Multiple sequence alignment - TraesCS7D01G421100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G421100 chr7D 100.000 3418 0 0 1 3418 540717444 540714027 0.000000e+00 6312.0
1 TraesCS7D01G421100 chr7D 86.952 1824 148 45 994 2758 541494734 541496526 0.000000e+00 1967.0
2 TraesCS7D01G421100 chr7D 86.995 1238 101 27 994 2192 540793517 540792301 0.000000e+00 1339.0
3 TraesCS7D01G421100 chr7D 88.302 530 35 13 2188 2703 540792230 540791714 8.110000e-171 610.0
4 TraesCS7D01G421100 chr7D 85.271 387 50 5 2758 3137 541496579 541496965 3.200000e-105 392.0
5 TraesCS7D01G421100 chr7D 78.571 140 22 7 2217 2349 421790100 421789962 6.080000e-13 86.1
6 TraesCS7D01G421100 chr7A 89.849 2453 132 48 740 3137 622373741 622371351 0.000000e+00 3042.0
7 TraesCS7D01G421100 chr7A 85.597 1826 143 53 994 2758 624807345 624809111 0.000000e+00 1805.0
8 TraesCS7D01G421100 chr7A 87.248 1239 93 33 994 2192 623323355 623322142 0.000000e+00 1352.0
9 TraesCS7D01G421100 chr7A 85.751 386 43 11 2758 3138 624809163 624809541 6.870000e-107 398.0
10 TraesCS7D01G421100 chr7A 90.734 259 22 2 2188 2445 623322071 623321814 9.080000e-91 344.0
11 TraesCS7D01G421100 chr7A 96.739 184 4 1 3235 3418 622371301 622371120 4.290000e-79 305.0
12 TraesCS7D01G421100 chr7A 82.800 250 22 7 2844 3072 623297967 623297718 1.610000e-48 204.0
13 TraesCS7D01G421100 chr7A 91.429 140 8 2 567 705 622373876 622373740 4.500000e-44 189.0
14 TraesCS7D01G421100 chr7A 100.000 30 0 0 3224 3253 622371343 622371314 4.760000e-04 56.5
15 TraesCS7D01G421100 chr7A 94.444 36 1 1 2823 2858 623320849 623320815 2.000000e-03 54.7
16 TraesCS7D01G421100 chr7B 91.908 1211 59 18 1376 2549 584036600 584035392 0.000000e+00 1657.0
17 TraesCS7D01G421100 chr7B 85.401 1459 138 40 1359 2758 585487200 585488642 0.000000e+00 1445.0
18 TraesCS7D01G421100 chr7B 89.972 708 40 9 567 1259 584037386 584036695 0.000000e+00 885.0
19 TraesCS7D01G421100 chr7B 81.049 1182 130 64 1079 2192 584270303 584269148 0.000000e+00 856.0
20 TraesCS7D01G421100 chr7B 93.874 506 26 2 2608 3108 584035386 584034881 0.000000e+00 758.0
21 TraesCS7D01G421100 chr7B 87.246 541 43 16 2188 2703 584269077 584268538 8.170000e-166 593.0
22 TraesCS7D01G421100 chr7B 86.559 372 45 4 2758 3127 585488696 585489064 4.110000e-109 405.0
23 TraesCS7D01G421100 chr7B 89.369 301 21 8 2845 3138 584262750 584262454 5.390000e-98 368.0
24 TraesCS7D01G421100 chr7B 91.111 270 23 1 994 1262 585486886 585487155 6.970000e-97 364.0
25 TraesCS7D01G421100 chr7B 98.919 185 2 0 3234 3418 584034790 584034606 7.070000e-87 331.0
26 TraesCS7D01G421100 chr7B 92.308 104 8 0 3124 3227 117797339 117797442 7.640000e-32 148.0
27 TraesCS7D01G421100 chr7B 84.112 107 15 2 3224 3329 585489068 585489173 6.030000e-18 102.0
28 TraesCS7D01G421100 chr7B 83.333 78 10 1 1184 1258 439416603 439416680 6.120000e-08 69.4
29 TraesCS7D01G421100 chr7B 100.000 29 0 0 3225 3253 584034832 584034804 2.000000e-03 54.7
30 TraesCS7D01G421100 chr3D 91.395 337 19 2 5 340 372031060 372030733 1.450000e-123 453.0
31 TraesCS7D01G421100 chr3D 90.995 211 16 3 356 565 372030747 372030539 7.220000e-72 281.0
32 TraesCS7D01G421100 chr6A 90.237 338 32 1 4 340 466665514 466665177 1.130000e-119 440.0
33 TraesCS7D01G421100 chr3B 86.804 341 43 2 1 340 464691249 464691588 2.490000e-101 379.0
34 TraesCS7D01G421100 chr3B 86.217 341 45 2 1 340 758702327 758702666 5.390000e-98 368.0
35 TraesCS7D01G421100 chr3B 84.918 305 45 1 1 304 700335618 700335922 1.190000e-79 307.0
36 TraesCS7D01G421100 chr3B 86.730 211 24 3 356 563 758702652 758702861 7.380000e-57 231.0
37 TraesCS7D01G421100 chr2D 86.842 342 42 3 1 340 588277271 588277611 2.490000e-101 379.0
38 TraesCS7D01G421100 chr2D 96.000 100 2 2 3131 3229 174430741 174430839 9.820000e-36 161.0
39 TraesCS7D01G421100 chr2B 86.391 338 44 2 4 340 102898176 102897840 5.390000e-98 368.0
40 TraesCS7D01G421100 chr2B 89.524 210 18 3 356 562 102897854 102897646 2.620000e-66 263.0
41 TraesCS7D01G421100 chr2B 84.524 84 13 0 3335 3418 1917644 1917561 2.190000e-12 84.2
42 TraesCS7D01G421100 chr2B 82.653 98 8 7 468 559 78413076 78413170 1.020000e-10 78.7
43 TraesCS7D01G421100 chr2A 86.408 309 41 1 4 311 50446030 50445722 1.520000e-88 337.0
44 TraesCS7D01G421100 chr2A 96.875 96 2 1 3129 3224 18339514 18339608 3.530000e-35 159.0
45 TraesCS7D01G421100 chr2A 92.857 112 4 4 3136 3243 754446729 754446840 3.530000e-35 159.0
46 TraesCS7D01G421100 chr4D 86.184 304 41 1 2 304 211125920 211126223 9.150000e-86 327.0
47 TraesCS7D01G421100 chrUn 95.192 104 2 3 3128 3230 94636350 94636249 9.820000e-36 161.0
48 TraesCS7D01G421100 chr5B 94.175 103 4 2 3126 3227 550925187 550925086 4.570000e-34 156.0
49 TraesCS7D01G421100 chr1A 97.778 90 2 0 3133 3222 186714658 186714747 4.570000e-34 156.0
50 TraesCS7D01G421100 chr1A 90.278 72 5 2 496 565 168567396 168567467 3.630000e-15 93.5
51 TraesCS7D01G421100 chr3A 93.204 103 5 2 3136 3236 38264532 38264430 2.120000e-32 150.0
52 TraesCS7D01G421100 chr1B 90.351 114 9 2 3131 3244 498863836 498863947 7.640000e-32 148.0
53 TraesCS7D01G421100 chr6D 93.939 66 3 1 499 564 467834284 467834220 7.810000e-17 99.0
54 TraesCS7D01G421100 chr1D 92.754 69 3 2 499 566 486058768 486058835 7.810000e-17 99.0
55 TraesCS7D01G421100 chr6B 92.424 66 4 1 499 564 657620039 657620103 3.630000e-15 93.5
56 TraesCS7D01G421100 chr5D 92.424 66 3 2 499 563 223871084 223871020 3.630000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G421100 chr7D 540714027 540717444 3417 True 6312.000000 6312 100.000000 1 3418 1 chr7D.!!$R2 3417
1 TraesCS7D01G421100 chr7D 541494734 541496965 2231 False 1179.500000 1967 86.111500 994 3137 2 chr7D.!!$F1 2143
2 TraesCS7D01G421100 chr7D 540791714 540793517 1803 True 974.500000 1339 87.648500 994 2703 2 chr7D.!!$R3 1709
3 TraesCS7D01G421100 chr7A 624807345 624809541 2196 False 1101.500000 1805 85.674000 994 3138 2 chr7A.!!$F1 2144
4 TraesCS7D01G421100 chr7A 622371120 622373876 2756 True 898.125000 3042 94.504250 567 3418 4 chr7A.!!$R2 2851
5 TraesCS7D01G421100 chr7A 623320815 623323355 2540 True 583.566667 1352 90.808667 994 2858 3 chr7A.!!$R3 1864
6 TraesCS7D01G421100 chr7B 584034606 584037386 2780 True 737.140000 1657 94.934600 567 3418 5 chr7B.!!$R2 2851
7 TraesCS7D01G421100 chr7B 584268538 584270303 1765 True 724.500000 856 84.147500 1079 2703 2 chr7B.!!$R3 1624
8 TraesCS7D01G421100 chr7B 585486886 585489173 2287 False 579.000000 1445 86.795750 994 3329 4 chr7B.!!$F3 2335
9 TraesCS7D01G421100 chr3D 372030539 372031060 521 True 367.000000 453 91.195000 5 565 2 chr3D.!!$R1 560
10 TraesCS7D01G421100 chr3B 758702327 758702861 534 False 299.500000 368 86.473500 1 563 2 chr3B.!!$F3 562
11 TraesCS7D01G421100 chr2B 102897646 102898176 530 True 315.500000 368 87.957500 4 562 2 chr2B.!!$R2 558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
782 783 0.031994 ATGTTTTCTTGCCACACGCC 59.968 50.0 0.0 0.0 36.24 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2447 2697 0.03601 CGAGGCTTCCACCATGAAGT 60.036 55.0 0.0 0.0 42.98 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 4.161565 TCTGGAAGAAGAAAAGGCGCTATA 59.838 41.667 7.64 0.00 42.31 1.31
42 43 5.250200 TGGAAGAAGAAAAGGCGCTATAAA 58.750 37.500 7.64 0.00 0.00 1.40
44 45 5.585047 GGAAGAAGAAAAGGCGCTATAAAGA 59.415 40.000 7.64 0.00 0.00 2.52
91 92 4.037208 CCTTATGGAGCTTATGGTTGCTTG 59.963 45.833 0.00 0.00 39.91 4.01
