Multiple sequence alignment - TraesCS7D01G422400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G422400 chr7D 100.000 2606 0 0 1 2606 542956638 542959243 0.000000e+00 4813.0
1 TraesCS7D01G422400 chr7D 83.185 1011 90 44 666 1646 542885702 542886662 0.000000e+00 852.0
2 TraesCS7D01G422400 chr7D 83.575 828 69 38 987 1779 542825967 542826762 0.000000e+00 713.0
3 TraesCS7D01G422400 chr7D 87.805 205 17 6 679 881 542825188 542825386 1.560000e-57 233.0
4 TraesCS7D01G422400 chr7D 82.584 178 16 9 1834 2007 542886804 542886970 2.700000e-30 143.0
5 TraesCS7D01G422400 chr7D 78.344 157 18 9 420 568 542824915 542825063 1.280000e-13 87.9
6 TraesCS7D01G422400 chr7D 97.561 41 1 0 527 567 542885563 542885603 1.290000e-08 71.3
7 TraesCS7D01G422400 chr7B 89.533 1414 92 29 883 2250 586240555 586241958 0.000000e+00 1740.0
8 TraesCS7D01G422400 chr7B 83.719 1554 131 67 414 1869 586115858 586117387 0.000000e+00 1356.0
9 TraesCS7D01G422400 chr7B 82.295 1124 119 44 687 1779 585944256 585945330 0.000000e+00 900.0
10 TraesCS7D01G422400 chr7B 80.931 1138 120 51 687 1779 586067009 586068094 0.000000e+00 809.0
11 TraesCS7D01G422400 chr7B 84.932 584 69 10 1113 1683 586128947 586129524 8.090000e-160 573.0
12 TraesCS7D01G422400 chr7B 80.341 763 96 29 811 1552 585991623 585992352 1.780000e-146 529.0
13 TraesCS7D01G422400 chr7B 90.909 264 9 8 629 883 586237110 586237367 8.930000e-90 340.0
14 TraesCS7D01G422400 chr7B 86.245 269 32 2 1968 2231 586163804 586164072 1.180000e-73 287.0
15 TraesCS7D01G422400 chr7B 88.144 194 9 4 396 578 586236744 586236934 4.370000e-53 219.0
16 TraesCS7D01G422400 chr7B 80.224 268 37 10 1810 2072 585945634 585945890 1.230000e-43 187.0
17 TraesCS7D01G422400 chr7B 82.819 227 19 14 1 212 586236533 586236754 4.430000e-43 185.0
18 TraesCS7D01G422400 chr7B 89.855 138 7 2 575 712 586236960 586237090 1.240000e-38 171.0
19 TraesCS7D01G422400 chr7B 85.470 117 15 2 1830 1946 586090053 586090167 1.270000e-23 121.0
20 TraesCS7D01G422400 chr7B 96.078 51 0 2 527 577 586066807 586066855 5.980000e-12 82.4
21 TraesCS7D01G422400 chr7A 86.849 1171 72 39 672 1779 624957355 624958506 0.000000e+00 1234.0
22 TraesCS7D01G422400 chr7A 81.570 1134 110 49 687 1779 624840438 624841513 0.000000e+00 845.0
23 TraesCS7D01G422400 chr7A 81.283 1138 107 53 687 1779 624887046 624888122 0.000000e+00 824.0
24 TraesCS7D01G422400 chr7A 87.907 430 26 10 1957 2367 624958527 624958949 1.400000e-132 483.0
25 TraesCS7D01G422400 chr7A 85.366 246 18 11 414 642 624957114 624957358 3.350000e-59 239.0
26 TraesCS7D01G422400 chr7A 85.149 202 20 8 210 403 23786339 23786538 5.690000e-47 198.0
27 TraesCS7D01G422400 chr5D 88.360 189 16 5 210 396 496131713 496131897 3.380000e-54 222.0
28 TraesCS7D01G422400 chr1D 87.755 196 16 5 210 398 46117860 46117666 3.380000e-54 222.0
29 TraesCS7D01G422400 chr1D 85.938 192 19 5 210 395 453170208 453170397 5.690000e-47 198.0
30 TraesCS7D01G422400 chrUn 86.979 192 17 5 210 395 68268891 68268702 2.630000e-50 209.0
31 TraesCS7D01G422400 chr2D 86.528 193 18 5 210 395 647986711 647986520 3.400000e-49 206.0
32 TraesCS7D01G422400 chr4A 85.714 196 18 8 210 396 650882320 650882126 5.690000e-47 198.0
33 TraesCS7D01G422400 chr6B 85.279 197 19 6 210 397 669852996 669852801 7.360000e-46 195.0
34 TraesCS7D01G422400 chr1B 85.000 200 19 7 210 400 34700486 34700289 2.650000e-45 193.0
35 TraesCS7D01G422400 chr5A 86.538 52 5 2 2438 2488 342448158 342448208 3.620000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G422400 chr7D 542956638 542959243 2605 False 4813.000000 4813 100.000000 1 2606 1 chr7D.!!$F1 2605
1 TraesCS7D01G422400 chr7D 542885563 542886970 1407 False 355.433333 852 87.776667 527 2007 3 chr7D.!!$F3 1480
2 TraesCS7D01G422400 chr7D 542824915 542826762 1847 False 344.633333 713 83.241333 420 1779 3 chr7D.!!$F2 1359
3 TraesCS7D01G422400 chr7B 586115858 586117387 1529 False 1356.000000 1356 83.719000 414 1869 1 chr7B.!!$F3 1455
4 TraesCS7D01G422400 chr7B 586128947 586129524 577 False 573.000000 573 84.932000 1113 1683 1 chr7B.!!$F4 570
5 TraesCS7D01G422400 chr7B 585944256 585945890 1634 False 543.500000 900 81.259500 687 2072 2 chr7B.!!$F6 1385
6 TraesCS7D01G422400 chr7B 586236533 586241958 5425 False 531.000000 1740 88.252000 1 2250 5 chr7B.!!$F8 2249
7 TraesCS7D01G422400 chr7B 585991623 585992352 729 False 529.000000 529 80.341000 811 1552 1 chr7B.!!$F1 741
8 TraesCS7D01G422400 chr7B 586066807 586068094 1287 False 445.700000 809 88.504500 527 1779 2 chr7B.!!$F7 1252
9 TraesCS7D01G422400 chr7A 624840438 624841513 1075 False 845.000000 845 81.570000 687 1779 1 chr7A.!!$F2 1092
10 TraesCS7D01G422400 chr7A 624887046 624888122 1076 False 824.000000 824 81.283000 687 1779 1 chr7A.!!$F3 1092
11 TraesCS7D01G422400 chr7A 624957114 624958949 1835 False 652.000000 1234 86.707333 414 2367 3 chr7A.!!$F4 1953

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
299 314 0.042731 TACAGGGCTAGACAGGGCTT 59.957 55.0 0.0 0.0 0.0 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2222 6163 0.463654 GTTACCAGCATCGGCATGGA 60.464 55.0 10.64 0.0 44.61 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 9.757227 TGTAAATGTCGAAAAGATTCCATTTTT 57.243 25.926 10.42 0.00 37.93 1.94
70 71 9.635404 TTTTCCATTAATATTACTCGGGTTCAT 57.365 29.630 0.00 0.00 0.00 2.57
71 72 9.635404 TTTCCATTAATATTACTCGGGTTCATT 57.365 29.630 0.00 0.00 0.00 2.57
75 76 8.936864 CATTAATATTACTCGGGTTCATTCTCC 58.063 37.037 0.00 0.00 0.00 3.71
77 78 7.850935 AATATTACTCGGGTTCATTCTCCTA 57.149 36.000 0.00 0.00 0.00 2.94
91 92 9.167311 GTTCATTCTCCTAAACTTGACACATAT 57.833 33.333 0.00 0.00 0.00 1.78
92 93 8.722480 TCATTCTCCTAAACTTGACACATATG 57.278 34.615 0.00 0.00 0.00 1.78
95 96 6.711277 TCTCCTAAACTTGACACATATGCTT 58.289 36.000 1.58 0.00 0.00 3.91
96 97 6.595326 TCTCCTAAACTTGACACATATGCTTG 59.405 38.462 1.58 0.00 0.00 4.01
97 98 5.123820 TCCTAAACTTGACACATATGCTTGC 59.876 40.000 1.58 0.00 0.00 4.01
99 100 3.837213 ACTTGACACATATGCTTGCAC 57.163 42.857 1.58 0.00 0.00 4.57
105 120 5.221880 TGACACATATGCTTGCACTTTTTC 58.778 37.500 1.58 0.00 0.00 2.29
114 129 6.826893 TGCTTGCACTTTTTCTGAATTTAC 57.173 33.333 0.00 0.00 0.00 2.01
116 131 7.711846 TGCTTGCACTTTTTCTGAATTTACTA 58.288 30.769 0.00 0.00 0.00 1.82
144 159 6.014840 AGACTTTATAACGTTGGTGGAAGAGA 60.015 38.462 11.99 0.00 0.00 3.10
153 168 4.207955 GTTGGTGGAAGAGAAATATCCCC 58.792 47.826 0.00 0.00 32.01 4.81
166 181 0.485543 TATCCCCCGAGGTGCTCATA 59.514 55.000 0.00 0.00 36.75 2.15
173 188 1.521681 GAGGTGCTCATACGGGTGC 60.522 63.158 0.00 0.00 0.00 5.01
174 189 2.238847 GAGGTGCTCATACGGGTGCA 62.239 60.000 0.00 0.00 0.00 4.57
175 190 1.153168 GGTGCTCATACGGGTGCAT 60.153 57.895 0.00 0.00 37.76 3.96
176 191 1.439353 GGTGCTCATACGGGTGCATG 61.439 60.000 0.00 0.00 37.76 4.06
177 192 1.819208 TGCTCATACGGGTGCATGC 60.819 57.895 11.82 11.82 0.00 4.06
178 193 2.885676 GCTCATACGGGTGCATGCG 61.886 63.158 14.09 0.35 0.00 4.73
179 194 1.521457 CTCATACGGGTGCATGCGT 60.521 57.895 14.09 7.21 0.00 5.24
180 195 1.765161 CTCATACGGGTGCATGCGTG 61.765 60.000 14.09 0.09 0.00 5.34
212 227 0.955428 GCGTTCATCTGTTGGAGGCA 60.955 55.000 6.78 0.00 43.04 4.75
213 228 1.081892 CGTTCATCTGTTGGAGGCAG 58.918 55.000 0.00 0.00 35.43 4.85
214 229 1.457346 GTTCATCTGTTGGAGGCAGG 58.543 55.000 0.00 0.00 34.89 4.85
215 230 1.067295 TTCATCTGTTGGAGGCAGGT 58.933 50.000 0.00 0.00 34.89 4.00
216 231 0.615331 TCATCTGTTGGAGGCAGGTC 59.385 55.000 0.00 0.00 34.89 3.85
217 232 0.617413 CATCTGTTGGAGGCAGGTCT 59.383 55.000 0.00 0.00 34.89 3.85
218 233 1.004044 CATCTGTTGGAGGCAGGTCTT 59.996 52.381 0.00 0.00 34.89 3.01
219 234 2.024176 TCTGTTGGAGGCAGGTCTTA 57.976 50.000 0.00 0.00 34.89 2.10
220 235 1.623811 TCTGTTGGAGGCAGGTCTTAC 59.376 52.381 0.00 0.00 34.89 2.34
