3.32
3033 3468 4.632538 AGCTGTTTTAGTGTGTTGGTTC 57.367 40.909 0.00 0.00 0.00 3.62
3034 3469 4.013728 AGCTGTTTTAGTGTGTTGGTTCA 58.986 39.130 0.00 0.00 0.00 3.18
3041 3476 8.037758 TGTTTTAGTGTGTTGGTTCATTCATTT 58.962 29.630 0.00 0.00 0.00 2.32
3042 3477 8.539674 GTTTTAGTGTGTTGGTTCATTCATTTC 58.460 33.333 0.00 0.00 0.00 2.17
3047 3482 6.146021 GTGTGTTGGTTCATTCATTTCAATCC 59.854 38.462 0.00 0.00 0.00 3.01
3053 3488 6.376864 TGGTTCATTCATTTCAATCCGTATGT 59.623 34.615 0.00 0.00 0.00 2.29
3105 3540 8.871125 TCTTATAATTCAGAATGGAGGGAGTAC 58.129 37.037 0.00 0.00 36.16 2.73
3132 3567 2.571653 AGCTGCATACTAGTCCAAACCA 59.428 45.455 0.00 0.00 0.00 3.67
3151 3586 4.603131 ACCATCACCAATATGACTGCTTT 58.397 39.130 0.00 0.00 0.00 3.51
3153 3588 4.885907 CCATCACCAATATGACTGCTTTCT 59.114 41.667 0.00 0.00 0.00 2.52
3154 3589 5.220989 CCATCACCAATATGACTGCTTTCTG 60.221 44.000 0.00 0.00 0.00 3.02
3156 3591 6.048732 TCACCAATATGACTGCTTTCTGTA 57.951 37.500 0.00 0.00 0.00 2.74
3157 3592 6.653020 TCACCAATATGACTGCTTTCTGTAT 58.347 36.000 0.00 0.00 0.00 2.29
3160 3595 8.246180 CACCAATATGACTGCTTTCTGTATTTT 58.754 33.333 0.00 0.00 0.00 1.82
3161 3596 8.806146 ACCAATATGACTGCTTTCTGTATTTTT 58.194 29.630 0.00 0.00 0.00 1.94
3252 3690 3.274095 AGGACTTCAGATTTAGCTGCC 57.726 47.619 0.00 0.00 35.86 4.85
3255 3693 3.127721 GGACTTCAGATTTAGCTGCCAAC 59.872 47.826 0.00 0.00 35.86 3.77
3257 3695 3.503748 ACTTCAGATTTAGCTGCCAACAC 59.496 43.478 0.00 0.00 35.86 3.32
3260 3698 4.081406 TCAGATTTAGCTGCCAACACAAT 58.919 39.130 0.00 0.00 35.86 2.71
3265 3713 5.731599 TTTAGCTGCCAACACAATTTTTG 57.268 34.783 0.00 0.00 0.00 2.44
3358 3806 9.023967 CCTTCCGATTTATAGAATTTGCTTTTG 57.976 33.333 0.00 0.00 0.00 2.44
3401 3851 9.883142 ATCGAGTTATCTTCTTTCTCTTTCAAT 57.117 29.630 0.00 0.00 0.00 2.57
3575 4027 0.538746 TCGTTTCTTTTCCTGCCCCC 60.539 55.000 0.00 0.00 0.00 5.40
3640 4092 4.439253 AAAGTAGCAACAGAAACCCTCT 57.561 40.909 0.00 0.00 33.23 3.69
3709 4164 8.449423 TCCATTCTGTATATATTTAGCACCCT 57.551 34.615 0.00 0.00 0.00 4.34
3813 4276 0.591170 CCAGCCGTGGTTACAGTTTG 59.409 55.000 0.00 0.00 39.30 2.93
3815 4278 1.673920 CAGCCGTGGTTACAGTTTGTT 59.326 47.619 0.00 0.00 0.00 2.83
3824 4287 6.415573 CGTGGTTACAGTTTGTTAATTTGGTC 59.584 38.462 0.00 0.00 0.00 4.02
3831 4294 6.487331 ACAGTTTGTTAATTTGGTCGGTGATA 59.513 34.615 0.00 0.00 0.00 2.15
3850 4313 3.680786 CTGAGACGACACCGGGCA 61.681 66.667 6.32 0.00 40.78 5.36
3858 4321 1.217244 GACACCGGGCACGTTATCT 59.783 57.895 7.97 0.00 38.78 1.98
3859 4322 1.079405 ACACCGGGCACGTTATCTG 60.079 57.895 7.97 0.00 38.78 2.90
3860 4323 1.079405 CACCGGGCACGTTATCTGT 60.079 57.895 7.97 0.00 38.78 3.41
3861 4324 1.082117 CACCGGGCACGTTATCTGTC 61.082 60.000 7.97 0.00 38.78 3.51
3862 4325 1.216977 CCGGGCACGTTATCTGTCA 59.783 57.895 7.97 0.00 38.78 3.58
3863 4326 0.806102 CCGGGCACGTTATCTGTCAG 60.806 60.000 7.97 0.00 38.78 3.51
3874 4955 4.558697 CGTTATCTGTCAGTGTCAGGTGAA 60.559 45.833 15.91 6.51 34.15 3.18
3897 4978 0.110010 GCTTCCAGCTTCGAACAAGC 60.110 55.000 0.00 0.00 43.31 4.01
3903 4984 2.308039 GCTTCGAACAAGCGACCGT 61.308 57.895 0.00 0.00 40.42 4.83
3939 5020 4.360964 TGCAAGTGCGCAATGGCC 62.361 61.111 32.08 16.03 45.83 5.36
3982 5063 0.670239 CACGAAATTGCCCTTTGCCC 60.670 55.000 0.00 0.00 40.16 5.36
4106 5187 4.961511 GACAGGTGCGTGTCGGCA 62.962 66.667 8.88 0.00 37.69 5.69
4133 5218 4.638865 TGCTGATGATGGAATCTCACTTTG 59.361 41.667 0.00 0.00 45.81 2.77
4139 5225 5.434408 TGATGGAATCTCACTTTGGATCAG 58.566 41.667 0.00 0.00 45.81 2.90
4146 5232 1.699083 TCACTTTGGATCAGGTGCTGA 59.301 47.619 0.00 0.00 44.99 4.26
4276 5503 2.351726 GGATTGGAGTAATGCACACGAC 59.648 50.000 0.00 0.00 37.11 4.34
4277 5504 2.535012 TTGGAGTAATGCACACGACA 57.465 45.000 0.00 0.00 0.00 4.35
4344 5575 3.366679 GCAACATCACCTCCTTGACATTG 60.367 47.826 0.00 0.00 31.30 2.82
4348 5579 3.855255 TCACCTCCTTGACATTGACAA 57.145 42.857 1.79 1.79 0.00 3.18
4352 5586 5.598005 TCACCTCCTTGACATTGACAAAATT 59.402 36.000 3.32 0.00 0.00 1.82
4480 5717 7.468922 AAAGCAGTTTCAGAATGTTTAAAGC 57.531 32.000 0.00 0.00 37.40 3.51
4481 5718 6.147864 AGCAGTTTCAGAATGTTTAAAGCA 57.852 33.333 0.00 0.00 37.40 3.91
4488 5725 9.846248 GTTTCAGAATGTTTAAAGCATATGAGT 57.154 29.630 6.97 0.00 37.40 3.41
4517 5754 3.409026 TCAAGAAAGAGCAAGTCTCCC 57.591 47.619 0.00 0.00 42.90 4.30
4518 5755 2.072298 CAAGAAAGAGCAAGTCTCCCG 58.928 52.381 0.00 0.00 42.90 5.14
4519 5756 0.610687 AGAAAGAGCAAGTCTCCCGG 59.389 55.000 0.00 0.00 42.90 5.73
4520 5757 0.321996 GAAAGAGCAAGTCTCCCGGT 59.678 55.000 0.00 0.00 42.90 5.28
4521 5758 0.321996 AAAGAGCAAGTCTCCCGGTC 59.678 55.000 0.00 0.00 42.90 4.79
4522 5759 0.543174 AAGAGCAAGTCTCCCGGTCT 60.543 55.000 0.00 0.00 42.90 3.85
4523 5760 0.968393 AGAGCAAGTCTCCCGGTCTC 60.968 60.000 0.00 0.00 42.90 3.36
4524 5761 0.968393 GAGCAAGTCTCCCGGTCTCT 60.968 60.000 0.00 0.00 35.77 3.10
4525 5762 1.216710 GCAAGTCTCCCGGTCTCTG 59.783 63.158 0.00 0.00 0.00 3.35
4526 5763 1.216710 CAAGTCTCCCGGTCTCTGC 59.783 63.158 0.00 0.00 0.00 4.26
4527 5764 1.228894 AAGTCTCCCGGTCTCTGCA 60.229 57.895 0.00 0.00 0.00 4.41
4528 5765 1.536943 AAGTCTCCCGGTCTCTGCAC 61.537 60.000 0.00 0.00 0.00 4.57
4529 5766 2.680352 TCTCCCGGTCTCTGCACC 60.680 66.667 0.00 0.00 0.00 5.01
4530 5767 3.775654 CTCCCGGTCTCTGCACCC 61.776 72.222 0.00 0.00 31.99 4.61
4531 5768 4.316823 TCCCGGTCTCTGCACCCT 62.317 66.667 0.00 0.00 31.99 4.34
4532 5769 3.322466 CCCGGTCTCTGCACCCTT 61.322 66.667 0.00 0.00 31.99 3.95
4533 5770 2.266055 CCGGTCTCTGCACCCTTC 59.734 66.667 0.00 0.00 31.99 3.46
4534 5771 2.583441 CCGGTCTCTGCACCCTTCA 61.583 63.158 0.00 0.00 31.99 3.02
4535 5772 1.599047 CGGTCTCTGCACCCTTCAT 59.401 57.895 0.00 0.00 31.99 2.57
4536 5773 0.742281 CGGTCTCTGCACCCTTCATG 60.742 60.000 0.00 0.00 31.99 3.07
4537 5774 0.393537 GGTCTCTGCACCCTTCATGG 60.394 60.000 0.00 0.00 0.00 3.66
4556 5793 2.191641 GGCACCTCCATCTCAGCC 59.808 66.667 0.00 0.00 34.71 4.85
4557 5794 2.202987 GCACCTCCATCTCAGCCG 60.203 66.667 0.00 0.00 0.00 5.52
4558 5795 2.725312 GCACCTCCATCTCAGCCGA 61.725 63.158 0.00 0.00 0.00 5.54
4559 5796 2.037620 GCACCTCCATCTCAGCCGAT 62.038 60.000 0.00 0.00 0.00 4.18
4560 5797 0.033228 CACCTCCATCTCAGCCGATC 59.967 60.000 0.00 0.00 0.00 3.69
4561 5798 1.118356 ACCTCCATCTCAGCCGATCC 61.118 60.000 0.00 0.00 0.00 3.36
4562 5799 1.670590 CTCCATCTCAGCCGATCCC 59.329 63.158 0.00 0.00 0.00 3.85
4563 5800 0.831288 CTCCATCTCAGCCGATCCCT 60.831 60.000 0.00 0.00 0.00 4.20
4564 5801 0.829602 TCCATCTCAGCCGATCCCTC 60.830 60.000 0.00 0.00 0.00 4.30
4565 5802 1.288439 CATCTCAGCCGATCCCTCG 59.712 63.158 0.00 0.00 44.62 4.63
4574 5811 4.615815 GATCCCTCGGCGCATGCT 62.616 66.667 17.13 0.00 42.25 3.79
4575 5812 3.226429 GATCCCTCGGCGCATGCTA 62.226 63.158 17.13 0.00 42.25 3.49
4576 5813 3.521529 ATCCCTCGGCGCATGCTAC 62.522 63.158 17.13 7.62 42.25 3.58
4577 5814 4.529219 CCCTCGGCGCATGCTACA 62.529 66.667 17.13 0.00 42.25 2.74