201 202 4.329545 TGTGCGGACTCCCAAGCC 62.330 66.667 8.99 0.00 0.00 4.35
244 245 0.460811 GCTGCTCGACCATCATCACA 60.461 55.000 0.00 0.00 0.00 3.58
245 246 2.008543 GCTGCTCGACCATCATCACAA 61.009 52.381 0.00 0.00 0.00 3.33
246 247 1.931841 CTGCTCGACCATCATCACAAG 59.068 52.381 0.00 0.00 0.00 3.16
247 248 1.293924 GCTCGACCATCATCACAAGG 58.706 55.000 0.00 0.00 0.00 3.61
248 249 1.134699 GCTCGACCATCATCACAAGGA 60.135 52.381 0.00 0.00 0.00 3.36
249 250 2.677902 GCTCGACCATCATCACAAGGAA 60.678 50.000 0.00 0.00 0.00 3.36
250 251 3.801698 CTCGACCATCATCACAAGGAAT 58.198 45.455 0.00 0.00 0.00 3.01
251 252 4.194640 CTCGACCATCATCACAAGGAATT 58.805 43.478 0.00 0.00 0.00 2.17
252 253 3.940852 TCGACCATCATCACAAGGAATTG 59.059 43.478 0.00 0.00 0.00 2.32
253 254 3.488047 CGACCATCATCACAAGGAATTGC 60.488 47.826 0.00 0.00 0.00 3.56
254 255 3.698040 GACCATCATCACAAGGAATTGCT 59.302 43.478 0.00 0.00 0.00 3.91
255 256 4.091549 ACCATCATCACAAGGAATTGCTT 58.908 39.130 6.36 6.36 0.00 3.91
256 257 5.263599 ACCATCATCACAAGGAATTGCTTA 58.736 37.500 12.24 0.00 0.00 3.09
257 258 5.359009 ACCATCATCACAAGGAATTGCTTAG 59.641 40.000 12.24 8.26 0.00 2.18
258 259 5.221185 CCATCATCACAAGGAATTGCTTAGG 60.221 44.000 12.24 7.57 0.00 2.69
259 260 5.178096 TCATCACAAGGAATTGCTTAGGA 57.822 39.130 12.24 12.48 0.00 2.94
260 261 5.759059 TCATCACAAGGAATTGCTTAGGAT 58.241 37.500 12.24 14.06 0.00 3.24
261 262 5.824624 TCATCACAAGGAATTGCTTAGGATC 59.175 40.000 12.24 0.00 0.00 3.36
262 263 4.191544 TCACAAGGAATTGCTTAGGATCG 58.808 43.478 12.24 1.59 0.00 3.69
263 264 2.945668 ACAAGGAATTGCTTAGGATCGC 59.054 45.455 12.24 0.00 0.00 4.58
264 265 3.209410 CAAGGAATTGCTTAGGATCGCT 58.791 45.455 12.24 0.00 0.00 4.93
265 266 3.567478 AGGAATTGCTTAGGATCGCTT 57.433 42.857 0.00 0.00 0.00 4.68
266 267 3.209410 AGGAATTGCTTAGGATCGCTTG 58.791 45.455 0.00 0.00 0.00 4.01
267 268 2.291741 GGAATTGCTTAGGATCGCTTGG 59.708 50.000 0.00 0.00 0.00 3.61
268 269 1.312815 ATTGCTTAGGATCGCTTGGC 58.687 50.000 0.00 0.00 0.00 4.52
279 280 2.870372 GCTTGGCGTGTGGATGAC 59.130 61.111 0.00 0.00 0.00 3.06
280 281 3.027170 GCTTGGCGTGTGGATGACG 62.027 63.158 0.00 0.00 39.87 4.35
285 286 2.815211 CGTGTGGATGACGCTGGG 60.815 66.667 0.00 0.00 32.41 4.45
286 287 2.347490 GTGTGGATGACGCTGGGT 59.653 61.111 0.00 0.00 31.83 4.51
287 288 1.594833 GTGTGGATGACGCTGGGTA 59.405 57.895 0.00 0.00 31.83 3.69
288 289 0.460284 GTGTGGATGACGCTGGGTAG 60.460 60.000 0.00 0.00 31.83 3.18
289 290 0.902984 TGTGGATGACGCTGGGTAGT 60.903 55.000 0.00 0.00 0.00 2.73
290 291 0.249398 GTGGATGACGCTGGGTAGTT 59.751 55.000 0.00 0.00 0.00 2.24
291 292 1.479323 GTGGATGACGCTGGGTAGTTA 59.521 52.381 0.00 0.00 0.00 2.24
292 293 1.754803 TGGATGACGCTGGGTAGTTAG 59.245 52.381 0.00 0.00 0.00 2.34
293 294 2.029623 GGATGACGCTGGGTAGTTAGA 58.970 52.381 0.00 0.00 0.00 2.10
294 295 2.628657 GGATGACGCTGGGTAGTTAGAT 59.371 50.000 0.00 0.00 0.00 1.98
295 296 3.825014 GGATGACGCTGGGTAGTTAGATA 59.175 47.826 0.00 0.00 0.00 1.98
296 297 4.280174 GGATGACGCTGGGTAGTTAGATAA 59.720 45.833 0.00 0.00 0.00 1.75
297 298 5.047235 GGATGACGCTGGGTAGTTAGATAAT 60.047 44.000 0.00 0.00 0.00 1.28
298 299 5.196341 TGACGCTGGGTAGTTAGATAATG 57.804 43.478 0.00 0.00 0.00 1.90
299 300 4.038763 TGACGCTGGGTAGTTAGATAATGG 59.961 45.833 0.00 0.00 0.00 3.16
300 301 4.220724 ACGCTGGGTAGTTAGATAATGGA 58.779 43.478 0.00 0.00 0.00 3.41
301 302 4.281182 ACGCTGGGTAGTTAGATAATGGAG 59.719 45.833 0.00 0.00 0.00 3.86
302 303 4.570930 GCTGGGTAGTTAGATAATGGAGC 58.429 47.826 0.00 0.00 0.00 4.70
303 304 4.284746 GCTGGGTAGTTAGATAATGGAGCT 59.715 45.833 0.00 0.00 0.00 4.09
304 305 5.788450 CTGGGTAGTTAGATAATGGAGCTG 58.212 45.833 0.00 0.00 0.00 4.24
305 306 4.040461 TGGGTAGTTAGATAATGGAGCTGC 59.960 45.833 0.00 0.00 0.00 5.25
306 307 4.284746 GGGTAGTTAGATAATGGAGCTGCT 59.715 45.833 6.82 0.00 0.00 4.24
307 308 5.233988 GGTAGTTAGATAATGGAGCTGCTG 58.766 45.833 7.01 0.00 0.00 4.41
308 309 5.221541 GGTAGTTAGATAATGGAGCTGCTGT 60.222 44.000 7.01 0.00 0.00 4.40
309 310 5.365021 AGTTAGATAATGGAGCTGCTGTT 57.635 39.130 7.01 4.26 0.00 3.16
310 311 5.749462 AGTTAGATAATGGAGCTGCTGTTT 58.251 37.500 7.01 0.00 0.00 2.83
311 312 6.183347 AGTTAGATAATGGAGCTGCTGTTTT 58.817 36.000 7.01 0.00 0.00 2.43
312 313 4.978083 AGATAATGGAGCTGCTGTTTTG 57.022 40.909 7.01 0.00 0.00 2.44
313 314 4.338879 AGATAATGGAGCTGCTGTTTTGT 58.661 39.130 7.01 0.00 0.00 2.83
314 315 4.768968 AGATAATGGAGCTGCTGTTTTGTT 59.231 37.500 7.01 0.00 0.00 2.83
315 316 2.806608 ATGGAGCTGCTGTTTTGTTG 57.193 45.000 7.01 0.00 0.00 3.33
316 317 1.473258 TGGAGCTGCTGTTTTGTTGT 58.527 45.000 7.01 0.00 0.00 3.32
317 318 1.134753 TGGAGCTGCTGTTTTGTTGTG 59.865 47.619 7.01 0.00 0.00 3.33
318 319 1.203065 GAGCTGCTGTTTTGTTGTGC 58.797 50.000 7.01 0.00 0.00 4.57
319 320 0.526096 AGCTGCTGTTTTGTTGTGCG 60.526 50.000 0.00 0.00 0.00 5.34
320 321 0.801836 GCTGCTGTTTTGTTGTGCGT 60.802 50.000 0.00 0.00 0.00 5.24
321 322 0.915904 CTGCTGTTTTGTTGTGCGTG 59.084 50.000 0.00 0.00 0.00 5.34
322 323 0.523519 TGCTGTTTTGTTGTGCGTGA 59.476 45.000 0.00 0.00 0.00 4.35
323 324 1.068264 TGCTGTTTTGTTGTGCGTGAA 60.068 42.857 0.00 0.00 0.00 3.18
324 325 2.192624 GCTGTTTTGTTGTGCGTGAAT 58.807 42.857 0.00 0.00 0.00 2.57
325 326 2.034675 GCTGTTTTGTTGTGCGTGAATG 60.035 45.455 0.00 0.00 0.00 2.67
326 327 3.178267 CTGTTTTGTTGTGCGTGAATGT 58.822 40.909 0.00 0.00 0.00 2.71
327 328 3.579709 TGTTTTGTTGTGCGTGAATGTT 58.420 36.364 0.00 0.00 0.00 2.71
328 329 3.610242 TGTTTTGTTGTGCGTGAATGTTC 59.390 39.130 0.00 0.00 0.00 3.18
329 330 3.773860 TTTGTTGTGCGTGAATGTTCT 57.226 38.095 0.00 0.00 0.00 3.01
330 331 3.332761 TTGTTGTGCGTGAATGTTCTC 57.667 42.857 0.00 0.00 0.00 2.87
331 332 2.284190 TGTTGTGCGTGAATGTTCTCA 58.716 42.857 0.00 0.00 0.00 3.27
332 333 2.877786 TGTTGTGCGTGAATGTTCTCAT 59.122 40.909 0.00 0.00 35.59 2.90
333 334 4.061596 TGTTGTGCGTGAATGTTCTCATA 58.938 39.130 0.00 0.00 33.49 2.15
334 335 4.694982 TGTTGTGCGTGAATGTTCTCATAT 59.305 37.500 0.00 0.00 33.49 1.78
335 336 5.872070 TGTTGTGCGTGAATGTTCTCATATA 59.128 36.000 0.00 0.00 33.49 0.86
336 337 6.035975 TGTTGTGCGTGAATGTTCTCATATAG 59.964 38.462 0.00 0.00 33.49 1.31
337 338 4.507756 TGTGCGTGAATGTTCTCATATAGC 59.492 41.667 0.00 0.00 33.49 2.97
338 339 4.747108 GTGCGTGAATGTTCTCATATAGCT 59.253 41.667 0.00 0.00 33.49 3.32
339 340 4.984785 TGCGTGAATGTTCTCATATAGCTC 59.015 41.667 0.00 0.00 33.49 4.09
340 341 4.387256 GCGTGAATGTTCTCATATAGCTCC 59.613 45.833 0.00 0.00 33.49 4.70
341 342 4.926238 CGTGAATGTTCTCATATAGCTCCC 59.074 45.833 0.00 0.00 33.49 4.30
342 343 5.241662 GTGAATGTTCTCATATAGCTCCCC 58.758 45.833 0.00 0.00 33.49 4.81
343 344 4.021104 TGAATGTTCTCATATAGCTCCCCG 60.021 45.833 0.00 0.00 33.49 5.73
344 345 2.958818 TGTTCTCATATAGCTCCCCGT 58.041 47.619 0.00 0.00 0.00 5.28
345 346 2.891580 TGTTCTCATATAGCTCCCCGTC 59.108 50.000 0.00 0.00 0.00 4.79
346 347 2.891580 GTTCTCATATAGCTCCCCGTCA 59.108 50.000 0.00 0.00 0.00 4.35
347 348 3.238788 TCTCATATAGCTCCCCGTCAA 57.761 47.619 0.00 0.00 0.00 3.18
348 349 3.572642 TCTCATATAGCTCCCCGTCAAA 58.427 45.455 0.00 0.00 0.00 2.69
349 350 3.964688 TCTCATATAGCTCCCCGTCAAAA 59.035 43.478 0.00 0.00 0.00 2.44
350 351 4.407621 TCTCATATAGCTCCCCGTCAAAAA 59.592 41.667 0.00 0.00 0.00 1.94
351 352 4.448210 TCATATAGCTCCCCGTCAAAAAC 58.552 43.478 0.00 0.00 0.00 2.43
352 353 2.871096 ATAGCTCCCCGTCAAAAACA 57.129 45.000 0.00 0.00 0.00 2.83