221 236 0.320374 TGTTGGAGGCAGGTCTTACG 59.680 55.000 0.00 0.00 0.00 3.18
222 237 0.320697 GTTGGAGGCAGGTCTTACGT 59.679 55.000 0.00 0.00 0.00 3.57
223 238 0.320374 TTGGAGGCAGGTCTTACGTG 59.680 55.000 0.00 0.00 37.08 4.49
224 239 1.218316 GGAGGCAGGTCTTACGTGG 59.782 63.158 0.00 0.00 34.79 4.94
225 240 1.542187 GGAGGCAGGTCTTACGTGGT 61.542 60.000 0.00 0.00 34.79 4.16
226 241 0.108756 GAGGCAGGTCTTACGTGGTC 60.109 60.000 0.00 0.00 34.79 4.02
227 242 0.830444 AGGCAGGTCTTACGTGGTCA 60.830 55.000 0.00 0.00 34.79 4.02
228 243 0.249398 GGCAGGTCTTACGTGGTCAT 59.751 55.000 0.00 0.00 34.79 3.06
229 244 1.359848 GCAGGTCTTACGTGGTCATG 58.640 55.000 0.00 0.00 34.79 3.07
230 245 2.007049 GCAGGTCTTACGTGGTCATGG 61.007 57.143 0.00 0.00 34.79 3.66
231 246 0.902531 AGGTCTTACGTGGTCATGGG 59.097 55.000 0.00 0.00 0.00 4.00
232 247 0.899720 GGTCTTACGTGGTCATGGGA 59.100 55.000 0.00 0.00 0.00 4.37
233 248 1.485066 GGTCTTACGTGGTCATGGGAT 59.515 52.381 0.00 0.00 0.00 3.85
234 249 2.483188 GGTCTTACGTGGTCATGGGATC 60.483 54.545 0.00 0.00 0.00 3.36
235 250 1.407618 TCTTACGTGGTCATGGGATCG 59.592 52.381 0.00 0.00 0.00 3.69
236 251 0.179094 TTACGTGGTCATGGGATCGC 60.179 55.000 0.00 2.14 0.00 4.58
238 253 2.186903 GTGGTCATGGGATCGCGT 59.813 61.111 5.77 1.41 0.00 6.01
239 254 2.173669 GTGGTCATGGGATCGCGTG 61.174 63.158 22.54 22.54 0.00 5.34
240 255 2.355193 TGGTCATGGGATCGCGTGA 61.355 57.895 25.98 25.98 0.00 4.35
241 256 1.069765 GGTCATGGGATCGCGTGAT 59.930 57.895 30.40 12.10 37.60 3.06
242 257 1.224069 GGTCATGGGATCGCGTGATG 61.224 60.000 30.40 17.20 34.09 3.07
243 258 0.530650 GTCATGGGATCGCGTGATGT 60.531 55.000 30.40 0.00 34.09 3.06
244 259 0.177836 TCATGGGATCGCGTGATGTT 59.822 50.000 25.98 0.00 34.09 2.71
245 260 1.016627 CATGGGATCGCGTGATGTTT 58.983 50.000 23.81 0.00 34.09 2.83
246 261 1.401552 CATGGGATCGCGTGATGTTTT 59.598 47.619 23.81 0.00 34.09 2.43
247 262 1.529226 TGGGATCGCGTGATGTTTTT 58.471 45.000 17.73 0.00 34.09 1.94
278 293 3.339253 GGATACTGTACGGTTTGGGTT 57.661 47.619 13.66 0.00 0.00 4.11
279 294 4.470334 GGATACTGTACGGTTTGGGTTA 57.530 45.455 13.66 0.00 0.00 2.85
280 295 5.027293 GGATACTGTACGGTTTGGGTTAT 57.973 43.478 13.66 0.00 0.00 1.89
281 296 6.160576 GGATACTGTACGGTTTGGGTTATA 57.839 41.667 13.66 0.00 0.00 0.98
282 297 5.985530 GGATACTGTACGGTTTGGGTTATAC 59.014 44.000 13.66 0.00 0.00 1.47
283 298 4.888326 ACTGTACGGTTTGGGTTATACA 57.112 40.909 0.04 0.00 0.00 2.29
284 299 4.824289 ACTGTACGGTTTGGGTTATACAG 58.176 43.478 0.04 7.49 43.26 2.74
285 300 4.186159 CTGTACGGTTTGGGTTATACAGG 58.814 47.826 0.00 0.00 37.13 4.00
286 301 2.793288 ACGGTTTGGGTTATACAGGG 57.207 50.000 0.00 0.00 0.00 4.45
287 302 1.340308 ACGGTTTGGGTTATACAGGGC 60.340 52.381 0.00 0.00 0.00 5.19
288 303 1.064979 CGGTTTGGGTTATACAGGGCT 60.065 52.381 0.00 0.00 0.00 5.19
289 304 2.171027 CGGTTTGGGTTATACAGGGCTA 59.829 50.000 0.00 0.00 0.00 3.93
290 305 3.743269 CGGTTTGGGTTATACAGGGCTAG 60.743 52.174 0.00 0.00 0.00 3.42
291 306 3.457012 GGTTTGGGTTATACAGGGCTAGA 59.543 47.826 0.00 0.00 0.00 2.43
292 307 4.449131 GTTTGGGTTATACAGGGCTAGAC 58.551 47.826 0.00 0.00 0.00 2.59
293 308 3.408157 TGGGTTATACAGGGCTAGACA 57.592 47.619 0.00 0.00 0.00 3.41
294 309 3.305720 TGGGTTATACAGGGCTAGACAG 58.694 50.000 0.00 0.00 0.00 3.51
295 310 2.633481 GGGTTATACAGGGCTAGACAGG 59.367 54.545 0.00 0.00 0.00 4.00
296 311 2.633481 GGTTATACAGGGCTAGACAGGG 59.367 54.545 0.00 0.00 0.00 4.45
297 312 2.011122 TATACAGGGCTAGACAGGGC 57.989 55.000 0.00 0.00 0.00 5.19
298 313 0.266152 ATACAGGGCTAGACAGGGCT 59.734 55.000 0.00 0.00 0.00 5.19
299 314 0.042731 TACAGGGCTAGACAGGGCTT 59.957 55.000 0.00 0.00 0.00 4.35
300 315 1.222936 CAGGGCTAGACAGGGCTTG 59.777 63.158 0.00 0.00 0.00 4.01
301 316 1.997874 AGGGCTAGACAGGGCTTGG 60.998 63.158 0.00 0.00 0.00 3.61
302 317 1.995626 GGGCTAGACAGGGCTTGGA 60.996 63.158 0.00 0.00 0.00 3.53
303 318 1.348775 GGGCTAGACAGGGCTTGGAT 61.349 60.000 0.00 0.00 0.00 3.41
304 319 0.107643 GGCTAGACAGGGCTTGGATC 59.892 60.000 0.44 0.00 0.00 3.36
305 320 1.127343 GCTAGACAGGGCTTGGATCT 58.873 55.000 0.44 0.00 0.00 2.75
306 321 1.202627 GCTAGACAGGGCTTGGATCTG 60.203 57.143 0.44 0.00 34.91 2.90
307 322 1.415659 CTAGACAGGGCTTGGATCTGG 59.584 57.143 0.44 0.00 33.19 3.86
308 323 0.252881 AGACAGGGCTTGGATCTGGA 60.253 55.000 0.44 0.00 33.19 3.86
309 324 0.107459 GACAGGGCTTGGATCTGGAC 60.107 60.000 0.44 0.00 33.19 4.02
310 325 0.548682 ACAGGGCTTGGATCTGGACT 60.549 55.000 0.44 0.00 33.19 3.85
311 326 1.273838 ACAGGGCTTGGATCTGGACTA 60.274 52.381 0.44 0.00 33.19 2.59
312 327 1.139853 CAGGGCTTGGATCTGGACTAC 59.860 57.143 0.00 0.00 0.00 2.73
313 328 0.105039 GGGCTTGGATCTGGACTACG 59.895 60.000 0.00 0.00 0.00 3.51
314 329 1.112113 GGCTTGGATCTGGACTACGA 58.888 55.000 0.00 0.00 0.00 3.43
315 330 1.202428 GGCTTGGATCTGGACTACGAC 60.202 57.143 0.00 0.00 0.00 4.34
316 331 1.534175 GCTTGGATCTGGACTACGACG 60.534 57.143 0.00 0.00 0.00 5.12
317 332 1.065701 CTTGGATCTGGACTACGACGG 59.934 57.143 0.00 0.00 0.00 4.79
318 333 0.750546 TGGATCTGGACTACGACGGG 60.751 60.000 0.00 0.00 0.00 5.28
319 334 1.359475 GATCTGGACTACGACGGGC 59.641 63.158 0.00 0.00 0.00 6.13
320 335 2.073037 GATCTGGACTACGACGGGCC 62.073 65.000 0.00 0.00 0.00 5.80
321 336 2.849096 ATCTGGACTACGACGGGCCA 62.849 60.000 4.39 0.00 0.00 5.36
322 337 3.064987 CTGGACTACGACGGGCCAG 62.065 68.421 11.04 11.04 40.03 4.85
323 338 3.834799 GGACTACGACGGGCCAGG 61.835 72.222 8.08 0.00 0.00 4.45
324 339 2.753043 GACTACGACGGGCCAGGA 60.753 66.667 8.08 0.00 0.00 3.86
325 340 2.043248 ACTACGACGGGCCAGGAT 60.043 61.111 8.08 0.00 0.00 3.24
326 341 0.820891 GACTACGACGGGCCAGGATA 60.821 60.000 8.08 0.00 0.00 2.59
327 342 0.396139 ACTACGACGGGCCAGGATAA 60.396 55.000 8.08 0.00 0.00 1.75
328 343 0.748450 CTACGACGGGCCAGGATAAA 59.252 55.000 8.08 0.00 0.00 1.40
329 344 1.137479 CTACGACGGGCCAGGATAAAA 59.863 52.381 8.08 0.00 0.00 1.52
330 345 0.325602 ACGACGGGCCAGGATAAAAA 59.674 50.000 8.08 0.00 0.00 1.94
350 365 6.844097 AAAAACAAACTCACAGGGACTAAA 57.156 33.333 0.00 0.00 36.02 1.85
351 366 6.844097 AAAACAAACTCACAGGGACTAAAA 57.156 33.333 0.00 0.00 36.02 1.52
352 367 7.418337 AAAACAAACTCACAGGGACTAAAAT 57.582 32.000 0.00 0.00 36.02 1.82
353 368 8.528044 AAAACAAACTCACAGGGACTAAAATA 57.472 30.769 0.00 0.00 36.02 1.40
354 369 7.506328 AACAAACTCACAGGGACTAAAATAC 57.494 36.000 0.00 0.00 36.02 1.89
355 370 6.002082 ACAAACTCACAGGGACTAAAATACC 58.998 40.000 0.00 0.00 36.02 2.73
356 371 4.838904 ACTCACAGGGACTAAAATACCC 57.161 45.455 0.00 0.00 43.55 3.69
357 372 3.522343 ACTCACAGGGACTAAAATACCCC 59.478 47.826 0.00 0.00 44.21 4.95
359 374 3.778629 TCACAGGGACTAAAATACCCCTC 59.221 47.826 0.00 0.00 45.69 4.30
360 375 2.770232 ACAGGGACTAAAATACCCCTCG 59.230 50.000 0.00 0.00 45.69 4.63
361 376 3.036091 CAGGGACTAAAATACCCCTCGA 58.964 50.000 0.00 0.00 45.69 4.04
362 377 3.453353 CAGGGACTAAAATACCCCTCGAA 59.547 47.826 0.00 0.00 45.69 3.71
363 378 4.080751 CAGGGACTAAAATACCCCTCGAAA 60.081 45.833 0.00 0.00 45.69 3.46
364 379 4.537288 AGGGACTAAAATACCCCTCGAAAA 59.463 41.667 0.00 0.00 45.69 2.29
365 380 5.193124 AGGGACTAAAATACCCCTCGAAAAT 59.807 40.000 0.00 0.00 45.69 1.82
366 381 5.889853 GGGACTAAAATACCCCTCGAAAATT 59.110 40.000 0.00 0.00 37.85 1.82
367 382 7.056006 GGGACTAAAATACCCCTCGAAAATTA 58.944 38.462 0.00 0.00 37.85 1.40
368 383 7.228108 GGGACTAAAATACCCCTCGAAAATTAG 59.772 40.741 0.00 0.00 37.85 1.73
369 384 7.228108 GGACTAAAATACCCCTCGAAAATTAGG 59.772 40.741 0.00 0.00 0.00 2.69
370 385 7.636579 ACTAAAATACCCCTCGAAAATTAGGT 58.363 34.615 0.00 0.00 0.00 3.08
371 386 8.111545 ACTAAAATACCCCTCGAAAATTAGGTT 58.888 33.333 0.00 0.00 0.00 3.50
372 387 9.617523 CTAAAATACCCCTCGAAAATTAGGTTA 57.382 33.333 0.00 0.00 0.00 2.85
373 388 8.515695 AAAATACCCCTCGAAAATTAGGTTAG 57.484 34.615 0.00 0.00 0.00 2.34
374 389 4.498894 ACCCCTCGAAAATTAGGTTAGG 57.501 45.455 0.00 0.00 0.00 2.69