4578 5815 3.264897 CCTCGGCGCATGCTACAC 61.265 66.667 17.13 2.15 42.25 2.90
4579 5816 3.620428 CTCGGCGCATGCTACACG 61.620 66.667 17.13 14.09 42.25 4.49
4580 5817 4.429212 TCGGCGCATGCTACACGT 62.429 61.111 17.13 0.00 42.25 4.49
4581 5818 2.581138 CGGCGCATGCTACACGTA 60.581 61.111 17.13 0.00 42.25 3.57
4582 5819 2.162120 CGGCGCATGCTACACGTAA 61.162 57.895 17.13 0.00 42.25 3.18
4583 5820 1.347221 GGCGCATGCTACACGTAAC 59.653 57.895 17.13 0.00 42.25 2.50
4584 5821 1.082117 GGCGCATGCTACACGTAACT 61.082 55.000 17.13 0.00 42.25 2.24
4585 5822 0.719465 GCGCATGCTACACGTAACTT 59.281 50.000 17.13 0.00 38.39 2.66
4586 5823 1.526986 GCGCATGCTACACGTAACTTG 60.527 52.381 17.13 0.00 38.39 3.16
4587 5824 1.724623 CGCATGCTACACGTAACTTGT 59.275 47.619 17.13 0.00 0.00 3.16
4588 5825 2.156891 CGCATGCTACACGTAACTTGTT 59.843 45.455 17.13 0.00 0.00 2.83
4589 5826 3.365520 CGCATGCTACACGTAACTTGTTA 59.634 43.478 17.13 0.00 0.00 2.41
4590 5827 4.490319 CGCATGCTACACGTAACTTGTTAG 60.490 45.833 17.13 0.00 0.00 2.34
4591 5828 4.387862 GCATGCTACACGTAACTTGTTAGT 59.612 41.667 11.37 0.00 35.68 2.24
4592 5829 5.444218 GCATGCTACACGTAACTTGTTAGTC 60.444 44.000 11.37 0.00 31.99 2.59
4593 5830 4.221342 TGCTACACGTAACTTGTTAGTCG 58.779 43.478 0.00 0.00 31.99 4.18
4594 5831 3.605486 GCTACACGTAACTTGTTAGTCGG 59.395 47.826 0.00 1.99 31.99 4.79
4595 5832 2.397549 ACACGTAACTTGTTAGTCGGC 58.602 47.619 0.00 0.00 31.99 5.54
4596 5833 2.035066 ACACGTAACTTGTTAGTCGGCT 59.965 45.455 0.00 0.00 31.99 5.52
4597 5834 2.407361 CACGTAACTTGTTAGTCGGCTG 59.593 50.000 0.00 0.00 31.99 4.85
4598 5835 2.294233 ACGTAACTTGTTAGTCGGCTGA 59.706 45.455 0.00 0.00 31.99 4.26
4599 5836 2.915463 CGTAACTTGTTAGTCGGCTGAG 59.085 50.000 0.00 0.00 31.99 3.35
4600 5837 2.457366 AACTTGTTAGTCGGCTGAGG 57.543 50.000 0.00 0.00 31.99 3.86
4601 5838 0.037232 ACTTGTTAGTCGGCTGAGGC 60.037 55.000 0.00 0.00 37.82 4.70
4610 5847 4.760047 GGCTGAGGCGCGGAGAAA 62.760 66.667 8.83 0.00 39.81 2.52
4611 5848 2.512515 GCTGAGGCGCGGAGAAAT 60.513 61.111 8.83 0.00 0.00 2.17
4612 5849 2.109126 GCTGAGGCGCGGAGAAATT 61.109 57.895 8.83 0.00 0.00 1.82
4613 5850 1.648467 GCTGAGGCGCGGAGAAATTT 61.648 55.000 8.83 0.00 0.00 1.82
4614 5851 1.651987 CTGAGGCGCGGAGAAATTTA 58.348 50.000 8.83 0.00 0.00 1.40
4615 5852 1.594862 CTGAGGCGCGGAGAAATTTAG 59.405 52.381 8.83 0.00 0.00 1.85
4616 5853 0.305009 GAGGCGCGGAGAAATTTAGC 59.695 55.000 8.83 0.00 0.00 3.09
4617 5854 1.095807 AGGCGCGGAGAAATTTAGCC 61.096 55.000 8.83 0.00 43.07 3.93
4618 5855 1.011131 GCGCGGAGAAATTTAGCCG 60.011 57.895 20.84 20.84 46.14 5.52
4621 5858 2.380081 CGGAGAAATTTAGCCGCGT 58.620 52.632 15.55 0.00 37.08 6.01
4622 5859 0.300789 CGGAGAAATTTAGCCGCGTC 59.699 55.000 15.55 0.00 37.08 5.19
4623 5860 0.656259 GGAGAAATTTAGCCGCGTCC 59.344 55.000 4.92 0.00 0.00 4.79
4624 5861 0.300789 GAGAAATTTAGCCGCGTCCG 59.699 55.000 4.92 0.00 0.00 4.79
4625 5862 0.108520 AGAAATTTAGCCGCGTCCGA 60.109 50.000 4.92 0.00 36.29 4.55
4626 5863 0.935196 GAAATTTAGCCGCGTCCGAT 59.065 50.000 4.92 0.00 36.29 4.18
4627 5864 0.935196 AAATTTAGCCGCGTCCGATC 59.065 50.000 4.92 0.00 36.29 3.69
4628 5865 0.104304 AATTTAGCCGCGTCCGATCT 59.896 50.000 4.92 0.00 36.29 2.75
4629 5866 0.597637 ATTTAGCCGCGTCCGATCTG 60.598 55.000 4.92 0.00 36.29 2.90
4630 5867 3.768185 TTAGCCGCGTCCGATCTGC 62.768 63.158 4.92 0.00 36.29 4.26
4633 5870 4.498520 CCGCGTCCGATCTGCTGT 62.499 66.667 4.92 0.00 36.29 4.40
4634 5871 2.951745 CGCGTCCGATCTGCTGTC 60.952 66.667 0.00 0.00 36.29 3.51
4635 5872 2.951745 GCGTCCGATCTGCTGTCG 60.952 66.667 8.03 8.03 38.75 4.35
4640 5877 4.578913 CGATCTGCTGTCGGTTGT 57.421 55.556 7.38 0.00 35.55 3.32
4641 5878 2.073307 CGATCTGCTGTCGGTTGTG 58.927 57.895 7.38 0.00 35.55 3.33
4642 5879 1.790387 GATCTGCTGTCGGTTGTGC 59.210 57.895 0.00 0.00 0.00 4.57
4643 5880 1.639298 GATCTGCTGTCGGTTGTGCC 61.639 60.000 0.00 0.00 0.00 5.01
4644 5881 3.357079 CTGCTGTCGGTTGTGCCC 61.357 66.667 0.00 0.00 0.00 5.36
4645 5882 4.182433 TGCTGTCGGTTGTGCCCA 62.182 61.111 0.00 0.00 0.00 5.36
4646 5883 2.904866 GCTGTCGGTTGTGCCCAA 60.905 61.111 0.00 0.00 0.00 4.12
4654 5891 3.450028 GTTGTGCCCAACTTTGCAA 57.550 47.368 4.66 0.00 46.07 4.08
4655 5892 1.006086 GTTGTGCCCAACTTTGCAAC 58.994 50.000 4.66 0.00 46.07 4.17
4656 5893 0.610174 TTGTGCCCAACTTTGCAACA 59.390 45.000 0.00 0.00 39.57 3.33
4657 5894 0.108424 TGTGCCCAACTTTGCAACAC 60.108 50.000 0.00 2.62 39.57 3.32
4658 5895 1.140589 TGCCCAACTTTGCAACACG 59.859 52.632 0.00 0.00 33.87 4.49
4659 5896 1.315981 TGCCCAACTTTGCAACACGA 61.316 50.000 0.00 0.00 33.87 4.35
4660 5897 0.594796 GCCCAACTTTGCAACACGAG 60.595 55.000 0.00 0.00 0.00 4.18
4661 5898 0.738389 CCCAACTTTGCAACACGAGT 59.262 50.000 0.00 0.00 0.00 4.18
4662 5899 1.268539 CCCAACTTTGCAACACGAGTC 60.269 52.381 0.00 0.00 0.00 3.36
4663 5900 1.400142 CCAACTTTGCAACACGAGTCA 59.600 47.619 0.00 0.00 0.00 3.41
4664 5901 2.033299 CCAACTTTGCAACACGAGTCAT 59.967 45.455 0.00 0.00 0.00 3.06
4665 5902 3.038017 CAACTTTGCAACACGAGTCATG 58.962 45.455 0.00 0.00 0.00 3.07
4666 5903 2.288666 ACTTTGCAACACGAGTCATGT 58.711 42.857 0.00 0.00 0.00 3.21
4667 5904 2.682856 ACTTTGCAACACGAGTCATGTT 59.317 40.909 0.00 0.00 40.95 2.71
4671 5908 2.234613 AACACGAGTCATGTTGCCG 58.765 52.632 3.34 0.00 38.84 5.69
4672 5909 0.531974 AACACGAGTCATGTTGCCGT 60.532 50.000 3.34 0.00 38.84 5.68
4673 5910 0.315886 ACACGAGTCATGTTGCCGTA 59.684 50.000 0.00 0.00 31.83 4.02
4674 5911 1.269883 ACACGAGTCATGTTGCCGTAA 60.270 47.619 0.00 0.00 31.83 3.18
4675 5912 1.795872 CACGAGTCATGTTGCCGTAAA 59.204 47.619 0.00 0.00 31.83 2.01
4676 5913 1.796459 ACGAGTCATGTTGCCGTAAAC 59.204 47.619 0.00 0.00 0.00 2.01
4677 5914 1.795872 CGAGTCATGTTGCCGTAAACA 59.204 47.619 3.00 3.00 43.82 2.83
4679 5916 3.120338 CGAGTCATGTTGCCGTAAACATT 60.120 43.478 9.53 0.00 46.19 2.71
4680 5917 4.403453 GAGTCATGTTGCCGTAAACATTC 58.597 43.478 9.53 7.05 46.19 2.67
4681 5918 4.072131 AGTCATGTTGCCGTAAACATTCT 58.928 39.130 9.53 8.68 46.19 2.40
4682 5919 4.518970 AGTCATGTTGCCGTAAACATTCTT 59.481 37.500 9.53 0.00 46.19 2.52
4683 5920 4.851558 GTCATGTTGCCGTAAACATTCTTC 59.148 41.667 9.53 0.34 46.19 2.87
4684 5921 4.517075 TCATGTTGCCGTAAACATTCTTCA 59.483 37.500 9.53 0.00 46.19 3.02
4685 5922 5.182950 TCATGTTGCCGTAAACATTCTTCAT 59.817 36.000 9.53 0.00 46.19 2.57
4686 5923 4.793071 TGTTGCCGTAAACATTCTTCATG 58.207 39.130 0.00 0.00 35.16 3.07
4687 5924 5.048083 ATGTTGCCGTAAACATTCTTCATGT 60.048 36.000 7.03 0.00 46.19 3.21
4707 5944 4.910195 TGTTTCAGGAACATAGCAGATGT 58.090 39.130 0.00 0.00 43.13 3.06
4708 5945 5.316167 TGTTTCAGGAACATAGCAGATGTT 58.684 37.500 14.78 14.78 43.13 2.71
4709 5946 5.181811 TGTTTCAGGAACATAGCAGATGTTG 59.818 40.000 18.55 8.18 43.13 3.33
4710 5947 5.901300 GTTTCAGGAACATAGCAGATGTTGC 60.901 44.000 21.04 21.04 46.31 4.17
4711 5948 8.759267 GTTTCAGGAACATAGCAGATGTTGCC 62.759 46.154 23.37 19.64 46.88 4.52
4718 5955 2.562912 CAGATGTTGCCACGCACC 59.437 61.111 0.00 0.00 38.71 5.01