353 354 2.642154 TAGCTCCCCGTCAAAAACAA 57.358 45.000 0.00 0.00 0.00 2.83
354 355 1.770294 AGCTCCCCGTCAAAAACAAA 58.230 45.000 0.00 0.00 0.00 2.83
355 356 1.681264 AGCTCCCCGTCAAAAACAAAG 59.319 47.619 0.00 0.00 0.00 2.77
356 357 1.407618 GCTCCCCGTCAAAAACAAAGT 59.592 47.619 0.00 0.00 0.00 2.66
357 358 2.159156 GCTCCCCGTCAAAAACAAAGTT 60.159 45.455 0.00 0.00 0.00 2.66
358 359 3.702330 CTCCCCGTCAAAAACAAAGTTC 58.298 45.455 0.00 0.00 0.00 3.01
359 360 3.358118 TCCCCGTCAAAAACAAAGTTCT 58.642 40.909 0.00 0.00 0.00 3.01
360 361 3.379057 TCCCCGTCAAAAACAAAGTTCTC 59.621 43.478 0.00 0.00 0.00 2.87
361 362 3.129638 CCCCGTCAAAAACAAAGTTCTCA 59.870 43.478 0.00 0.00 0.00 3.27
362 363 4.202111 CCCCGTCAAAAACAAAGTTCTCAT 60.202 41.667 0.00 0.00 0.00 2.90
363 364 5.009210 CCCCGTCAAAAACAAAGTTCTCATA 59.991 40.000 0.00 0.00 0.00 2.15
364 365 6.294508 CCCCGTCAAAAACAAAGTTCTCATAT 60.295 38.462 0.00 0.00 0.00 1.78
365 366 7.094549 CCCCGTCAAAAACAAAGTTCTCATATA 60.095 37.037 0.00 0.00 0.00 0.86
366 367 7.962918 CCCGTCAAAAACAAAGTTCTCATATAG 59.037 37.037 0.00 0.00 0.00 1.31
367 368 7.481798 CCGTCAAAAACAAAGTTCTCATATAGC 59.518 37.037 0.00 0.00 0.00 2.97
368 369 8.230486 CGTCAAAAACAAAGTTCTCATATAGCT 58.770 33.333 0.00 0.00 0.00 3.32
371 372 9.994432 CAAAAACAAAGTTCTCATATAGCTAGG 57.006 33.333 0.00 0.00 0.00 3.02
372 373 9.740710 AAAAACAAAGTTCTCATATAGCTAGGT 57.259 29.630 0.00 0.00 0.00 3.08
373 374 9.740710 AAAACAAAGTTCTCATATAGCTAGGTT 57.259 29.630 0.00 0.00 0.00 3.50
374 375 8.723942 AACAAAGTTCTCATATAGCTAGGTTG 57.276 34.615 0.00 0.00 0.00 3.77
375 376 6.763610 ACAAAGTTCTCATATAGCTAGGTTGC 59.236 38.462 0.00 0.00 0.00 4.17
376 377 6.739331 AAGTTCTCATATAGCTAGGTTGCT 57.261 37.500 0.00 0.00 46.11 3.91
377 378 6.339587 AGTTCTCATATAGCTAGGTTGCTC 57.660 41.667 0.00 0.00 42.97 4.26
378 379 6.074648 AGTTCTCATATAGCTAGGTTGCTCT 58.925 40.000 0.00 0.00 42.97 4.09
379 380 6.553100 AGTTCTCATATAGCTAGGTTGCTCTT 59.447 38.462 0.00 0.00 42.97 2.85
380 381 6.582677 TCTCATATAGCTAGGTTGCTCTTC 57.417 41.667 0.00 0.00 42.97 2.87
381 382 6.310941 TCTCATATAGCTAGGTTGCTCTTCT 58.689 40.000 0.00 0.00 42.97 2.85
382 383 6.780031 TCTCATATAGCTAGGTTGCTCTTCTT 59.220 38.462 0.00 0.00 42.97 2.52
383 384 6.987386 TCATATAGCTAGGTTGCTCTTCTTC 58.013 40.000 0.00 0.00 42.97 2.87
384 385 4.681074 ATAGCTAGGTTGCTCTTCTTCC 57.319 45.455 0.00 0.00 42.97 3.46
385 386 2.545810 AGCTAGGTTGCTCTTCTTCCT 58.454 47.619 0.00 0.00 39.34 3.36
386 387 2.909662 AGCTAGGTTGCTCTTCTTCCTT 59.090 45.455 0.00 0.00 39.34 3.36
387 388 3.329225 AGCTAGGTTGCTCTTCTTCCTTT 59.671 43.478 0.00 0.00 39.34 3.11
388 389 3.438434 GCTAGGTTGCTCTTCTTCCTTTG 59.562 47.826 0.00 0.00 0.00 2.77
389 390 2.868899 AGGTTGCTCTTCTTCCTTTGG 58.131 47.619 0.00 0.00 0.00 3.28
390 391 1.270826 GGTTGCTCTTCTTCCTTTGGC 59.729 52.381 0.00 0.00 0.00 4.52
391 392 2.234143 GTTGCTCTTCTTCCTTTGGCT 58.766 47.619 0.00 0.00 0.00 4.75
392 393 2.625314 GTTGCTCTTCTTCCTTTGGCTT 59.375 45.455 0.00 0.00 0.00 4.35
393 394 2.508526 TGCTCTTCTTCCTTTGGCTTC 58.491 47.619 0.00 0.00 0.00 3.86
394 395 2.158623 TGCTCTTCTTCCTTTGGCTTCA 60.159 45.455 0.00 0.00 0.00 3.02
395 396 2.487372 GCTCTTCTTCCTTTGGCTTCAG 59.513 50.000 0.00 0.00 0.00 3.02
396 397 3.080319 CTCTTCTTCCTTTGGCTTCAGG 58.920 50.000 0.00 0.00 0.00 3.86
397 398 1.543358 CTTCTTCCTTTGGCTTCAGGC 59.457 52.381 0.00 0.00 41.50 4.85
398 399 0.773644 TCTTCCTTTGGCTTCAGGCT 59.226 50.000 1.64 0.00 41.69 4.58
399 400 1.145738 TCTTCCTTTGGCTTCAGGCTT 59.854 47.619 1.64 0.00 41.69 4.35
400 401 1.271656 CTTCCTTTGGCTTCAGGCTTG 59.728 52.381 1.64 0.00 41.69 4.01
401 402 0.478072 TCCTTTGGCTTCAGGCTTGA 59.522 50.000 0.00 0.00 41.69 3.02
402 403 1.076024 TCCTTTGGCTTCAGGCTTGAT 59.924 47.619 0.00 0.00 41.69 2.57
403 404 2.308570 TCCTTTGGCTTCAGGCTTGATA 59.691 45.455 0.00 0.00 41.69 2.15
404 405 3.091545 CCTTTGGCTTCAGGCTTGATAA 58.908 45.455 0.00 0.00 41.69 1.75
405 406 3.129988 CCTTTGGCTTCAGGCTTGATAAG 59.870 47.826 0.00 0.00 41.69 1.73
406 407 3.439857 TTGGCTTCAGGCTTGATAAGT 57.560 42.857 0.00 0.00 41.69 2.24
407 408 3.439857 TGGCTTCAGGCTTGATAAGTT 57.560 42.857 0.00 0.00 41.69 2.66
408 409 3.766545 TGGCTTCAGGCTTGATAAGTTT 58.233 40.909 0.00 0.00 41.69 2.66
409 410 3.758554 TGGCTTCAGGCTTGATAAGTTTC 59.241 43.478 0.00 0.00 41.69 2.78
410 411 3.181506 GGCTTCAGGCTTGATAAGTTTCG 60.182 47.826 0.00 0.00 41.46 3.46
411 412 3.437049 GCTTCAGGCTTGATAAGTTTCGT 59.563 43.478 0.00 0.00 38.06 3.85
412 413 4.083271 GCTTCAGGCTTGATAAGTTTCGTT 60.083 41.667 0.00 0.00 38.06 3.85
413 414 5.356882 TTCAGGCTTGATAAGTTTCGTTG 57.643 39.130 0.00 0.00 32.27 4.10
414 415 4.637276 TCAGGCTTGATAAGTTTCGTTGA 58.363 39.130 0.00 0.00 0.00 3.18
415 416 4.690748 TCAGGCTTGATAAGTTTCGTTGAG 59.309 41.667 0.00 0.00 0.00 3.02
416 417 4.690748 CAGGCTTGATAAGTTTCGTTGAGA 59.309 41.667 0.00 0.00 0.00 3.27
417 418 4.932200 AGGCTTGATAAGTTTCGTTGAGAG 59.068 41.667 0.00 0.00 0.00 3.20
418 419 4.929808 GGCTTGATAAGTTTCGTTGAGAGA 59.070 41.667 0.00 0.00 0.00 3.10
419 420 5.062809 GGCTTGATAAGTTTCGTTGAGAGAG 59.937 44.000 0.00 0.00 0.00 3.20
420 421 5.864474 GCTTGATAAGTTTCGTTGAGAGAGA 59.136 40.000 0.00 0.00 0.00 3.10
421 422 6.533367 GCTTGATAAGTTTCGTTGAGAGAGAT 59.467 38.462 0.00 0.00 0.00 2.75
422 423 7.463913 GCTTGATAAGTTTCGTTGAGAGAGATG 60.464 40.741 0.00 0.00 0.00 2.90
423 424 6.925211 TGATAAGTTTCGTTGAGAGAGATGT 58.075 36.000 0.00 0.00 0.00 3.06
424 425 7.378966 TGATAAGTTTCGTTGAGAGAGATGTT 58.621 34.615 0.00 0.00 0.00 2.71
425 426 8.520351 TGATAAGTTTCGTTGAGAGAGATGTTA 58.480 33.333 0.00 0.00 0.00 2.41
426 427 9.355215 GATAAGTTTCGTTGAGAGAGATGTTAA 57.645 33.333 0.00 0.00 0.00 2.01
427 428 9.706691 ATAAGTTTCGTTGAGAGAGATGTTAAA 57.293 29.630 0.00 0.00 0.00 1.52
428 429 7.409465 AGTTTCGTTGAGAGAGATGTTAAAC 57.591 36.000 0.00 0.00 0.00 2.01
429 430 7.210873 AGTTTCGTTGAGAGAGATGTTAAACT 58.789 34.615 0.00 0.00 0.00 2.66
430 431 7.711339 AGTTTCGTTGAGAGAGATGTTAAACTT 59.289 33.333 0.00 0.00 31.38 2.66
431 432 8.336080 GTTTCGTTGAGAGAGATGTTAAACTTT 58.664 33.333 0.00 0.00 0.00 2.66
432 433 7.639162 TCGTTGAGAGAGATGTTAAACTTTC 57.361 36.000 0.00 0.00 0.00 2.62
433 434 7.207383 TCGTTGAGAGAGATGTTAAACTTTCA 58.793 34.615 0.00 0.00 0.00 2.69
434 435 7.382488 TCGTTGAGAGAGATGTTAAACTTTCAG 59.618 37.037 0.00 0.00 0.00 3.02
435 436 7.169982 CGTTGAGAGAGATGTTAAACTTTCAGT 59.830 37.037 0.00 0.00 0.00 3.41
436 437 8.831550 GTTGAGAGAGATGTTAAACTTTCAGTT 58.168 33.333 0.00 0.00 40.80 3.16
438 439 9.396022 TGAGAGAGATGTTAAACTTTCAGTTTT 57.604 29.630 7.17 0.00 45.38 2.43
439 440 9.657121 GAGAGAGATGTTAAACTTTCAGTTTTG 57.343 33.333 7.17 0.00 45.38 2.44
440 441 9.178758 AGAGAGATGTTAAACTTTCAGTTTTGT 57.821 29.630 7.17 0.00 45.38 2.83
457 458 8.450964 TCAGTTTTGTAATAATTCTGCTACAGC 58.549 33.333 0.00 0.00 42.50 4.40
458 459 8.454106 CAGTTTTGTAATAATTCTGCTACAGCT 58.546 33.333 2.44 0.00 42.66 4.24
459 460 9.014297 AGTTTTGTAATAATTCTGCTACAGCTT 57.986 29.630 2.44 0.00 42.66 3.74
460 461 9.278734 GTTTTGTAATAATTCTGCTACAGCTTC 57.721 33.333 2.44 0.00 42.66 3.86
461 462 8.792830 TTTGTAATAATTCTGCTACAGCTTCT 57.207 30.769 2.44 0.00 42.66 2.85
462 463 7.776933 TGTAATAATTCTGCTACAGCTTCTG 57.223 36.000 2.44 0.00 42.66 3.02
464 465 6.917217 AATAATTCTGCTACAGCTTCTGTC 57.083 37.500 2.39 0.00 41.21 3.51
465 466 4.550076 AATTCTGCTACAGCTTCTGTCT 57.450 40.909 2.39 0.00 41.21 3.41
466 467 5.667539 AATTCTGCTACAGCTTCTGTCTA 57.332 39.130 2.39 0.00 41.21 2.59