375 390 3.201487 ACCCCTCGAAAATTAGGTTAGGG 59.799 47.826 0.00 0.00 41.62 3.53
376 391 3.816994 CCCTCGAAAATTAGGTTAGGGG 58.183 50.000 0.00 0.00 38.84 4.79
377 392 3.457012 CCCTCGAAAATTAGGTTAGGGGA 59.543 47.826 0.00 0.00 38.84 4.81
378 393 4.444449 CCCTCGAAAATTAGGTTAGGGGAG 60.444 50.000 0.00 0.00 38.84 4.30
379 394 4.127907 CTCGAAAATTAGGTTAGGGGAGC 58.872 47.826 0.00 0.00 0.00 4.70
380 395 3.520317 TCGAAAATTAGGTTAGGGGAGCA 59.480 43.478 0.00 0.00 0.00 4.26
381 396 3.626217 CGAAAATTAGGTTAGGGGAGCAC 59.374 47.826 0.00 0.00 0.00 4.40
382 397 3.664551 AAATTAGGTTAGGGGAGCACC 57.335 47.619 0.00 0.00 39.11 5.01
383 398 1.129058 ATTAGGTTAGGGGAGCACCG 58.871 55.000 0.00 0.00 41.60 4.94
384 399 0.979187 TTAGGTTAGGGGAGCACCGG 60.979 60.000 0.00 0.00 41.60 5.28
385 400 1.877672 TAGGTTAGGGGAGCACCGGA 61.878 60.000 9.46 0.00 41.60 5.14
386 401 2.732619 GGTTAGGGGAGCACCGGAG 61.733 68.421 9.46 0.00 41.60 4.63
387 402 3.081409 TTAGGGGAGCACCGGAGC 61.081 66.667 16.88 16.88 41.60 4.70
388 403 3.916438 TTAGGGGAGCACCGGAGCA 62.916 63.158 26.04 0.38 41.60 4.26
439 454 1.528309 CCACAAACCTTGGCCGACT 60.528 57.895 0.00 0.00 34.12 4.18
577 646 3.202906 TGCATCTAATTTCTACGGTGCC 58.797 45.455 0.00 0.00 0.00 5.01
700 941 3.853671 GCTTAATGTGATGTTTCGCCAAG 59.146 43.478 0.00 0.00 0.00 3.61
747 1000 3.170991 TGGTCTACTAGTGGAGCAACT 57.829 47.619 31.27 0.00 43.72 3.16
786 1045 5.786401 ACAAATTCTTCTACGTCATCAGC 57.214 39.130 0.00 0.00 0.00 4.26
951 4437 2.763448 AGTCCAGACAATAGAGGCAGTC 59.237 50.000 0.00 0.00 0.00 3.51
999 4500 2.032808 GGCAAATTAAGCTCGTCGATCC 60.033 50.000 0.00 0.00 0.00 3.36
1008 4509 0.826256 CTCGTCGATCCATGGGGGTA 60.826 60.000 13.02 0.00 38.11 3.69
1234 4735 1.595357 GGGTCTTCCTGTACCGGTG 59.405 63.158 19.93 0.00 36.57 4.94
1302 4809 1.739338 GATCAGTCCAGCCCGACGAT 61.739 60.000 0.00 7.39 37.85 3.73
1318 4843 1.883084 GATCGGGATCGTGTGGTGC 60.883 63.158 0.00 0.00 37.69 5.01
1323 4848 1.594833 GGATCGTGTGGTGCTGGTA 59.405 57.895 0.00 0.00 0.00 3.25
1466 5004 2.046217 GGCCGGTGGAGAGGAAAC 60.046 66.667 1.90 0.00 0.00 2.78
1488 5041 2.018515 GTACGTCAAGAGGAGGAGGAG 58.981 57.143 0.00 0.00 35.40 3.69
1491 5044 1.617263 CGTCAAGAGGAGGAGGAGGAA 60.617 57.143 0.00 0.00 33.18 3.36
1492 5045 2.107366 GTCAAGAGGAGGAGGAGGAAG 58.893 57.143 0.00 0.00 0.00 3.46
1493 5046 2.003830 TCAAGAGGAGGAGGAGGAAGA 58.996 52.381 0.00 0.00 0.00 2.87
1726 5341 1.068748 TCTTTACTCCACGCGTCTGTC 60.069 52.381 9.86 0.00 0.00 3.51
1743 5366 4.760715 GTCTGTCACGATAGGCTTAGGATA 59.239 45.833 0.00 0.00 43.77 2.59
1746 5369 6.493802 TCTGTCACGATAGGCTTAGGATATTT 59.506 38.462 0.00 0.00 43.77 1.40
1893 5797 1.336440 TGAATGTTGGTGGCAAAGTCG 59.664 47.619 0.00 0.00 0.00 4.18
1945 5851 5.132897 CTTCTTCACACTCTAGAAGCACT 57.867 43.478 0.00 0.00 40.72 4.40
1975 5881 1.509463 GGTGACGTACATGGAGCGA 59.491 57.895 11.65 0.00 0.00 4.93
2038 5957 0.966920 ACGTGTCACCGAGAAGGATT 59.033 50.000 0.00 0.00 45.00 3.01
2104 6038 4.274950 CGTTAAAACTCCACCACAAGTCAT 59.725 41.667 0.00 0.00 0.00 3.06
2113 6047 3.448686 CACCACAAGTCATATCGAGTCC 58.551 50.000 0.00 0.00 0.00 3.85
2120 6054 2.952978 AGTCATATCGAGTCCTGTCCAC 59.047 50.000 0.00 0.00 0.00 4.02
2129 6063 2.358247 CCTGTCCACGAAACCCGG 60.358 66.667 0.00 0.00 43.93 5.73
2132 6066 2.359478 GTCCACGAAACCCGGCAT 60.359 61.111 0.00 0.00 43.93 4.40
2190 6129 4.179579 GCGGCGGTGGAATCTTGC 62.180 66.667 9.78 0.00 0.00 4.01
2191 6130 2.745884 CGGCGGTGGAATCTTGCA 60.746 61.111 0.00 0.00 0.00 4.08
2235 6176 1.522355 CGAACTCCATGCCGATGCT 60.522 57.895 0.00 0.00 38.71 3.79
2239 6180 1.337384 ACTCCATGCCGATGCTGGTA 61.337 55.000 0.00 0.00 37.20 3.25
2287 6228 1.480954 ACCTGCGTGTTGGTATAGAGG 59.519 52.381 0.00 0.00 34.36 3.69
2309 6250 7.498239 AGAGGAGTGTGTTTAGTTTAGGTTTTC 59.502 37.037 0.00 0.00 0.00 2.29
2369 6310 8.429237 AAATTAACACCATCTTTACCATTCCA 57.571 30.769 0.00 0.00 0.00 3.53
2370 6311 8.429237 AATTAACACCATCTTTACCATTCCAA 57.571 30.769 0.00 0.00 0.00 3.53
2371 6312 5.722021 AACACCATCTTTACCATTCCAAC 57.278 39.130 0.00 0.00 0.00 3.77
2372 6313 4.735369 ACACCATCTTTACCATTCCAACA 58.265 39.130 0.00 0.00 0.00 3.33
2373 6314 4.522789 ACACCATCTTTACCATTCCAACAC 59.477 41.667 0.00 0.00 0.00 3.32
2374 6315 3.756434 ACCATCTTTACCATTCCAACACG 59.244 43.478 0.00 0.00 0.00 4.49
2375 6316 3.128589 CCATCTTTACCATTCCAACACGG 59.871 47.826 0.00 0.00 0.00 4.94
2376 6317 3.773418 TCTTTACCATTCCAACACGGA 57.227 42.857 0.00 0.00 44.40 4.69
2377 6318 3.404899 TCTTTACCATTCCAACACGGAC 58.595 45.455 0.00 0.00 46.36 4.79
2378 6319 2.188062 TTACCATTCCAACACGGACC 57.812 50.000 0.00 0.00 46.36 4.46
2379 6320 0.325602 TACCATTCCAACACGGACCC 59.674 55.000 0.00 0.00 46.36 4.46
2380 6321 1.074072 CCATTCCAACACGGACCCA 59.926 57.895 0.00 0.00 46.36 4.51
2381 6322 1.241315 CCATTCCAACACGGACCCAC 61.241 60.000 0.00 0.00 46.36 4.61
2382 6323 0.536233 CATTCCAACACGGACCCACA 60.536 55.000 0.00 0.00 46.36 4.17
2383 6324 0.183971 ATTCCAACACGGACCCACAA 59.816 50.000 0.00 0.00 46.36 3.33
2384 6325 0.034380 TTCCAACACGGACCCACAAA 60.034 50.000 0.00 0.00 46.36 2.83
2385 6326 0.748729 TCCAACACGGACCCACAAAC 60.749 55.000 0.00 0.00 39.64 2.93
2386 6327 1.730451 CCAACACGGACCCACAAACC 61.730 60.000 0.00 0.00 36.56 3.27
2387 6328 1.032657 CAACACGGACCCACAAACCA 61.033 55.000 0.00 0.00 0.00 3.67
2388 6329 0.106419 AACACGGACCCACAAACCAT 60.106 50.000 0.00 0.00 0.00 3.55
2389 6330 0.106419 ACACGGACCCACAAACCATT 60.106 50.000 0.00 0.00 0.00 3.16
2390 6331 0.596082 CACGGACCCACAAACCATTC 59.404 55.000 0.00 0.00 0.00 2.67
2391 6332 0.183971 ACGGACCCACAAACCATTCA 59.816 50.000 0.00 0.00 0.00 2.57
2392 6333 1.203001 ACGGACCCACAAACCATTCAT 60.203 47.619 0.00 0.00 0.00 2.57
2393 6334 1.202114 CGGACCCACAAACCATTCATG 59.798 52.381 0.00 0.00 0.00 3.07
2394 6335 2.524306 GGACCCACAAACCATTCATGA 58.476 47.619 0.00 0.00 0.00 3.07
2395 6336 3.099141 GGACCCACAAACCATTCATGAT 58.901 45.455 0.00 0.00 0.00 2.45
2396 6337 3.131046 GGACCCACAAACCATTCATGATC 59.869 47.826 0.00 0.00 0.00 2.92
2397 6338 3.099141 ACCCACAAACCATTCATGATCC 58.901 45.455 0.00 0.00 0.00 3.36
2398 6339 3.245730 ACCCACAAACCATTCATGATCCT 60.246 43.478 0.00 0.00 0.00 3.24
2399 6340 3.382546 CCCACAAACCATTCATGATCCTC 59.617 47.826 0.00 0.00 0.00 3.71
2400 6341 3.382546 CCACAAACCATTCATGATCCTCC 59.617 47.826 0.00 0.00 0.00 4.30
2401 6342 3.065786 CACAAACCATTCATGATCCTCCG 59.934 47.826 0.00 0.00 0.00 4.63
2402 6343 2.620115 CAAACCATTCATGATCCTCCGG 59.380 50.000 0.00 0.00 0.00 5.14
2403 6344 1.806496 ACCATTCATGATCCTCCGGA 58.194 50.000 2.93 2.93 35.55 5.14
2404 6345 2.342659 ACCATTCATGATCCTCCGGAT 58.657 47.619 3.57 0.00 46.28 4.18
2411 6352 3.063526 ATCCTCCGGATCGCATGG 58.936 61.111 3.57 0.61 38.09 3.66
2412 6353 1.838846 ATCCTCCGGATCGCATGGT 60.839 57.895 3.57 0.00 38.09 3.55
2413 6354 1.410850 ATCCTCCGGATCGCATGGTT 61.411 55.000 3.57 0.00 38.09 3.67
2414 6355 1.595382 CCTCCGGATCGCATGGTTC 60.595 63.158 3.57 0.00 0.00 3.62
2415 6356 1.951130 CTCCGGATCGCATGGTTCG 60.951 63.158 3.57 0.00 0.00 3.95
2416 6357 2.967076 CCGGATCGCATGGTTCGG 60.967 66.667 0.00 0.00 0.00 4.30
2417 6358 2.106131 CGGATCGCATGGTTCGGA 59.894 61.111 0.00 0.00 0.00 4.55
2418 6359 2.237751 CGGATCGCATGGTTCGGAC 61.238 63.158 0.00 0.00 0.00 4.79
2419 6360 1.153449 GGATCGCATGGTTCGGACA 60.153 57.895 0.00 0.00 0.00 4.02
2420 6361 0.532862 GGATCGCATGGTTCGGACAT 60.533 55.000 0.00 0.00 0.00 3.06
2421 6362 0.583438 GATCGCATGGTTCGGACATG 59.417 55.000 0.00 3.40 46.45 3.21
2422 6363 0.107703 ATCGCATGGTTCGGACATGT 60.108 50.000 0.00 0.00 45.68 3.21
2423 6364 0.321210 TCGCATGGTTCGGACATGTT 60.321 50.000 0.00 0.00 45.68 2.71
2424 6365 0.521291 CGCATGGTTCGGACATGTTT 59.479 50.000 0.00 0.00 45.68 2.83
2425 6366 1.068610 CGCATGGTTCGGACATGTTTT 60.069 47.619 0.00 0.00 45.68 2.43
2426 6367 2.327568 GCATGGTTCGGACATGTTTTG 58.672 47.619 0.00 0.00 45.68 2.44