4719 5956 3.049674 AGATGTTGCCACGCACCG 61.050 61.111 0.00 0.00 38.71 4.94
4720 5957 4.101790 GATGTTGCCACGCACCGG 62.102 66.667 0.00 0.00 38.71 5.28
4727 5964 3.361158 CCACGCACCGGCATTCAA 61.361 61.111 0.00 0.00 41.24 2.69
4728 5965 2.126888 CACGCACCGGCATTCAAC 60.127 61.111 0.00 0.00 41.24 3.18
4729 5966 2.593148 ACGCACCGGCATTCAACA 60.593 55.556 0.00 0.00 41.24 3.33
4730 5967 1.971167 ACGCACCGGCATTCAACAT 60.971 52.632 0.00 0.00 41.24 2.71
4731 5968 1.514657 CGCACCGGCATTCAACATG 60.515 57.895 0.00 0.00 41.24 3.21
4732 5969 1.586028 GCACCGGCATTCAACATGT 59.414 52.632 0.00 0.00 40.72 3.21
4733 5970 0.456653 GCACCGGCATTCAACATGTC 60.457 55.000 0.00 0.00 40.72 3.06
4734 5971 0.171007 CACCGGCATTCAACATGTCC 59.829 55.000 0.00 0.00 0.00 4.02
4735 5972 0.038166 ACCGGCATTCAACATGTCCT 59.962 50.000 0.00 0.00 0.00 3.85
4736 5973 1.176527 CCGGCATTCAACATGTCCTT 58.823 50.000 0.00 0.00 0.00 3.36
4737 5974 1.545582 CCGGCATTCAACATGTCCTTT 59.454 47.619 0.00 0.00 0.00 3.11
4738 5975 2.598589 CGGCATTCAACATGTCCTTTG 58.401 47.619 0.00 0.00 0.00 2.77
4739 5976 2.228582 CGGCATTCAACATGTCCTTTGA 59.771 45.455 0.00 0.00 0.00 2.69
4740 5977 3.305267 CGGCATTCAACATGTCCTTTGAA 60.305 43.478 11.94 11.94 43.89 2.69
4741 5978 4.630111 GGCATTCAACATGTCCTTTGAAA 58.370 39.130 13.21 0.45 43.20 2.69
4742 5979 4.448732 GGCATTCAACATGTCCTTTGAAAC 59.551 41.667 13.21 9.27 43.20 2.78
4743 5980 5.291971 GCATTCAACATGTCCTTTGAAACT 58.708 37.500 13.21 0.00 43.20 2.66
4744 5981 5.403466 GCATTCAACATGTCCTTTGAAACTC 59.597 40.000 13.21 4.19 43.20 3.01
4745 5982 6.506147 CATTCAACATGTCCTTTGAAACTCA 58.494 36.000 13.21 0.00 43.20 3.41
4746 5983 5.499139 TCAACATGTCCTTTGAAACTCAC 57.501 39.130 0.00 0.00 0.00 3.51
4747 5984 4.338118 TCAACATGTCCTTTGAAACTCACC 59.662 41.667 0.00 0.00 0.00 4.02
4748 5985 3.897239 ACATGTCCTTTGAAACTCACCA 58.103 40.909 0.00 0.00 0.00 4.17
4749 5986 4.277476 ACATGTCCTTTGAAACTCACCAA 58.723 39.130 0.00 0.00 0.00 3.67
4750 5987 4.339247 ACATGTCCTTTGAAACTCACCAAG 59.661 41.667 0.00 0.00 0.00 3.61
4751 5988 3.963129 TGTCCTTTGAAACTCACCAAGT 58.037 40.909 0.00 0.00 41.10 3.16
4759 5996 1.473258 AACTCACCAAGTTTGCAGCA 58.527 45.000 0.00 0.00 46.26 4.41
4760 5997 1.473258 ACTCACCAAGTTTGCAGCAA 58.527 45.000 2.83 2.83 33.03 3.91
4761 5998 1.406539 ACTCACCAAGTTTGCAGCAAG 59.593 47.619 8.12 0.00 33.03 4.01
4762 5999 0.102844 TCACCAAGTTTGCAGCAAGC 59.897 50.000 13.82 13.82 45.96 4.01
4776 6013 2.582272 CAAGCATGCCCCTTTAGCA 58.418 52.632 15.66 0.00 45.94 3.49
4781 6018 2.440065 TGCCCCTTTAGCATGCCG 60.440 61.111 15.66 0.13 34.69 5.69
4782 6019 2.440247 GCCCCTTTAGCATGCCGT 60.440 61.111 15.66 0.00 0.00 5.68
4783 6020 2.052104 GCCCCTTTAGCATGCCGTT 61.052 57.895 15.66 0.00 0.00 4.44
4784 6021 2.004808 GCCCCTTTAGCATGCCGTTC 62.005 60.000 15.66 0.00 0.00 3.95
4785 6022 1.714899 CCCCTTTAGCATGCCGTTCG 61.715 60.000 15.66 0.00 0.00 3.95
4786 6023 0.742990 CCCTTTAGCATGCCGTTCGA 60.743 55.000 15.66 0.00 0.00 3.71
4787 6024 1.083489 CCTTTAGCATGCCGTTCGAA 58.917 50.000 15.66 0.00 0.00 3.71
4788 6025 1.466950 CCTTTAGCATGCCGTTCGAAA 59.533 47.619 15.66 4.87 0.00 3.46
4789 6026 2.505866 CTTTAGCATGCCGTTCGAAAC 58.494 47.619 15.66 0.00 0.00 2.78
4790 6027 1.803334 TTAGCATGCCGTTCGAAACT 58.197 45.000 15.66 0.00 0.00 2.66
4791 6028 1.355971 TAGCATGCCGTTCGAAACTC 58.644 50.000 15.66 0.00 0.00 3.01
4792 6029 0.602638 AGCATGCCGTTCGAAACTCA 60.603 50.000 15.66 0.00 0.00 3.41
4793 6030 0.452784 GCATGCCGTTCGAAACTCAC 60.453 55.000 6.36 0.00 0.00 3.51
4794 6031 1.148310 CATGCCGTTCGAAACTCACT 58.852 50.000 0.00 0.00 0.00 3.41
4795 6032 2.333926 CATGCCGTTCGAAACTCACTA 58.666 47.619 0.00 0.00 0.00 2.74
4796 6033 2.512485 TGCCGTTCGAAACTCACTAA 57.488 45.000 0.00 0.00 0.00 2.24
4797 6034 2.823984 TGCCGTTCGAAACTCACTAAA 58.176 42.857 0.00 0.00 0.00 1.85
4798 6035 2.798283 TGCCGTTCGAAACTCACTAAAG 59.202 45.455 0.00 0.00 0.00 1.85
4799 6036 2.798847 GCCGTTCGAAACTCACTAAAGT 59.201 45.455 0.00 0.00 0.00 2.66
4800 6037 3.246936 GCCGTTCGAAACTCACTAAAGTT 59.753 43.478 0.00 0.00 41.20 2.66
4801 6038 4.758561 CCGTTCGAAACTCACTAAAGTTG 58.241 43.478 0.00 0.00 39.40 3.16
4802 6039 4.201576 CGTTCGAAACTCACTAAAGTTGC 58.798 43.478 0.00 0.00 39.40 4.17
4803 6040 4.260051 CGTTCGAAACTCACTAAAGTTGCA 60.260 41.667 0.00 0.00 39.40 4.08
4804 6041 5.198274 GTTCGAAACTCACTAAAGTTGCAG 58.802 41.667 0.00 0.00 39.40 4.41
4805 6042 3.247648 TCGAAACTCACTAAAGTTGCAGC 59.752 43.478 0.00 0.00 39.40 5.25
4806 6043 3.002246 CGAAACTCACTAAAGTTGCAGCA 59.998 43.478 2.55 0.00 39.40 4.41
4807 6044 4.495679 CGAAACTCACTAAAGTTGCAGCAA 60.496 41.667 2.83 2.83 39.40 3.91
4808 6045 3.971032 ACTCACTAAAGTTGCAGCAAC 57.029 42.857 28.02 28.02 43.83 4.17
4809 6046 2.618709 ACTCACTAAAGTTGCAGCAACC 59.381 45.455 30.73 15.48 44.49 3.77
4810 6047 2.618241 CTCACTAAAGTTGCAGCAACCA 59.382 45.455 30.73 17.25 44.49 3.67
4811 6048 2.357637 TCACTAAAGTTGCAGCAACCAC 59.642 45.455 30.73 11.03 44.49 4.16
4812 6049 1.333619 ACTAAAGTTGCAGCAACCACG 59.666 47.619 30.73 19.80 44.49 4.94
4813 6050 0.030101 TAAAGTTGCAGCAACCACGC 59.970 50.000 30.73 9.47 44.49 5.34
4814 6051 2.627510 AAAGTTGCAGCAACCACGCC 62.628 55.000 30.73 8.74 44.49 5.68
4815 6052 4.645921 GTTGCAGCAACCACGCCC 62.646 66.667 25.53 0.28 38.30 6.13
4835 6072 4.487412 GCCTTGCAGCACGGCATC 62.487 66.667 32.62 8.04 46.18 3.91
4836 6073 2.749044 CCTTGCAGCACGGCATCT 60.749 61.111 4.72 0.00 44.48 2.90
4837 6074 2.338015 CCTTGCAGCACGGCATCTT 61.338 57.895 4.72 0.00 44.48 2.40
4838 6075 1.154093 CTTGCAGCACGGCATCTTG 60.154 57.895 0.00 0.00 44.48 3.02
4839 6076 2.537792 CTTGCAGCACGGCATCTTGG 62.538 60.000 0.00 0.00 44.48 3.61
4840 6077 3.058160 GCAGCACGGCATCTTGGT 61.058 61.111 0.00 0.00 0.00 3.67
4841 6078 2.872557 CAGCACGGCATCTTGGTG 59.127 61.111 0.00 0.00 35.05 4.17
4848 6085 3.181367 GCATCTTGGTGCCTGTCG 58.819 61.111 0.00 0.00 39.18 4.35
4849 6086 2.401766 GCATCTTGGTGCCTGTCGG 61.402 63.158 0.00 0.00 39.18 4.79
4850 6087 1.296392 CATCTTGGTGCCTGTCGGA 59.704 57.895 0.00 0.00 0.00 4.55
4851 6088 0.742281 CATCTTGGTGCCTGTCGGAG 60.742 60.000 0.00 0.00 0.00 4.63
4852 6089 1.194781 ATCTTGGTGCCTGTCGGAGT 61.195 55.000 0.00 0.00 0.00 3.85
4853 6090 1.071471 CTTGGTGCCTGTCGGAGTT 59.929 57.895 0.00 0.00 0.00 3.01
4854 6091 1.227823 TTGGTGCCTGTCGGAGTTG 60.228 57.895 0.00 0.00 0.00 3.16
4855 6092 3.050275 GGTGCCTGTCGGAGTTGC 61.050 66.667 0.00 0.00 0.00 4.17
4856 6093 3.414700 GTGCCTGTCGGAGTTGCG 61.415 66.667 0.00 0.00 0.00 4.85
4857 6094 3.611674 TGCCTGTCGGAGTTGCGA 61.612 61.111 0.00 0.00 0.00 5.10
4858 6095 2.125512 GCCTGTCGGAGTTGCGAT 60.126 61.111 0.00 0.00 0.00 4.58
4859 6096 2.456119 GCCTGTCGGAGTTGCGATG 61.456 63.158 0.00 0.00 0.00 3.84
4860 6097 2.456119 CCTGTCGGAGTTGCGATGC 61.456 63.158 0.00 0.00 0.00 3.91
4861 6098 2.434185 TGTCGGAGTTGCGATGCC 60.434 61.111 0.00 0.00 0.00 4.40
4862 6099 3.554692 GTCGGAGTTGCGATGCCG 61.555 66.667 10.32 10.32 44.83 5.69
4863 6100 4.812476 TCGGAGTTGCGATGCCGG 62.812 66.667 15.01 0.00 43.71 6.13
