Multiple sequence alignment - TraesCS7D01G420300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G420300 chr7D 100.000 8999 0 0 1 8999 539943065 539952063 0.000000e+00 16619.0
1 TraesCS7D01G420300 chr7D 95.890 146 5 1 4185 4330 616052730 616052586 1.510000e-57 235.0
2 TraesCS7D01G420300 chr7D 86.486 148 18 2 5210 5355 264084394 264084247 2.600000e-35 161.0
3 TraesCS7D01G420300 chr7D 82.659 173 24 5 5190 5359 117755375 117755206 2.020000e-31 148.0
4 TraesCS7D01G420300 chr7B 93.262 4215 243 27 1 4192 582930998 582935194 0.000000e+00 6172.0
5 TraesCS7D01G420300 chr7B 93.795 3449 176 17 5566 8999 582936360 582939785 0.000000e+00 5149.0
6 TraesCS7D01G420300 chr7B 94.627 1154 58 4 4322 5473 582935170 582936321 0.000000e+00 1784.0
7 TraesCS7D01G420300 chr7B 87.559 426 49 3 1104 1525 582931641 582932066 2.920000e-134 490.0
8 TraesCS7D01G420300 chr7B 80.736 571 90 11 1781 2339 583174909 583175471 2.320000e-115 427.0
9 TraesCS7D01G420300 chr7B 78.464 599 94 25 459 1053 583173804 583174371 8.590000e-95 359.0
10 TraesCS7D01G420300 chr7B 90.964 166 15 0 4175 4340 504550130 504549965 3.270000e-54 224.0
11 TraesCS7D01G420300 chr7B 78.469 209 29 10 3661 3861 583365093 583365293 1.230000e-23 122.0
12 TraesCS7D01G420300 chr7A 92.333 2439 124 22 4322 6732 621309477 621311880 0.000000e+00 3410.0
13 TraesCS7D01G420300 chr7A 93.237 2218 126 16 1973 4183 621307292 621309492 0.000000e+00 3243.0
14 TraesCS7D01G420300 chr7A 91.816 2004 112 18 7004 8994 621312179 621314143 0.000000e+00 2745.0
15 TraesCS7D01G420300 chr7A 93.363 663 32 6 999 1658 621306052 621306705 0.000000e+00 970.0
16 TraesCS7D01G420300 chr7A 86.581 857 81 17 1 839 621304658 621305498 0.000000e+00 915.0
17 TraesCS7D01G420300 chr7A 96.040 303 12 0 1670 1972 621306691 621306993 2.260000e-135 494.0
18 TraesCS7D01G420300 chr7A 87.167 413 41 8 649 1058 621306169 621306572 8.230000e-125 459.0
19 TraesCS7D01G420300 chr7A 93.191 235 15 1 6736 6970 621311950 621312183 2.410000e-90 344.0
20 TraesCS7D01G420300 chr7A 88.991 218 22 2 1102 1318 621305293 621305509 1.490000e-67 268.0
21 TraesCS7D01G420300 chr7A 89.474 133 12 2 5195 5325 427814847 427814979 5.590000e-37 167.0
22 TraesCS7D01G420300 chr7A 91.667 96 7 1 785 879 621305472 621305567 2.040000e-26 132.0
23 TraesCS7D01G420300 chr7A 100.000 38 0 0 952 989 621305682 621305719 4.510000e-08 71.3
24 TraesCS7D01G420300 chr7A 100.000 38 0 0 952 989 621305757 621305794 4.510000e-08 71.3
25 TraesCS7D01G420300 chr4B 89.040 2281 164 31 6733 8999 623645637 623647845 0.000000e+00 2748.0
26 TraesCS7D01G420300 chr4B 88.305 2283 178 32 6733 8999 623786428 623788637 0.000000e+00 2654.0
27 TraesCS7D01G420300 chr4B 86.217 2133 225 44 1173 3255 623783719 623785832 0.000000e+00 2246.0
28 TraesCS7D01G420300 chr4B 86.145 1458 149 29 1173 2586 623642978 623644426 0.000000e+00 1524.0
29 TraesCS7D01G420300 chr4B 88.889 513 47 7 6226 6732 623785854 623786362 2.760000e-174 623.0
30 TraesCS7D01G420300 chr4B 88.417 518 52 4 6226 6738 623645063 623645577 1.280000e-172 617.0
31 TraesCS7D01G420300 chr4B 86.452 310 33 6 1119 1425 623769649 623769952 1.870000e-86 331.0
32 TraesCS7D01G420300 chr4B 82.759 377 38 15 706 1057 623642978 623643352 2.440000e-80 311.0
33 TraesCS7D01G420300 chr4B 82.275 378 40 14 706 1058 623783719 623784094 1.470000e-77 302.0
34 TraesCS7D01G420300 chr4B 80.628 382 55 13 6157 6522 623955709 623955331 2.470000e-70 278.0
35 TraesCS7D01G420300 chr4B 77.157 394 84 5 7618 8008 624529129 624529519 3.270000e-54 224.0
36 TraesCS7D01G420300 chr4B 77.286 339 60 12 6289 6619 623654666 623654995 5.550000e-42 183.0
37 TraesCS7D01G420300 chr4B 87.013 154 19 1 5199 5351 438375333 438375180 1.200000e-38 172.0
38 TraesCS7D01G420300 chr4B 88.618 123 14 0 1202 1324 623643224 623643102 5.630000e-32 150.0
39 TraesCS7D01G420300 chr4D 88.455 2278 182 26 6733 8999 487875125 487877332 0.000000e+00 2675.0
40 TraesCS7D01G420300 chr4D 86.122 2068 216 43 1173 3211 487872467 487874492 0.000000e+00 2163.0
41 TraesCS7D01G420300 chr4D 78.272 1146 201 36 6872 8000 488034129 488035243 0.000000e+00 693.0
42 TraesCS7D01G420300 chr4D 88.867 512 50 4 6226 6732 487874550 487875059 2.760000e-174 623.0
43 TraesCS7D01G420300 chr4D 79.892 930 109 30 280 1178 487871254 487872136 2.150000e-170 610.0
44 TraesCS7D01G420300 chr4D 86.798 356 42 3 706 1058 487872467 487872820 8.470000e-105 392.0
45 TraesCS7D01G420300 chr4D 87.209 258 23 5 1274 1525 487871741 487871994 1.480000e-72 285.0
46 TraesCS7D01G420300 chr4D 80.366 382 57 12 6157 6522 488171636 488172015 3.200000e-69 274.0
47 TraesCS7D01G420300 chr4D 92.994 157 10 1 4185 4340 491819529 491819685 2.530000e-55 228.0