2427 6368 2.327568 CATGGTTCGGACATGTTTTGC 58.672 47.619 0.00 0.00 40.54 3.68
2428 6369 0.671251 TGGTTCGGACATGTTTTGCC 59.329 50.000 0.00 0.00 0.00 4.52
2429 6370 0.671251 GGTTCGGACATGTTTTGCCA 59.329 50.000 0.00 0.00 0.00 4.92
2430 6371 1.272212 GGTTCGGACATGTTTTGCCAT 59.728 47.619 0.00 0.00 0.00 4.40
2431 6372 2.595386 GTTCGGACATGTTTTGCCATC 58.405 47.619 0.00 0.00 0.00 3.51
2432 6373 1.173043 TCGGACATGTTTTGCCATCC 58.827 50.000 0.00 0.00 0.00 3.51
2433 6374 0.887247 CGGACATGTTTTGCCATCCA 59.113 50.000 0.00 0.00 0.00 3.41
2434 6375 1.135315 CGGACATGTTTTGCCATCCAG 60.135 52.381 0.00 0.00 0.00 3.86
2435 6376 1.404583 GGACATGTTTTGCCATCCAGC 60.405 52.381 0.00 0.00 0.00 4.85
2436 6377 0.244450 ACATGTTTTGCCATCCAGCG 59.756 50.000 0.00 0.00 34.65 5.18
2437 6378 1.079875 CATGTTTTGCCATCCAGCGC 61.080 55.000 0.00 0.00 34.65 5.92
2438 6379 2.504681 GTTTTGCCATCCAGCGCG 60.505 61.111 0.00 0.00 34.65 6.86
2439 6380 3.746889 TTTTGCCATCCAGCGCGG 61.747 61.111 8.83 11.37 34.65 6.46
2444 6385 3.274586 CCATCCAGCGCGGTCATG 61.275 66.667 8.38 13.68 35.57 3.07
2445 6386 2.512286 CATCCAGCGCGGTCATGT 60.512 61.111 8.38 0.00 35.57 3.21
2446 6387 1.227234 CATCCAGCGCGGTCATGTA 60.227 57.895 8.38 0.00 35.57 2.29
2447 6388 0.601046 CATCCAGCGCGGTCATGTAT 60.601 55.000 8.38 0.00 35.57 2.29
2448 6389 0.319900 ATCCAGCGCGGTCATGTATC 60.320 55.000 8.38 0.00 35.57 2.24
2449 6390 2.302952 CCAGCGCGGTCATGTATCG 61.303 63.158 8.38 0.00 33.70 2.92
2450 6391 1.299089 CAGCGCGGTCATGTATCGA 60.299 57.895 8.38 0.00 31.47 3.59
2451 6392 0.664466 CAGCGCGGTCATGTATCGAT 60.664 55.000 8.38 2.16 31.47 3.59
2452 6393 0.387367 AGCGCGGTCATGTATCGATC 60.387 55.000 4.23 0.00 31.47 3.69
2453 6394 1.344942 GCGCGGTCATGTATCGATCC 61.345 60.000 8.83 0.00 31.47 3.36
2454 6395 1.065572 CGCGGTCATGTATCGATCCG 61.066 60.000 14.67 14.67 40.72 4.18
2455 6396 2.725644 CGGTCATGTATCGATCCGC 58.274 57.895 0.00 0.00 31.47 5.54
2456 6397 0.241213 CGGTCATGTATCGATCCGCT 59.759 55.000 0.00 0.00 31.47 5.52
2457 6398 1.729472 CGGTCATGTATCGATCCGCTC 60.729 57.143 0.00 0.00 31.47 5.03
2465 6406 4.570663 CGATCCGCTCGGTGGTCC 62.571 72.222 8.28 0.00 43.82 4.46
2476 6417 4.974989 GTGGTCCGGGCGTCGTTT 62.975 66.667 0.00 0.00 37.11 3.60
2477 6418 4.238654 TGGTCCGGGCGTCGTTTT 62.239 61.111 0.00 0.00 37.11 2.43
2478 6419 2.974148 GGTCCGGGCGTCGTTTTT 60.974 61.111 0.00 0.00 37.11 1.94
2479 6420 2.552768 GTCCGGGCGTCGTTTTTC 59.447 61.111 0.00 0.00 37.11 2.29
2480 6421 1.957695 GTCCGGGCGTCGTTTTTCT 60.958 57.895 0.00 0.00 37.11 2.52
2481 6422 1.665599 TCCGGGCGTCGTTTTTCTC 60.666 57.895 0.00 0.00 37.11 2.87
2482 6423 2.468532 CGGGCGTCGTTTTTCTCG 59.531 61.111 0.00 0.00 0.00 4.04
2483 6424 2.172659 GGGCGTCGTTTTTCTCGC 59.827 61.111 0.00 0.00 46.42 5.03
2485 6426 4.884901 GCGTCGTTTTTCTCGCAA 57.115 50.000 0.00 0.00 46.40 4.85
2486 6427 3.136800 GCGTCGTTTTTCTCGCAAA 57.863 47.368 0.00 0.00 46.40 3.68
2487 6428 0.762504 GCGTCGTTTTTCTCGCAAAC 59.237 50.000 0.00 0.00 46.40 2.93
2488 6429 1.593793 GCGTCGTTTTTCTCGCAAACT 60.594 47.619 0.00 0.00 46.40 2.66
2489 6430 2.026990 CGTCGTTTTTCTCGCAAACTG 58.973 47.619 0.00 0.00 32.79 3.16
2490 6431 2.372350 GTCGTTTTTCTCGCAAACTGG 58.628 47.619 0.00 0.00 32.79 4.00
2491 6432 2.031191 GTCGTTTTTCTCGCAAACTGGA 59.969 45.455 0.00 0.00 32.79 3.86
2492 6433 2.678836 TCGTTTTTCTCGCAAACTGGAA 59.321 40.909 0.00 0.00 32.79 3.53
2493 6434 3.035942 CGTTTTTCTCGCAAACTGGAAG 58.964 45.455 0.00 0.00 42.29 3.46
2494 6435 3.372060 GTTTTTCTCGCAAACTGGAAGG 58.628 45.455 0.00 0.00 39.30 3.46
2495 6436 2.631160 TTTCTCGCAAACTGGAAGGA 57.369 45.000 0.00 0.00 39.30 3.36
2496 6437 2.169832 TTCTCGCAAACTGGAAGGAG 57.830 50.000 0.00 0.00 39.30 3.69
2497 6438 0.321671 TCTCGCAAACTGGAAGGAGG 59.678 55.000 0.00 0.00 39.30 4.30
2498 6439 0.674895 CTCGCAAACTGGAAGGAGGG 60.675 60.000 0.00 0.00 39.30 4.30
2499 6440 1.675641 CGCAAACTGGAAGGAGGGG 60.676 63.158 0.00 0.00 39.30 4.79
2500 6441 1.304464 GCAAACTGGAAGGAGGGGG 60.304 63.158 0.00 0.00 39.30 5.40
2501 6442 1.789576 GCAAACTGGAAGGAGGGGGA 61.790 60.000 0.00 0.00 39.30 4.81
2502 6443 0.329596 CAAACTGGAAGGAGGGGGAG 59.670 60.000 0.00 0.00 39.30 4.30
2503 6444 0.846870 AAACTGGAAGGAGGGGGAGG 60.847 60.000 0.00 0.00 39.30 4.30
2504 6445 2.367512 CTGGAAGGAGGGGGAGGG 60.368 72.222 0.00 0.00 0.00 4.30
2505 6446 4.038804 TGGAAGGAGGGGGAGGGG 62.039 72.222 0.00 0.00 0.00 4.79
2506 6447 4.845307 GGAAGGAGGGGGAGGGGG 62.845 77.778 0.00 0.00 0.00 5.40
2520 6461 4.423231 GGGGGAGGTCTTTGCAAG 57.577 61.111 0.00 0.00 0.00 4.01
2521 6462 1.979155 GGGGGAGGTCTTTGCAAGC 60.979 63.158 0.00 0.00 0.00 4.01
2522 6463 2.335712 GGGGAGGTCTTTGCAAGCG 61.336 63.158 0.00 0.00 0.00 4.68
2523 6464 1.600916 GGGAGGTCTTTGCAAGCGT 60.601 57.895 0.00 0.00 0.00 5.07
2524 6465 1.578206 GGGAGGTCTTTGCAAGCGTC 61.578 60.000 0.00 5.68 0.00 5.19
2525 6466 1.578206 GGAGGTCTTTGCAAGCGTCC 61.578 60.000 17.37 17.37 34.76 4.79
2526 6467 0.884704 GAGGTCTTTGCAAGCGTCCA 60.885 55.000 0.00 0.00 0.00 4.02
2527 6468 0.465460 AGGTCTTTGCAAGCGTCCAA 60.465 50.000 0.00 0.00 0.00 3.53
2528 6469 0.383949 GGTCTTTGCAAGCGTCCAAA 59.616 50.000 0.00 0.00 0.00 3.28
2529 6470 1.477105 GTCTTTGCAAGCGTCCAAAC 58.523 50.000 0.00 0.00 0.00 2.93
2530 6471 1.065551 GTCTTTGCAAGCGTCCAAACT 59.934 47.619 0.00 0.00 0.00 2.66
2531 6472 1.065401 TCTTTGCAAGCGTCCAAACTG 59.935 47.619 0.00 0.00 0.00 3.16
2532 6473 0.527385 TTTGCAAGCGTCCAAACTGC 60.527 50.000 0.00 0.00 0.00 4.40
2533 6474 1.383456 TTGCAAGCGTCCAAACTGCT 61.383 50.000 0.00 0.00 37.02 4.24
2534 6475 1.370900 GCAAGCGTCCAAACTGCTG 60.371 57.895 0.00 0.00 36.09 4.41
2535 6476 2.024918 CAAGCGTCCAAACTGCTGT 58.975 52.632 0.00 0.00 36.09 4.40
2536 6477 0.040958 CAAGCGTCCAAACTGCTGTC 60.041 55.000 0.00 0.00 36.09 3.51
2537 6478 0.463654 AAGCGTCCAAACTGCTGTCA 60.464 50.000 0.00 0.00 36.09 3.58
2538 6479 0.250467 AGCGTCCAAACTGCTGTCAT 60.250 50.000 0.00 0.00 35.14 3.06
2539 6480 0.110056 GCGTCCAAACTGCTGTCATG 60.110 55.000 0.00 0.00 0.00 3.07
2540 6481 0.110056 CGTCCAAACTGCTGTCATGC 60.110 55.000 0.00 0.00 0.00 4.06
2541 6482 0.953727 GTCCAAACTGCTGTCATGCA 59.046 50.000 0.00 0.00 41.05 3.96
2542 6483 0.953727 TCCAAACTGCTGTCATGCAC 59.046 50.000 0.00 0.00 38.12 4.57
2543 6484 0.669619 CCAAACTGCTGTCATGCACA 59.330 50.000 0.00 0.00 38.12 4.57
2544 6485 1.601162 CCAAACTGCTGTCATGCACAC 60.601 52.381 0.00 0.00 38.12 3.82
2545 6486 1.065851 CAAACTGCTGTCATGCACACA 59.934 47.619 0.00 0.00 38.12 3.72
2546 6487 1.612676 AACTGCTGTCATGCACACAT 58.387 45.000 0.00 0.00 38.12 3.21
2547 6488 1.162698 ACTGCTGTCATGCACACATC 58.837 50.000 0.86 0.00 38.12 3.06
2548 6489 1.271217 ACTGCTGTCATGCACACATCT 60.271 47.619 0.86 0.00 38.12 2.90
2549 6490 1.130561 CTGCTGTCATGCACACATCTG 59.869 52.381 0.86 0.00 38.12 2.90
2550 6491 0.450583 GCTGTCATGCACACATCTGG 59.549 55.000 0.86 0.00 32.87 3.86
2551 6492 1.947212 GCTGTCATGCACACATCTGGA 60.947 52.381 0.86 0.00 32.87 3.86
2552 6493 2.640184 CTGTCATGCACACATCTGGAT 58.360 47.619 0.86 0.00 32.87 3.41
2553 6494 3.800531 CTGTCATGCACACATCTGGATA 58.199 45.455 0.86 0.00 32.87 2.59
2554 6495 3.534554 TGTCATGCACACATCTGGATAC 58.465 45.455 0.00 0.00 32.87 2.24
2555 6496 2.874701 GTCATGCACACATCTGGATACC 59.125 50.000 0.00 0.00 32.87 2.73
2556 6497 2.158769 TCATGCACACATCTGGATACCC 60.159 50.000 0.00 0.00 32.87 3.69
2557 6498 0.177836 TGCACACATCTGGATACCCG 59.822 55.000 0.00 0.00 34.29 5.28
2558 6499 0.532862 GCACACATCTGGATACCCGG 60.533 60.000 0.00 0.00 40.31 5.73
2559 6500 0.106708 CACACATCTGGATACCCGGG 59.893 60.000 22.25 22.25 39.38 5.73
2560 6501 1.071471 CACATCTGGATACCCGGGC 59.929 63.158 24.08 4.22 39.38 6.13
2561 6502 2.147387 ACATCTGGATACCCGGGCC 61.147 63.158 24.08 15.35 39.38 5.80
2562 6503 2.529389 ATCTGGATACCCGGGCCC 60.529 66.667 24.08 20.16 39.38 5.80