467 468 4.710423 TTCTGCTACAGCTTCTGTCTAG 57.290 45.455 2.39 0.00 41.21 2.43
468 469 2.425312 TCTGCTACAGCTTCTGTCTAGC 59.575 50.000 12.40 12.40 41.21 3.42
474 475 0.823460 AGCTTCTGTCTAGCTGGAGC 59.177 55.000 0.00 13.05 46.71 4.70
475 476 0.179086 GCTTCTGTCTAGCTGGAGCC 60.179 60.000 0.00 0.00 40.55 4.70
476 477 0.102120 CTTCTGTCTAGCTGGAGCCG 59.898 60.000 0.00 0.00 43.38 5.52
477 478 0.323451 TTCTGTCTAGCTGGAGCCGA 60.323 55.000 0.00 0.00 43.38 5.54
478 479 0.749818 TCTGTCTAGCTGGAGCCGAG 60.750 60.000 0.00 0.00 43.38 4.63
479 480 0.749818 CTGTCTAGCTGGAGCCGAGA 60.750 60.000 0.00 0.00 43.38 4.04
480 481 0.749818 TGTCTAGCTGGAGCCGAGAG 60.750 60.000 0.00 0.00 43.38 3.20
481 482 1.826054 TCTAGCTGGAGCCGAGAGC 60.826 63.158 0.00 0.00 43.38 4.09
491 492 3.516578 GCCGAGAGCTGTTAACAGT 57.483 52.632 30.90 20.09 45.45 3.55
492 493 1.351153 GCCGAGAGCTGTTAACAGTC 58.649 55.000 30.90 25.38 45.45 3.51
493 494 1.997669 CCGAGAGCTGTTAACAGTCC 58.002 55.000 30.90 23.14 45.45 3.85
494 495 1.618861 CGAGAGCTGTTAACAGTCCG 58.381 55.000 30.90 23.91 45.45 4.79
495 496 1.199327 CGAGAGCTGTTAACAGTCCGA 59.801 52.381 30.90 0.00 45.45 4.55
496 497 2.159366 CGAGAGCTGTTAACAGTCCGAT 60.159 50.000 30.90 16.16 45.45 4.18
497 498 3.182967 GAGAGCTGTTAACAGTCCGATG 58.817 50.000 30.90 10.38 45.45 3.84
498 499 2.563179 AGAGCTGTTAACAGTCCGATGT 59.437 45.455 30.90 12.26 45.45 3.06
499 500 2.668457 GAGCTGTTAACAGTCCGATGTG 59.332 50.000 30.90 9.03 45.45 3.21
500 501 1.732259 GCTGTTAACAGTCCGATGTGG 59.268 52.381 30.90 8.36 45.45 4.17
501 502 2.870435 GCTGTTAACAGTCCGATGTGGT 60.870 50.000 30.90 0.00 45.45 4.16
502 503 3.399330 CTGTTAACAGTCCGATGTGGTT 58.601 45.455 24.70 0.00 39.09 3.67
503 504 3.811083 TGTTAACAGTCCGATGTGGTTT 58.189 40.909 3.59 0.00 39.52 3.27
504 505 3.810941 TGTTAACAGTCCGATGTGGTTTC 59.189 43.478 3.59 0.00 39.52 2.78
505 506 1.508632 AACAGTCCGATGTGGTTTCG 58.491 50.000 0.00 0.00 39.52 3.46
506 507 0.949105 ACAGTCCGATGTGGTTTCGC 60.949 55.000 0.00 0.00 39.52 4.70
507 508 1.375523 AGTCCGATGTGGTTTCGCC 60.376 57.895 0.00 0.00 39.52 5.54
508 509 1.375523 GTCCGATGTGGTTTCGCCT 60.376 57.895 0.00 0.00 39.52 5.52
509 510 0.953960 GTCCGATGTGGTTTCGCCTT 60.954 55.000 0.00 0.00 39.52 4.35
510 511 0.250553 TCCGATGTGGTTTCGCCTTT 60.251 50.000 0.00 0.00 39.52 3.11
511 512 0.109781 CCGATGTGGTTTCGCCTTTG 60.110 55.000 0.00 0.00 38.35 2.77
512 513 0.729140 CGATGTGGTTTCGCCTTTGC 60.729 55.000 0.00 0.00 38.35 3.68
513 514 0.598065 GATGTGGTTTCGCCTTTGCT 59.402 50.000 0.00 0.00 38.35 3.91
514 515 1.000274 GATGTGGTTTCGCCTTTGCTT 60.000 47.619 0.00 0.00 38.35 3.91
515 516 0.820871 TGTGGTTTCGCCTTTGCTTT 59.179 45.000 0.00 0.00 38.35 3.51
516 517 1.205893 TGTGGTTTCGCCTTTGCTTTT 59.794 42.857 0.00 0.00 38.35 2.27
517 518 2.276201 GTGGTTTCGCCTTTGCTTTTT 58.724 42.857 0.00 0.00 38.35 1.94
518 519 3.119101 TGTGGTTTCGCCTTTGCTTTTTA 60.119 39.130 0.00 0.00 38.35 1.52
519 520 3.866327 GTGGTTTCGCCTTTGCTTTTTAA 59.134 39.130 0.00 0.00 38.35 1.52
520 521 4.509970 GTGGTTTCGCCTTTGCTTTTTAAT 59.490 37.500 0.00 0.00 38.35 1.40
521 522 5.692654 GTGGTTTCGCCTTTGCTTTTTAATA 59.307 36.000 0.00 0.00 38.35 0.98
522 523 6.201234 GTGGTTTCGCCTTTGCTTTTTAATAA 59.799 34.615 0.00 0.00 38.35 1.40
523 524 6.761714 TGGTTTCGCCTTTGCTTTTTAATAAA 59.238 30.769 0.00 0.00 38.35 1.40
524 525 7.280205 TGGTTTCGCCTTTGCTTTTTAATAAAA 59.720 29.630 0.00 0.00 38.35 1.52
536 537 7.889589 CTTTTTAATAAAAGTTGAGGCAGGG 57.110 36.000 0.00 0.00 43.34 4.45
537 538 5.993748 TTTAATAAAAGTTGAGGCAGGGG 57.006 39.130 0.00 0.00 0.00 4.79
538 539 2.532250 ATAAAAGTTGAGGCAGGGGG 57.468 50.000 0.00 0.00 0.00 5.40
539 540 0.251608 TAAAAGTTGAGGCAGGGGGC 60.252 55.000 0.00 0.00 43.74 5.80
606 607 8.132362 AGAGATAGTGATTTAAACGCTCTAGTG 58.868 37.037 7.00 0.00 0.00 2.74
658 659 4.141959 TGTTGCTTTTCCTTCTTTTCCCTG 60.142 41.667 0.00 0.00 0.00 4.45
694 695 4.020662 ACTCTAGTCCAAAGGAAAGCAGAG 60.021 45.833 10.47 10.47 33.98 3.35
700 701 0.251519 AAAGGAAAGCAGAGCCCCAG 60.252 55.000 0.00 0.00 0.00 4.45
742 743 5.567623 CGATCCTACGATCCATCCTTTTCAT 60.568 44.000 0.00 0.00 41.77 2.57
753 754 3.665745 TCCTTTTCATCAGCAAAAGCC 57.334 42.857 1.65 0.00 38.86 4.35
780 781 3.044986 CAGAATGTTTTCTTGCCACACG 58.955 45.455 0.00 0.00 40.28 4.49
781 782 1.786579 GAATGTTTTCTTGCCACACGC 59.213 47.619 0.00 0.00 38.31 5.34
782 783 0.031994 ATGTTTTCTTGCCACACGCC 59.968 50.000 0.00 0.00 36.24 5.68
783 784 1.299850 GTTTTCTTGCCACACGCCC 60.300 57.895 0.00 0.00 36.24 6.13
784 785 1.754621 TTTTCTTGCCACACGCCCA 60.755 52.632 0.00 0.00 36.24 5.36
785 786 2.010582 TTTTCTTGCCACACGCCCAC 62.011 55.000 0.00 0.00 36.24 4.61
786 787 3.705934 TTCTTGCCACACGCCCACA 62.706 57.895 0.00 0.00 36.24 4.17
850 863 3.390135 CACGCTTTTCTCTAGAACACCA 58.610 45.455 0.00 0.00 33.13 4.17
985 1003 5.803461 TCGACTCCTGTCATTTATTACAACG 59.197 40.000 0.00 0.00 43.06 4.10
986 1004 5.575606 CGACTCCTGTCATTTATTACAACGT 59.424 40.000 0.00 0.00 43.06 3.99
987 1005 6.453791 CGACTCCTGTCATTTATTACAACGTG 60.454 42.308 0.00 0.00 43.06 4.49
988 1006 6.228258 ACTCCTGTCATTTATTACAACGTGT 58.772 36.000 0.00 0.00 0.00 4.49
989 1007 6.708949 ACTCCTGTCATTTATTACAACGTGTT 59.291 34.615 0.00 0.00 0.00 3.32
990 1008 7.227910 ACTCCTGTCATTTATTACAACGTGTTT 59.772 33.333 0.00 0.00 0.00 2.83
991 1009 7.932335 TCCTGTCATTTATTACAACGTGTTTT 58.068 30.769 0.00 0.00 0.00 2.43
992 1010 8.071368 TCCTGTCATTTATTACAACGTGTTTTC 58.929 33.333 0.00 0.00 0.00 2.29
1031 1049 1.365368 GCAGCTTTCTTCCTCCTCGC 61.365 60.000 0.00 0.00 0.00 5.03
1259 1286 3.201290 TGATCGACTTCCTAGGTACGTC 58.799 50.000 9.08 12.26 0.00 4.34
1260 1287 1.645034 TCGACTTCCTAGGTACGTCG 58.355 55.000 28.07 28.07 46.17 5.12
1261 1288 1.066858 TCGACTTCCTAGGTACGTCGT 60.067 52.381 30.15 2.21 45.33 4.34
1263 1290 2.282820 CGACTTCCTAGGTACGTCGTAC 59.717 54.545 26.80 24.23 41.60 3.67
1264 1291 3.262420 GACTTCCTAGGTACGTCGTACA 58.738 50.000 30.72 14.83 40.41 2.90
1294 1321 1.135575 GCAATGTTTCTCAAGCTCCGG 60.136 52.381 0.00 0.00 0.00 5.14
1346 1393 3.302365 TGGTACTGCACGTAGTAAACC 57.698 47.619 0.00 2.26 41.61 3.27
1649 1752 2.095853 AGTGCACACTCTGTTTTCAACG 59.904 45.455 21.04 0.00 36.92 4.10
1847 1966 1.134907 CGACGCCACCAAGGTACTAAT 60.135 52.381 0.00 0.00 38.49 1.73
1885 2009 1.736126 TCTCTTACACGTACGGCTCAG 59.264 52.381 21.06 10.06 0.00 3.35
2066 2219 2.048222 CTCAACCTCTTCGCCGCA 60.048 61.111 0.00 0.00 0.00 5.69
2353 2582 4.752879 GCAGGCGGCGTACAAGGA 62.753 66.667 9.37 0.00 0.00 3.36
2354 2583 2.047655 CAGGCGGCGTACAAGGAA 60.048 61.111 9.37 0.00 0.00 3.36
2410 2640 0.461548 CCGCAGATACTCAGCTTCCA 59.538 55.000 0.00 0.00 0.00 3.53
2442 2692 2.421424 GGGCAGACATGATGAAACTGTC 59.579 50.000 0.00 7.20 39.63 3.51
2447 2697 5.745312 AGACATGATGAAACTGTCTGGTA 57.255 39.130 0.00 0.00 45.85 3.25
2452 2702 5.545063 TGATGAAACTGTCTGGTACTTCA 57.455 39.130 0.00 0.00 0.00 3.02
2453 2703 6.114187 TGATGAAACTGTCTGGTACTTCAT 57.886 37.500 3.23 3.23 36.48 2.57
2454 2704 5.934043 TGATGAAACTGTCTGGTACTTCATG 59.066 40.000 7.27 0.00 34.52 3.07
2455 2705 4.641396 TGAAACTGTCTGGTACTTCATGG 58.359 43.478 0.00 0.00 0.00 3.66
2486 2864 0.454957 CCGCGACATTTTGAGCCTTG 60.455 55.000 8.23 0.00 0.00 3.61
2503 2881 2.028112 CCTTGGACGAGTTCTTCCATGA 60.028 50.000 17.02 1.95 42.77 3.07
2504 2882 3.257393 CTTGGACGAGTTCTTCCATGAG 58.743 50.000 12.46 4.14 42.77 2.90
2505 2883 1.550524 TGGACGAGTTCTTCCATGAGG 59.449 52.381 3.45 0.00 39.07 3.86
2506 2884 1.825474 GGACGAGTTCTTCCATGAGGA 59.175 52.381 0.00 0.00 43.93 3.71