4866 6103 2.202878 GAGTTGCGATGCCGGCTA 60.203 61.111 29.70 14.84 36.06 3.93
4867 6104 2.511600 AGTTGCGATGCCGGCTAC 60.512 61.111 29.70 19.72 36.58 3.58
4868 6105 2.817834 GTTGCGATGCCGGCTACA 60.818 61.111 29.70 17.09 36.40 2.74
4869 6106 2.817834 TTGCGATGCCGGCTACAC 60.818 61.111 29.70 15.29 36.06 2.90
4870 6107 3.597675 TTGCGATGCCGGCTACACA 62.598 57.895 29.70 17.85 36.06 3.72
4871 6108 3.564027 GCGATGCCGGCTACACAC 61.564 66.667 29.70 8.53 36.06 3.82
4872 6109 2.184322 CGATGCCGGCTACACACT 59.816 61.111 29.70 2.95 0.00 3.55
4873 6110 1.447838 CGATGCCGGCTACACACTT 60.448 57.895 29.70 1.60 0.00 3.16
4874 6111 1.421410 CGATGCCGGCTACACACTTC 61.421 60.000 29.70 10.05 0.00 3.01
4875 6112 1.078426 ATGCCGGCTACACACTTCC 60.078 57.895 29.70 0.00 0.00 3.46
4876 6113 1.553690 ATGCCGGCTACACACTTCCT 61.554 55.000 29.70 0.00 0.00 3.36
4877 6114 1.003718 GCCGGCTACACACTTCCTT 60.004 57.895 22.15 0.00 0.00 3.36
4878 6115 1.298859 GCCGGCTACACACTTCCTTG 61.299 60.000 22.15 0.00 0.00 3.61
4879 6116 1.298859 CCGGCTACACACTTCCTTGC 61.299 60.000 0.00 0.00 0.00 4.01
4880 6117 0.602638 CGGCTACACACTTCCTTGCA 60.603 55.000 0.00 0.00 0.00 4.08
4881 6118 1.160137 GGCTACACACTTCCTTGCAG 58.840 55.000 0.00 0.00 0.00 4.41
4882 6119 0.519077 GCTACACACTTCCTTGCAGC 59.481 55.000 0.00 0.00 0.00 5.25
4883 6120 1.882912 CTACACACTTCCTTGCAGCA 58.117 50.000 0.00 0.00 0.00 4.41
4884 6121 1.532868 CTACACACTTCCTTGCAGCAC 59.467 52.381 0.00 0.00 0.00 4.40
4885 6122 1.280746 CACACTTCCTTGCAGCACG 59.719 57.895 0.00 0.00 0.00 5.34
4886 6123 2.253452 CACTTCCTTGCAGCACGC 59.747 61.111 0.00 0.00 42.89 5.34
4887 6124 2.111878 ACTTCCTTGCAGCACGCT 59.888 55.556 0.00 0.00 43.06 5.07
4888 6125 2.256591 ACTTCCTTGCAGCACGCTG 61.257 57.895 14.73 14.73 46.15 5.18
4889 6126 2.203195 TTCCTTGCAGCACGCTGT 60.203 55.556 19.56 0.00 45.24 4.40
4890 6127 1.789078 CTTCCTTGCAGCACGCTGTT 61.789 55.000 19.56 0.00 45.24 3.16
4891 6128 1.785041 TTCCTTGCAGCACGCTGTTC 61.785 55.000 19.56 5.41 45.24 3.18
4892 6129 2.256591 CCTTGCAGCACGCTGTTCT 61.257 57.895 19.56 0.00 45.24 3.01
4893 6130 1.082300 CTTGCAGCACGCTGTTCTG 60.082 57.895 19.56 0.00 45.24 3.02
4894 6131 2.453773 CTTGCAGCACGCTGTTCTGG 62.454 60.000 19.56 3.68 45.24 3.86
4895 6132 2.974698 GCAGCACGCTGTTCTGGT 60.975 61.111 19.56 0.00 45.24 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 2.352342 ACAACGGACGGTGTAAACAAAG 59.648 45.455 14.37 0.00 45.20 2.77
25 26 2.022129 GCAGTGAGACAACGGACGG 61.022 63.158 0.00 0.00 0.00 4.79
26 27 2.022129 GGCAGTGAGACAACGGACG 61.022 63.158 0.00 0.00 0.00 4.79
44 45 3.537874 GGGATGGGACGAGGACGG 61.538 72.222 0.00 0.00 44.46 4.79
51 52 3.480133 GGTGGAGGGGATGGGACG 61.480 72.222 0.00 0.00 0.00 4.79
85 86 0.788391 GAACACGATGTCGGAACCAC 59.212 55.000 7.38 0.00 44.95 4.16
152 154 2.498077 CTCCTCGTCATCCAGAGCA 58.502 57.895 0.00 0.00 33.39 4.26
153 155 1.067250 GCTCCTCGTCATCCAGAGC 59.933 63.158 0.00 0.00 42.74 4.09
190 192 1.197721 GTCCATCTGCAACCAAACGAG 59.802 52.381 0.00 0.00 0.00 4.18
212 214 0.678048 GGAGCTTGAATTGTCGCCCT 60.678 55.000 0.00 0.00 0.00 5.19
222 224 2.347490 GAGGCCGTGGAGCTTGAA 59.653 61.111 0.00 0.00 0.00 2.69
231 233 3.470888 CCACTAGGGGAGGCCGTG 61.471 72.222 4.45 0.00 0.00 4.94
268 270 2.625639 CTATCTAACTGGGGAGGGCAT 58.374 52.381 0.00 0.00 0.00 4.40
269 271 2.040144 GCTATCTAACTGGGGAGGGCA 61.040 57.143 0.00 0.00 0.00 5.36
303 305 0.456628 GGCCTAGAGGTGTCGAGAAC 59.543 60.000 0.00 0.00 37.57 3.01
305 307 0.331954 AAGGCCTAGAGGTGTCGAGA 59.668 55.000 5.16 0.00 37.57 4.04
377 381 3.086600 GGCTGGAGGCTGGTAGCT 61.087 66.667 12.23 0.00 41.99 3.32
408 412 1.214673 AGTGGCTCCAATCTGCATGAT 59.785 47.619 0.00 0.00 36.89 2.45
411 415 2.097825 GAAAGTGGCTCCAATCTGCAT 58.902 47.619 0.00 0.00 0.00 3.96
434 444 1.069978 TCTTGTTGTCATCAGCGGTGA 59.930 47.619 21.02 21.02 37.02 4.02
444 454 0.976641 AGCGGAGGATCTTGTTGTCA 59.023 50.000 0.00 0.00 33.73 3.58
448 458 2.766263 TGACATAGCGGAGGATCTTGTT 59.234 45.455 0.00 0.00 33.73 2.83
504 514 0.108709 TGCCATCGCATTTTTGAGGC 60.109 50.000 0.00 0.00 41.12 4.70
595 616 5.960113 TGAGCAAACACAGTAAAACATGTT 58.040 33.333 4.92 4.92 36.86 2.71
606 627 5.526115 ACTGAAATGAATGAGCAAACACAG 58.474 37.500 0.00 0.00 0.00 3.66
615 636 7.515215 CGTTATGTACGGACTGAAATGAATGAG 60.515 40.741 0.00 0.00 46.42 2.90
660 681 9.832445 GTCCCTCAGTTCACAAATATAAAGATA 57.168 33.333 0.00 0.00 0.00 1.98
663 684 9.667107 TTAGTCCCTCAGTTCACAAATATAAAG 57.333 33.333 0.00 0.00 0.00 1.85
873 1185 3.791586 GCAGCCACCCTCTCCCTC 61.792 72.222 0.00 0.00 0.00 4.30
896 1208 2.731691 CTTCCGAGGTGGTGGTGGTG 62.732 65.000 0.00 0.00 39.52 4.17
897 1209 2.446994 TTCCGAGGTGGTGGTGGT 60.447 61.111 0.00 0.00 39.52 4.16
898 1210 2.347490 CTTCCGAGGTGGTGGTGG 59.653 66.667 0.00 0.00 39.52 4.61
937 1252 3.342370 CTCCTACAGCTCGCACGCA 62.342 63.158 0.00 0.00 0.00 5.24
938 1253 2.580867 CTCCTACAGCTCGCACGC 60.581 66.667 0.00 0.00 0.00 5.34
939 1254 2.103143 CCTCCTACAGCTCGCACG 59.897 66.667 0.00 0.00 0.00 5.34
940 1255 1.035932 TACCCTCCTACAGCTCGCAC 61.036 60.000 0.00 0.00 0.00 5.34
941 1256 1.035932 GTACCCTCCTACAGCTCGCA 61.036 60.000 0.00 0.00 0.00 5.10
942 1257 1.734748 GTACCCTCCTACAGCTCGC 59.265 63.158 0.00 0.00 0.00 5.03
943 1258 1.445716 CCGTACCCTCCTACAGCTCG 61.446 65.000 0.00 0.00 0.00 5.03
944 1259 0.395448 ACCGTACCCTCCTACAGCTC 60.395 60.000 0.00 0.00 0.00 4.09
994 1317 1.619975 AGGGGAGACGAGAGGGAGA 60.620 63.158 0.00 0.00 0.00 3.71
995 1318 1.152839 GAGGGGAGACGAGAGGGAG 60.153 68.421 0.00 0.00 0.00 4.30
996 1319 2.691779 GGAGGGGAGACGAGAGGGA 61.692 68.421 0.00 0.00 0.00 4.20
997 1320 2.123640 GGAGGGGAGACGAGAGGG 60.124 72.222 0.00 0.00 0.00 4.30
998 1321 2.123640 GGGAGGGGAGACGAGAGG 60.124 72.222 0.00 0.00 0.00 3.69
999 1322 1.755008 GTGGGAGGGGAGACGAGAG 60.755 68.421 0.00 0.00 0.00 3.20
1004 1327 3.009714 GGTGGTGGGAGGGGAGAC 61.010 72.222 0.00 0.00 0.00 3.36
1005 1328 4.715130 CGGTGGTGGGAGGGGAGA 62.715 72.222 0.00 0.00 0.00 3.71
1075 1400 2.514516 AAAAATGGGCGGAGGGAGGG 62.515 60.000 0.00 0.00 0.00 4.30
1096 1421 2.799540 GACGTCGAAATCCAGCGGC 61.800 63.158 0.00 0.00 0.00 6.53
1152 1477 4.144703 GGGAGAAGCGGGTCGACC 62.145 72.222 27.04 27.04 0.00 4.79
1173 1498 1.824760 CCGAAACCCAACAACCCGT 60.825 57.895 0.00 0.00 0.00 5.28
1244 1576 1.184970 AACAGCCCCAAAATCCACCG 61.185 55.000 0.00 0.00 0.00 4.94
1279 1611 4.362476 CCCACCAAAAGCAGCGGC 62.362 66.667 0.00 0.00 41.61 6.53
1280 1612 4.362476 GCCCACCAAAAGCAGCGG 62.362 66.667 0.00 0.00 0.00 5.52
1282 1614 2.341176 CAGCCCACCAAAAGCAGC 59.659 61.111 0.00 0.00 0.00 5.25
1283 1615 1.530013 CTCCAGCCCACCAAAAGCAG 61.530 60.000 0.00 0.00 0.00 4.24
1284 1616 1.531365 CTCCAGCCCACCAAAAGCA 60.531 57.895 0.00 0.00 0.00 3.91
1286 1618 0.178992 TCACTCCAGCCCACCAAAAG 60.179 55.000 0.00 0.00 0.00 2.27
1309 1641 1.041437 CCTAAACCCCGGAGCTCTAG 58.959 60.000 14.64 8.19 0.00 2.43
1318 1650 2.647680 TATTCGCGGCCTAAACCCCG 62.648 60.000 6.13 0.00 46.94 5.73