48 TraesCS7D01G420300 chr6D 95.302 149 6 1 4185 4333 132665380 132665233 1.510000e-57 235.0
49 TraesCS7D01G420300 chr5A 77.692 390 81 5 7618 8004 669987142 669987528 5.430000e-57 233.0
50 TraesCS7D01G420300 chr5A 80.000 245 35 10 7134 7376 669740079 669740311 1.550000e-37 169.0
51 TraesCS7D01G420300 chr2D 96.479 142 4 1 4185 4326 414756165 414756305 5.430000e-57 233.0
52 TraesCS7D01G420300 chr2D 83.333 168 27 1 5193 5359 335689700 335689867 4.350000e-33 154.0
53 TraesCS7D01G420300 chr3B 95.833 144 5 1 4184 4327 482578032 482578174 1.950000e-56 231.0
54 TraesCS7D01G420300 chr6A 93.464 153 8 2 4185 4336 26053617 26053768 9.090000e-55 226.0
55 TraesCS7D01G420300 chr1D 92.949 156 10 1 4177 4332 189608976 189608822 9.090000e-55 226.0
56 TraesCS7D01G420300 chr5D 91.358 162 13 1 4173 4333 211346265 211346426 4.230000e-53 220.0
57 TraesCS7D01G420300 chr2B 84.524 168 25 1 5193 5359 403702276 403702443 2.010000e-36 165.0
58 TraesCS7D01G420300 chr2A 84.524 168 25 1 5193 5359 446072049 446072216 2.010000e-36 165.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G420300 chr7D 539943065 539952063 8998 False 16619.000000 16619 100.000000 1 8999 1 chr7D.!!$F1 8998
1 TraesCS7D01G420300 chr7B 582930998 582939785 8787 False 3398.750000 6172 92.310750 1 8999 4 chr7B.!!$F2 8998
2 TraesCS7D01G420300 chr7B 583173804 583175471 1667 False 393.000000 427 79.600000 459 2339 2 chr7B.!!$F3 1880
3 TraesCS7D01G420300 chr7A 621304658 621314143 9485 False 1093.550000 3410 92.865500 1 8994 12 chr7A.!!$F2 8993
4 TraesCS7D01G420300 chr4B 623783719 623788637 4918 False 1456.250000 2654 86.421500 706 8999 4 chr4B.!!$F5 8293
5 TraesCS7D01G420300 chr4B 623642978 623647845 4867 False 1300.000000 2748 86.590250 706 8999 4 chr4B.!!$F4 8293
6 TraesCS7D01G420300 chr4D 487871254 487877332 6078 False 1124.666667 2675 86.223833 280 8999 6 chr4D.!!$F4 8719
7 TraesCS7D01G420300 chr4D 488034129 488035243 1114 False 693.000000 693 78.272000 6872 8000 1 chr4D.!!$F1 1128

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
533 551 0.617413 ATCTGAAGTGGGCCAGTCTG 59.383 55.000 15.65 14.95 0.00 3.51 F
1036 2280 0.034896 ACTTCGACGACCAATTGCCT 59.965 50.000 0.00 0.00 0.00 4.75 F
1037 2281 1.156736 CTTCGACGACCAATTGCCTT 58.843 50.000 0.00 0.00 0.00 4.35 F
1041 2285 2.006888 CGACGACCAATTGCCTTATGT 58.993 47.619 0.00 0.00 0.00 2.29 F
1042 2286 2.418628 CGACGACCAATTGCCTTATGTT 59.581 45.455 0.00 0.00 0.00 2.71 F
2039 3922 2.588464 TCGCATAAGTTTTTCCCCCA 57.412 45.000 0.00 0.00 0.00 4.96 F
3104 5021 5.920903 TCGTTAATCGTTTCCCCATAGAAT 58.079 37.500 0.00 0.00 40.80 2.40 F
4194 6120 1.079503 GTTGAAGCCGCAGACTAAGG 58.920 55.000 0.00 0.00 0.00 2.69 F
4216 6142 0.326238 TAGCCTAGTGGTGGGAAGGG 60.326 60.000 0.00 0.00 35.27 3.95 F
4255 6181 0.400213 CCCAGGTTCAAGGCACAGTA 59.600 55.000 0.00 0.00 0.00 2.74 F
5902 7849 0.973632 TAGCGAGTGCCTTTGGAGAA 59.026 50.000 0.00 0.00 44.31 2.87 F
7354 9413 1.750778 CATGGATTGCCCTGGTTACAC 59.249 52.381 0.00 0.00 35.38 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2264 4151 1.235724 GGGTCACTGCACCTAACAAC 58.764 55.000 0.00 0.00 36.57 3.32 R
2600 4487 0.035820 TCGGCTTGGTGGGTGTTATC 60.036 55.000 0.00 0.00 0.00 1.75 R
2881 4770 5.062528 TGCTAATGTTCGGATCATTATGCA 58.937 37.500 23.61 23.61 38.25 3.96 R
3006 4923 6.591001 ACAAGGTGTATTTTTGCTTCCAATT 58.409 32.000 0.00 0.00 0.00 2.32 R
3104 5021 8.662141 GCGTAAAGAACATAAGGAACTATCAAA 58.338 33.333 0.00 0.00 38.49 2.69 R
3218 5138 2.485124 CCCAAAGCAGTGGCATCAAAAA 60.485 45.455 0.00 0.00 44.61 1.94 R
4197 6123 0.326238 CCCTTCCCACCACTAGGCTA 60.326 60.000 0.00 0.00 39.06 3.93 R
5942 7889 2.420022 CCTTCCCGCACTAACATTTCAG 59.580 50.000 0.00 0.00 0.00 3.02 R
6243 8197 3.207778 GTGTTAGGTGTGCCACAAACTA 58.792 45.455 0.00 2.60 35.86 2.24 R
6362 8316 3.407424 TCTCCGGCATGATTAATCCAG 57.593 47.619 12.90 6.45 0.00 3.86 R
7788 9851 0.393537 CACTGCCCATTGGAGGAGTC 60.394 60.000 13.01 0.00 0.00 3.36 R
8539 10632 0.810648 TGGATCCAACGAGCATTTGC 59.189 50.000 13.46 0.00 42.49 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
349 364 9.744468 AATAACTTTCATCTACAAAACCACAAC 57.256 29.630 0.00 0.00 0.00 3.32
353 368 8.621286 ACTTTCATCTACAAAACCACAACTAAG 58.379 33.333 0.00 0.00 0.00 2.18
367 383 7.988737 ACCACAACTAAGTACCAAAAACTTAC 58.011 34.615 0.00 0.00 38.18 2.34
460 478 5.099575 GGTATTATGTGGAACGGCAAAAAG 58.900 41.667 0.00 0.00 42.39 2.27
482 500 1.338579 TGACGCTGGTGCATCACATAA 60.339 47.619 0.00 0.00 36.42 1.90
488 506 3.614092 CTGGTGCATCACATAAGACCTT 58.386 45.455 0.00 0.00 35.86 3.50
499 517 4.804139 CACATAAGACCTTTCGATAACGCT 59.196 41.667 0.00 0.00 39.58 5.07
530 548 1.001641 GCATCTGAAGTGGGCCAGT 60.002 57.895 6.40 7.51 0.00 4.00
533 551 0.617413 ATCTGAAGTGGGCCAGTCTG 59.383 55.000 15.65 14.95 0.00 3.51