2512 2900 4.098654 CGAGTTCTTCCATGAGGACTATGT 59.901 45.833 0.00 0.00 45.73 2.29
2550 2938 5.696270 TGCGCTATGTATCCAGATTAAACTG 59.304 40.000 9.73 5.78 37.61 3.16
2678 3074 8.639761 AGTTGATCTAGTACACAGTTACAAACT 58.360 33.333 0.00 0.00 44.06 2.66
2721 3121 5.677319 AGTTACTGCATAAGAGTGGCTTA 57.323 39.130 0.00 0.00 42.92 3.09
2749 3149 4.009675 GGTATGTTTGCCTCAGTTCATGA 58.990 43.478 0.00 0.00 36.21 3.07
2780 3693 4.649674 TGAGAGTACGAGGGCAAATCTTAT 59.350 41.667 0.00 0.00 0.00 1.73
2784 3697 3.127425 ACGAGGGCAAATCTTATAGGC 57.873 47.619 0.00 0.00 0.00 3.93
2855 3773 8.028938 GCTAAGATTTAACAGCCTTGATTTGAA 58.971 33.333 0.00 0.00 0.00 2.69
2945 3863 3.113322 GCAAAGTTCTTTGAAACGGGAC 58.887 45.455 23.80 5.00 33.95 4.46
3081 3999 7.400439 TCTCAGAGGAAGAAATGATGAAATGT 58.600 34.615 0.00 0.00 0.00 2.71
3122 4051 0.539051 ATCAAGGAGTTCTCGCTGGG 59.461 55.000 0.00 0.00 0.00 4.45
3127 4056 0.530870 GGAGTTCTCGCTGGGTATGC 60.531 60.000 0.00 0.00 0.00 3.14
3143 4072 3.261137 GGTATGCCCATAAGTACTCCCTC 59.739 52.174 0.00 0.00 0.00 4.30
3144 4073 1.802553 TGCCCATAAGTACTCCCTCC 58.197 55.000 0.00 0.00 0.00 4.30
3145 4074 0.680061 GCCCATAAGTACTCCCTCCG 59.320 60.000 0.00 0.00 0.00 4.63
3146 4075 2.033208 GCCCATAAGTACTCCCTCCGT 61.033 57.143 0.00 0.00 0.00 4.69
3147 4076 2.395619 CCCATAAGTACTCCCTCCGTT 58.604 52.381 0.00 0.00 0.00 4.44
3148 4077 2.364647 CCCATAAGTACTCCCTCCGTTC 59.635 54.545 0.00 0.00 0.00 3.95
3149 4078 2.364647 CCATAAGTACTCCCTCCGTTCC 59.635 54.545 0.00 0.00 0.00 3.62
3150 4079 2.905415 TAAGTACTCCCTCCGTTCCA 57.095 50.000 0.00 0.00 0.00 3.53
3151 4080 2.019807 AAGTACTCCCTCCGTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
3152 4081 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
3153 4082 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
3154 4083 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
3155 4084 4.098894 AGTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
3156 4085 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
3157 4086 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
3158 4087 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
3159 4088 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
3160 4089 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
3161 4090 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
3162 4091 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
3163 4092 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
3164 4093 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
3165 4094 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
3166 4095 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
3167 4096 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
3168 4097 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
3169 4098 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
3170 4099 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
3171 4100 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
3172 4101 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
3173 4102 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
3174 4103 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
3175 4104 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
3176 4105 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
3177 4106 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
3178 4107 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
3179 4108 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
3180 4109 7.287810 AGATGACCCAACTTTGTACTAACTTT 58.712 34.615 0.00 0.00 0.00 2.66
3181 4110 8.434392 AGATGACCCAACTTTGTACTAACTTTA 58.566 33.333 0.00 0.00 0.00 1.85
3182 4111 8.617290 ATGACCCAACTTTGTACTAACTTTAG 57.383 34.615 0.00 0.00 36.82 1.85
3183 4112 7.567458 TGACCCAACTTTGTACTAACTTTAGT 58.433 34.615 6.85 6.85 45.39 2.24
3184 4113 8.703743 TGACCCAACTTTGTACTAACTTTAGTA 58.296 33.333 4.98 4.98 43.36 1.82
3198 4127 8.215736 ACTAACTTTAGTACAAAGTTGGGTCAT 58.784 33.333 28.62 17.19 46.38 3.06
3199 4128 7.506328 AACTTTAGTACAAAGTTGGGTCATC 57.494 36.000 23.48 0.00 45.58 2.92
3200 4129 6.838382 ACTTTAGTACAAAGTTGGGTCATCT 58.162 36.000 14.04 0.00 37.18 2.90
3201 4130 7.970102 ACTTTAGTACAAAGTTGGGTCATCTA 58.030 34.615 14.04 0.00 37.18 1.98
3202 4131 8.603304 ACTTTAGTACAAAGTTGGGTCATCTAT 58.397 33.333 14.04 0.00 37.18 1.98
3203 4132 9.449719 CTTTAGTACAAAGTTGGGTCATCTATT 57.550 33.333 0.00 0.00 0.00 1.73
3204 4133 9.802039 TTTAGTACAAAGTTGGGTCATCTATTT 57.198 29.630 0.00 0.00 0.00 1.40
3205 4134 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
3207 4136 9.449719 AGTACAAAGTTGGGTCATCTATTTTAG 57.550 33.333 0.00 0.00 0.00 1.85
3208 4137 9.444600 GTACAAAGTTGGGTCATCTATTTTAGA 57.555 33.333 0.00 0.00 39.50 2.10
3209 4138 8.934023 ACAAAGTTGGGTCATCTATTTTAGAA 57.066 30.769 0.00 0.00 38.50 2.10
3210 4139 8.793592 ACAAAGTTGGGTCATCTATTTTAGAAC 58.206 33.333 0.00 0.00 38.50 3.01
3211 4140 7.611213 AAGTTGGGTCATCTATTTTAGAACG 57.389 36.000 0.00 0.00 38.50 3.95
3212 4141 6.113411 AGTTGGGTCATCTATTTTAGAACGG 58.887 40.000 0.00 0.00 38.50 4.44
3213 4142 5.943349 TGGGTCATCTATTTTAGAACGGA 57.057 39.130 0.00 0.00 38.50 4.69
3214 4143 5.914033 TGGGTCATCTATTTTAGAACGGAG 58.086 41.667 0.00 0.00 38.50 4.63
3215 4144 5.163343 TGGGTCATCTATTTTAGAACGGAGG 60.163 44.000 0.00 0.00 38.50 4.30
3216 4145 5.298347 GGTCATCTATTTTAGAACGGAGGG 58.702 45.833 0.00 0.00 38.50 4.30
3217 4146 5.070047 GGTCATCTATTTTAGAACGGAGGGA 59.930 44.000 0.00 0.00 38.50 4.20
3218 4147 6.217294 GTCATCTATTTTAGAACGGAGGGAG 58.783 44.000 0.00 0.00 38.50 4.30
3219 4148 5.897824 TCATCTATTTTAGAACGGAGGGAGT 59.102 40.000 0.00 0.00 38.50 3.85
3220 4149 7.014038 GTCATCTATTTTAGAACGGAGGGAGTA 59.986 40.741 0.00 0.00 38.50 2.59
3221 4150 7.728981 TCATCTATTTTAGAACGGAGGGAGTAT 59.271 37.037 0.00 0.00 38.50 2.12
3222 4151 9.021807 CATCTATTTTAGAACGGAGGGAGTATA 57.978 37.037 0.00 0.00 38.50 1.47
3356 4318 9.639563 TCTAAACATGCTGGGATGAAATAATAA 57.360 29.630 8.97 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 8.977267 CTTCTTCCAGAAGGAGATAAATGAAT 57.023 34.615 9.76 0.00 46.03 2.57
44 45 9.160412 AGGTAGCACCAGAGACTAAATTAATAT 57.840 33.333 7.86 0.00 41.95 1.28
62 63 4.202367 ACCATAAGCTCCATAAGGTAGCAC 60.202 45.833 9.91 0.00 39.23 4.40
201 202 2.050895 CATCGGAGGAGTAGCGCG 60.051 66.667 0.00 0.00 0.00 6.86
244 245 3.567478 AGCGATCCTAAGCAATTCCTT 57.433 42.857 0.00 0.00 35.48 3.36
245 246 3.209410 CAAGCGATCCTAAGCAATTCCT 58.791 45.455 0.00 0.00 35.48 3.36
246 247 2.291741 CCAAGCGATCCTAAGCAATTCC 59.708 50.000 0.00 0.00 35.48 3.01
247 248 2.287248 GCCAAGCGATCCTAAGCAATTC 60.287 50.000 0.00 0.00 35.48 2.17
248 249 1.678101 GCCAAGCGATCCTAAGCAATT 59.322 47.619 0.00 0.00 35.48 2.32
249 250 1.312815 GCCAAGCGATCCTAAGCAAT 58.687 50.000 0.00 0.00 35.48 3.56
250 251 2.780595 GCCAAGCGATCCTAAGCAA 58.219 52.632 0.00 0.00 35.48 3.91
251 252 4.540153 GCCAAGCGATCCTAAGCA 57.460 55.556 0.00 0.00 35.48 3.91
262 263 2.870372 GTCATCCACACGCCAAGC 59.130 61.111 0.00 0.00 0.00 4.01
263 264 3.168271 CGTCATCCACACGCCAAG 58.832 61.111 0.00 0.00 0.00 3.61
268 269 2.220615 TACCCAGCGTCATCCACACG 62.221 60.000 0.00 0.00 40.35 4.49
269 270 0.460284 CTACCCAGCGTCATCCACAC 60.460 60.000 0.00 0.00 0.00 3.82
270 271 0.902984 ACTACCCAGCGTCATCCACA 60.903 55.000 0.00 0.00 0.00 4.17
271 272 0.249398 AACTACCCAGCGTCATCCAC 59.751 55.000 0.00 0.00 0.00 4.02