1344 1683 3.333723 CGTCAAATCAAATCACGCTACG 58.666 45.455 0.00 0.00 0.00 3.51
1347 1686 1.468520 CCCGTCAAATCAAATCACGCT 59.531 47.619 0.00 0.00 0.00 5.07
1374 1713 2.653702 GCGGAGGAGATCGGGATG 59.346 66.667 0.00 0.00 0.00 3.51
1375 1714 2.986413 CGCGGAGGAGATCGGGAT 60.986 66.667 0.00 0.00 40.92 3.85
1412 1762 0.820891 CCCTTCAATCCGCATCTGGG 60.821 60.000 0.00 0.00 0.00 4.45
1486 1843 7.607607 GGAAATCAGTAAAGCAAAATCCCAAAT 59.392 33.333 0.00 0.00 0.00 2.32
1519 1876 7.591006 TCATAACACGAGAAATCCTAACAAC 57.409 36.000 0.00 0.00 0.00 3.32
1520 1877 8.786826 AATCATAACACGAGAAATCCTAACAA 57.213 30.769 0.00 0.00 0.00 2.83
1535 1892 8.137437 CCATCCTACCAATGAAAATCATAACAC 58.863 37.037 0.00 0.00 35.76 3.32
1541 1898 5.834742 CCATCCATCCTACCAATGAAAATCA 59.165 40.000 0.00 0.00 0.00 2.57
1543 1900 4.590222 GCCATCCATCCTACCAATGAAAAT 59.410 41.667 0.00 0.00 0.00 1.82
1544 1901 3.960102 GCCATCCATCCTACCAATGAAAA 59.040 43.478 0.00 0.00 0.00 2.29
1548 1905 2.511659 CAGCCATCCATCCTACCAATG 58.488 52.381 0.00 0.00 0.00 2.82
1555 1918 1.620524 CCAAAACCAGCCATCCATCCT 60.621 52.381 0.00 0.00 0.00 3.24
1560 1923 0.890683 CTGACCAAAACCAGCCATCC 59.109 55.000 0.00 0.00 0.00 3.51
1570 1933 3.523157 TCATCATAGCCCTCTGACCAAAA 59.477 43.478 0.00 0.00 0.00 2.44
1582 1945 2.503895 CCCCCAAGATCATCATAGCC 57.496 55.000 0.00 0.00 0.00 3.93
1611 1977 0.600782 TGGTTTTGCTACCGTCGTCC 60.601 55.000 0.00 0.00 41.28 4.79
1617 1983 1.210155 GCTGCTGGTTTTGCTACCG 59.790 57.895 0.00 0.00 41.28 4.02
1685 2055 7.992608 TGCTAAGAGTCCATTTCATTTATGCTA 59.007 33.333 0.00 0.00 0.00 3.49
1700 2070 4.212214 CCGCTAATGATTTGCTAAGAGTCC 59.788 45.833 9.68 0.00 0.00 3.85
1705 2075 5.929697 TGATCCGCTAATGATTTGCTAAG 57.070 39.130 9.68 0.00 0.00 2.18
1786 2161 5.118286 TGACAGTCTATGTATGGCACAATG 58.882 41.667 1.31 0.00 43.20 2.82
1788 2163 4.817318 TGACAGTCTATGTATGGCACAA 57.183 40.909 1.31 0.00 43.20 3.33
1790 2165 4.948847 TGATGACAGTCTATGTATGGCAC 58.051 43.478 1.31 0.00 44.17 5.01
1822 2197 7.439356 GCACTTTCATCAATACAGAGCATAGTA 59.561 37.037 0.00 0.00 0.00 1.82
1825 2200 6.351711 AGCACTTTCATCAATACAGAGCATA 58.648 36.000 0.00 0.00 0.00 3.14
1829 2204 7.642978 GCATTTAGCACTTTCATCAATACAGAG 59.357 37.037 0.00 0.00 44.79 3.35
1842 2217 1.156736 AGCGACGCATTTAGCACTTT 58.843 45.000 23.70 0.00 46.13 2.66
1845 2220 1.250476 CAAAGCGACGCATTTAGCAC 58.750 50.000 23.70 0.00 46.13 4.40
1854 2229 0.519175 CATACACAGCAAAGCGACGC 60.519 55.000 13.03 13.03 0.00 5.19
1856 2231 1.438651 TCCATACACAGCAAAGCGAC 58.561 50.000 0.00 0.00 0.00 5.19
1857 2232 1.804151 GTTCCATACACAGCAAAGCGA 59.196 47.619 0.00 0.00 0.00 4.93
1859 2234 2.813754 TCTGTTCCATACACAGCAAAGC 59.186 45.455 0.00 0.00 41.37 3.51
1860 2235 6.722301 CATATCTGTTCCATACACAGCAAAG 58.278 40.000 0.00 0.00 41.37 2.77
1861 2236 5.066375 GCATATCTGTTCCATACACAGCAAA 59.934 40.000 0.00 0.00 41.37 3.68
1865 2240 7.157347 ACATAGCATATCTGTTCCATACACAG 58.843 38.462 0.00 0.00 42.74 3.66
1866 2241 7.066307 ACATAGCATATCTGTTCCATACACA 57.934 36.000 0.00 0.00 32.10 3.72
1867 2242 7.969536 AACATAGCATATCTGTTCCATACAC 57.030 36.000 0.00 0.00 32.10 2.90
1868 2243 9.710900 CTAAACATAGCATATCTGTTCCATACA 57.289 33.333 0.00 0.00 32.18 2.29
1869 2244 9.929180 TCTAAACATAGCATATCTGTTCCATAC 57.071 33.333 0.00 0.00 32.18 2.39
1871 2246 9.851686 TTTCTAAACATAGCATATCTGTTCCAT 57.148 29.630 0.00 0.00 32.18 3.41
1872 2247 9.330063 CTTTCTAAACATAGCATATCTGTTCCA 57.670 33.333 0.00 0.00 32.18 3.53
1873 2248 8.778358 CCTTTCTAAACATAGCATATCTGTTCC 58.222 37.037 0.00 0.00 32.18 3.62
1877 2252 9.330063 TGTTCCTTTCTAAACATAGCATATCTG 57.670 33.333 0.00 0.00 30.73 2.90
1879 2254 9.937175 GTTGTTCCTTTCTAAACATAGCATATC 57.063 33.333 0.00 0.00 35.46 1.63
1901 2276 5.086104 ACAGATAATTAGCACCGAGTTGT 57.914 39.130 3.17 0.00 0.00 3.32
1902 2277 6.422776 AAACAGATAATTAGCACCGAGTTG 57.577 37.500 3.17 0.00 0.00 3.16
1947 2325 5.117355 ACAGATGCAACTTTTCATCACAG 57.883 39.130 0.00 0.00 41.02 3.66
1973 2351 0.456312 GGTAGCAGAACTCGTGTCCG 60.456 60.000 0.00 0.00 0.00 4.79
2070 2451 1.160137 CCTCCTTCCAGCTTTTGTCG 58.840 55.000 0.00 0.00 0.00 4.35
2112 2493 1.341976 ACTGCATTGTGGGGGTAATCC 60.342 52.381 0.00 0.00 0.00 3.01
2127 2508 0.831711 TGCACCTCAGTAGGACTGCA 60.832 55.000 5.81 5.81 46.92 4.41
2316 2697 4.572571 AACGGGCAACTTGGGCGA 62.573 61.111 0.00 0.00 0.00 5.54
2331 2712 3.062639 CGATAACATCACCTCTGCACAAC 59.937 47.826 0.00 0.00 0.00 3.32
2364 2745 1.140589 CAGACGAGCCTCGCTGATT 59.859 57.895 24.55 3.55 45.12 2.57
2466 2847 2.095059 GCGTGAATCTGGATGCTTTTGT 60.095 45.455 0.00 0.00 0.00 2.83
2568 2949 5.163519 GCCATTAGGAACTTGTGCATGTATT 60.164 40.000 0.00 0.00 41.75 1.89
2592 2973 3.312697 TGACATAGTCTCCGAGAACGATG 59.687 47.826 0.00 8.97 36.14 3.84
2721 3102 0.744281 CTCTCCCTCTTCTTCGGCTC 59.256 60.000 0.00 0.00 0.00 4.70
2750 3131 4.034410 GTTCCTCCTTCCACTTCCTCTAT 58.966 47.826 0.00 0.00 0.00 1.98
2874 3255 3.437491 CCATACTAGGTACTGCCCCTGTA 60.437 52.174 0.00 0.00 41.52 2.74
2883 3264 3.446968 TGGTGTTGCCATACTAGGTACT 58.553 45.455 0.00 0.00 43.61 2.73
2986 3386 2.448453 AGAGAACGGAGGGAGTACTTG 58.552 52.381 0.00 0.00 0.00 3.16
2987 3387 2.903375 AGAGAACGGAGGGAGTACTT 57.097 50.000 0.00 0.00 0.00 2.24
2989 3389 6.093909 GCTATAATAGAGAACGGAGGGAGTAC 59.906 46.154 0.00 0.00 0.00 2.73
2994 3394 4.767928 ACAGCTATAATAGAGAACGGAGGG 59.232 45.833 0.00 0.00 0.00 4.30
2995 3395 5.968528 ACAGCTATAATAGAGAACGGAGG 57.031 43.478 0.00 0.00 0.00 4.30
2996 3396 9.400638 CTAAAACAGCTATAATAGAGAACGGAG 57.599 37.037 0.00 0.00 0.00 4.63
2998 3398 8.969267 CACTAAAACAGCTATAATAGAGAACGG 58.031 37.037 0.00 0.00 0.00 4.44
2999 3399 9.517609 ACACTAAAACAGCTATAATAGAGAACG 57.482 33.333 0.00 0.00 0.00 3.95
3004 3404 9.378551 CCAACACACTAAAACAGCTATAATAGA 57.621 33.333 0.00 0.00 0.00 1.98
3005 3405 9.162764 ACCAACACACTAAAACAGCTATAATAG 57.837 33.333 0.00 0.00 0.00 1.73
3006 3406 9.509956 AACCAACACACTAAAACAGCTATAATA 57.490 29.630 0.00 0.00 0.00 0.98
3009 3409 6.993308 TGAACCAACACACTAAAACAGCTATA 59.007 34.615 0.00 0.00 0.00 1.31
3010 3410 5.825679 TGAACCAACACACTAAAACAGCTAT 59.174 36.000 0.00 0.00 0.00 2.97
3015 3415 6.516739 TGAATGAACCAACACACTAAAACA 57.483 33.333 0.00 0.00 0.00 2.83
3029 3464 6.795399 ACATACGGATTGAAATGAATGAACC 58.205 36.000 0.00 0.00 0.00 3.62
3033 3468 7.226523 TGGACTACATACGGATTGAAATGAATG 59.773 37.037 0.00 0.00 0.00 2.67
3034 3469 7.279615 TGGACTACATACGGATTGAAATGAAT 58.720 34.615 0.00 0.00 0.00 2.57
3041 3476 7.533289 TCAATATGGACTACATACGGATTGA 57.467 36.000 0.00 0.00 44.41 2.57
3042 3477 8.601845 TTTCAATATGGACTACATACGGATTG 57.398 34.615 0.00 0.00 44.41 2.67
3105 3540 3.324846 TGGACTAGTATGCAGCTATTGGG 59.675 47.826 0.00 0.00 0.00 4.12
3132 3567 5.503927 ACAGAAAGCAGTCATATTGGTGAT 58.496 37.500 0.00 0.00 0.00 3.06
3171 3606 4.638304 TGGTTACTACAGGAAGCAGTTTC 58.362 43.478 1.93 0.00 34.93 2.78
3172 3607 4.699925 TGGTTACTACAGGAAGCAGTTT 57.300 40.909 1.93 0.00 0.00 2.66