637 657 5.412594 AGCATTTAATCGTGGCATATACCTG 59.587 40.000 0.00 0.00 0.00 4.00
744 1988 8.954950 AGATGTAAATCTTTCTCTGGTACATG 57.045 34.615 0.00 0.00 38.20 3.21
745 1989 8.543774 AGATGTAAATCTTTCTCTGGTACATGT 58.456 33.333 2.69 2.69 38.20 3.21
746 1990 8.723942 ATGTAAATCTTTCTCTGGTACATGTC 57.276 34.615 0.00 0.00 38.20 3.06
747 1991 7.676004 TGTAAATCTTTCTCTGGTACATGTCA 58.324 34.615 0.00 0.00 38.20 3.58
748 1992 7.819415 TGTAAATCTTTCTCTGGTACATGTCAG 59.181 37.037 0.00 4.74 38.20 3.51
749 1993 4.808414 TCTTTCTCTGGTACATGTCAGG 57.192 45.455 0.00 0.00 38.20 3.86
750 1994 3.055819 TCTTTCTCTGGTACATGTCAGGC 60.056 47.826 0.00 0.00 38.20 4.85
751 1995 1.195115 TCTCTGGTACATGTCAGGCC 58.805 55.000 0.00 0.00 38.20 5.19
752 1996 0.904649 CTCTGGTACATGTCAGGCCA 59.095 55.000 5.01 6.41 38.20 5.36
753 1997 1.278985 CTCTGGTACATGTCAGGCCAA 59.721 52.381 5.01 0.00 38.20 4.52
754 1998 1.915489 TCTGGTACATGTCAGGCCAAT 59.085 47.619 5.01 0.00 38.20 3.16
755 1999 2.092968 TCTGGTACATGTCAGGCCAATC 60.093 50.000 5.01 0.00 38.20 2.67
756 2000 1.299541 GGTACATGTCAGGCCAATCG 58.700 55.000 5.01 0.00 0.00 3.34
757 2001 1.299541 GTACATGTCAGGCCAATCGG 58.700 55.000 5.01 0.00 0.00 4.18
758 2002 0.908910 TACATGTCAGGCCAATCGGT 59.091 50.000 5.01 0.00 33.28 4.69
759 2003 0.908910 ACATGTCAGGCCAATCGGTA 59.091 50.000 5.01 0.00 33.28 4.02
760 2004 1.490490 ACATGTCAGGCCAATCGGTAT 59.510 47.619 5.01 0.00 33.28 2.73
761 2005 2.703536 ACATGTCAGGCCAATCGGTATA 59.296 45.455 5.01 0.00 33.28 1.47
762 2006 3.135712 ACATGTCAGGCCAATCGGTATAA 59.864 43.478 5.01 0.00 33.28 0.98
763 2007 3.916359 TGTCAGGCCAATCGGTATAAA 57.084 42.857 5.01 0.00 33.28 1.40
764 2008 4.223556 TGTCAGGCCAATCGGTATAAAA 57.776 40.909 5.01 0.00 33.28 1.52
765 2009 3.942748 TGTCAGGCCAATCGGTATAAAAC 59.057 43.478 5.01 0.00 33.28 2.43
766 2010 4.196971 GTCAGGCCAATCGGTATAAAACT 58.803 43.478 5.01 0.00 33.28 2.66
767 2011 5.104859 TGTCAGGCCAATCGGTATAAAACTA 60.105 40.000 5.01 0.00 33.28 2.24
768 2012 5.818857 GTCAGGCCAATCGGTATAAAACTAA 59.181 40.000 5.01 0.00 33.28 2.24
769 2013 6.485648 GTCAGGCCAATCGGTATAAAACTAAT 59.514 38.462 5.01 0.00 33.28 1.73
770 2014 7.012989 GTCAGGCCAATCGGTATAAAACTAATT 59.987 37.037 5.01 0.00 33.28 1.40
771 2015 7.012894 TCAGGCCAATCGGTATAAAACTAATTG 59.987 37.037 5.01 0.00 33.46 2.32
772 2016 7.012894 CAGGCCAATCGGTATAAAACTAATTGA 59.987 37.037 5.01 0.00 34.56 2.57
773 2017 7.558444 AGGCCAATCGGTATAAAACTAATTGAA 59.442 33.333 5.01 0.00 34.56 2.69
774 2018 8.357402 GGCCAATCGGTATAAAACTAATTGAAT 58.643 33.333 0.00 0.00 34.56 2.57
781 2025 9.525007 CGGTATAAAACTAATTGAATATCACGC 57.475 33.333 0.00 0.00 0.00 5.34
800 2044 5.229052 TCACGCAAATCTTTATTTAATGCGC 59.771 36.000 15.98 0.00 46.40 6.09
801 2045 5.004251 CACGCAAATCTTTATTTAATGCGCA 59.996 36.000 14.96 14.96 46.40 6.09
802 2046 5.574830 ACGCAAATCTTTATTTAATGCGCAA 59.425 32.000 17.11 0.00 46.40 4.85
803 2047 6.090088 ACGCAAATCTTTATTTAATGCGCAAA 59.910 30.769 17.11 4.38 46.40 3.68
804 2048 6.952635 CGCAAATCTTTATTTAATGCGCAAAA 59.047 30.769 17.11 12.58 40.73 2.44
805 2049 7.476802 CGCAAATCTTTATTTAATGCGCAAAAA 59.523 29.630 17.11 18.72 40.73 1.94
864 2108 9.676195 TTGACATTAGTGACAATATTTTGTGTG 57.324 29.630 6.25 0.00 46.01 3.82
865 2109 7.807433 TGACATTAGTGACAATATTTTGTGTGC 59.193 33.333 6.25 0.00 46.01 4.57
866 2110 7.656412 ACATTAGTGACAATATTTTGTGTGCA 58.344 30.769 6.25 0.00 46.01 4.57
867 2111 8.306038 ACATTAGTGACAATATTTTGTGTGCAT 58.694 29.630 6.25 0.00 46.01 3.96
868 2112 9.142515 CATTAGTGACAATATTTTGTGTGCATT 57.857 29.630 6.25 0.00 46.01 3.56
872 2116 9.709495 AGTGACAATATTTTGTGTGCATTAAAT 57.291 25.926 6.25 0.00 46.01 1.40
882 2126 9.823098 TTTTGTGTGCATTAAATAATGATTTGC 57.177 25.926 15.53 3.62 44.40 3.68
883 2127 8.543862 TTGTGTGCATTAAATAATGATTTGCA 57.456 26.923 15.53 5.95 44.40 4.08
925 2169 9.899661 TTTATATGGTTTAGCTTGACATGTACT 57.100 29.630 0.00 0.00 0.00 2.73
928 2172 6.599356 TGGTTTAGCTTGACATGTACTAGA 57.401 37.500 0.00 0.00 0.00 2.43
929 2173 6.631016 TGGTTTAGCTTGACATGTACTAGAG 58.369 40.000 0.00 0.00 0.00 2.43
930 2174 6.436218 TGGTTTAGCTTGACATGTACTAGAGA 59.564 38.462 0.00 0.00 0.00 3.10
931 2175 7.039293 TGGTTTAGCTTGACATGTACTAGAGAA 60.039 37.037 0.00 0.00 0.00 2.87
932 2176 7.817962 GGTTTAGCTTGACATGTACTAGAGAAA 59.182 37.037 0.00 1.63 0.00 2.52
933 2177 8.865001 GTTTAGCTTGACATGTACTAGAGAAAG 58.135 37.037 0.00 0.00 0.00 2.62
934 2178 6.842437 AGCTTGACATGTACTAGAGAAAGA 57.158 37.500 0.00 0.00 0.00 2.52
935 2179 6.626302 AGCTTGACATGTACTAGAGAAAGAC 58.374 40.000 0.00 0.00 0.00 3.01
936 2180 6.209589 AGCTTGACATGTACTAGAGAAAGACA 59.790 38.462 0.00 0.00 0.00 3.41
937 2181 6.309251 GCTTGACATGTACTAGAGAAAGACAC 59.691 42.308 0.00 0.00 0.00 3.67