272 273 1.754803 CTAACTACCCAGCGTCATCCA 59.245 52.381 0.00 0.00 0.00 3.41
273 274 2.029623 TCTAACTACCCAGCGTCATCC 58.970 52.381 0.00 0.00 0.00 3.51
274 275 5.449107 TTATCTAACTACCCAGCGTCATC 57.551 43.478 0.00 0.00 0.00 2.92
275 276 5.279506 CCATTATCTAACTACCCAGCGTCAT 60.280 44.000 0.00 0.00 0.00 3.06
276 277 4.038763 CCATTATCTAACTACCCAGCGTCA 59.961 45.833 0.00 0.00 0.00 4.35
277 278 4.280174 TCCATTATCTAACTACCCAGCGTC 59.720 45.833 0.00 0.00 0.00 5.19
278 279 4.220724 TCCATTATCTAACTACCCAGCGT 58.779 43.478 0.00 0.00 0.00 5.07
279 280 4.810790 CTCCATTATCTAACTACCCAGCG 58.189 47.826 0.00 0.00 0.00 5.18
280 281 4.284746 AGCTCCATTATCTAACTACCCAGC 59.715 45.833 0.00 0.00 0.00 4.85
281 282 5.788450 CAGCTCCATTATCTAACTACCCAG 58.212 45.833 0.00 0.00 0.00 4.45
282 283 4.040461 GCAGCTCCATTATCTAACTACCCA 59.960 45.833 0.00 0.00 0.00 4.51
283 284 4.284746 AGCAGCTCCATTATCTAACTACCC 59.715 45.833 0.00 0.00 0.00 3.69
284 285 5.221541 ACAGCAGCTCCATTATCTAACTACC 60.222 44.000 0.00 0.00 0.00 3.18
285 286 5.848406 ACAGCAGCTCCATTATCTAACTAC 58.152 41.667 0.00 0.00 0.00 2.73
286 287 6.485830 AACAGCAGCTCCATTATCTAACTA 57.514 37.500 0.00 0.00 0.00 2.24
287 288 5.365021 AACAGCAGCTCCATTATCTAACT 57.635 39.130 0.00 0.00 0.00 2.24
288 289 6.127897 ACAAAACAGCAGCTCCATTATCTAAC 60.128 38.462 0.00 0.00 0.00 2.34
289 290 5.945784 ACAAAACAGCAGCTCCATTATCTAA 59.054 36.000 0.00 0.00 0.00 2.10
290 291 5.500234 ACAAAACAGCAGCTCCATTATCTA 58.500 37.500 0.00 0.00 0.00 1.98
291 292 4.338879 ACAAAACAGCAGCTCCATTATCT 58.661 39.130 0.00 0.00 0.00 1.98
292 293 4.708726 ACAAAACAGCAGCTCCATTATC 57.291 40.909 0.00 0.00 0.00 1.75
293 294 4.281688 ACAACAAAACAGCAGCTCCATTAT 59.718 37.500 0.00 0.00 0.00 1.28
294 295 3.636300 ACAACAAAACAGCAGCTCCATTA 59.364 39.130 0.00 0.00 0.00 1.90
295 296 2.431782 ACAACAAAACAGCAGCTCCATT 59.568 40.909 0.00 0.00 0.00 3.16
296 297 2.034124 ACAACAAAACAGCAGCTCCAT 58.966 42.857 0.00 0.00 0.00 3.41
297 298 1.134753 CACAACAAAACAGCAGCTCCA 59.865 47.619 0.00 0.00 0.00 3.86
298 299 1.843992 CACAACAAAACAGCAGCTCC 58.156 50.000 0.00 0.00 0.00 4.70
299 300 1.203065 GCACAACAAAACAGCAGCTC 58.797 50.000 0.00 0.00 0.00 4.09
300 301 0.526096 CGCACAACAAAACAGCAGCT 60.526 50.000 0.00 0.00 0.00 4.24
301 302 0.801836 ACGCACAACAAAACAGCAGC 60.802 50.000 0.00 0.00 0.00 5.25
302 303 0.915904 CACGCACAACAAAACAGCAG 59.084 50.000 0.00 0.00 0.00 4.24
303 304 0.523519 TCACGCACAACAAAACAGCA 59.476 45.000 0.00 0.00 0.00 4.41
304 305 1.623359 TTCACGCACAACAAAACAGC 58.377 45.000 0.00 0.00 0.00 4.40
305 306 3.178267 ACATTCACGCACAACAAAACAG 58.822 40.909 0.00 0.00 0.00 3.16
306 307 3.223423 ACATTCACGCACAACAAAACA 57.777 38.095 0.00 0.00 0.00 2.83
307 308 3.857093 AGAACATTCACGCACAACAAAAC 59.143 39.130 0.00 0.00 0.00 2.43
308 309 4.101942 GAGAACATTCACGCACAACAAAA 58.898 39.130 0.00 0.00 0.00 2.44
309 310 3.127721 TGAGAACATTCACGCACAACAAA 59.872 39.130 0.00 0.00 0.00 2.83
310 311 2.680339 TGAGAACATTCACGCACAACAA 59.320 40.909 0.00 0.00 0.00 2.83
311 312 2.284190 TGAGAACATTCACGCACAACA 58.716 42.857 0.00 0.00 0.00 3.33
312 313 3.542712 ATGAGAACATTCACGCACAAC 57.457 42.857 0.00 0.00 32.21 3.32
313 314 5.006649 GCTATATGAGAACATTCACGCACAA 59.993 40.000 0.00 0.00 37.87 3.33
314 315 4.507756 GCTATATGAGAACATTCACGCACA 59.492 41.667 0.00 0.00 37.87 4.57
315 316 4.747108 AGCTATATGAGAACATTCACGCAC 59.253 41.667 0.00 0.00 37.87 5.34
316 317 4.948847 AGCTATATGAGAACATTCACGCA 58.051 39.130 0.00 0.00 37.87 5.24
317 318 4.387256 GGAGCTATATGAGAACATTCACGC 59.613 45.833 0.00 0.00 37.87 5.34
318 319 4.926238 GGGAGCTATATGAGAACATTCACG 59.074 45.833 0.00 0.00 37.87 4.35
319 320 5.241662 GGGGAGCTATATGAGAACATTCAC 58.758 45.833 0.00 0.00 37.87 3.18
320 321 4.021104 CGGGGAGCTATATGAGAACATTCA 60.021 45.833 0.00 0.00 37.87 2.57
321 322 4.021016 ACGGGGAGCTATATGAGAACATTC 60.021 45.833 0.00 0.00 37.87 2.67
322 323 3.904339 ACGGGGAGCTATATGAGAACATT 59.096 43.478 0.00 0.00 37.87 2.71
323 324 3.511477 ACGGGGAGCTATATGAGAACAT 58.489 45.455 0.00 0.00 40.16 2.71
324 325 2.891580 GACGGGGAGCTATATGAGAACA 59.108 50.000 0.00 0.00 0.00 3.18
325 326 2.891580 TGACGGGGAGCTATATGAGAAC 59.108 50.000 0.00 0.00 0.00 3.01
326 327 3.238788 TGACGGGGAGCTATATGAGAA 57.761 47.619 0.00 0.00 0.00 2.87
327 328 2.971901 TGACGGGGAGCTATATGAGA 57.028 50.000 0.00 0.00 0.00 3.27
328 329 4.336889 TTTTGACGGGGAGCTATATGAG 57.663 45.455 0.00 0.00 0.00 2.90
329 330 4.080807 TGTTTTTGACGGGGAGCTATATGA 60.081 41.667 0.00 0.00 0.00 2.15
330 331 4.196193 TGTTTTTGACGGGGAGCTATATG 58.804 43.478 0.00 0.00 0.00 1.78
331 332 4.497291 TGTTTTTGACGGGGAGCTATAT 57.503 40.909 0.00 0.00 0.00 0.86
332 333 3.985019 TGTTTTTGACGGGGAGCTATA 57.015 42.857 0.00 0.00 0.00 1.31
333 334 2.871096 TGTTTTTGACGGGGAGCTAT 57.129 45.000 0.00 0.00 0.00 2.97
334 335 2.642154 TTGTTTTTGACGGGGAGCTA 57.358 45.000 0.00 0.00 0.00 3.32
335 336 1.681264 CTTTGTTTTTGACGGGGAGCT 59.319 47.619 0.00 0.00 0.00 4.09
336 337 1.407618 ACTTTGTTTTTGACGGGGAGC 59.592 47.619 0.00 0.00 0.00 4.70
337 338 3.380320 AGAACTTTGTTTTTGACGGGGAG 59.620 43.478 0.00 0.00 0.00 4.30
338 339 3.358118 AGAACTTTGTTTTTGACGGGGA 58.642 40.909 0.00 0.00 0.00 4.81
339 340 3.129638 TGAGAACTTTGTTTTTGACGGGG 59.870 43.478 0.00 0.00 0.00 5.73
340 341 4.364415 TGAGAACTTTGTTTTTGACGGG 57.636 40.909 0.00 0.00 0.00 5.28
341 342 7.481798 GCTATATGAGAACTTTGTTTTTGACGG 59.518 37.037 0.00 0.00 0.00 4.79
342 343 8.230486 AGCTATATGAGAACTTTGTTTTTGACG 58.770 33.333 0.00 0.00 0.00 4.35
345 346 9.994432 CCTAGCTATATGAGAACTTTGTTTTTG 57.006 33.333 0.00 0.00 0.00 2.44
346 347 9.740710 ACCTAGCTATATGAGAACTTTGTTTTT 57.259 29.630 0.00 0.00 0.00 1.94
347 348 9.740710 AACCTAGCTATATGAGAACTTTGTTTT 57.259 29.630 0.00 0.00 0.00 2.43
348 349 9.167311 CAACCTAGCTATATGAGAACTTTGTTT 57.833 33.333 0.00 0.00 0.00 2.83
349 350 7.281100 GCAACCTAGCTATATGAGAACTTTGTT 59.719 37.037 0.00 0.00 0.00 2.83
350 351 6.763610 GCAACCTAGCTATATGAGAACTTTGT 59.236 38.462 0.00 0.00 0.00 2.83
351 352 6.989169 AGCAACCTAGCTATATGAGAACTTTG 59.011 38.462 0.00 0.00 44.50 2.77
352 353 7.070571 AGAGCAACCTAGCTATATGAGAACTTT 59.929 37.037 0.00 0.00 46.75 2.66
353 354 6.553100 AGAGCAACCTAGCTATATGAGAACTT 59.447 38.462 0.00 0.00 46.75 2.66
354 355 6.074648 AGAGCAACCTAGCTATATGAGAACT 58.925 40.000 0.00 0.00 46.75 3.01
355 356 6.339587 AGAGCAACCTAGCTATATGAGAAC 57.660 41.667 0.00 0.00 46.75 3.01
356 357 6.780031 AGAAGAGCAACCTAGCTATATGAGAA 59.220 38.462 0.00 0.00 46.75 2.87
357 358 6.310941 AGAAGAGCAACCTAGCTATATGAGA 58.689 40.000 0.00 0.00 46.75 3.27
358 359 6.588719 AGAAGAGCAACCTAGCTATATGAG 57.411 41.667 0.00 0.00 46.75 2.90
359 360 6.015010 GGAAGAAGAGCAACCTAGCTATATGA 60.015 42.308 0.00 0.00 46.75 2.15
360 361 6.014669 AGGAAGAAGAGCAACCTAGCTATATG 60.015 42.308 0.00 0.00 46.75 1.78
361 362 6.081356 AGGAAGAAGAGCAACCTAGCTATAT 58.919 40.000 0.00 0.00 46.75 0.86
362 363 5.459505 AGGAAGAAGAGCAACCTAGCTATA 58.540 41.667 0.00 0.00 46.75 1.31
363 364 4.294347 AGGAAGAAGAGCAACCTAGCTAT 58.706 43.478 0.00 0.00 46.75 2.97
364 365 3.714144 AGGAAGAAGAGCAACCTAGCTA 58.286 45.455 0.00 0.00 46.75 3.32
366 367 3.342377 AAGGAAGAAGAGCAACCTAGC 57.658 47.619 0.00 0.00 0.00 3.42
367 368 4.006319 CCAAAGGAAGAAGAGCAACCTAG 58.994 47.826 0.00 0.00 0.00 3.02
368 369 3.810743 GCCAAAGGAAGAAGAGCAACCTA 60.811 47.826 0.00 0.00 0.00 3.08
369 370 2.868899 CCAAAGGAAGAAGAGCAACCT 58.131 47.619 0.00 0.00 0.00 3.50