3173 3608 4.532521 AGATGGTTACTACAGGAAGCAGTT 59.467 41.667 11.44 0.00 36.58 3.16
3174 3609 4.097418 AGATGGTTACTACAGGAAGCAGT 58.903 43.478 11.44 0.00 36.58 4.40
3175 3610 4.744795 AGATGGTTACTACAGGAAGCAG 57.255 45.455 11.44 0.00 36.58 4.24
3176 3611 4.777896 AGAAGATGGTTACTACAGGAAGCA 59.222 41.667 8.44 8.44 37.45 3.91
3177 3612 5.346181 AGAAGATGGTTACTACAGGAAGC 57.654 43.478 0.00 0.00 0.00 3.86
3178 3613 5.659079 AGGAGAAGATGGTTACTACAGGAAG 59.341 44.000 0.00 0.00 0.00 3.46
3179 3614 5.590818 AGGAGAAGATGGTTACTACAGGAA 58.409 41.667 0.00 0.00 0.00 3.36
3180 3615 5.208294 AGGAGAAGATGGTTACTACAGGA 57.792 43.478 0.00 0.00 0.00 3.86
3181 3616 7.007723 AGATAGGAGAAGATGGTTACTACAGG 58.992 42.308 0.00 0.00 0.00 4.00
3182 3617 7.504238 ACAGATAGGAGAAGATGGTTACTACAG 59.496 40.741 0.00 0.00 0.00 2.74
3187 3622 7.147811 ACAGAACAGATAGGAGAAGATGGTTAC 60.148 40.741 0.00 0.00 0.00 2.50
3257 3695 6.430616 AGCATAAAATCCCCACACAAAAATTG 59.569 34.615 0.00 0.00 0.00 2.32
3260 3698 5.303971 CAGCATAAAATCCCCACACAAAAA 58.696 37.500 0.00 0.00 0.00 1.94
3265 3713 1.824230 TGCAGCATAAAATCCCCACAC 59.176 47.619 0.00 0.00 0.00 3.82
3270 3718 3.026694 ACTCCTTGCAGCATAAAATCCC 58.973 45.455 0.00 0.00 0.00 3.85
3331 3779 7.881775 AAGCAAATTCTATAAATCGGAAGGT 57.118 32.000 0.00 0.00 0.00 3.50
3370 3820 8.062065 AGAGAAAGAAGATAACTCGATCAAGT 57.938 34.615 0.00 0.00 33.53 3.16
3401 3851 6.701841 GCATCATACATTAGAAAGAGTCGGAA 59.298 38.462 0.00 0.00 0.00 4.30
3648 4100 5.150683 TGAAAATCTATTGCAAACGAACGG 58.849 37.500 1.71 0.00 0.00 4.44
3709 4164 3.449377 TCACCGGCATCACTGTATAAGAA 59.551 43.478 0.00 0.00 0.00 2.52
3793 4256 0.470766 AAACTGTAACCACGGCTGGA 59.529 50.000 9.53 0.00 40.55 3.86
3813 4276 6.984474 TCTCAGATATCACCGACCAAATTAAC 59.016 38.462 5.32 0.00 0.00 2.01
3815 4278 6.513180 GTCTCAGATATCACCGACCAAATTA 58.487 40.000 5.32 0.00 0.00 1.40
3824 4287 2.287069 GGTGTCGTCTCAGATATCACCG 60.287 54.545 5.32 0.00 35.36 4.94
3831 4294 2.711922 GCCCGGTGTCGTCTCAGAT 61.712 63.158 0.00 0.00 33.95 2.90
3850 4313 2.891580 ACCTGACACTGACAGATAACGT 59.108 45.455 10.08 0.00 37.54 3.99
3858 4321 2.483714 GCTTCTTCACCTGACACTGACA 60.484 50.000 0.00 0.00 0.00 3.58
3859 4322 2.139118 GCTTCTTCACCTGACACTGAC 58.861 52.381 0.00 0.00 0.00 3.51
3860 4323 2.042464 AGCTTCTTCACCTGACACTGA 58.958 47.619 0.00 0.00 0.00 3.41
3861 4324 2.540265 AGCTTCTTCACCTGACACTG 57.460 50.000 0.00 0.00 0.00 3.66
3862 4325 2.224402 GGAAGCTTCTTCACCTGACACT 60.224 50.000 25.05 0.00 0.00 3.55
3863 4326 2.147150 GGAAGCTTCTTCACCTGACAC 58.853 52.381 25.05 0.96 0.00 3.67
3903 4984 3.687102 CGCACCCGTGTGACCCTA 61.687 66.667 0.90 0.00 45.76 3.53
3982 5063 3.282157 AGTGCCTGCAACAGCACG 61.282 61.111 22.93 0.00 40.55 5.34
3989 5070 0.953727 CTTGCTTACAGTGCCTGCAA 59.046 50.000 13.87 13.87 40.65 4.08
4106 5187 3.199289 TGAGATTCCATCATCAGCACACT 59.801 43.478 0.00 0.00 0.00 3.55
4139 5225 2.167861 GGAGCGTCGAATCAGCACC 61.168 63.158 0.00 0.00 34.78 5.01
4146 5232 0.822532 ATAGACCCGGAGCGTCGAAT 60.823 55.000 0.73 0.00 35.33 3.34
4221 5313 0.179240 GTCAATCACAGAGCGCGTTG 60.179 55.000 8.43 7.25 0.00 4.10
4276 5503 2.432628 GAACTCAGGCGGTCGGTG 60.433 66.667 0.00 0.00 0.00 4.94
4277 5504 1.755393 AAAGAACTCAGGCGGTCGGT 61.755 55.000 0.00 0.00 0.00 4.69
4285 5512 6.109359 CCACAGGTAATCTAAAGAACTCAGG 58.891 44.000 0.00 0.00 0.00 3.86
4286 5513 5.582665 GCCACAGGTAATCTAAAGAACTCAG 59.417 44.000 0.00 0.00 0.00 3.35
4287 5514 5.488341 GCCACAGGTAATCTAAAGAACTCA 58.512 41.667 0.00 0.00 0.00 3.41
4330 5557 5.363580 ACAATTTTGTCAATGTCAAGGAGGT 59.636 36.000 0.00 0.00 36.50 3.85
4344 5575 9.727627 GATCAGGATAAGATGAACAATTTTGTC 57.272 33.333 0.00 0.00 41.31 3.18
4348 5579 6.016777 GCGGATCAGGATAAGATGAACAATTT 60.017 38.462 0.00 0.00 0.00 1.82
4352 5586 3.552890 CGCGGATCAGGATAAGATGAACA 60.553 47.826 0.00 0.00 0.00 3.18
4391 5625 6.051074 CAGATATCGCCATCAGCCAAATATA 58.949 40.000 0.00 0.00 38.78 0.86
4451 5688 9.651913 TTAAACATTCTGAAACTGCTTTTCTTT 57.348 25.926 11.23 6.27 43.70 2.52
4517 5754 0.742281 CATGAAGGGTGCAGAGACCG 60.742 60.000 0.00 0.00 36.80 4.79
4518 5755 0.393537 CCATGAAGGGTGCAGAGACC 60.394 60.000 0.00 0.00 34.96 3.85
4519 5756 3.165606 CCATGAAGGGTGCAGAGAC 57.834 57.895 0.00 0.00 0.00 3.36
4529 5766 2.276740 GAGGTGCCCCCATGAAGG 59.723 66.667 0.00 0.00 34.66 3.46
4530 5767 1.941403 ATGGAGGTGCCCCCATGAAG 61.941 60.000 3.31 0.00 41.32 3.02
4531 5768 1.935400 ATGGAGGTGCCCCCATGAA 60.935 57.895 3.31 0.00 41.32 2.57
4532 5769 2.287117 ATGGAGGTGCCCCCATGA 60.287 61.111 3.31 0.00 41.32 3.07
4533 5770 2.196776 GATGGAGGTGCCCCCATG 59.803 66.667 9.08 0.00 42.80 3.66
4534 5771 2.045132 AGATGGAGGTGCCCCCAT 59.955 61.111 3.79 3.79 45.22 4.00
4535 5772 2.692368 GAGATGGAGGTGCCCCCA 60.692 66.667 0.00 0.00 36.79 4.96
4536 5773 2.692368 TGAGATGGAGGTGCCCCC 60.692 66.667 0.00 0.00 34.97 5.40
4537 5774 2.914289 CTGAGATGGAGGTGCCCC 59.086 66.667 0.00 0.00 34.97 5.80
4538 5775 2.191641 GCTGAGATGGAGGTGCCC 59.808 66.667 0.00 0.00 34.97 5.36
4539 5776 2.191641 GGCTGAGATGGAGGTGCC 59.808 66.667 0.00 0.00 37.10 5.01
4540 5777 2.037620 ATCGGCTGAGATGGAGGTGC 62.038 60.000 0.00 0.00 0.00 5.01
4541 5778 0.033228 GATCGGCTGAGATGGAGGTG 59.967 60.000 0.00 0.00 0.00 4.00
4542 5779 1.118356 GGATCGGCTGAGATGGAGGT 61.118 60.000 0.00 0.00 0.00 3.85
4543 5780 1.670590 GGATCGGCTGAGATGGAGG 59.329 63.158 0.00 0.00 0.00 4.30
4544 5781 0.831288 AGGGATCGGCTGAGATGGAG 60.831 60.000 0.00 0.00 0.00 3.86
4545 5782 0.829602 GAGGGATCGGCTGAGATGGA 60.830 60.000 0.00 0.00 0.00 3.41
4546 5783 1.670590 GAGGGATCGGCTGAGATGG 59.329 63.158 0.00 0.00 0.00 3.51
4547 5784 1.288439 CGAGGGATCGGCTGAGATG 59.712 63.158 0.00 0.00 0.00 2.90
4548 5785 1.905843 CCGAGGGATCGGCTGAGAT 60.906 63.158 3.44 0.00 46.76 2.75
4549 5786 2.519541 CCGAGGGATCGGCTGAGA 60.520 66.667 3.44 0.00 46.76 3.27
4557 5794 3.226429 TAGCATGCGCCGAGGGATC 62.226 63.158 13.01 0.00 39.83 3.36
4558 5795 3.233980 TAGCATGCGCCGAGGGAT 61.234 61.111 13.01 0.00 39.83 3.85
4559 5796 4.221422 GTAGCATGCGCCGAGGGA 62.221 66.667 13.01 0.00 39.83 4.20
4560 5797 4.529219 TGTAGCATGCGCCGAGGG 62.529 66.667 13.01 0.00 39.83 4.30
4561 5798 3.264897 GTGTAGCATGCGCCGAGG 61.265 66.667 13.01 0.00 39.83 4.63
4562 5799 2.930012 TACGTGTAGCATGCGCCGAG 62.930 60.000 21.80 13.80 39.83 4.63
4563 5800 2.545165 TTACGTGTAGCATGCGCCGA 62.545 55.000 21.80 4.77 39.83 5.54
4564 5801 2.162120 TTACGTGTAGCATGCGCCG 61.162 57.895 13.01 14.90 39.83 6.46
4565 5802 1.082117 AGTTACGTGTAGCATGCGCC 61.082 55.000 13.01 7.39 39.83 6.53
4566 5803 0.719465 AAGTTACGTGTAGCATGCGC 59.281 50.000 13.01 10.18 38.99 6.09
4567 5804 1.724623 ACAAGTTACGTGTAGCATGCG 59.275 47.619 13.01 0.00 0.00 4.73
4568 5805 3.806316 AACAAGTTACGTGTAGCATGC 57.194 42.857 10.51 10.51 0.00 4.06
4569 5806 5.219969 CGACTAACAAGTTACGTGTAGCATG 60.220 44.000 4.15 0.00 0.00 4.06
4570 5807 4.855388 CGACTAACAAGTTACGTGTAGCAT 59.145 41.667 4.15 0.00 0.00 3.79