938 2182 6.894339 TGACATGTACTAGAGAAAGACACA 57.106 37.500 0.00 0.00 0.00 3.72
939 2183 7.284919 TGACATGTACTAGAGAAAGACACAA 57.715 36.000 0.00 0.00 0.00 3.33
940 2184 7.722363 TGACATGTACTAGAGAAAGACACAAA 58.278 34.615 0.00 0.00 0.00 2.83
941 2185 8.201464 TGACATGTACTAGAGAAAGACACAAAA 58.799 33.333 0.00 0.00 0.00 2.44
942 2186 8.958119 ACATGTACTAGAGAAAGACACAAAAA 57.042 30.769 0.00 0.00 0.00 1.94
943 2187 9.561069 ACATGTACTAGAGAAAGACACAAAAAT 57.439 29.630 0.00 0.00 0.00 1.82
949 2193 9.220767 ACTAGAGAAAGACACAAAAATATGGTC 57.779 33.333 0.00 0.00 0.00 4.02
950 2194 9.442047 CTAGAGAAAGACACAAAAATATGGTCT 57.558 33.333 0.00 0.00 40.33 3.85
952 2196 9.965902 AGAGAAAGACACAAAAATATGGTCTAT 57.034 29.630 0.00 0.00 37.82 1.98
968 2212 5.914033 TGGTCTATATACAGTTCTGGTTGC 58.086 41.667 4.82 0.00 0.00 4.17
969 2213 5.163343 TGGTCTATATACAGTTCTGGTTGCC 60.163 44.000 4.82 0.00 0.00 4.52
970 2214 5.298347 GTCTATATACAGTTCTGGTTGCCC 58.702 45.833 4.82 0.00 0.00 5.36
971 2215 4.966168 TCTATATACAGTTCTGGTTGCCCA 59.034 41.667 4.82 0.00 38.87 5.36
972 2216 4.796110 ATATACAGTTCTGGTTGCCCAT 57.204 40.909 4.82 0.00 40.90 4.00
973 2217 5.904984 ATATACAGTTCTGGTTGCCCATA 57.095 39.130 4.82 0.00 40.90 2.74
974 2218 2.496899 ACAGTTCTGGTTGCCCATAG 57.503 50.000 4.82 0.00 40.90 2.23
975 2219 1.705186 ACAGTTCTGGTTGCCCATAGT 59.295 47.619 4.82 0.00 40.90 2.12
976 2220 2.086869 CAGTTCTGGTTGCCCATAGTG 58.913 52.381 0.00 0.00 40.90 2.74
977 2221 1.985159 AGTTCTGGTTGCCCATAGTGA 59.015 47.619 0.00 0.00 40.90 3.41
978 2222 2.578021 AGTTCTGGTTGCCCATAGTGAT 59.422 45.455 0.00 0.00 40.90 3.06
979 2223 2.945668 GTTCTGGTTGCCCATAGTGATC 59.054 50.000 0.00 0.00 40.90 2.92
980 2224 2.481441 TCTGGTTGCCCATAGTGATCT 58.519 47.619 0.00 0.00 40.90 2.75
981 2225 2.846206 TCTGGTTGCCCATAGTGATCTT 59.154 45.455 0.00 0.00 40.90 2.40
982 2226 3.118261 TCTGGTTGCCCATAGTGATCTTC 60.118 47.826 0.00 0.00 40.90 2.87
983 2227 2.575735 TGGTTGCCCATAGTGATCTTCA 59.424 45.455 0.00 0.00 35.17 3.02
984 2228 3.202818 TGGTTGCCCATAGTGATCTTCAT 59.797 43.478 0.00 0.00 35.17 2.57
985 2229 3.817647 GGTTGCCCATAGTGATCTTCATC 59.182 47.826 0.00 0.00 0.00 2.92
986 2230 4.445448 GGTTGCCCATAGTGATCTTCATCT 60.445 45.833 0.00 0.00 0.00 2.90
987 2231 5.221722 GGTTGCCCATAGTGATCTTCATCTA 60.222 44.000 0.00 0.00 0.00 1.98
988 2232 6.471146 GTTGCCCATAGTGATCTTCATCTAT 58.529 40.000 0.00 0.00 0.00 1.98
989 2233 6.692849 TGCCCATAGTGATCTTCATCTATT 57.307 37.500 0.00 0.00 0.00 1.73
990 2234 7.797121 TGCCCATAGTGATCTTCATCTATTA 57.203 36.000 0.00 0.00 0.00 0.98
991 2235 7.615403 TGCCCATAGTGATCTTCATCTATTAC 58.385 38.462 0.00 0.00 0.00 1.89
992 2236 7.235399 TGCCCATAGTGATCTTCATCTATTACA 59.765 37.037 0.00 0.00 0.00 2.41
993 2237 8.263640 GCCCATAGTGATCTTCATCTATTACAT 58.736 37.037 0.00 0.00 0.00 2.29
1025 2269 6.895898 TGTATAGGCTTAATCTACTTCGACG 58.104 40.000 0.00 0.00 0.00 5.12
1026 2270 6.707608 TGTATAGGCTTAATCTACTTCGACGA 59.292 38.462 0.00 0.00 0.00 4.20
1027 2271 4.290104 AGGCTTAATCTACTTCGACGAC 57.710 45.455 0.00 0.00 0.00 4.34
1028 2272 3.066481 AGGCTTAATCTACTTCGACGACC 59.934 47.826 0.00 0.00 0.00 4.79
1029 2273 3.181493 GGCTTAATCTACTTCGACGACCA 60.181 47.826 0.00 0.00 0.00 4.02
1030 2274 4.418392 GCTTAATCTACTTCGACGACCAA 58.582 43.478 0.00 0.00 0.00 3.67
1031 2275 5.041940 GCTTAATCTACTTCGACGACCAAT 58.958 41.667 0.00 0.00 0.00 3.16
1032 2276 5.519206 GCTTAATCTACTTCGACGACCAATT 59.481 40.000 0.00 0.00 0.00 2.32
1033 2277 6.508088 GCTTAATCTACTTCGACGACCAATTG 60.508 42.308 0.00 0.00 0.00 2.32
1034 2278 2.602878 TCTACTTCGACGACCAATTGC 58.397 47.619 0.00 0.00 0.00 3.56
1035 2279 1.659098 CTACTTCGACGACCAATTGCC 59.341 52.381 0.00 0.00 0.00 4.52
1036 2280 0.034896 ACTTCGACGACCAATTGCCT 59.965 50.000 0.00 0.00 0.00 4.75
1037 2281 1.156736 CTTCGACGACCAATTGCCTT 58.843 50.000 0.00 0.00 0.00 4.35
1038 2282 2.289195 ACTTCGACGACCAATTGCCTTA 60.289 45.455 0.00 0.00 0.00 2.69
1039 2283 2.684001 TCGACGACCAATTGCCTTAT 57.316 45.000 0.00 0.00 0.00 1.73
1040 2284 2.276201 TCGACGACCAATTGCCTTATG 58.724 47.619 0.00 0.00 0.00 1.90
1041 2285 2.006888 CGACGACCAATTGCCTTATGT 58.993 47.619 0.00 0.00 0.00 2.29
1042 2286 2.418628 CGACGACCAATTGCCTTATGTT 59.581 45.455 0.00 0.00 0.00 2.71
1043 2287 3.119990 CGACGACCAATTGCCTTATGTTT 60.120 43.478 0.00 0.00 0.00 2.83
1044 2288 4.412207 GACGACCAATTGCCTTATGTTTC 58.588 43.478 0.00 0.00 0.00 2.78
1045 2289 4.079253 ACGACCAATTGCCTTATGTTTCT 58.921 39.130 0.00 0.00 0.00 2.52
1046 2290 4.522789 ACGACCAATTGCCTTATGTTTCTT 59.477 37.500 0.00 0.00 0.00 2.52
1047 2291 5.010617 ACGACCAATTGCCTTATGTTTCTTT 59.989 36.000 0.00 0.00 0.00 2.52
1048 2292 5.925969 CGACCAATTGCCTTATGTTTCTTTT 59.074 36.000 0.00 0.00 0.00 2.27
1049 2293 7.087639 CGACCAATTGCCTTATGTTTCTTTTA 58.912 34.615 0.00 0.00 0.00 1.52