2563 6504 3.420197 ATCTGGATACCCGGGCCCA 62.420 63.158 24.08 23.72 39.38 5.36
2564 6505 3.873812 CTGGATACCCGGGCCCAC 61.874 72.222 24.08 9.90 35.09 4.61
2565 6506 4.424867 TGGATACCCGGGCCCACT 62.425 66.667 24.08 2.16 34.29 4.00
2566 6507 3.557290 GGATACCCGGGCCCACTC 61.557 72.222 24.08 10.13 0.00 3.51
2567 6508 2.766651 GATACCCGGGCCCACTCA 60.767 66.667 24.08 3.73 0.00 3.41
2568 6509 2.285818 ATACCCGGGCCCACTCAA 60.286 61.111 24.08 2.45 0.00 3.02
2569 6510 1.917336 GATACCCGGGCCCACTCAAA 61.917 60.000 24.08 1.17 0.00 2.69
2570 6511 2.206182 ATACCCGGGCCCACTCAAAC 62.206 60.000 24.08 0.00 0.00 2.93
2571 6512 4.278513 CCCGGGCCCACTCAAACA 62.279 66.667 24.92 0.00 0.00 2.83
2572 6513 2.672996 CCGGGCCCACTCAAACAG 60.673 66.667 24.92 0.78 0.00 3.16
2573 6514 2.113139 CGGGCCCACTCAAACAGT 59.887 61.111 24.92 0.00 34.67 3.55
2574 6515 1.966451 CGGGCCCACTCAAACAGTC 60.966 63.158 24.92 0.00 30.26 3.51
2575 6516 1.456287 GGGCCCACTCAAACAGTCT 59.544 57.895 19.95 0.00 30.26 3.24
2576 6517 0.178990 GGGCCCACTCAAACAGTCTT 60.179 55.000 19.95 0.00 30.26 3.01
2577 6518 1.692411 GGCCCACTCAAACAGTCTTT 58.308 50.000 0.00 0.00 30.26 2.52
2578 6519 1.609072 GGCCCACTCAAACAGTCTTTC 59.391 52.381 0.00 0.00 30.26 2.62
2579 6520 2.576615 GCCCACTCAAACAGTCTTTCT 58.423 47.619 0.00 0.00 30.26 2.52
2580 6521 2.550180 GCCCACTCAAACAGTCTTTCTC 59.450 50.000 0.00 0.00 30.26 2.87
2581 6522 2.802816 CCCACTCAAACAGTCTTTCTCG 59.197 50.000 0.00 0.00 30.26 4.04
2582 6523 3.492656 CCCACTCAAACAGTCTTTCTCGA 60.493 47.826 0.00 0.00 30.26 4.04
2583 6524 3.491267 CCACTCAAACAGTCTTTCTCGAC 59.509 47.826 0.00 0.00 30.26 4.20
2584 6525 3.491267 CACTCAAACAGTCTTTCTCGACC 59.509 47.826 0.00 0.00 34.46 4.79
2585 6526 2.726760 CTCAAACAGTCTTTCTCGACCG 59.273 50.000 0.00 0.00 34.46 4.79
2586 6527 1.192534 CAAACAGTCTTTCTCGACCGC 59.807 52.381 0.00 0.00 34.46 5.68
2587 6528 0.387929 AACAGTCTTTCTCGACCGCA 59.612 50.000 0.00 0.00 34.46 5.69
2588 6529 0.603569 ACAGTCTTTCTCGACCGCAT 59.396 50.000 0.00 0.00 34.46 4.73
2589 6530 1.272781 CAGTCTTTCTCGACCGCATC 58.727 55.000 0.00 0.00 34.46 3.91
2590 6531 0.888619 AGTCTTTCTCGACCGCATCA 59.111 50.000 0.00 0.00 34.46 3.07
2591 6532 1.478510 AGTCTTTCTCGACCGCATCAT 59.521 47.619 0.00 0.00 34.46 2.45
2592 6533 2.093973 AGTCTTTCTCGACCGCATCATT 60.094 45.455 0.00 0.00 34.46 2.57
2593 6534 2.673368 GTCTTTCTCGACCGCATCATTT 59.327 45.455 0.00 0.00 0.00 2.32
2594 6535 2.930040 TCTTTCTCGACCGCATCATTTC 59.070 45.455 0.00 0.00 0.00 2.17
2595 6536 1.651987 TTCTCGACCGCATCATTTCC 58.348 50.000 0.00 0.00 0.00 3.13
2596 6537 0.179084 TCTCGACCGCATCATTTCCC 60.179 55.000 0.00 0.00 0.00 3.97
2597 6538 1.490693 CTCGACCGCATCATTTCCCG 61.491 60.000 0.00 0.00 0.00 5.14
2598 6539 2.715624 GACCGCATCATTTCCCGC 59.284 61.111 0.00 0.00 0.00 6.13
2599 6540 2.828549 ACCGCATCATTTCCCGCC 60.829 61.111 0.00 0.00 0.00 6.13
2600 6541 2.516930 CCGCATCATTTCCCGCCT 60.517 61.111 0.00 0.00 0.00 5.52
2601 6542 2.717485 CGCATCATTTCCCGCCTG 59.283 61.111 0.00 0.00 0.00 4.85
2602 6543 1.819208 CGCATCATTTCCCGCCTGA 60.819 57.895 0.00 0.00 0.00 3.86
2603 6544 1.375853 CGCATCATTTCCCGCCTGAA 61.376 55.000 0.00 0.00 0.00 3.02
2604 6545 0.383231 GCATCATTTCCCGCCTGAAG 59.617 55.000 0.00 0.00 0.00 3.02
2605 6546 2.018644 GCATCATTTCCCGCCTGAAGA 61.019 52.381 0.00 0.00 0.00 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 8.504005 GTCTCTAAAAATGGAATCTTTTCGACA 58.496 33.333 0.00 0.00 32.28 4.35
49 50 8.936864 GGAGAATGAACCCGAGTAATATTAATG 58.063 37.037 0.00 0.00 0.00 1.90
52 53 7.850935 AGGAGAATGAACCCGAGTAATATTA 57.149 36.000 0.00 0.00 0.00 0.98
58 59 5.021458 AGTTTAGGAGAATGAACCCGAGTA 58.979 41.667 0.00 0.00 0.00 2.59
60 61 4.473477 AGTTTAGGAGAATGAACCCGAG 57.527 45.455 0.00 0.00 0.00 4.63
68 69 7.281774 AGCATATGTGTCAAGTTTAGGAGAATG 59.718 37.037 4.29 0.00 0.00 2.67
70 71 6.711277 AGCATATGTGTCAAGTTTAGGAGAA 58.289 36.000 4.29 0.00 0.00 2.87
71 72 6.299805 AGCATATGTGTCAAGTTTAGGAGA 57.700 37.500 4.29 0.00 0.00 3.71
75 76 5.796935 GTGCAAGCATATGTGTCAAGTTTAG 59.203 40.000 4.29 0.00 0.00 1.85
77 78 4.279169 AGTGCAAGCATATGTGTCAAGTTT 59.721 37.500 4.29 0.00 0.00 2.66
91 92 6.572519 AGTAAATTCAGAAAAAGTGCAAGCA 58.427 32.000 0.00 0.00 0.00 3.91
92 93 8.748380 ATAGTAAATTCAGAAAAAGTGCAAGC 57.252 30.769 0.00 0.00 0.00 4.01
95 96 9.283768 TCTGATAGTAAATTCAGAAAAAGTGCA 57.716 29.630 0.36 0.00 43.97 4.57
114 129 7.262772 TCCACCAACGTTATAAAGTCTGATAG 58.737 38.462 0.00 0.00 0.00 2.08
116 131 6.045072 TCCACCAACGTTATAAAGTCTGAT 57.955 37.500 0.00 0.00 0.00 2.90
123 138 7.989416 ATTTCTCTTCCACCAACGTTATAAA 57.011 32.000 0.00 0.00 0.00 1.40
144 159 0.765510 GAGCACCTCGGGGGATATTT 59.234 55.000 6.13 0.00 38.76 1.40
153 168 2.417516 CCCGTATGAGCACCTCGG 59.582 66.667 0.00 0.00 40.72 4.63
173 188 2.570581 GTTACGCACGCACGCATG 60.571 61.111 0.00 0.00 36.19 4.06
174 189 4.128982 CGTTACGCACGCACGCAT 62.129 61.111 0.00 0.00 43.37 4.73
212 227 0.902531 CCCATGACCACGTAAGACCT 59.097 55.000 0.00 0.00 43.62 3.85
213 228 0.899720 TCCCATGACCACGTAAGACC 59.100 55.000 0.00 0.00 43.62 3.85
214 229 2.798499 CGATCCCATGACCACGTAAGAC 60.798 54.545 0.00 0.00 43.62 3.01
215 230 1.407618 CGATCCCATGACCACGTAAGA 59.592 52.381 0.00 0.00 43.62 2.10
217 232 0.179094 GCGATCCCATGACCACGTAA 60.179 55.000 0.00 0.00 0.00 3.18
218 233 1.440060 GCGATCCCATGACCACGTA 59.560 57.895 0.00 0.00 0.00 3.57
219 234 2.186903 GCGATCCCATGACCACGT 59.813 61.111 0.00 0.00 0.00 4.49
220 235 2.961721 CGCGATCCCATGACCACG 60.962 66.667 0.00 0.00 0.00 4.94
221 236 2.173669 CACGCGATCCCATGACCAC 61.174 63.158 15.93 0.00 0.00 4.16
222 237 1.685355 ATCACGCGATCCCATGACCA 61.685 55.000 15.93 0.00 0.00 4.02
223 238 1.069765 ATCACGCGATCCCATGACC 59.930 57.895 15.93 0.00 0.00 4.02
224 239 0.530650 ACATCACGCGATCCCATGAC 60.531 55.000 15.93 0.00 0.00 3.06
225 240 0.177836 AACATCACGCGATCCCATGA 59.822 50.000 15.93 4.92 0.00 3.07
226 241 1.016627 AAACATCACGCGATCCCATG 58.983 50.000 15.93 9.40 0.00 3.66
227 242 1.750193 AAAACATCACGCGATCCCAT 58.250 45.000 15.93 0.00 0.00 4.00
228 243 1.529226 AAAAACATCACGCGATCCCA 58.471 45.000 15.93 0.00 0.00 4.37
247 262 6.996509 ACCGTACAGTATCCTAGTTGAAAAA 58.003 36.000 0.00 0.00 0.00 1.94
248 263 6.594788 ACCGTACAGTATCCTAGTTGAAAA 57.405 37.500 0.00 0.00 0.00 2.29
249 264 6.594788 AACCGTACAGTATCCTAGTTGAAA 57.405 37.500 0.00 0.00 0.00 2.69
250 265 6.392354 CAAACCGTACAGTATCCTAGTTGAA 58.608 40.000 0.00 0.00 0.00 2.69
251 266 5.105635 CCAAACCGTACAGTATCCTAGTTGA 60.106 44.000 0.00 0.00 0.00 3.18
252 267 5.107133 CCAAACCGTACAGTATCCTAGTTG 58.893 45.833 0.00 0.00 0.00 3.16
253 268 4.161001 CCCAAACCGTACAGTATCCTAGTT 59.839 45.833 0.00 0.00 0.00 2.24
254 269 3.703052 CCCAAACCGTACAGTATCCTAGT 59.297 47.826 0.00 0.00 0.00 2.57
255 270 3.703052 ACCCAAACCGTACAGTATCCTAG 59.297 47.826 0.00 0.00 0.00 3.02
256 271 3.711863 ACCCAAACCGTACAGTATCCTA 58.288 45.455 0.00 0.00 0.00 2.94
257 272 2.543635 ACCCAAACCGTACAGTATCCT 58.456 47.619 0.00 0.00 0.00 3.24
258 273 3.339253 AACCCAAACCGTACAGTATCC 57.661 47.619 0.00 0.00 0.00 2.59
259 274 6.572519 TGTATAACCCAAACCGTACAGTATC 58.427 40.000 0.00 0.00 0.00 2.24
260 275 6.407299 CCTGTATAACCCAAACCGTACAGTAT 60.407 42.308 8.86 0.00 38.08 2.12
261 276 5.105392 CCTGTATAACCCAAACCGTACAGTA 60.105 44.000 8.86 0.00 38.08 2.74
262 277 4.322953 CCTGTATAACCCAAACCGTACAGT 60.323 45.833 8.86 0.00 38.08 3.55
263 278 4.186159 CCTGTATAACCCAAACCGTACAG 58.814 47.826 0.00 0.00 38.97 2.74
264 279 3.055240 CCCTGTATAACCCAAACCGTACA 60.055 47.826 0.00 0.00 0.00 2.90
265 280 3.534554 CCCTGTATAACCCAAACCGTAC 58.465 50.000 0.00 0.00 0.00 3.67
266 281 2.093021 GCCCTGTATAACCCAAACCGTA 60.093 50.000 0.00 0.00 0.00 4.02
267 282 1.340308 GCCCTGTATAACCCAAACCGT 60.340 52.381 0.00 0.00 0.00 4.83
268 283 1.064979 AGCCCTGTATAACCCAAACCG 60.065 52.381 0.00 0.00 0.00 4.44