4571 5808 4.221342 CGACTAACAAGTTACGTGTAGCA 58.779 43.478 4.15 0.00 0.00 3.49
4572 5809 3.605486 CCGACTAACAAGTTACGTGTAGC 59.395 47.826 4.15 0.00 0.00 3.58
4573 5810 3.605486 GCCGACTAACAAGTTACGTGTAG 59.395 47.826 4.15 5.59 0.00 2.74
4574 5811 3.253188 AGCCGACTAACAAGTTACGTGTA 59.747 43.478 4.15 0.00 0.00 2.90
4575 5812 2.035066 AGCCGACTAACAAGTTACGTGT 59.965 45.455 0.00 0.00 0.00 4.49
4576 5813 2.407361 CAGCCGACTAACAAGTTACGTG 59.593 50.000 0.00 0.00 0.00 4.49
4577 5814 2.294233 TCAGCCGACTAACAAGTTACGT 59.706 45.455 0.00 0.00 0.00 3.57
4578 5815 2.915463 CTCAGCCGACTAACAAGTTACG 59.085 50.000 0.00 0.00 0.00 3.18
4579 5816 3.251571 CCTCAGCCGACTAACAAGTTAC 58.748 50.000 0.00 0.00 0.00 2.50
4580 5817 2.353406 GCCTCAGCCGACTAACAAGTTA 60.353 50.000 0.00 0.00 0.00 2.24
4581 5818 1.608283 GCCTCAGCCGACTAACAAGTT 60.608 52.381 0.00 0.00 0.00 2.66
4582 5819 0.037232 GCCTCAGCCGACTAACAAGT 60.037 55.000 0.00 0.00 0.00 3.16
4583 5820 1.078759 CGCCTCAGCCGACTAACAAG 61.079 60.000 0.00 0.00 34.57 3.16
4584 5821 1.080093 CGCCTCAGCCGACTAACAA 60.080 57.895 0.00 0.00 34.57 2.83
4585 5822 2.571757 CGCCTCAGCCGACTAACA 59.428 61.111 0.00 0.00 34.57 2.41
4586 5823 2.886124 GCGCCTCAGCCGACTAAC 60.886 66.667 0.00 0.00 34.57 2.34
4587 5824 4.492160 CGCGCCTCAGCCGACTAA 62.492 66.667 0.00 0.00 35.49 2.24
4593 5830 4.760047 TTTCTCCGCGCCTCAGCC 62.760 66.667 0.00 0.00 34.57 4.85
4594 5831 1.648467 AAATTTCTCCGCGCCTCAGC 61.648 55.000 0.00 0.00 0.00 4.26
4595 5832 1.594862 CTAAATTTCTCCGCGCCTCAG 59.405 52.381 0.00 0.00 0.00 3.35
4596 5833 1.651987 CTAAATTTCTCCGCGCCTCA 58.348 50.000 0.00 0.00 0.00 3.86
4597 5834 0.305009 GCTAAATTTCTCCGCGCCTC 59.695 55.000 0.00 0.00 0.00 4.70
4598 5835 1.095807 GGCTAAATTTCTCCGCGCCT 61.096 55.000 0.00 0.00 33.47 5.52
4599 5836 1.355563 GGCTAAATTTCTCCGCGCC 59.644 57.895 0.00 0.00 0.00 6.53
4600 5837 1.011131 CGGCTAAATTTCTCCGCGC 60.011 57.895 15.20 0.00 35.20 6.86
4603 5840 0.300789 GACGCGGCTAAATTTCTCCG 59.699 55.000 20.40 20.40 44.29 4.63
4604 5841 0.656259 GGACGCGGCTAAATTTCTCC 59.344 55.000 13.91 0.00 0.00 3.71
4605 5842 0.300789 CGGACGCGGCTAAATTTCTC 59.699 55.000 13.91 0.00 0.00 2.87
4606 5843 0.108520 TCGGACGCGGCTAAATTTCT 60.109 50.000 13.91 0.00 0.00 2.52
4607 5844 0.935196 ATCGGACGCGGCTAAATTTC 59.065 50.000 13.91 0.00 0.00 2.17
4608 5845 0.935196 GATCGGACGCGGCTAAATTT 59.065 50.000 13.91 0.00 0.00 1.82
4609 5846 0.104304 AGATCGGACGCGGCTAAATT 59.896 50.000 13.91 0.00 0.00 1.82
4610 5847 0.597637 CAGATCGGACGCGGCTAAAT 60.598 55.000 13.91 2.31 0.00 1.40
4611 5848 1.226859 CAGATCGGACGCGGCTAAA 60.227 57.895 13.91 0.00 0.00 1.85
4612 5849 2.411701 CAGATCGGACGCGGCTAA 59.588 61.111 13.91 0.00 0.00 3.09
4613 5850 4.266070 GCAGATCGGACGCGGCTA 62.266 66.667 13.91 0.00 0.00 3.93
4616 5853 4.498520 ACAGCAGATCGGACGCGG 62.499 66.667 12.47 0.00 0.00 6.46
4617 5854 2.951745 GACAGCAGATCGGACGCG 60.952 66.667 3.53 3.53 0.00 6.01
4618 5855 2.951745 CGACAGCAGATCGGACGC 60.952 66.667 0.00 0.00 35.92 5.19
4623 5860 1.959899 GCACAACCGACAGCAGATCG 61.960 60.000 0.00 0.00 39.33 3.69
4624 5861 1.639298 GGCACAACCGACAGCAGATC 61.639 60.000 0.00 0.00 0.00 2.75
4625 5862 1.672356 GGCACAACCGACAGCAGAT 60.672 57.895 0.00 0.00 0.00 2.90
4626 5863 2.280797 GGCACAACCGACAGCAGA 60.281 61.111 0.00 0.00 0.00 4.26
4627 5864 3.357079 GGGCACAACCGACAGCAG 61.357 66.667 0.00 0.00 40.62 4.24
4628 5865 3.705934 TTGGGCACAACCGACAGCA 62.706 57.895 0.00 0.00 40.62 4.41
4629 5866 2.904866 TTGGGCACAACCGACAGC 60.905 61.111 0.00 0.00 40.62 4.40
4637 5874 0.610174 TGTTGCAAAGTTGGGCACAA 59.390 45.000 0.00 0.00 40.23 3.33
4638 5875 0.108424 GTGTTGCAAAGTTGGGCACA 60.108 50.000 0.00 0.00 40.23 4.57
4639 5876 1.145162 CGTGTTGCAAAGTTGGGCAC 61.145 55.000 0.00 2.08 40.23 5.01
4640 5877 1.140589 CGTGTTGCAAAGTTGGGCA 59.859 52.632 0.00 0.00 38.46 5.36
4641 5878 0.594796 CTCGTGTTGCAAAGTTGGGC 60.595 55.000 0.00 0.00 0.00 5.36
4642 5879 0.738389 ACTCGTGTTGCAAAGTTGGG 59.262 50.000 0.00 0.00 0.00 4.12
4643 5880 1.400142 TGACTCGTGTTGCAAAGTTGG 59.600 47.619 0.00 0.00 0.00 3.77
4644 5881 2.823196 TGACTCGTGTTGCAAAGTTG 57.177 45.000 0.00 0.00 0.00 3.16
4645 5882 2.682856 ACATGACTCGTGTTGCAAAGTT 59.317 40.909 0.00 0.00 28.11 2.66
4646 5883 2.288666 ACATGACTCGTGTTGCAAAGT 58.711 42.857 0.00 0.00 28.11 2.66
4647 5884 3.338818 AACATGACTCGTGTTGCAAAG 57.661 42.857 14.66 0.00 41.32 2.77
4653 5890 0.531974 ACGGCAACATGACTCGTGTT 60.532 50.000 10.38 10.38 43.30 3.32
4654 5891 0.315886 TACGGCAACATGACTCGTGT 59.684 50.000 0.00 0.00 34.83 4.49
4655 5892 1.424403 TTACGGCAACATGACTCGTG 58.576 50.000 0.00 0.00 35.60 4.35
4656 5893 1.796459 GTTTACGGCAACATGACTCGT 59.204 47.619 0.00 6.55 37.78 4.18
4657 5894 1.795872 TGTTTACGGCAACATGACTCG 59.204 47.619 0.00 0.18 31.48 4.18
4658 5895 4.154195 AGAATGTTTACGGCAACATGACTC 59.846 41.667 13.44 8.78 44.95 3.36
4659 5896 4.072131 AGAATGTTTACGGCAACATGACT 58.928 39.130 13.44 12.65 44.95 3.41
4660 5897 4.419522 AGAATGTTTACGGCAACATGAC 57.580 40.909 13.44 11.11 44.95 3.06
4661 5898 4.517075 TGAAGAATGTTTACGGCAACATGA 59.483 37.500 13.44 0.00 44.95 3.07
4662 5899 4.793071 TGAAGAATGTTTACGGCAACATG 58.207 39.130 13.44 0.00 44.95 3.21
4664 5901 4.793071 CATGAAGAATGTTTACGGCAACA 58.207 39.130 4.36 4.36 40.92 3.33
4686 5923 5.634896 CAACATCTGCTATGTTCCTGAAAC 58.365 41.667 13.09 0.00 39.94 2.78
4687 5924 5.885230 CAACATCTGCTATGTTCCTGAAA 57.115 39.130 13.09 0.00 39.94 2.69
4710 5947 3.361158 TTGAATGCCGGTGCGTGG 61.361 61.111 1.90 0.00 41.78 4.94
4711 5948 2.126888 GTTGAATGCCGGTGCGTG 60.127 61.111 1.90 0.00 41.78 5.34
4712 5949 1.971167 ATGTTGAATGCCGGTGCGT 60.971 52.632 1.90 0.00 41.78 5.24
4713 5950 1.514657 CATGTTGAATGCCGGTGCG 60.515 57.895 1.90 0.00 41.78 5.34
4714 5951 0.456653 GACATGTTGAATGCCGGTGC 60.457 55.000 1.90 0.00 38.26 5.01
4715 5952 0.171007 GGACATGTTGAATGCCGGTG 59.829 55.000 1.90 0.00 0.00 4.94
4716 5953 0.038166 AGGACATGTTGAATGCCGGT 59.962 50.000 1.90 0.00 0.00 5.28
4717 5954 1.176527 AAGGACATGTTGAATGCCGG 58.823 50.000 0.00 0.00 0.00 6.13
4718 5955 2.228582 TCAAAGGACATGTTGAATGCCG 59.771 45.455 0.00 0.00 30.93 5.69
4719 5956 3.940209 TCAAAGGACATGTTGAATGCC 57.060 42.857 0.00 0.00 30.93 4.40
4720 5957 5.291971 AGTTTCAAAGGACATGTTGAATGC 58.708 37.500 10.64 7.77 41.90 3.56
4721 5958 6.418819 GTGAGTTTCAAAGGACATGTTGAATG 59.581 38.462 10.64 4.41 41.90 2.67
4722 5959 6.461509 GGTGAGTTTCAAAGGACATGTTGAAT 60.462 38.462 10.64 0.00 41.90 2.57
4723 5960 5.163561 GGTGAGTTTCAAAGGACATGTTGAA 60.164 40.000 0.00 2.92 40.93 2.69
4724 5961 4.338118 GGTGAGTTTCAAAGGACATGTTGA 59.662 41.667 0.00 0.00 31.99 3.18
4725 5962 4.097741 TGGTGAGTTTCAAAGGACATGTTG 59.902 41.667 0.00 0.00 0.00 3.33
4726 5963 4.277476 TGGTGAGTTTCAAAGGACATGTT 58.723 39.130 0.00 0.00 0.00 2.71
4727 5964 3.897239 TGGTGAGTTTCAAAGGACATGT 58.103 40.909 0.00 0.00 0.00 3.21
4728 5965 4.339247 ACTTGGTGAGTTTCAAAGGACATG 59.661 41.667 0.00 0.00 33.92 3.21