1050 2294 7.759433 CGACCAATTGCCTTATGTTTCTTTTAT 59.241 33.333 0.00 0.00 0.00 1.40
1051 2295 9.087424 GACCAATTGCCTTATGTTTCTTTTATC 57.913 33.333 0.00 0.00 0.00 1.75
1052 2296 8.592809 ACCAATTGCCTTATGTTTCTTTTATCA 58.407 29.630 0.00 0.00 0.00 2.15
1053 2297 8.872845 CCAATTGCCTTATGTTTCTTTTATCAC 58.127 33.333 0.00 0.00 0.00 3.06
1054 2298 8.586273 CAATTGCCTTATGTTTCTTTTATCACG 58.414 33.333 0.00 0.00 0.00 4.35
1055 2299 5.636837 TGCCTTATGTTTCTTTTATCACGC 58.363 37.500 0.00 0.00 0.00 5.34
1056 2300 5.414454 TGCCTTATGTTTCTTTTATCACGCT 59.586 36.000 0.00 0.00 0.00 5.07
1057 2301 5.965918 GCCTTATGTTTCTTTTATCACGCTC 59.034 40.000 0.00 0.00 0.00 5.03
1058 2302 6.403200 GCCTTATGTTTCTTTTATCACGCTCA 60.403 38.462 0.00 0.00 0.00 4.26
1059 2303 7.679638 GCCTTATGTTTCTTTTATCACGCTCAT 60.680 37.037 0.00 0.00 0.00 2.90
1060 2304 8.184192 CCTTATGTTTCTTTTATCACGCTCATT 58.816 33.333 0.00 0.00 0.00 2.57
1069 2313 9.337396 TCTTTTATCACGCTCATTAATATTGGT 57.663 29.630 0.00 0.00 0.00 3.67
1070 2314 9.385902 CTTTTATCACGCTCATTAATATTGGTG 57.614 33.333 0.00 0.00 0.00 4.17
1071 2315 4.811555 TCACGCTCATTAATATTGGTGC 57.188 40.909 0.00 0.17 0.00 5.01
1072 2316 4.195416 TCACGCTCATTAATATTGGTGCA 58.805 39.130 0.00 0.00 0.00 4.57
1073 2317 4.637977 TCACGCTCATTAATATTGGTGCAA 59.362 37.500 0.00 0.00 0.00 4.08
1074 2318 5.124617 TCACGCTCATTAATATTGGTGCAAA 59.875 36.000 0.00 0.00 0.00 3.68
1075 2319 5.804473 CACGCTCATTAATATTGGTGCAAAA 59.196 36.000 0.00 0.00 0.00 2.44
1076 2320 6.309980 CACGCTCATTAATATTGGTGCAAAAA 59.690 34.615 0.00 0.00 0.00 1.94
1123 2367 9.421806 AGATTCATTAAAATTTGTGCGAAATCA 57.578 25.926 0.00 0.00 0.00 2.57
1133 2377 9.971744 AAATTTGTGCGAAATCATTTATTAAGC 57.028 25.926 0.00 0.00 33.30 3.09
1134 2378 8.700722 ATTTGTGCGAAATCATTTATTAAGCA 57.299 26.923 0.00 0.00 37.60 3.91
1137 2381 7.368750 GTGCGAAATCATTTATTAAGCACTC 57.631 36.000 16.42 0.86 46.53 3.51
1138 2382 7.189512 GTGCGAAATCATTTATTAAGCACTCT 58.810 34.615 16.42 0.00 46.53 3.24
1139 2383 8.335356 GTGCGAAATCATTTATTAAGCACTCTA 58.665 33.333 16.42 0.00 46.53 2.43
1140 2384 9.056005 TGCGAAATCATTTATTAAGCACTCTAT 57.944 29.630 0.00 0.00 36.08 1.98
1141 2385 9.884465 GCGAAATCATTTATTAAGCACTCTATT 57.116 29.630 0.00 0.00 33.07 1.73
1170 2414 8.789881 TTTCTTTAATGTCATTAAACCACACG 57.210 30.769 21.61 13.53 39.17 4.49
1171 2415 7.731882 TCTTTAATGTCATTAAACCACACGA 57.268 32.000 21.61 15.12 39.17 4.35
1172 2416 8.330466 TCTTTAATGTCATTAAACCACACGAT 57.670 30.769 21.61 0.00 39.17 3.73
1173 2417 9.438228 TCTTTAATGTCATTAAACCACACGATA 57.562 29.630 21.61 3.63 39.17 2.92
1222 2466 6.061231 TCTCTAGTACGTGTCATGCTAATG 57.939 41.667 0.00 0.00 34.88 1.90
1490 2768 6.821031 ATGTATAGGCTTAGTCTACTTCGG 57.179 41.667 0.00 0.00 0.00 4.30
1801 3361 7.121168 ACAATTACATGATAGGACCAACACAAG 59.879 37.037 0.00 0.00 0.00 3.16
1851 3417 3.322828 ACATTACTGGACCGTGTACACTT 59.677 43.478 23.01 10.36 0.00 3.16
1905 3473 4.406456 TGGGAGTGAAATAAGCAACACAT 58.594 39.130 0.00 0.00 35.97 3.21
1907 3475 5.163513 GGGAGTGAAATAAGCAACACATTG 58.836 41.667 0.00 0.00 38.99 2.82
2038 3921 2.823747 ACTTCGCATAAGTTTTTCCCCC 59.176 45.455 0.00 0.00 0.00 5.40
2039 3922 2.588464 TCGCATAAGTTTTTCCCCCA 57.412 45.000 0.00 0.00 0.00 4.96
2935 4825 8.194769 TGGATTTGTTAGTTCCTTTCTTTCAAC 58.805 33.333 0.00 0.00 0.00 3.18
3104 5021 5.920903 TCGTTAATCGTTTCCCCATAGAAT 58.079 37.500 0.00 0.00 40.80 2.40
3135 5052 7.882179 AGTTCCTTATGTTCTTTACGCAATTT 58.118 30.769 0.00 0.00 0.00 1.82
3155 5072 8.874816 GCAATTTTTGTGTTAACTTTGAGGTAA 58.125 29.630 7.22 0.00 0.00 2.85
3217 5137 6.606241 TGGAGAAAATACCCCCTATGAAAT 57.394 37.500 0.00 0.00 0.00 2.17
3218 5138 6.992235 TGGAGAAAATACCCCCTATGAAATT 58.008 36.000 0.00 0.00 0.00 1.82
3251 5171 2.614057 CTGCTTTGGGCTAGTTATTCCG 59.386 50.000 0.00 0.00 42.39 4.30
3333 5253 9.990360 TCAAAATAAAGAAACCTTTTGTATCCC 57.010 29.630 0.00 0.00 38.86 3.85
3334 5254 8.921670 CAAAATAAAGAAACCTTTTGTATCCCG 58.078 33.333 0.00 0.00 35.11 5.14
3401 5321 2.303600 TCCGTAAGTGCACCAACCTATT 59.696 45.455 14.63 1.48 0.00 1.73
3471 5391 3.987868 TCTAGCTCGTCATGAAACACAAC 59.012 43.478 0.00 0.00 0.00 3.32
3528 5448 5.748734 GCCACTTCCCATATCAATATGTGGA 60.749 44.000 15.51 13.98 44.94 4.02
3617 5537 3.997021 CCATCTCATCCTTGTATTACGCC 59.003 47.826 0.00 0.00 0.00 5.68
3622 5542 3.449377 TCATCCTTGTATTACGCCTGTGA 59.551 43.478 0.00 0.00 0.00 3.58
3794 5715 9.677567 TGCTAAATATTGTTTCACACTCTTTTC 57.322 29.630 0.00 0.00 0.00 2.29
3957 5883 8.194769 ACACTAACAAAACCATGAAAACTAAGG 58.805 33.333 0.00 0.00 0.00 2.69
4185 6111 3.501950 CCTCATAAAAAGTTGAAGCCGC 58.498 45.455 0.00 0.00 0.00 6.53
4186 6112 3.057596 CCTCATAAAAAGTTGAAGCCGCA 60.058 43.478 0.00 0.00 0.00 5.69
4187 6113 4.159377 TCATAAAAAGTTGAAGCCGCAG 57.841 40.909 0.00 0.00 0.00 5.18