370 371 1.270826 GCCAAAGGAAGAAGAGCAACC 59.729 52.381 0.00 0.00 0.00 3.77
371 372 2.234143 AGCCAAAGGAAGAAGAGCAAC 58.766 47.619 0.00 0.00 0.00 4.17
372 373 2.664402 AGCCAAAGGAAGAAGAGCAA 57.336 45.000 0.00 0.00 0.00 3.91
373 374 2.158623 TGAAGCCAAAGGAAGAAGAGCA 60.159 45.455 0.00 0.00 0.00 4.26
374 375 2.487372 CTGAAGCCAAAGGAAGAAGAGC 59.513 50.000 0.00 0.00 0.00 4.09
375 376 3.080319 CCTGAAGCCAAAGGAAGAAGAG 58.920 50.000 0.00 0.00 35.40 2.85
376 377 2.815589 GCCTGAAGCCAAAGGAAGAAGA 60.816 50.000 0.47 0.00 35.40 2.87
377 378 1.543358 GCCTGAAGCCAAAGGAAGAAG 59.457 52.381 0.47 0.00 35.40 2.85
378 379 1.145738 AGCCTGAAGCCAAAGGAAGAA 59.854 47.619 0.47 0.00 45.47 2.52
379 380 0.773644 AGCCTGAAGCCAAAGGAAGA 59.226 50.000 0.47 0.00 45.47 2.87
380 381 1.271656 CAAGCCTGAAGCCAAAGGAAG 59.728 52.381 0.47 0.00 45.47 3.46
381 382 1.133513 TCAAGCCTGAAGCCAAAGGAA 60.134 47.619 0.47 0.00 45.47 3.36
382 383 0.478072 TCAAGCCTGAAGCCAAAGGA 59.522 50.000 0.47 0.00 45.47 3.36
383 384 1.553706 ATCAAGCCTGAAGCCAAAGG 58.446 50.000 0.00 0.00 45.47 3.11
384 385 3.760684 ACTTATCAAGCCTGAAGCCAAAG 59.239 43.478 0.00 0.00 45.47 2.77
385 386 3.766545 ACTTATCAAGCCTGAAGCCAAA 58.233 40.909 0.00 0.00 45.47 3.28
386 387 3.439857 ACTTATCAAGCCTGAAGCCAA 57.560 42.857 0.00 0.00 45.47 4.52
387 388 3.439857 AACTTATCAAGCCTGAAGCCA 57.560 42.857 0.00 0.00 45.47 4.75
388 389 3.181506 CGAAACTTATCAAGCCTGAAGCC 60.182 47.826 0.00 0.00 45.47 4.35
389 390 3.437049 ACGAAACTTATCAAGCCTGAAGC 59.563 43.478 0.00 0.00 44.25 3.86
390 391 5.179368 TCAACGAAACTTATCAAGCCTGAAG 59.821 40.000 0.00 0.00 34.49 3.02
391 392 5.060506 TCAACGAAACTTATCAAGCCTGAA 58.939 37.500 0.00 0.00 34.49 3.02
392 393 4.637276 TCAACGAAACTTATCAAGCCTGA 58.363 39.130 0.00 0.00 35.56 3.86
393 394 4.690748 TCTCAACGAAACTTATCAAGCCTG 59.309 41.667 0.00 0.00 0.00 4.85
394 395 4.894784 TCTCAACGAAACTTATCAAGCCT 58.105 39.130 0.00 0.00 0.00 4.58
395 396 4.929808 TCTCTCAACGAAACTTATCAAGCC 59.070 41.667 0.00 0.00 0.00 4.35
396 397 5.864474 TCTCTCTCAACGAAACTTATCAAGC 59.136 40.000 0.00 0.00 0.00 4.01
397 398 7.543868 ACATCTCTCTCAACGAAACTTATCAAG 59.456 37.037 0.00 0.00 0.00 3.02
398 399 7.378966 ACATCTCTCTCAACGAAACTTATCAA 58.621 34.615 0.00 0.00 0.00 2.57
399 400 6.925211 ACATCTCTCTCAACGAAACTTATCA 58.075 36.000 0.00 0.00 0.00 2.15
400 401 7.820044 AACATCTCTCTCAACGAAACTTATC 57.180 36.000 0.00 0.00 0.00 1.75
401 402 9.706691 TTTAACATCTCTCTCAACGAAACTTAT 57.293 29.630 0.00 0.00 0.00 1.73
402 403 8.975439 GTTTAACATCTCTCTCAACGAAACTTA 58.025 33.333 0.00 0.00 0.00 2.24
403 404 7.711339 AGTTTAACATCTCTCTCAACGAAACTT 59.289 33.333 0.00 0.00 31.24 2.66
404 405 7.210873 AGTTTAACATCTCTCTCAACGAAACT 58.789 34.615 0.00 0.00 0.00 2.66
405 406 7.409465 AGTTTAACATCTCTCTCAACGAAAC 57.591 36.000 0.00 0.00 0.00 2.78
406 407 8.433421 AAAGTTTAACATCTCTCTCAACGAAA 57.567 30.769 0.00 0.00 0.00 3.46
407 408 7.709182 TGAAAGTTTAACATCTCTCTCAACGAA 59.291 33.333 0.00 0.00 0.00 3.85
408 409 7.207383 TGAAAGTTTAACATCTCTCTCAACGA 58.793 34.615 0.00 0.00 0.00 3.85
409 410 7.408132 TGAAAGTTTAACATCTCTCTCAACG 57.592 36.000 0.00 0.00 0.00 4.10
431 432 8.450964 GCTGTAGCAGAATTATTACAAAACTGA 58.549 33.333 0.00 0.00 41.59 3.41
432 433 8.454106 AGCTGTAGCAGAATTATTACAAAACTG 58.546 33.333 6.65 0.00 45.16 3.16
433 434 8.567285 AGCTGTAGCAGAATTATTACAAAACT 57.433 30.769 6.65 0.00 45.16 2.66
434 435 9.278734 GAAGCTGTAGCAGAATTATTACAAAAC 57.721 33.333 6.65 0.00 45.16 2.43
435 436 9.231297 AGAAGCTGTAGCAGAATTATTACAAAA 57.769 29.630 6.65 0.00 45.16 2.44
436 437 8.668353 CAGAAGCTGTAGCAGAATTATTACAAA 58.332 33.333 6.65 0.00 45.16 2.83
437 438 7.824289 ACAGAAGCTGTAGCAGAATTATTACAA 59.176 33.333 6.65 0.00 43.46 2.41
438 439 7.331026 ACAGAAGCTGTAGCAGAATTATTACA 58.669 34.615 6.65 0.00 43.46 2.41
439 440 7.708752 AGACAGAAGCTGTAGCAGAATTATTAC 59.291 37.037 6.65 0.00 45.44 1.89
440 441 7.786030 AGACAGAAGCTGTAGCAGAATTATTA 58.214 34.615 6.65 0.00 45.44 0.98
441 442 6.648192 AGACAGAAGCTGTAGCAGAATTATT 58.352 36.000 6.65 0.00 45.44 1.40
442 443 6.232581 AGACAGAAGCTGTAGCAGAATTAT 57.767 37.500 6.65 0.00 45.44 1.28
443 444 5.667539 AGACAGAAGCTGTAGCAGAATTA 57.332 39.130 6.65 0.00 45.44 1.40
444 445 4.550076 AGACAGAAGCTGTAGCAGAATT 57.450 40.909 6.65 0.00 45.44 2.17
445 446 4.441356 GCTAGACAGAAGCTGTAGCAGAAT 60.441 45.833 14.28 0.00 45.44 2.40
446 447 3.119316 GCTAGACAGAAGCTGTAGCAGAA 60.119 47.826 14.28 0.00 45.44 3.02
447 448 2.425312 GCTAGACAGAAGCTGTAGCAGA 59.575 50.000 14.28 0.00 45.44 4.26
448 449 2.808244 GCTAGACAGAAGCTGTAGCAG 58.192 52.381 14.28 7.46 45.44 4.24
449 450 2.949451 GCTAGACAGAAGCTGTAGCA 57.051 50.000 14.28 0.00 45.44 3.49
456 457 0.179086 GGCTCCAGCTAGACAGAAGC 60.179 60.000 0.00 0.00 41.70 3.86
457 458 0.102120 CGGCTCCAGCTAGACAGAAG 59.898 60.000 0.00 0.00 41.70 2.85
458 459 0.323451 TCGGCTCCAGCTAGACAGAA 60.323 55.000 0.00 0.00 41.70 3.02
459 460 0.749818 CTCGGCTCCAGCTAGACAGA 60.750 60.000 0.00 0.00 41.70 3.41
460 461 0.749818 TCTCGGCTCCAGCTAGACAG 60.750 60.000 0.00 0.00 41.70 3.51
461 462 0.749818 CTCTCGGCTCCAGCTAGACA 60.750 60.000 0.00 0.00 41.70 3.41
462 463 2.029743 CTCTCGGCTCCAGCTAGAC 58.970 63.158 0.00 0.00 41.70 2.59
463 464 1.826054 GCTCTCGGCTCCAGCTAGA 60.826 63.158 0.00 1.82 41.70 2.43
464 465 2.727544 GCTCTCGGCTCCAGCTAG 59.272 66.667 0.00 0.00 41.70 3.42
478 479 6.880243 ACCACATCGGACTGTTAACAGCTC 62.880 50.000 30.97 25.04 42.37 4.09
479 480 5.130033 ACCACATCGGACTGTTAACAGCT 62.130 47.826 30.97 19.76 42.37 4.24
480 481 2.870435 ACCACATCGGACTGTTAACAGC 60.870 50.000 30.97 23.19 42.37 4.40
481 482 3.040147 ACCACATCGGACTGTTAACAG 57.960 47.619 29.76 29.76 43.44 3.16
482 483 3.478857 AACCACATCGGACTGTTAACA 57.521 42.857 8.28 8.28 38.63 2.41
483 484 3.120786 CGAAACCACATCGGACTGTTAAC 60.121 47.826 0.00 0.00 38.63 2.01
484 485 3.061322 CGAAACCACATCGGACTGTTAA 58.939 45.455 0.00 0.00 38.63 2.01
485 486 2.679450 CGAAACCACATCGGACTGTTA 58.321 47.619 0.00 0.00 38.63 2.41
486 487 1.508632 CGAAACCACATCGGACTGTT 58.491 50.000 0.00 0.00 38.63 3.16
487 488 0.949105 GCGAAACCACATCGGACTGT 60.949 55.000 0.00 0.00 40.54 3.55
488 489 1.635663 GGCGAAACCACATCGGACTG 61.636 60.000 0.00 0.00 40.54 3.51
489 490 1.375523 GGCGAAACCACATCGGACT 60.376 57.895 0.00 0.00 40.54 3.85
490 491 0.953960 AAGGCGAAACCACATCGGAC 60.954 55.000 0.00 0.00 43.14 4.79
491 492 0.250553 AAAGGCGAAACCACATCGGA 60.251 50.000 0.00 0.00 43.14 4.55
492 493 0.109781 CAAAGGCGAAACCACATCGG 60.110 55.000 0.00 0.00 43.14 4.18
493 494 0.729140 GCAAAGGCGAAACCACATCG 60.729 55.000 0.00 0.00 43.14 3.84
494 495 3.107017 GCAAAGGCGAAACCACATC 57.893 52.632 0.00 0.00 43.14 3.06
499 500 7.796660 CTTTTATTAAAAAGCAAAGGCGAAACC 59.203 33.333 3.37 0.00 43.68 3.27
500 501 8.693948 CTTTTATTAAAAAGCAAAGGCGAAAC 57.306 30.769 3.37 0.00 43.68 2.78
513 514 6.239743 CCCCCTGCCTCAACTTTTATTAAAAA 60.240 38.462 3.37 0.00 33.58 1.94
514 515 5.247337 CCCCCTGCCTCAACTTTTATTAAAA 59.753 40.000 1.85 1.85 0.00 1.52
515 516 4.775253 CCCCCTGCCTCAACTTTTATTAAA 59.225 41.667 0.00 0.00 0.00 1.52
516 517 4.349365 CCCCCTGCCTCAACTTTTATTAA 58.651 43.478 0.00 0.00 0.00 1.40
517 518 3.880117 GCCCCCTGCCTCAACTTTTATTA 60.880 47.826 0.00 0.00 0.00 0.98
518 519 2.820178 CCCCCTGCCTCAACTTTTATT 58.180 47.619 0.00 0.00 0.00 1.40
519 520 1.619704 GCCCCCTGCCTCAACTTTTAT 60.620 52.381 0.00 0.00 0.00 1.40
520 521 0.251608 GCCCCCTGCCTCAACTTTTA 60.252 55.000 0.00 0.00 0.00 1.52