269 284 2.820728 AGCCCTGTATAACCCAAACC 57.179 50.000 0.00 0.00 0.00 3.27
270 285 4.080751 TGTCTAGCCCTGTATAACCCAAAC 60.081 45.833 0.00 0.00 0.00 2.93
271 286 4.105577 TGTCTAGCCCTGTATAACCCAAA 58.894 43.478 0.00 0.00 0.00 3.28
272 287 3.709653 CTGTCTAGCCCTGTATAACCCAA 59.290 47.826 0.00 0.00 0.00 4.12
273 288 3.305720 CTGTCTAGCCCTGTATAACCCA 58.694 50.000 0.00 0.00 0.00 4.51
274 289 2.633481 CCTGTCTAGCCCTGTATAACCC 59.367 54.545 0.00 0.00 0.00 4.11
275 290 2.633481 CCCTGTCTAGCCCTGTATAACC 59.367 54.545 0.00 0.00 0.00 2.85
276 291 2.037381 GCCCTGTCTAGCCCTGTATAAC 59.963 54.545 0.00 0.00 0.00 1.89
277 292 2.090719 AGCCCTGTCTAGCCCTGTATAA 60.091 50.000 0.00 0.00 0.00 0.98
278 293 1.503784 AGCCCTGTCTAGCCCTGTATA 59.496 52.381 0.00 0.00 0.00 1.47
279 294 0.266152 AGCCCTGTCTAGCCCTGTAT 59.734 55.000 0.00 0.00 0.00 2.29
280 295 0.042731 AAGCCCTGTCTAGCCCTGTA 59.957 55.000 0.00 0.00 0.00 2.74
281 296 1.229658 AAGCCCTGTCTAGCCCTGT 60.230 57.895 0.00 0.00 0.00 4.00
282 297 1.222936 CAAGCCCTGTCTAGCCCTG 59.777 63.158 0.00 0.00 0.00 4.45
283 298 1.997874 CCAAGCCCTGTCTAGCCCT 60.998 63.158 0.00 0.00 0.00 5.19
284 299 1.348775 ATCCAAGCCCTGTCTAGCCC 61.349 60.000 0.00 0.00 0.00 5.19
285 300 0.107643 GATCCAAGCCCTGTCTAGCC 59.892 60.000 0.00 0.00 0.00 3.93
286 301 1.127343 AGATCCAAGCCCTGTCTAGC 58.873 55.000 0.00 0.00 0.00 3.42
287 302 1.415659 CCAGATCCAAGCCCTGTCTAG 59.584 57.143 0.00 0.00 0.00 2.43
288 303 1.008327 TCCAGATCCAAGCCCTGTCTA 59.992 52.381 0.00 0.00 0.00 2.59
289 304 0.252881 TCCAGATCCAAGCCCTGTCT 60.253 55.000 0.00 0.00 0.00 3.41
290 305 0.107459 GTCCAGATCCAAGCCCTGTC 60.107 60.000 0.00 0.00 0.00 3.51
291 306 0.548682 AGTCCAGATCCAAGCCCTGT 60.549 55.000 0.00 0.00 0.00 4.00
292 307 1.139853 GTAGTCCAGATCCAAGCCCTG 59.860 57.143 0.00 0.00 0.00 4.45
293 308 1.501582 GTAGTCCAGATCCAAGCCCT 58.498 55.000 0.00 0.00 0.00 5.19
294 309 0.105039 CGTAGTCCAGATCCAAGCCC 59.895 60.000 0.00 0.00 0.00 5.19
295 310 1.112113 TCGTAGTCCAGATCCAAGCC 58.888 55.000 0.00 0.00 0.00 4.35
296 311 1.534175 CGTCGTAGTCCAGATCCAAGC 60.534 57.143 0.00 0.00 0.00 4.01
297 312 1.065701 CCGTCGTAGTCCAGATCCAAG 59.934 57.143 0.00 0.00 0.00 3.61
298 313 1.100510 CCGTCGTAGTCCAGATCCAA 58.899 55.000 0.00 0.00 0.00 3.53
299 314 0.750546 CCCGTCGTAGTCCAGATCCA 60.751 60.000 0.00 0.00 0.00 3.41
300 315 2.031360 CCCGTCGTAGTCCAGATCC 58.969 63.158 0.00 0.00 0.00 3.36
301 316 1.359475 GCCCGTCGTAGTCCAGATC 59.641 63.158 0.00 0.00 0.00 2.75
302 317 2.125961 GGCCCGTCGTAGTCCAGAT 61.126 63.158 0.00 0.00 0.00 2.90
303 318 2.753043 GGCCCGTCGTAGTCCAGA 60.753 66.667 0.00 0.00 0.00 3.86
304 319 3.064987 CTGGCCCGTCGTAGTCCAG 62.065 68.421 0.00 0.00 38.41 3.86
305 320 3.066190 CTGGCCCGTCGTAGTCCA 61.066 66.667 0.00 0.00 0.00 4.02
306 321 3.834799 CCTGGCCCGTCGTAGTCC 61.835 72.222 0.00 0.00 0.00 3.85
307 322 0.820891 TATCCTGGCCCGTCGTAGTC 60.821 60.000 0.00 0.00 0.00 2.59
308 323 0.396139 TTATCCTGGCCCGTCGTAGT 60.396 55.000 0.00 0.00 0.00 2.73
309 324 0.748450 TTTATCCTGGCCCGTCGTAG 59.252 55.000 0.00 0.00 0.00 3.51
310 325 1.193323 TTTTATCCTGGCCCGTCGTA 58.807 50.000 0.00 0.00 0.00 3.43
311 326 0.325602 TTTTTATCCTGGCCCGTCGT 59.674 50.000 0.00 0.00 0.00 4.34
312 327 3.162448 TTTTTATCCTGGCCCGTCG 57.838 52.632 0.00 0.00 0.00 5.12
327 342 6.844097 TTTAGTCCCTGTGAGTTTGTTTTT 57.156 33.333 0.00 0.00 0.00 1.94
328 343 6.844097 TTTTAGTCCCTGTGAGTTTGTTTT 57.156 33.333 0.00 0.00 0.00 2.43
329 344 7.013942 GGTATTTTAGTCCCTGTGAGTTTGTTT 59.986 37.037 0.00 0.00 0.00 2.83
330 345 6.489022 GGTATTTTAGTCCCTGTGAGTTTGTT 59.511 38.462 0.00 0.00 0.00 2.83
331 346 6.002082 GGTATTTTAGTCCCTGTGAGTTTGT 58.998 40.000 0.00 0.00 0.00 2.83
332 347 5.414765 GGGTATTTTAGTCCCTGTGAGTTTG 59.585 44.000 0.00 0.00 38.29 2.93
333 348 5.516062 GGGGTATTTTAGTCCCTGTGAGTTT 60.516 44.000 0.00 0.00 40.88 2.66
334 349 4.018688 GGGGTATTTTAGTCCCTGTGAGTT 60.019 45.833 0.00 0.00 40.88 3.01
335 350 3.522343 GGGGTATTTTAGTCCCTGTGAGT 59.478 47.826 0.00 0.00 40.88 3.41
336 351 4.152284 GGGGTATTTTAGTCCCTGTGAG 57.848 50.000 0.00 0.00 40.88 3.51
342 357 4.492494 TTTCGAGGGGTATTTTAGTCCC 57.508 45.455 0.00 0.00 40.41 4.46
343 358 7.228108 CCTAATTTTCGAGGGGTATTTTAGTCC 59.772 40.741 0.00 0.00 0.00 3.85
344 359 7.772292 ACCTAATTTTCGAGGGGTATTTTAGTC 59.228 37.037 0.00 0.00 37.14 2.59
345 360 7.636579 ACCTAATTTTCGAGGGGTATTTTAGT 58.363 34.615 0.00 0.00 37.14 2.24
346 361 8.515695 AACCTAATTTTCGAGGGGTATTTTAG 57.484 34.615 0.00 0.00 37.14 1.85
347 362 9.617523 CTAACCTAATTTTCGAGGGGTATTTTA 57.382 33.333 0.00 0.00 37.14 1.52
348 363 7.558807 CCTAACCTAATTTTCGAGGGGTATTTT 59.441 37.037 0.00 0.00 37.14 1.82
349 364 7.058525 CCTAACCTAATTTTCGAGGGGTATTT 58.941 38.462 0.00 0.00 37.14 1.40
350 365 6.410041 CCCTAACCTAATTTTCGAGGGGTATT 60.410 42.308 0.00 0.00 38.83 1.89
351 366 5.072736 CCCTAACCTAATTTTCGAGGGGTAT 59.927 44.000 0.00 0.00 38.83 2.73
352 367 4.409901 CCCTAACCTAATTTTCGAGGGGTA 59.590 45.833 0.00 0.00 38.83 3.69
353 368 3.201487 CCCTAACCTAATTTTCGAGGGGT 59.799 47.826 0.00 0.00 38.83 4.95
354 369 3.816994 CCCTAACCTAATTTTCGAGGGG 58.183 50.000 0.00 0.00 38.83 4.79
355 370 3.457012 TCCCCTAACCTAATTTTCGAGGG 59.543 47.826 0.00 0.00 41.66 4.30
356 371 4.704965 CTCCCCTAACCTAATTTTCGAGG 58.295 47.826 0.00 0.00 38.92 4.63
357 372 4.127907 GCTCCCCTAACCTAATTTTCGAG 58.872 47.826 0.00 0.00 0.00 4.04
358 373 3.520317 TGCTCCCCTAACCTAATTTTCGA 59.480 43.478 0.00 0.00 0.00 3.71
359 374 3.626217 GTGCTCCCCTAACCTAATTTTCG 59.374 47.826 0.00 0.00 0.00 3.46
360 375 3.952323 GGTGCTCCCCTAACCTAATTTTC 59.048 47.826 0.00 0.00 0.00 2.29
361 376 3.623954 CGGTGCTCCCCTAACCTAATTTT 60.624 47.826 0.00 0.00 0.00 1.82
362 377 2.092592 CGGTGCTCCCCTAACCTAATTT 60.093 50.000 0.00 0.00 0.00 1.82
363 378 1.489230 CGGTGCTCCCCTAACCTAATT 59.511 52.381 0.00 0.00 0.00 1.40
364 379 1.129058 CGGTGCTCCCCTAACCTAAT 58.871 55.000 0.00 0.00 0.00 1.73
365 380 0.979187 CCGGTGCTCCCCTAACCTAA 60.979 60.000 0.00 0.00 0.00 2.69
366 381 1.382146 CCGGTGCTCCCCTAACCTA 60.382 63.158 0.00 0.00 0.00 3.08
367 382 2.687566 CCGGTGCTCCCCTAACCT 60.688 66.667 0.00 0.00 0.00 3.50
368 383 2.686106 TCCGGTGCTCCCCTAACC 60.686 66.667 0.00 0.00 0.00 2.85
369 384 2.901042 CTCCGGTGCTCCCCTAAC 59.099 66.667 0.00 0.00 0.00 2.34
370 385 3.081409 GCTCCGGTGCTCCCCTAA 61.081 66.667 20.97 0.00 0.00 2.69
371 386 4.392166 TGCTCCGGTGCTCCCCTA 62.392 66.667 27.24 4.97 0.00 3.53
394 409 4.455877 CAGTTACTTTTAGCCTCCAACAGG 59.544 45.833 0.00 0.00 46.82 4.00
395 410 5.063880 ACAGTTACTTTTAGCCTCCAACAG 58.936 41.667 0.00 0.00 0.00 3.16
396 411 5.043737 ACAGTTACTTTTAGCCTCCAACA 57.956 39.130 0.00 0.00 0.00 3.33
397 412 5.758924 CAACAGTTACTTTTAGCCTCCAAC 58.241 41.667 0.00 0.00 0.00 3.77
398 413 4.277423 GCAACAGTTACTTTTAGCCTCCAA 59.723 41.667 0.00 0.00 0.00 3.53
399 414 3.818773 GCAACAGTTACTTTTAGCCTCCA 59.181 43.478 0.00 0.00 0.00 3.86
400 415 3.190744 GGCAACAGTTACTTTTAGCCTCC 59.809 47.826 13.46 0.00 37.89 4.30
401 416 3.818773 TGGCAACAGTTACTTTTAGCCTC 59.181 43.478 18.17 2.86 46.17 4.70
402 417 3.827722 TGGCAACAGTTACTTTTAGCCT 58.172 40.909 18.17 0.00 46.17 4.58
439 454 0.468226 GACGAGTCCATATTGGCCCA 59.532 55.000 0.00 0.00 37.47 5.36
577 646 1.538419 GGATTCCCTACTCGAAAGCGG 60.538 57.143 0.00 0.00 38.28 5.52
700 941 1.530323 TAGCGGGAAAAGACAAAGCC 58.470 50.000 0.00 0.00 0.00 4.35
786 1045 8.177663 AGAAAAATAAACATATCTGTCACTGCG 58.822 33.333 0.00 0.00 33.36 5.18
849 1135 1.334869 CAGATATTTTCCTGGCCGTGC 59.665 52.381 0.00 0.00 0.00 5.34
885 4359 1.192146 TCTAGCCGTCCTGCCAAGTT 61.192 55.000 0.00 0.00 0.00 2.66
951 4437 1.134670 GCTAGCTAGTGGTTCAGGTGG 60.135 57.143 21.62 0.00 0.00 4.61
999 4500 2.780595 CGTGAGCTTTACCCCCATG 58.219 57.895 0.00 0.00 0.00 3.66
1248 4749 4.977126 GAGGCCGCGATACCGACG 62.977 72.222 8.23 0.00 38.22 5.12