4188 6114 3.818210 TCATAAAAAGTTGAAGCCGCAGA 59.182 39.130 0.00 0.00 0.00 4.26
4189 6115 2.492019 AAAAAGTTGAAGCCGCAGAC 57.508 45.000 0.00 0.00 0.00 3.51
4190 6116 1.680338 AAAAGTTGAAGCCGCAGACT 58.320 45.000 0.00 0.00 0.00 3.24
4191 6117 2.543777 AAAGTTGAAGCCGCAGACTA 57.456 45.000 0.00 0.00 0.00 2.59
4192 6118 2.543777 AAGTTGAAGCCGCAGACTAA 57.456 45.000 0.00 0.00 0.00 2.24
4193 6119 2.086054 AGTTGAAGCCGCAGACTAAG 57.914 50.000 0.00 0.00 0.00 2.18
4194 6120 1.079503 GTTGAAGCCGCAGACTAAGG 58.920 55.000 0.00 0.00 0.00 2.69
4200 6126 2.906047 CCGCAGACTAAGGCATAGC 58.094 57.895 0.00 0.00 34.78 2.97
4211 6137 1.451936 GGCATAGCCTAGTGGTGGG 59.548 63.158 0.00 0.00 46.69 4.61
4212 6138 1.054406 GGCATAGCCTAGTGGTGGGA 61.054 60.000 0.00 0.00 46.69 4.37
4213 6139 0.837272 GCATAGCCTAGTGGTGGGAA 59.163 55.000 0.00 0.00 35.27 3.97
4214 6140 1.202698 GCATAGCCTAGTGGTGGGAAG 60.203 57.143 0.00 0.00 35.27 3.46
4215 6141 1.417890 CATAGCCTAGTGGTGGGAAGG 59.582 57.143 0.00 0.00 35.27 3.46
4216 6142 0.326238 TAGCCTAGTGGTGGGAAGGG 60.326 60.000 0.00 0.00 35.27 3.95
4217 6143 2.680370 GCCTAGTGGTGGGAAGGGG 61.680 68.421 0.00 0.00 35.27 4.79
4218 6144 2.680370 CCTAGTGGTGGGAAGGGGC 61.680 68.421 0.00 0.00 0.00 5.80
4219 6145 1.616628 CTAGTGGTGGGAAGGGGCT 60.617 63.158 0.00 0.00 0.00 5.19
4220 6146 1.915078 CTAGTGGTGGGAAGGGGCTG 61.915 65.000 0.00 0.00 0.00 4.85
4221 6147 2.409984 TAGTGGTGGGAAGGGGCTGA 62.410 60.000 0.00 0.00 0.00 4.26
4222 6148 2.204291 TGGTGGGAAGGGGCTGAT 60.204 61.111 0.00 0.00 0.00 2.90
4223 6149 2.276740 GGTGGGAAGGGGCTGATG 59.723 66.667 0.00 0.00 0.00 3.07
4224 6150 2.440980 GTGGGAAGGGGCTGATGC 60.441 66.667 0.00 0.00 38.76 3.91
4234 6160 2.440980 GCTGATGCCTTCCCACCC 60.441 66.667 0.00 0.00 0.00 4.61
4235 6161 3.089838 CTGATGCCTTCCCACCCA 58.910 61.111 0.00 0.00 0.00 4.51
4236 6162 1.379044 CTGATGCCTTCCCACCCAC 60.379 63.158 0.00 0.00 0.00 4.61
4237 6163 2.043953 GATGCCTTCCCACCCACC 60.044 66.667 0.00 0.00 0.00 4.61
4238 6164 3.662117 GATGCCTTCCCACCCACCC 62.662 68.421 0.00 0.00 0.00 4.61
4240 6166 4.366684 GCCTTCCCACCCACCCAG 62.367 72.222 0.00 0.00 0.00 4.45
4241 6167 3.661648 CCTTCCCACCCACCCAGG 61.662 72.222 0.00 0.00 37.03 4.45
4242 6168 2.858974 CTTCCCACCCACCCAGGT 60.859 66.667 0.00 0.00 42.40 4.00
4243 6169 2.370403 TTCCCACCCACCCAGGTT 60.370 61.111 0.00 0.00 38.39 3.50
4244 6170 2.426305 CTTCCCACCCACCCAGGTTC 62.426 65.000 0.00 0.00 38.39 3.62
4245 6171 3.182263 CCCACCCACCCAGGTTCA 61.182 66.667 0.00 0.00 38.39 3.18
4246 6172 2.773527 CCCACCCACCCAGGTTCAA 61.774 63.158 0.00 0.00 38.39 2.69
4247 6173 1.228552 CCACCCACCCAGGTTCAAG 60.229 63.158 0.00 0.00 38.39 3.02
4248 6174 1.228552 CACCCACCCAGGTTCAAGG 60.229 63.158 0.00 0.00 38.39 3.61
4249 6175 2.283173 CCCACCCAGGTTCAAGGC 60.283 66.667 0.00 0.00 34.66 4.35
4250 6176 2.520458 CCACCCAGGTTCAAGGCA 59.480 61.111 0.00 0.00 0.00 4.75
4251 6177 1.903404 CCACCCAGGTTCAAGGCAC 60.903 63.158 0.00 0.00 0.00 5.01
4252 6178 1.152777 CACCCAGGTTCAAGGCACA 60.153 57.895 0.00 0.00 0.00 4.57
4253 6179 1.151450 ACCCAGGTTCAAGGCACAG 59.849 57.895 0.00 0.00 0.00 3.66
4254 6180 1.151450 CCCAGGTTCAAGGCACAGT 59.849 57.895 0.00 0.00 0.00 3.55
4255 6181 0.400213 CCCAGGTTCAAGGCACAGTA 59.600 55.000 0.00 0.00 0.00 2.74
4256 6182 1.523758 CCAGGTTCAAGGCACAGTAC 58.476 55.000 0.00 0.00 0.00 2.73
4257 6183 1.072331 CCAGGTTCAAGGCACAGTACT 59.928 52.381 0.00 0.00 0.00 2.73
4258 6184 2.487265 CCAGGTTCAAGGCACAGTACTT 60.487 50.000 0.00 0.00 0.00 2.24
4259 6185 2.549754 CAGGTTCAAGGCACAGTACTTG 59.450 50.000 9.79 9.79 44.09 3.16
4260 6186 1.266989 GGTTCAAGGCACAGTACTTGC 59.733 52.381 16.84 16.84 42.82 4.01
4261 6187 1.946768 GTTCAAGGCACAGTACTTGCA 59.053 47.619 22.76 7.58 42.82 4.08
4262 6188 2.340210 TCAAGGCACAGTACTTGCAA 57.660 45.000 22.76 0.00 42.82 4.08
4263 6189 2.862541 TCAAGGCACAGTACTTGCAAT 58.137 42.857 22.76 13.10 42.82 3.56
4264 6190 3.221771 TCAAGGCACAGTACTTGCAATT 58.778 40.909 22.76 16.55 42.82 2.32
4265 6191 3.636300 TCAAGGCACAGTACTTGCAATTT 59.364 39.130 22.76 14.63 42.82 1.82
4266 6192 3.648339 AGGCACAGTACTTGCAATTTG 57.352 42.857 22.76 0.00 42.12 2.32
4267 6193 2.061028 GGCACAGTACTTGCAATTTGC 58.939 47.619 22.76 14.49 45.29 3.68
4278 6204 1.729003 GCAATTTGCGTTTGTTGCAC 58.271 45.000 5.49 0.00 44.63 4.57
4279 6205 1.594276 GCAATTTGCGTTTGTTGCACC 60.594 47.619 5.49 0.00 44.63 5.01
4280 6206 1.662629 CAATTTGCGTTTGTTGCACCA 59.337 42.857 0.00 0.00 43.10 4.17
4281 6207 2.015736 ATTTGCGTTTGTTGCACCAA 57.984 40.000 0.00 0.00 43.10 3.67
4282 6208 2.015736 TTTGCGTTTGTTGCACCAAT 57.984 40.000 0.00 0.00 43.10 3.16
4283 6209 2.015736 TTGCGTTTGTTGCACCAATT 57.984 40.000 0.00 0.00 43.10 2.32
4284 6210 2.871182 TGCGTTTGTTGCACCAATTA 57.129 40.000 0.00 0.00 37.44 1.40