4729 5966 4.536765 ACTTGGTGAGTTTCAAAGGACAT 58.463 39.130 0.00 0.00 33.92 3.06
4730 5967 3.963129 ACTTGGTGAGTTTCAAAGGACA 58.037 40.909 0.00 0.00 33.92 4.02
4731 5968 4.983671 AACTTGGTGAGTTTCAAAGGAC 57.016 40.909 0.00 0.00 46.34 3.85
4741 5978 1.406539 CTTGCTGCAAACTTGGTGAGT 59.593 47.619 16.74 0.00 41.47 3.41
4742 5979 1.866880 GCTTGCTGCAAACTTGGTGAG 60.867 52.381 16.74 2.19 42.31 3.51
4743 5980 0.102844 GCTTGCTGCAAACTTGGTGA 59.897 50.000 16.74 0.00 42.31 4.02
4744 5981 2.596875 GCTTGCTGCAAACTTGGTG 58.403 52.632 16.74 3.94 42.31 4.17
4757 5994 2.910440 ATGCTAAAGGGGCATGCTTGC 61.910 52.381 18.92 15.87 46.85 4.01
4758 5995 1.117150 ATGCTAAAGGGGCATGCTTG 58.883 50.000 18.92 0.00 46.85 4.01
4759 5996 3.621419 ATGCTAAAGGGGCATGCTT 57.379 47.368 18.92 6.39 46.85 3.91
4764 6001 2.440065 CGGCATGCTAAAGGGGCA 60.440 61.111 18.92 0.00 44.05 5.36
4765 6002 2.004808 GAACGGCATGCTAAAGGGGC 62.005 60.000 18.92 0.00 0.00 5.80
4766 6003 1.714899 CGAACGGCATGCTAAAGGGG 61.715 60.000 18.92 1.23 0.00 4.79
4767 6004 0.742990 TCGAACGGCATGCTAAAGGG 60.743 55.000 18.92 3.34 0.00 3.95
4768 6005 1.083489 TTCGAACGGCATGCTAAAGG 58.917 50.000 18.92 4.99 0.00 3.11
4769 6006 2.159627 AGTTTCGAACGGCATGCTAAAG 59.840 45.455 18.92 9.35 36.23 1.85
4770 6007 2.147958 AGTTTCGAACGGCATGCTAAA 58.852 42.857 18.92 6.26 36.23 1.85
4771 6008 1.730064 GAGTTTCGAACGGCATGCTAA 59.270 47.619 18.92 0.14 36.23 3.09
4772 6009 1.337354 TGAGTTTCGAACGGCATGCTA 60.337 47.619 18.92 0.00 36.23 3.49
4773 6010 0.602638 TGAGTTTCGAACGGCATGCT 60.603 50.000 18.92 0.00 36.23 3.79
4774 6011 0.452784 GTGAGTTTCGAACGGCATGC 60.453 55.000 9.90 9.90 36.23 4.06
4775 6012 1.148310 AGTGAGTTTCGAACGGCATG 58.852 50.000 0.00 0.00 36.23 4.06
4776 6013 2.736144 TAGTGAGTTTCGAACGGCAT 57.264 45.000 0.00 0.00 36.23 4.40
4777 6014 2.512485 TTAGTGAGTTTCGAACGGCA 57.488 45.000 0.00 0.00 36.23 5.69
4778 6015 2.798847 ACTTTAGTGAGTTTCGAACGGC 59.201 45.455 0.00 0.00 36.23 5.68
4779 6016 4.758561 CAACTTTAGTGAGTTTCGAACGG 58.241 43.478 0.00 0.00 37.76 4.44
4780 6017 4.201576 GCAACTTTAGTGAGTTTCGAACG 58.798 43.478 0.00 0.00 37.76 3.95
4781 6018 5.151632 TGCAACTTTAGTGAGTTTCGAAC 57.848 39.130 0.00 0.00 37.76 3.95
4782 6019 4.260620 GCTGCAACTTTAGTGAGTTTCGAA 60.261 41.667 0.00 0.00 37.76 3.71
4783 6020 3.247648 GCTGCAACTTTAGTGAGTTTCGA 59.752 43.478 0.00 0.00 37.76 3.71
4784 6021 3.002246 TGCTGCAACTTTAGTGAGTTTCG 59.998 43.478 0.00 0.00 37.76 3.46
4785 6022 4.552166 TGCTGCAACTTTAGTGAGTTTC 57.448 40.909 0.00 0.00 37.76 2.78
4786 6023 4.440112 GGTTGCTGCAACTTTAGTGAGTTT 60.440 41.667 35.76 0.00 43.14 2.66
4787 6024 3.066760 GGTTGCTGCAACTTTAGTGAGTT 59.933 43.478 35.76 0.00 43.14 3.01
4788 6025 2.618709 GGTTGCTGCAACTTTAGTGAGT 59.381 45.455 35.76 0.00 43.14 3.41
4789 6026 2.618241 TGGTTGCTGCAACTTTAGTGAG 59.382 45.455 35.76 0.00 43.14 3.51
4790 6027 2.357637 GTGGTTGCTGCAACTTTAGTGA 59.642 45.455 35.76 14.68 43.14 3.41
4791 6028 2.731217 GTGGTTGCTGCAACTTTAGTG 58.269 47.619 35.76 0.00 43.14 2.74
4792 6029 1.333619 CGTGGTTGCTGCAACTTTAGT 59.666 47.619 35.76 0.00 43.14 2.24
4793 6030 1.925946 GCGTGGTTGCTGCAACTTTAG 60.926 52.381 35.76 26.21 43.14 1.85
4794 6031 0.030101 GCGTGGTTGCTGCAACTTTA 59.970 50.000 35.76 23.23 43.14 1.85
4795 6032 1.226945 GCGTGGTTGCTGCAACTTT 60.227 52.632 35.76 0.00 43.14 2.66
4796 6033 2.412937 GCGTGGTTGCTGCAACTT 59.587 55.556 35.76 0.00 43.14 2.66
4797 6034 3.595758 GGCGTGGTTGCTGCAACT 61.596 61.111 35.76 0.00 43.14 3.16
4798 6035 4.645921 GGGCGTGGTTGCTGCAAC 62.646 66.667 31.78 31.78 42.89 4.17
4819 6056 2.338015 AAGATGCCGTGCTGCAAGG 61.338 57.895 27.09 27.09 45.84 3.61
4820 6057 1.154093 CAAGATGCCGTGCTGCAAG 60.154 57.895 2.77 6.18 45.84 4.01
4821 6058 2.628696 CCAAGATGCCGTGCTGCAA 61.629 57.895 2.77 0.00 45.84 4.08
4822 6059 3.057548 CCAAGATGCCGTGCTGCA 61.058 61.111 0.00 0.00 46.94 4.41
4823 6060 3.058160 ACCAAGATGCCGTGCTGC 61.058 61.111 0.00 0.00 0.00 5.25
4824 6061 2.872557 CACCAAGATGCCGTGCTG 59.127 61.111 0.00 0.00 0.00 4.41
4831 6068 2.401766 CCGACAGGCACCAAGATGC 61.402 63.158 0.00 0.00 45.34 3.91
4832 6069 0.742281 CTCCGACAGGCACCAAGATG 60.742 60.000 0.00 0.00 37.47 2.90
4833 6070 1.194781 ACTCCGACAGGCACCAAGAT 61.195 55.000 0.00 0.00 37.47 2.40
4834 6071 1.407656 AACTCCGACAGGCACCAAGA 61.408 55.000 0.00 0.00 37.47 3.02
4835 6072 1.071471 AACTCCGACAGGCACCAAG 59.929 57.895 0.00 0.00 37.47 3.61
4836 6073 1.227823 CAACTCCGACAGGCACCAA 60.228 57.895 0.00 0.00 37.47 3.67
4837 6074 2.425592 CAACTCCGACAGGCACCA 59.574 61.111 0.00 0.00 37.47 4.17
4838 6075 3.050275 GCAACTCCGACAGGCACC 61.050 66.667 0.00 0.00 37.47 5.01
4839 6076 3.414700 CGCAACTCCGACAGGCAC 61.415 66.667 0.00 0.00 37.47 5.01
4840 6077 2.942796 ATCGCAACTCCGACAGGCA 61.943 57.895 0.00 0.00 40.40 4.75
4841 6078 2.125512 ATCGCAACTCCGACAGGC 60.126 61.111 0.00 0.00 40.40 4.85
4842 6079 2.456119 GCATCGCAACTCCGACAGG 61.456 63.158 0.00 0.00 40.40 4.00
4843 6080 2.456119 GGCATCGCAACTCCGACAG 61.456 63.158 0.00 0.00 40.40 3.51
4844 6081 2.434185 GGCATCGCAACTCCGACA 60.434 61.111 0.00 0.00 40.40 4.35
4845 6082 3.554692 CGGCATCGCAACTCCGAC 61.555 66.667 0.00 0.00 44.23 4.79
4846 6083 4.812476 CCGGCATCGCAACTCCGA 62.812 66.667 6.10 0.00 44.23 4.55
4848 6085 3.733344 TAGCCGGCATCGCAACTCC 62.733 63.158 31.54 0.00 34.56 3.85
4849 6086 2.202878 TAGCCGGCATCGCAACTC 60.203 61.111 31.54 0.00 34.56 3.01
4850 6087 2.511600 GTAGCCGGCATCGCAACT 60.512 61.111 31.54 7.63 34.56 3.16
4851 6088 2.817834 TGTAGCCGGCATCGCAAC 60.818 61.111 31.54 16.13 34.56 4.17
4852 6089 2.817834 GTGTAGCCGGCATCGCAA 60.818 61.111 31.54 4.51 34.56 4.85
4853 6090 4.075854 TGTGTAGCCGGCATCGCA 62.076 61.111 31.54 27.82 34.56 5.10
4854 6091 3.564027 GTGTGTAGCCGGCATCGC 61.564 66.667 31.54 25.60 34.56 4.58
4855 6092 1.421410 GAAGTGTGTAGCCGGCATCG 61.421 60.000 31.54 0.00 0.00 3.84
4856 6093 1.090052 GGAAGTGTGTAGCCGGCATC 61.090 60.000 31.54 21.00 0.00 3.91
4857 6094 1.078426 GGAAGTGTGTAGCCGGCAT 60.078 57.895 31.54 16.46 0.00 4.40
4858 6095 1.764571 AAGGAAGTGTGTAGCCGGCA 61.765 55.000 31.54 12.31 0.00 5.69
4859 6096 1.003718 AAGGAAGTGTGTAGCCGGC 60.004 57.895 21.89 21.89 0.00 6.13
4860 6097 1.298859 GCAAGGAAGTGTGTAGCCGG 61.299 60.000 0.00 0.00 0.00 6.13
4861 6098 0.602638 TGCAAGGAAGTGTGTAGCCG 60.603 55.000 0.00 0.00 0.00 5.52
4862 6099 1.160137 CTGCAAGGAAGTGTGTAGCC 58.840 55.000 0.00 0.00 0.00 3.93
4863 6100 0.519077 GCTGCAAGGAAGTGTGTAGC 59.481 55.000 0.00 0.00 44.37 3.58
4864 6101 1.532868 GTGCTGCAAGGAAGTGTGTAG 59.467 52.381 2.77 0.00 34.45 2.74
4865 6102 1.593196 GTGCTGCAAGGAAGTGTGTA 58.407 50.000 2.77 0.00 34.45 2.90
4866 6103 1.439353 CGTGCTGCAAGGAAGTGTGT 61.439 55.000 2.77 0.00 34.45 3.72
4867 6104 1.280746 CGTGCTGCAAGGAAGTGTG 59.719 57.895 2.77 0.00 34.45 3.82
4868 6105 2.546494 GCGTGCTGCAAGGAAGTGT 61.546 57.895 16.93 0.00 45.45 3.55
4869 6106 2.253452 GCGTGCTGCAAGGAAGTG 59.747 61.111 16.93 0.00 45.45 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.