1302 4809 2.994995 AGCACCACACGATCCCGA 60.995 61.111 0.00 0.00 39.50 5.14
1307 4814 1.192146 AGGTACCAGCACCACACGAT 61.192 55.000 15.94 0.00 41.40 3.73
1308 4815 1.835267 AGGTACCAGCACCACACGA 60.835 57.895 15.94 0.00 41.40 4.35
1309 4816 1.667830 CAGGTACCAGCACCACACG 60.668 63.158 15.94 0.00 41.40 4.49
1310 4817 1.966451 GCAGGTACCAGCACCACAC 60.966 63.158 23.26 0.00 41.40 3.82
1311 4818 2.429930 GCAGGTACCAGCACCACA 59.570 61.111 23.26 0.00 41.40 4.17
1314 4821 1.074951 AAAGGCAGGTACCAGCACC 59.925 57.895 28.14 16.30 39.02 5.01
1318 4843 1.739067 GCTACAAAGGCAGGTACCAG 58.261 55.000 15.94 7.43 0.00 4.00
1323 4848 1.263356 TACTCGCTACAAAGGCAGGT 58.737 50.000 0.00 0.00 0.00 4.00
1380 4915 2.149578 CACTTCTTCAGCACCTTCAGG 58.850 52.381 0.00 0.00 42.17 3.86
1414 4949 1.435408 GCGCTGAGGAAGAAGATGCC 61.435 60.000 0.00 0.00 0.00 4.40
1466 5004 0.733729 CTCCTCCTCTTGACGTACCG 59.266 60.000 0.00 0.00 0.00 4.02
1473 5011 2.003830 TCTTCCTCCTCCTCCTCTTGA 58.996 52.381 0.00 0.00 0.00 3.02
1488 5041 3.372206 CCATGTCGACTTCACAATCTTCC 59.628 47.826 17.92 0.00 0.00 3.46
1491 5044 3.589988 GTCCATGTCGACTTCACAATCT 58.410 45.455 17.92 0.00 0.00 2.40
1492 5045 2.345641 CGTCCATGTCGACTTCACAATC 59.654 50.000 17.92 0.00 0.00 2.67
1493 5046 2.337583 CGTCCATGTCGACTTCACAAT 58.662 47.619 17.92 0.00 0.00 2.71
1708 5316 0.669619 TGACAGACGCGTGGAGTAAA 59.330 50.000 20.70 1.22 0.00 2.01
1726 5341 5.639506 CACCAAATATCCTAAGCCTATCGTG 59.360 44.000 0.00 0.00 0.00 4.35
1729 5344 6.534634 ACACACCAAATATCCTAAGCCTATC 58.465 40.000 0.00 0.00 0.00 2.08
1743 5366 5.838531 TCGAAAACCTAAACACACCAAAT 57.161 34.783 0.00 0.00 0.00 2.32
1746 5369 5.838531 ATTTCGAAAACCTAAACACACCA 57.161 34.783 15.66 0.00 0.00 4.17
1806 5454 7.555195 ACAGCTGAGATCATGTCAATTTCATTA 59.445 33.333 23.35 0.00 0.00 1.90
1828 5732 6.284459 ACATAATTGAGAGGCTAGTAACAGC 58.716 40.000 0.00 0.00 41.02 4.40
2001 5916 3.799755 CCAACTACGCCGCCTTGC 61.800 66.667 0.00 0.00 0.00 4.01
2038 5957 3.858129 GCCGGATATTTATCAACGTCGGA 60.858 47.826 5.05 0.38 35.76 4.55
2104 6038 2.118313 TTCGTGGACAGGACTCGATA 57.882 50.000 0.00 0.00 0.00 2.92
2113 6047 3.047877 GCCGGGTTTCGTGGACAG 61.048 66.667 2.18 0.00 37.11 3.51
2120 6054 2.839043 TACGTCCATGCCGGGTTTCG 62.839 60.000 2.18 0.00 38.88 3.46
2129 6063 2.165301 GCTCCACGTACGTCCATGC 61.165 63.158 19.94 16.00 0.00 4.06
2132 6066 1.007038 GTTGCTCCACGTACGTCCA 60.007 57.895 19.94 10.46 0.00 4.02
2183 6122 2.097466 CGCCGGTCTAAAATGCAAGATT 59.903 45.455 1.90 0.00 0.00 2.40
2190 6129 1.347221 GTCGCGCCGGTCTAAAATG 59.653 57.895 1.90 0.00 0.00 2.32
2191 6130 2.162754 CGTCGCGCCGGTCTAAAAT 61.163 57.895 0.00 0.00 0.00 1.82
2222 6163 0.463654 GTTACCAGCATCGGCATGGA 60.464 55.000 10.64 0.00 44.61 3.41
2235 6176 1.652012 GCTGCACGCTTTGTTACCA 59.348 52.632 0.00 0.00 35.14 3.25
2239 6180 2.412937 GTGGCTGCACGCTTTGTT 59.587 55.556 0.50 0.00 39.13 2.83
2269 6210 2.427453 ACTCCTCTATACCAACACGCAG 59.573 50.000 0.00 0.00 0.00 5.18
2270 6211 2.165641 CACTCCTCTATACCAACACGCA 59.834 50.000 0.00 0.00 0.00 5.24
2271 6212 2.165845 ACACTCCTCTATACCAACACGC 59.834 50.000 0.00 0.00 0.00 5.34
2287 6228 7.237920 TCGAAAACCTAAACTAAACACACTC 57.762 36.000 0.00 0.00 0.00 3.51
2309 6250 9.624697 TTTGAAAGGAAGATGATGTTAATTTCG 57.375 29.630 7.01 0.00 0.00 3.46
2343 6284 9.535170 TGGAATGGTAAAGATGGTGTTAATTTA 57.465 29.630 0.00 0.00 0.00 1.40
2350 6291 4.522789 GTGTTGGAATGGTAAAGATGGTGT 59.477 41.667 0.00 0.00 0.00 4.16
2353 6294 3.128589 CCGTGTTGGAATGGTAAAGATGG 59.871 47.826 0.00 0.00 42.00 3.51
2367 6308 1.730451 GGTTTGTGGGTCCGTGTTGG 61.730 60.000 0.00 0.00 40.09 3.77
2368 6309 1.032657 TGGTTTGTGGGTCCGTGTTG 61.033 55.000 0.00 0.00 0.00 3.33
2369 6310 0.106419 ATGGTTTGTGGGTCCGTGTT 60.106 50.000 0.00 0.00 0.00 3.32
2370 6311 0.106419 AATGGTTTGTGGGTCCGTGT 60.106 50.000 0.00 0.00 0.00 4.49
2371 6312 0.596082 GAATGGTTTGTGGGTCCGTG 59.404 55.000 0.00 0.00 0.00 4.94
2372 6313 0.183971 TGAATGGTTTGTGGGTCCGT 59.816 50.000 0.00 0.00 0.00 4.69
2373 6314 1.202114 CATGAATGGTTTGTGGGTCCG 59.798 52.381 0.00 0.00 0.00 4.79
2374 6315 2.524306 TCATGAATGGTTTGTGGGTCC 58.476 47.619 0.00 0.00 0.00 4.46
2375 6316 3.131046 GGATCATGAATGGTTTGTGGGTC 59.869 47.826 0.00 0.00 0.00 4.46
2376 6317 3.099141 GGATCATGAATGGTTTGTGGGT 58.901 45.455 0.00 0.00 0.00 4.51
2377 6318 3.368248 AGGATCATGAATGGTTTGTGGG 58.632 45.455 0.00 0.00 0.00 4.61
2378 6319 3.382546 GGAGGATCATGAATGGTTTGTGG 59.617 47.826 0.00 0.00 36.25 4.17
2379 6320 3.065786 CGGAGGATCATGAATGGTTTGTG 59.934 47.826 0.00 0.00 36.25 3.33
2380 6321 3.282021 CGGAGGATCATGAATGGTTTGT 58.718 45.455 0.00 0.00 36.25 2.83
2381 6322 3.976793 CGGAGGATCATGAATGGTTTG 57.023 47.619 0.00 0.00 36.25 2.93
2397 6338 1.951130 CGAACCATGCGATCCGGAG 60.951 63.158 11.34 0.00 0.00 4.63
2398 6339 2.106131 CGAACCATGCGATCCGGA 59.894 61.111 6.61 6.61 0.00 5.14
2399 6340 2.967076 CCGAACCATGCGATCCGG 60.967 66.667 0.00 0.00 0.00 5.14
2400 6341 2.106131 TCCGAACCATGCGATCCG 59.894 61.111 0.00 0.00 0.00 4.18
2401 6342 0.532862 ATGTCCGAACCATGCGATCC 60.533 55.000 0.00 0.00 0.00 3.36
2402 6343 0.583438 CATGTCCGAACCATGCGATC 59.417 55.000 0.00 0.00 33.90 3.69
2403 6344 0.107703 ACATGTCCGAACCATGCGAT 60.108 50.000 0.00 0.00 42.74 4.58
2404 6345 0.321210 AACATGTCCGAACCATGCGA 60.321 50.000 0.00 0.00 42.74 5.10
2405 6346 0.521291 AAACATGTCCGAACCATGCG 59.479 50.000 0.00 0.00 42.74 4.73
2406 6347 2.327568 CAAAACATGTCCGAACCATGC 58.672 47.619 0.00 0.00 42.74 4.06
2407 6348 2.327568 GCAAAACATGTCCGAACCATG 58.672 47.619 0.00 7.19 44.17 3.66
2408 6349 1.272212 GGCAAAACATGTCCGAACCAT 59.728 47.619 0.00 0.00 0.00 3.55
2409 6350 0.671251 GGCAAAACATGTCCGAACCA 59.329 50.000 0.00 0.00 0.00 3.67
2410 6351 0.671251 TGGCAAAACATGTCCGAACC 59.329 50.000 0.00 0.00 30.45 3.62
2411 6352 2.595386 GATGGCAAAACATGTCCGAAC 58.405 47.619 0.00 0.00 30.45 3.95
2412 6353 1.543802 GGATGGCAAAACATGTCCGAA 59.456 47.619 0.00 0.00 30.45 4.30
2413 6354 1.173043 GGATGGCAAAACATGTCCGA 58.827 50.000 0.00 0.00 30.45 4.55
2414 6355 0.887247 TGGATGGCAAAACATGTCCG 59.113 50.000 0.00 0.00 30.45 4.79
2415 6356 1.404583 GCTGGATGGCAAAACATGTCC 60.405 52.381 0.00 0.00 30.45 4.02
2416 6357 1.733389 CGCTGGATGGCAAAACATGTC 60.733 52.381 0.00 0.00 0.00 3.06
2417 6358 0.244450 CGCTGGATGGCAAAACATGT 59.756 50.000 0.00 0.00 0.00 3.21
2418 6359 1.079875 GCGCTGGATGGCAAAACATG 61.080 55.000 0.00 0.00 0.00 3.21
2419 6360 1.216178 GCGCTGGATGGCAAAACAT 59.784 52.632 0.00 0.00 0.00 2.71
2420 6361 2.650196 GCGCTGGATGGCAAAACA 59.350 55.556 0.00 0.00 0.00 2.83
2421 6362 2.504681 CGCGCTGGATGGCAAAAC 60.505 61.111 5.56 0.00 0.00 2.43
2422 6363 3.746889 CCGCGCTGGATGGCAAAA 61.747 61.111 12.11 0.00 42.00 2.44
2427 6368 2.642996 TACATGACCGCGCTGGATGG 62.643 60.000 22.10 10.74 42.00 3.51
2428 6369 0.601046 ATACATGACCGCGCTGGATG 60.601 55.000 22.10 17.57 42.00 3.51
2429 6370 0.319900 GATACATGACCGCGCTGGAT 60.320 55.000 22.10 8.11 42.00 3.41
2430 6371 1.067416 GATACATGACCGCGCTGGA 59.933 57.895 22.10 2.99 42.00 3.86
2431 6372 2.302952 CGATACATGACCGCGCTGG 61.303 63.158 15.25 15.25 46.41 4.85
2432 6373 0.664466 ATCGATACATGACCGCGCTG 60.664 55.000 5.56 0.00 0.00 5.18
2433 6374 0.387367 GATCGATACATGACCGCGCT 60.387 55.000 5.56 0.00 0.00 5.92
2434 6375 1.344942 GGATCGATACATGACCGCGC 61.345 60.000 1.67 0.00 0.00 6.86
2435 6376 1.065572 CGGATCGATACATGACCGCG 61.066 60.000 8.69 0.00 34.36 6.46
2436 6377 2.725644 CGGATCGATACATGACCGC 58.274 57.895 8.69 0.00 34.36 5.68
2437 6378 0.241213 AGCGGATCGATACATGACCG 59.759 55.000 14.67 14.67 42.63 4.79
2438 6379 1.983972 GAGCGGATCGATACATGACC 58.016 55.000 8.69 0.00 0.00 4.02
2459 6400 4.974989 AAACGACGCCCGGACCAC 62.975 66.667 0.73 0.00 43.93 4.16
2460 6401 3.753806 AAAAACGACGCCCGGACCA 62.754 57.895 0.73 0.00 43.93 4.02
2461 6402 2.958204 GAAAAACGACGCCCGGACC 61.958 63.158 0.73 0.00 43.93 4.46