4285 6211 3.377346 TGCGTTTGTTGCACCAATTAT 57.623 38.095 0.00 0.00 37.44 1.28
4286 6212 4.505313 TGCGTTTGTTGCACCAATTATA 57.495 36.364 0.00 0.00 37.44 0.98
4287 6213 4.230657 TGCGTTTGTTGCACCAATTATAC 58.769 39.130 0.00 0.00 37.44 1.47
4288 6214 4.022762 TGCGTTTGTTGCACCAATTATACT 60.023 37.500 0.00 0.00 37.44 2.12
4289 6215 4.323336 GCGTTTGTTGCACCAATTATACTG 59.677 41.667 0.00 0.00 0.00 2.74
4290 6216 5.457140 CGTTTGTTGCACCAATTATACTGT 58.543 37.500 0.00 0.00 0.00 3.55
4291 6217 5.341993 CGTTTGTTGCACCAATTATACTGTG 59.658 40.000 0.00 0.00 0.00 3.66
4292 6218 5.384063 TTGTTGCACCAATTATACTGTGG 57.616 39.130 0.00 0.00 38.46 4.17
4293 6219 3.761218 TGTTGCACCAATTATACTGTGGG 59.239 43.478 0.00 0.00 36.69 4.61
4294 6220 3.011566 TGCACCAATTATACTGTGGGG 57.988 47.619 0.00 0.00 38.97 4.96
4295 6221 2.306847 GCACCAATTATACTGTGGGGG 58.693 52.381 0.00 0.00 36.26 5.40
4312 6238 2.783609 GGGGTTCCCTTACAGTCTTC 57.216 55.000 7.87 0.00 41.34 2.87
4313 6239 1.281287 GGGGTTCCCTTACAGTCTTCC 59.719 57.143 7.87 0.00 41.34 3.46
4314 6240 2.267192 GGGTTCCCTTACAGTCTTCCT 58.733 52.381 0.00 0.00 0.00 3.36
4315 6241 3.447950 GGGTTCCCTTACAGTCTTCCTA 58.552 50.000 0.00 0.00 0.00 2.94
4316 6242 4.038633 GGGTTCCCTTACAGTCTTCCTAT 58.961 47.826 0.00 0.00 0.00 2.57
4317 6243 4.101274 GGGTTCCCTTACAGTCTTCCTATC 59.899 50.000 0.00 0.00 0.00 2.08
4318 6244 4.715297 GGTTCCCTTACAGTCTTCCTATCA 59.285 45.833 0.00 0.00 0.00 2.15
4319 6245 5.189145 GGTTCCCTTACAGTCTTCCTATCAA 59.811 44.000 0.00 0.00 0.00 2.57
4320 6246 6.296259 GGTTCCCTTACAGTCTTCCTATCAAA 60.296 42.308 0.00 0.00 0.00 2.69
4321 6247 6.295719 TCCCTTACAGTCTTCCTATCAAAC 57.704 41.667 0.00 0.00 0.00 2.93
4322 6248 5.783360 TCCCTTACAGTCTTCCTATCAAACA 59.217 40.000 0.00 0.00 0.00 2.83
4323 6249 6.271391 TCCCTTACAGTCTTCCTATCAAACAA 59.729 38.462 0.00 0.00 0.00 2.83
4324 6250 6.940298 CCCTTACAGTCTTCCTATCAAACAAA 59.060 38.462 0.00 0.00 0.00 2.83
4325 6251 7.447238 CCCTTACAGTCTTCCTATCAAACAAAA 59.553 37.037 0.00 0.00 0.00 2.44
4326 6252 8.846211 CCTTACAGTCTTCCTATCAAACAAAAA 58.154 33.333 0.00 0.00 0.00 1.94
4355 6281 6.688578 TGAAGCCGACAACTATTATCCTATC 58.311 40.000 0.00 0.00 0.00 2.08
4383 6309 5.306114 AGGCACACTTAGTTACTCCTTTT 57.694 39.130 0.00 0.00 0.00 2.27
4406 6332 3.191078 TGGCAATTGGGTGTTTCTTTG 57.809 42.857 7.72 0.00 0.00 2.77
4446 6372 4.081365 TGGACTATCGTTGCATGAGGTTTA 60.081 41.667 0.00 0.00 0.00 2.01
4547 6473 6.126883 ACGAATAGGGTTGTCCATAGAATTGA 60.127 38.462 0.00 0.00 38.24 2.57
4663 6589 4.264253 CCTTGCACAAATCTCATACTGGA 58.736 43.478 0.00 0.00 0.00 3.86
4730 6656 4.222124 TGGTCCTCTAAGCTTTGATTCC 57.778 45.455 11.05 13.03 0.00 3.01
4734 6660 5.338789 GGTCCTCTAAGCTTTGATTCCTCTT 60.339 44.000 11.05 0.00 0.00 2.85
4804 6731 5.247507 TGCATGCCTTCACATATGTTTAC 57.752 39.130 16.68 0.00 0.00 2.01
5074 7004 9.003658 AGGTATTTTTCACTTCACATAGTTCAG 57.996 33.333 0.00 0.00 0.00 3.02
5139 7070 9.748708 AATTTCACATATGTTTTGGATATTCCG 57.251 29.630 5.37 0.00 40.17 4.30
5294 7225 9.169468 GAACAAACACACTAAAACATGTCTATG 57.831 33.333 0.00 0.00 40.24 2.23
5300 7231 9.502091 ACACACTAAAACATGTCTATGTACATT 57.498 29.630 14.77 0.00 46.54 2.71
5406 7339 7.786046 TCCTTTTGATAACAGGTGTACTCTA 57.214 36.000 0.00 0.00 0.00 2.43
5473 7406 9.502091 TCATCTACAATGCTATAATGTTAACCC 57.498 33.333 2.48 0.00 0.00 4.11
5485 7418 3.298686 TGTTAACCCAACATGACACCA 57.701 42.857 0.00 0.00 42.29 4.17
5495 7428 7.068702 ACCCAACATGACACCATTATTATGAT 58.931 34.615 0.00 0.00 33.37 2.45
5738 7685 9.051259 AGACCATATGTAGGATAACTTATGCAT 57.949 33.333 3.79 3.79 36.71 3.96
5776 7723 3.921677 TCACTTGACACGGATAGAAACC 58.078 45.455 0.00 0.00 0.00 3.27
5797 7744 5.934781 ACCCATTTTTGATAAAACTTGGCA 58.065 33.333 8.57 0.00 36.15 4.92
5902 7849 0.973632 TAGCGAGTGCCTTTGGAGAA 59.026 50.000 0.00 0.00 44.31 2.87
5942 7889 8.243426 TGAGAATGAACACAAAAGGTATATTGC 58.757 33.333 0.00 0.00 0.00 3.56
5956 7903 7.264373 AGGTATATTGCTGAAATGTTAGTGC 57.736 36.000 0.00 0.00 0.00 4.40
6150 8101 2.544069 GCTAGACAACGATGAGCTACCC 60.544 54.545 0.00 0.00 0.00 3.69
6165 8116 5.899547 TGAGCTACCCTGAATTCTAGAATCA 59.100 40.000 18.19 15.34 0.00 2.57
6243 8197 7.669427 TGTTTATTTGATTGCTTCCATCTTGT 58.331 30.769 0.00 0.00 0.00 3.16
6362 8316 2.978489 CCAGTTGAGTTCGACTACGTTC 59.022 50.000 0.00 0.00 38.50 3.95
6554 8518 2.043411 CGTTTCGACTTGCCAAATGTG 58.957 47.619 0.00 0.00 0.00 3.21
6594 8558 9.890085 CGATCAAATTAAATGTGCATTACAAAG 57.110 29.630 0.00 0.00 43.77 2.77
6671 8637 5.511729 GGAAACTTGTGTTGTTTTTCTCTCG 59.488 40.000 0.00 0.00 37.70 4.04
6773 8805 5.483685 TGTGTAGATGTTAACCTTCTGCT 57.516 39.130 18.08 5.34 33.08 4.24
6810 8842 6.604396 ACAGAGCATTTCATCCATATGTTTGA 59.396 34.615 1.24 1.53 34.50 2.69