521 522 1.533994 GCCCCCTGCCTCAACTTTT 60.534 57.895 0.00 0.00 0.00 2.27
522 523 2.118294 GCCCCCTGCCTCAACTTT 59.882 61.111 0.00 0.00 0.00 2.66
523 524 2.777960 TTGCCCCCTGCCTCAACTT 61.778 57.895 0.00 0.00 40.16 2.66
524 525 3.185203 TTGCCCCCTGCCTCAACT 61.185 61.111 0.00 0.00 40.16 3.16
525 526 2.991540 GTTGCCCCCTGCCTCAAC 60.992 66.667 0.00 0.00 40.16 3.18
526 527 4.299796 GGTTGCCCCCTGCCTCAA 62.300 66.667 0.00 0.00 40.16 3.02
536 537 5.685520 TTTTGAAATAATAGGGGTTGCCC 57.314 39.130 0.00 0.00 44.51 5.36
603 604 2.346803 GTTGATCACCACGTATGCACT 58.653 47.619 0.00 0.00 0.00 4.40
606 607 0.650512 CCGTTGATCACCACGTATGC 59.349 55.000 16.47 0.00 0.00 3.14
658 659 0.597118 CTAGAGTCATCAGCCGCAGC 60.597 60.000 0.00 0.00 40.32 5.25
700 701 2.356992 GGATCCGAGTCCCAGATCC 58.643 63.158 13.09 13.09 46.82 3.36
742 743 1.134128 TCTGTCTGTGGCTTTTGCTGA 60.134 47.619 0.00 0.00 46.54 4.26
753 754 4.202040 TGGCAAGAAAACATTCTGTCTGTG 60.202 41.667 0.00 0.00 0.00 3.66
895 911 4.378030 CCTCTATTTATACGCACGTCGAAC 59.622 45.833 13.06 0.00 41.67 3.95
930 946 2.302260 GAGTGATGATGAGGACTCCGA 58.698 52.381 0.00 0.00 30.55 4.55
985 1003 3.375782 AGCCATGCAGAAAGAAAACAC 57.624 42.857 0.00 0.00 0.00 3.32
986 1004 3.243839 GGAAGCCATGCAGAAAGAAAACA 60.244 43.478 0.00 0.00 0.00 2.83
987 1005 3.006217 AGGAAGCCATGCAGAAAGAAAAC 59.994 43.478 0.00 0.00 0.00 2.43
988 1006 3.233507 AGGAAGCCATGCAGAAAGAAAA 58.766 40.909 0.00 0.00 0.00 2.29
989 1007 2.821969 GAGGAAGCCATGCAGAAAGAAA 59.178 45.455 0.00 0.00 0.00 2.52
990 1008 2.440409 GAGGAAGCCATGCAGAAAGAA 58.560 47.619 0.00 0.00 0.00 2.52
991 1009 1.676916 CGAGGAAGCCATGCAGAAAGA 60.677 52.381 0.00 0.00 0.00 2.52
992 1010 0.731417 CGAGGAAGCCATGCAGAAAG 59.269 55.000 0.00 0.00 0.00 2.62
1164 1191 0.615331 GGAGGTGCTTGATGGTCTCA 59.385 55.000 0.00 0.00 0.00 3.27
1218 1245 2.752238 AGGAGACCGTCGGAGCAG 60.752 66.667 20.51 0.00 0.00 4.24
1230 1257 3.304911 AGGAAGTCGATCATGAGGAGA 57.695 47.619 0.09 0.00 0.00 3.71
1259 1286 8.673626 AGAAACATTGCAATTCTAATTGTACG 57.326 30.769 9.83 8.30 45.77 3.67
1260 1287 9.624697 TGAGAAACATTGCAATTCTAATTGTAC 57.375 29.630 9.83 3.15 45.77 2.90
1263 1290 8.166706 GCTTGAGAAACATTGCAATTCTAATTG 58.833 33.333 9.83 10.43 46.55 2.32
1264 1291 8.092687 AGCTTGAGAAACATTGCAATTCTAATT 58.907 29.630 9.83 0.54 33.73 1.40
1325 1355 3.512724 AGGTTTACTACGTGCAGTACCAT 59.487 43.478 11.31 0.00 31.93 3.55
1395 1458 4.096003 AACGGGAGGCCCATGTCG 62.096 66.667 0.00 0.00 45.83 4.35
1615 1700 0.389687 GTGCACTGAGGCTGAGAGAC 60.390 60.000 8.31 0.00 34.04 3.36
1649 1752 6.998802 ACATAGAGAATTAGTATGCCTGACC 58.001 40.000 0.00 0.00 0.00 4.02
1847 1966 8.644216 TGTAAGAGAAGTTGTTTGATGGTACTA 58.356 33.333 0.00 0.00 0.00 1.82
1885 2009 3.010420 GGCACAGGATTAGTTTCTCCAC 58.990 50.000 0.00 0.00 33.75 4.02
2066 2219 3.527360 GAGCTGCGCGTTGTGCTTT 62.527 57.895 8.43 0.00 43.27 3.51
2353 2582 2.846206 TGGTAGATGAGCCTGGACATTT 59.154 45.455 0.00 0.37 0.00 2.32
2354 2583 2.481441 TGGTAGATGAGCCTGGACATT 58.519 47.619 0.00 0.00 0.00 2.71
2410 2640 2.254152 TGTCTGCCCATTCTACTCCT 57.746 50.000 0.00 0.00 0.00 3.69
2442 2692 2.359900 GCTTCCACCATGAAGTACCAG 58.640 52.381 0.00 0.00 42.98 4.00
2444 2694 1.282157 AGGCTTCCACCATGAAGTACC 59.718 52.381 0.00 0.00 42.98 3.34
2447 2697 0.036010 CGAGGCTTCCACCATGAAGT 60.036 55.000 0.00 0.00 42.98 3.01
2452 2702 4.473520 CGGCGAGGCTTCCACCAT 62.474 66.667 0.00 0.00 0.00 3.55
2486 2864 1.825474 TCCTCATGGAAGAACTCGTCC 59.175 52.381 4.88 4.88 43.50 4.79
2503 2881 4.524714 AGAGCGCATATGTAACATAGTCCT 59.475 41.667 11.47 0.00 0.00 3.85
2504 2882 4.623167 CAGAGCGCATATGTAACATAGTCC 59.377 45.833 11.47 0.00 0.00 3.85
2505 2883 4.090642 GCAGAGCGCATATGTAACATAGTC 59.909 45.833 11.47 0.00 41.79 2.59
2506 2884 3.990469 GCAGAGCGCATATGTAACATAGT 59.010 43.478 11.47 0.00 41.79 2.12
2550 2938 6.589139 TCTTTACTTTTACTTTAGCTCGGAGC 59.411 38.462 22.13 22.13 42.84 4.70
2652 3044 8.639761 AGTTTGTAACTGTGTACTAGATCAACT 58.360 33.333 0.00 0.00 41.01 3.16
2721 3121 0.331616 GAGGCAAACATACCAGGGGT 59.668 55.000 0.00 0.00 40.16 4.95
2749 3149 3.482436 CCCTCGTACTCTCAGCTAGATT 58.518 50.000 0.00 0.00 32.41 2.40
2780 3693 0.755698 TTGCCCGTGGTTTTTGCCTA 60.756 50.000 0.00 0.00 0.00 3.93
2784 3697 2.797719 GTGTATTTGCCCGTGGTTTTTG 59.202 45.455 0.00 0.00 0.00 2.44
2855 3773 8.742777 TCGATGTAGGTAGTTGTTTAACATAGT 58.257 33.333 0.00 0.00 39.30 2.12
2872 3790 5.515797 TCAACTGGTATTCTCGATGTAGG 57.484 43.478 0.00 0.00 0.00 3.18
2945 3863 6.623486 TGATCTGGATTTAACATTGTTGCTG 58.377 36.000 12.30 0.00 0.00 4.41
3105 4023 0.895530 TACCCAGCGAGAACTCCTTG 59.104 55.000 0.00 0.00 0.00 3.61
3122 4051 3.261137 GGAGGGAGTACTTATGGGCATAC 59.739 52.174 0.00 0.00 0.00 2.39
3127 4056 2.083628 ACGGAGGGAGTACTTATGGG 57.916 55.000 0.00 0.00 0.00 4.00
3137 4066 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
3138 4067 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
3139 4068 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
3140 4069 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
3143 4072 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
3144 4073 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
3145 4074 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
3146 4075 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
3147 4076 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
3148 4077 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
3149 4078 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
3150 4079 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
3151 4080 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
3152 4081 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
3153 4082 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
3154 4083 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
3155 4084 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
3156 4085 7.506328 AAAGTTAGTACAAAGTTGGGTCATC 57.494 36.000 0.00 0.00 0.00 2.92
3157 4086 8.215736 ACTAAAGTTAGTACAAAGTTGGGTCAT 58.784 33.333 1.81 0.00 41.92 3.06
3158 4087 7.567458 ACTAAAGTTAGTACAAAGTTGGGTCA 58.433 34.615 1.81 0.00 41.92 4.02
3171 4100 8.703743 TGACCCAACTTTGTACTAAAGTTAGTA 58.296 33.333 23.56 6.81 45.57 1.82
3172 4101 7.567458 TGACCCAACTTTGTACTAAAGTTAGT 58.433 34.615 23.56 22.58 45.57 2.24
3173 4102 8.617290 ATGACCCAACTTTGTACTAAAGTTAG 57.383 34.615 23.56 20.79 45.57 2.34
3174 4103 8.434392 AGATGACCCAACTTTGTACTAAAGTTA 58.566 33.333 23.56 14.79 45.57 2.24
3176 4105 6.838382 AGATGACCCAACTTTGTACTAAAGT 58.162 36.000 14.04 14.04 41.82 2.66
3177 4106 9.449719 AATAGATGACCCAACTTTGTACTAAAG 57.550 33.333 13.08 13.08 0.00 1.85
3178 4107 9.802039 AAATAGATGACCCAACTTTGTACTAAA 57.198 29.630 0.00 0.00 0.00 1.85
3179 4108 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
3181 4110 9.449719 CTAAAATAGATGACCCAACTTTGTACT 57.550 33.333 0.00 0.00 0.00 2.73
3182 4111 9.444600 TCTAAAATAGATGACCCAACTTTGTAC 57.555 33.333 0.00 0.00 0.00 2.90
3184 4113 8.793592 GTTCTAAAATAGATGACCCAACTTTGT 58.206 33.333 0.00 0.00 34.22 2.83
3185 4114 7.962918 CGTTCTAAAATAGATGACCCAACTTTG 59.037 37.037 0.00 0.00 34.22 2.77
3195 4124 5.897824 ACTCCCTCCGTTCTAAAATAGATGA 59.102 40.000 0.00 0.00 34.22 2.92
3206 4135 9.771140 AATCTTAATATATACTCCCTCCGTTCT 57.229 33.333 0.00 0.00 0.00 3.01
3356 4318 7.674120 ACGAATTAGTGTTCTAGGTAACCTTT 58.326 34.615 0.00 0.00 34.61 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.