2462 6403 1.894223 GAGAAAAACGACGCCCGGAC 61.894 60.000 0.73 0.00 43.93 4.79
2463 6404 1.665599 GAGAAAAACGACGCCCGGA 60.666 57.895 0.73 0.00 43.93 5.14
2464 6405 2.858158 GAGAAAAACGACGCCCGG 59.142 61.111 0.00 0.00 43.93 5.73
2465 6406 2.468532 CGAGAAAAACGACGCCCG 59.531 61.111 0.00 0.00 45.44 6.13
2466 6407 2.108344 TTGCGAGAAAAACGACGCCC 62.108 55.000 0.00 0.00 43.49 6.13
2467 6408 0.316360 TTTGCGAGAAAAACGACGCC 60.316 50.000 0.00 0.00 43.49 5.68
2468 6409 0.762504 GTTTGCGAGAAAAACGACGC 59.237 50.000 0.00 0.00 43.98 5.19
2469 6410 2.026990 CAGTTTGCGAGAAAAACGACG 58.973 47.619 0.00 0.00 41.41 5.12
2470 6411 2.031191 TCCAGTTTGCGAGAAAAACGAC 59.969 45.455 0.00 0.00 41.41 4.34
2471 6412 2.281517 TCCAGTTTGCGAGAAAAACGA 58.718 42.857 0.00 0.00 41.41 3.85
2472 6413 2.748461 TCCAGTTTGCGAGAAAAACG 57.252 45.000 0.00 0.00 41.41 3.60
2473 6414 3.066203 TCCTTCCAGTTTGCGAGAAAAAC 59.934 43.478 0.00 0.00 37.71 2.43
2474 6415 3.283751 TCCTTCCAGTTTGCGAGAAAAA 58.716 40.909 0.00 0.00 0.00 1.94
2475 6416 2.878406 CTCCTTCCAGTTTGCGAGAAAA 59.122 45.455 0.00 0.00 0.00 2.29
2476 6417 2.494059 CTCCTTCCAGTTTGCGAGAAA 58.506 47.619 0.00 0.00 0.00 2.52
2477 6418 1.270839 CCTCCTTCCAGTTTGCGAGAA 60.271 52.381 0.00 0.00 0.00 2.87
2478 6419 0.321671 CCTCCTTCCAGTTTGCGAGA 59.678 55.000 0.00 0.00 0.00 4.04
2479 6420 0.674895 CCCTCCTTCCAGTTTGCGAG 60.675 60.000 0.00 0.00 0.00 5.03
2480 6421 1.374947 CCCTCCTTCCAGTTTGCGA 59.625 57.895 0.00 0.00 0.00 5.10
2481 6422 1.675641 CCCCTCCTTCCAGTTTGCG 60.676 63.158 0.00 0.00 0.00 4.85
2482 6423 1.304464 CCCCCTCCTTCCAGTTTGC 60.304 63.158 0.00 0.00 0.00 3.68
2483 6424 0.329596 CTCCCCCTCCTTCCAGTTTG 59.670 60.000 0.00 0.00 0.00 2.93
2484 6425 0.846870 CCTCCCCCTCCTTCCAGTTT 60.847 60.000 0.00 0.00 0.00 2.66
2485 6426 1.229984 CCTCCCCCTCCTTCCAGTT 60.230 63.158 0.00 0.00 0.00 3.16
2486 6427 2.456840 CCTCCCCCTCCTTCCAGT 59.543 66.667 0.00 0.00 0.00 4.00
2487 6428 2.367512 CCCTCCCCCTCCTTCCAG 60.368 72.222 0.00 0.00 0.00 3.86
2488 6429 4.038804 CCCCTCCCCCTCCTTCCA 62.039 72.222 0.00 0.00 0.00 3.53
2489 6430 4.845307 CCCCCTCCCCCTCCTTCC 62.845 77.778 0.00 0.00 0.00 3.46
2513 6454 0.527385 GCAGTTTGGACGCTTGCAAA 60.527 50.000 5.76 5.76 40.43 3.68
2514 6455 1.065600 GCAGTTTGGACGCTTGCAA 59.934 52.632 0.00 0.00 0.00 4.08
2515 6456 1.823470 AGCAGTTTGGACGCTTGCA 60.823 52.632 0.00 0.00 33.85 4.08
2516 6457 1.370900 CAGCAGTTTGGACGCTTGC 60.371 57.895 0.00 0.00 34.84 4.01
2517 6458 0.040958 GACAGCAGTTTGGACGCTTG 60.041 55.000 0.00 0.00 34.84 4.01
2518 6459 0.463654 TGACAGCAGTTTGGACGCTT 60.464 50.000 0.00 0.00 34.84 4.68
2519 6460 0.250467 ATGACAGCAGTTTGGACGCT 60.250 50.000 0.00 0.00 36.54 5.07
2520 6461 0.110056 CATGACAGCAGTTTGGACGC 60.110 55.000 0.00 0.00 0.00 5.19
2521 6462 0.110056 GCATGACAGCAGTTTGGACG 60.110 55.000 0.00 0.00 0.00 4.79
2522 6463 0.953727 TGCATGACAGCAGTTTGGAC 59.046 50.000 0.00 0.00 40.11 4.02
2523 6464 0.953727 GTGCATGACAGCAGTTTGGA 59.046 50.000 0.00 0.00 46.69 3.53
2524 6465 0.669619 TGTGCATGACAGCAGTTTGG 59.330 50.000 0.00 0.00 46.69 3.28
2525 6466 1.065851 TGTGTGCATGACAGCAGTTTG 59.934 47.619 0.00 0.00 46.69 2.93
2526 6467 1.391577 TGTGTGCATGACAGCAGTTT 58.608 45.000 0.00 0.00 46.69 2.66
2527 6468 1.538512 GATGTGTGCATGACAGCAGTT 59.461 47.619 11.08 0.00 46.69 3.16
2528 6469 1.162698 GATGTGTGCATGACAGCAGT 58.837 50.000 11.08 0.00 46.69 4.40
2529 6470 1.130561 CAGATGTGTGCATGACAGCAG 59.869 52.381 16.51 7.29 46.69 4.24
2530 6471 1.161843 CAGATGTGTGCATGACAGCA 58.838 50.000 16.51 0.79 43.35 4.41
2531 6472 0.450583 CCAGATGTGTGCATGACAGC 59.549 55.000 8.58 8.58 34.28 4.40
2532 6473 2.103537 TCCAGATGTGTGCATGACAG 57.896 50.000 0.00 0.00 34.28 3.51
2533 6474 2.793288 ATCCAGATGTGTGCATGACA 57.207 45.000 0.00 4.19 35.07 3.58
2534 6475 2.874701 GGTATCCAGATGTGTGCATGAC 59.125 50.000 0.00 0.00 35.07 3.06
2535 6476 2.158769 GGGTATCCAGATGTGTGCATGA 60.159 50.000 0.00 0.00 35.07 3.07
2536 6477 2.224606 GGGTATCCAGATGTGTGCATG 58.775 52.381 0.00 0.00 35.07 4.06
2537 6478 1.202687 CGGGTATCCAGATGTGTGCAT 60.203 52.381 0.00 0.00 38.18 3.96
2538 6479 0.177836 CGGGTATCCAGATGTGTGCA 59.822 55.000 0.00 0.00 0.00 4.57
2539 6480 0.532862 CCGGGTATCCAGATGTGTGC 60.533 60.000 0.00 0.00 0.00 4.57
2540 6481 0.106708 CCCGGGTATCCAGATGTGTG 59.893 60.000 14.18 0.00 0.00 3.82
2541 6482 1.696097 GCCCGGGTATCCAGATGTGT 61.696 60.000 24.63 0.00 0.00 3.72
2542 6483 1.071471 GCCCGGGTATCCAGATGTG 59.929 63.158 24.63 0.00 0.00 3.21
2543 6484 2.147387 GGCCCGGGTATCCAGATGT 61.147 63.158 24.63 0.00 0.00 3.06
2544 6485 2.750350 GGCCCGGGTATCCAGATG 59.250 66.667 24.63 0.00 0.00 2.90
2545 6486 2.529389 GGGCCCGGGTATCCAGAT 60.529 66.667 24.63 0.00 0.00 2.90
2546 6487 4.096816 TGGGCCCGGGTATCCAGA 62.097 66.667 24.63 2.27 0.00 3.86
2547 6488 3.873812 GTGGGCCCGGGTATCCAG 61.874 72.222 25.62 0.13 0.00 3.86
2548 6489 4.424867 AGTGGGCCCGGGTATCCA 62.425 66.667 24.63 23.43 0.00 3.41
2549 6490 3.557290 GAGTGGGCCCGGGTATCC 61.557 72.222 24.63 21.09 0.00 2.59
2550 6491 1.917336 TTTGAGTGGGCCCGGGTATC 61.917 60.000 24.63 13.40 0.00 2.24
2551 6492 1.926489 TTTGAGTGGGCCCGGGTAT 60.926 57.895 24.63 3.24 0.00 2.73
2552 6493 2.529643 TTTGAGTGGGCCCGGGTA 60.530 61.111 24.63 6.20 0.00 3.69
2553 6494 4.280019 GTTTGAGTGGGCCCGGGT 62.280 66.667 24.63 3.03 0.00 5.28
2554 6495 4.278513 TGTTTGAGTGGGCCCGGG 62.279 66.667 19.09 19.09 0.00 5.73
2555 6496 2.672996 CTGTTTGAGTGGGCCCGG 60.673 66.667 19.37 0.00 0.00 5.73
2556 6497 1.966451 GACTGTTTGAGTGGGCCCG 60.966 63.158 19.37 0.87 33.83 6.13
2557 6498 0.178990 AAGACTGTTTGAGTGGGCCC 60.179 55.000 17.59 17.59 33.83 5.80
2558 6499 1.609072 GAAAGACTGTTTGAGTGGGCC 59.391 52.381 0.00 0.00 33.83 5.80
2559 6500 2.550180 GAGAAAGACTGTTTGAGTGGGC 59.450 50.000 0.00 0.00 33.83 5.36
2560 6501 2.802816 CGAGAAAGACTGTTTGAGTGGG 59.197 50.000 0.00 0.00 33.83 4.61
2561 6502 3.491267 GTCGAGAAAGACTGTTTGAGTGG 59.509 47.826 0.00 0.00 38.09 4.00
2562 6503 3.491267 GGTCGAGAAAGACTGTTTGAGTG 59.509 47.826 0.00 0.00 40.76 3.51
2563 6504 3.718815 GGTCGAGAAAGACTGTTTGAGT 58.281 45.455 0.00 0.00 40.76 3.41
2564 6505 2.726760 CGGTCGAGAAAGACTGTTTGAG 59.273 50.000 0.00 0.00 41.36 3.02
2565 6506 2.739292 CGGTCGAGAAAGACTGTTTGA 58.261 47.619 0.00 0.00 41.36 2.69
2566 6507 1.192534 GCGGTCGAGAAAGACTGTTTG 59.807 52.381 7.63 0.00 46.38 2.93
2567 6508 1.202486 TGCGGTCGAGAAAGACTGTTT 60.202 47.619 7.63 0.00 46.38 2.83
2568 6509 0.387929 TGCGGTCGAGAAAGACTGTT 59.612 50.000 7.63 0.00 46.38 3.16
2569 6510 0.603569 ATGCGGTCGAGAAAGACTGT 59.396 50.000 7.63 0.00 46.38 3.55
2571 6512 0.888619 TGATGCGGTCGAGAAAGACT 59.111 50.000 0.00 0.00 40.76 3.24
2572 6513 1.927895 ATGATGCGGTCGAGAAAGAC 58.072 50.000 0.00 0.00 40.25 3.01
2573 6514 2.672961 AATGATGCGGTCGAGAAAGA 57.327 45.000 0.00 0.00 0.00 2.52
2574 6515 2.030946 GGAAATGATGCGGTCGAGAAAG 59.969 50.000 0.00 0.00 0.00 2.62
2575 6516 2.006888 GGAAATGATGCGGTCGAGAAA 58.993 47.619 0.00 0.00 0.00 2.52
2576 6517 1.651987 GGAAATGATGCGGTCGAGAA 58.348 50.000 0.00 0.00 0.00 2.87
2577 6518 0.179084 GGGAAATGATGCGGTCGAGA 60.179 55.000 0.00 0.00 0.00 4.04
2578 6519 1.490693 CGGGAAATGATGCGGTCGAG 61.491 60.000 0.00 0.00 0.00 4.04
2579 6520 1.520564 CGGGAAATGATGCGGTCGA 60.521 57.895 0.00 0.00 0.00 4.20
2580 6521 3.014036 CGGGAAATGATGCGGTCG 58.986 61.111 0.00 0.00 0.00 4.79
2581 6522 2.715624 GCGGGAAATGATGCGGTC 59.284 61.111 0.00 0.00 0.00 4.79
2582 6523 2.828549 GGCGGGAAATGATGCGGT 60.829 61.111 0.00 0.00 0.00 5.68
2583 6524 2.516930 AGGCGGGAAATGATGCGG 60.517 61.111 0.00 0.00 0.00 5.69
2584 6525 1.375853 TTCAGGCGGGAAATGATGCG 61.376 55.000 0.00 0.00 0.00 4.73
2585 6526 0.383231 CTTCAGGCGGGAAATGATGC 59.617 55.000 0.00 0.00 0.00 3.91
2586 6527 2.042686 TCTTCAGGCGGGAAATGATG 57.957 50.000 0.00 0.00 0.00 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.