6811 8843 7.123098 ACAGAGCATTTCATCCATATGTTTGAA 59.877 33.333 11.51 11.51 34.50 2.69
6861 8893 9.797556 AAAGTTTGTGGACAAAAGTTTATAGAC 57.202 29.630 6.52 0.00 46.08 2.59
6867 8899 7.441157 TGTGGACAAAAGTTTATAGACACTCTG 59.559 37.037 0.00 0.00 0.00 3.35
6953 8993 7.461182 TTTTGTAAATTGTGGGATCACTAGG 57.539 36.000 0.00 0.00 43.94 3.02
6964 9004 3.515562 GGATCACTAGGGTCCATGAGAT 58.484 50.000 8.29 0.00 32.23 2.75
6976 9016 4.514441 GGTCCATGAGATAAATGTCAGCAG 59.486 45.833 0.00 0.00 33.33 4.24
7009 9053 6.072008 CCATGACTTGTCATTGTGTAAATGGA 60.072 38.462 12.95 0.00 32.73 3.41
7019 9063 9.482627 GTCATTGTGTAAATGGAAAACCAATTA 57.517 29.630 0.00 0.00 0.00 1.40
7282 9341 5.432885 AGAAATTTTCTAACCCACACACG 57.567 39.130 9.92 0.00 38.49 4.49
7354 9413 1.750778 CATGGATTGCCCTGGTTACAC 59.249 52.381 0.00 0.00 35.38 2.90
7587 9650 6.717084 TGGTTGGTGATAACATATGTCAAACA 59.283 34.615 15.61 15.61 30.27 2.83
7914 9977 0.329596 AGGAAGACCTGCCCATGTTC 59.670 55.000 0.00 0.00 45.92 3.18
7967 10030 4.398044 CCATATTGATCATGCTGCATGCTA 59.602 41.667 32.23 19.81 41.18 3.49
8061 10124 6.944096 TGTCAAATAAAATGGCATGGATGAA 58.056 32.000 0.00 0.00 0.00 2.57
8143 10222 2.769893 GCAACAAACATGCATCCCTTT 58.230 42.857 0.00 0.00 43.29 3.11
8160 10239 7.041984 GCATCCCTTTTACTTAAATCGACCTAG 60.042 40.741 0.00 0.00 0.00 3.02
8208 10296 9.237187 TGTTTAGATGTGAGGCAACATAATAAA 57.763 29.630 5.89 10.59 40.87 1.40
8274 10362 2.275380 GCACCCCAGGAACGCAAAT 61.275 57.895 0.00 0.00 0.00 2.32
8360 10450 3.657398 TCTCCTGACATGAATTGGCAT 57.343 42.857 0.00 0.00 44.33 4.40
8363 10453 5.508567 TCTCCTGACATGAATTGGCATTAA 58.491 37.500 0.00 0.00 44.33 1.40
8369 10459 6.757237 TGACATGAATTGGCATTAAACTTGT 58.243 32.000 0.00 0.00 38.92 3.16
8405 10497 2.401583 TGCTCTTACATGCCACGAAT 57.598 45.000 0.00 0.00 0.00 3.34
8417 10509 1.604604 CCACGAATCAACACCTGGTT 58.395 50.000 0.00 0.00 41.47 3.67
8452 10544 7.087639 CGGTAAAATGAAGAAACTTGGCAATA 58.912 34.615 0.00 0.00 0.00 1.90
8484 10577 6.239120 GCAAAAGGAGGCATATCATACAACAT 60.239 38.462 0.00 0.00 0.00 2.71
8539 10632 1.719780 GCACCGTTACTGAAGTTCTCG 59.280 52.381 4.17 0.00 0.00 4.04
8580 10673 1.372087 GCATGAGAAGCCCCTCAACG 61.372 60.000 9.34 5.80 45.22 4.10
8711 10805 7.039223 GGGAGTTTCTAGACCATATTAATCGGA 60.039 40.741 10.13 0.00 0.00 4.55
8713 10807 8.707796 AGTTTCTAGACCATATTAATCGGAGA 57.292 34.615 10.13 1.65 45.75 3.71
8714 10808 9.144298 AGTTTCTAGACCATATTAATCGGAGAA 57.856 33.333 10.13 6.60 43.58 2.87
8725 10819 8.861101 CATATTAATCGGAGAAATAGGTCGTTC 58.139 37.037 0.00 0.00 43.58 3.95
8855 10950 2.355363 GTGTAGTGTCACGCCGCA 60.355 61.111 0.00 0.00 0.00 5.69
8884 10979 5.105554 TGTTGGCACATGTTTGTTTTCTACT 60.106 36.000 0.00 0.00 39.30 2.57
8916 11011 7.333528 TGCCAATTCAGTTATTACTCCATTC 57.666 36.000 0.00 0.00 30.26 2.67
8943 11038 6.968263 TCACCAACAAATGAGTCCAAATAA 57.032 33.333 0.00 0.00 0.00 1.40
8945 11040 5.925969 CACCAACAAATGAGTCCAAATAACC 59.074 40.000 0.00 0.00 0.00 2.85
8994 11089 6.106648 TCATCACCATCTATAGCAGAAAGG 57.893 41.667 0.00 0.00 36.67 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
210 212 7.495279 TGAGCAGTTTTTAATGCAGAATTTTGT 59.505 29.630 0.00 0.00 45.01 2.83
211 213 7.853524 TGAGCAGTTTTTAATGCAGAATTTTG 58.146 30.769 0.00 0.00 45.01 2.44
338 353 7.815549 AGTTTTTGGTACTTAGTTGTGGTTTTG 59.184 33.333 0.00 0.00 0.00 2.44
353 368 9.575783 TTTTGTCTCATTGTAAGTTTTTGGTAC 57.424 29.630 0.00 0.00 0.00 3.34
383 399 1.660560 TAACGAGCGCTCCACCCTAC 61.661 60.000 30.66 5.04 0.00 3.18
482 500 2.921754 CGAAAGCGTTATCGAAAGGTCT 59.078 45.455 0.00 0.00 41.43 3.85
499 517 1.209261 TCAGATGCACCATAGGCGAAA 59.791 47.619 0.00 0.00 0.00 3.46
530 548 2.203337 GTTGCCACCAGTGCCAGA 60.203 61.111 0.00 0.00 0.00 3.86
637 657 9.807649 AGAAATGATTTTGCACCAGTATTAATC 57.192 29.630 0.00 0.00 0.00 1.75
719 1963 8.543774 ACATGTACCAGAGAAAGATTTACATCT 58.456 33.333 0.00 0.00 42.05 2.90
720 1964 8.723942 ACATGTACCAGAGAAAGATTTACATC 57.276 34.615 0.00 0.00 0.00 3.06
721 1965 8.321353 TGACATGTACCAGAGAAAGATTTACAT 58.679 33.333 0.00 0.00 0.00 2.29
722 1966 7.676004 TGACATGTACCAGAGAAAGATTTACA 58.324 34.615 0.00 0.00 0.00 2.41
723 1967 7.278868 CCTGACATGTACCAGAGAAAGATTTAC 59.721 40.741 14.48 0.00 32.37 2.01
724 1968 7.331026 CCTGACATGTACCAGAGAAAGATTTA 58.669 38.462 14.48 0.00 32.37 1.40
725 1969 6.176183 CCTGACATGTACCAGAGAAAGATTT 58.824 40.000 14.48 0.00 32.37 2.17
726 1970 5.738909 CCTGACATGTACCAGAGAAAGATT 58.261 41.667 14.48 0.00 32.37 2.40
727 1971 4.383552 GCCTGACATGTACCAGAGAAAGAT 60.384 45.833 14.48 0.00 32.37 2.40
728 1972 3.055819 GCCTGACATGTACCAGAGAAAGA 60.056 47.826 14.48 0.00 32.37 2.52
729 1973 3.265791 GCCTGACATGTACCAGAGAAAG 58.734 50.000 14.48 1.10 32.37 2.62
730 1974 2.027192 GGCCTGACATGTACCAGAGAAA 60.027 50.000 14.48 0.00 32.37 2.52
731 1975 1.555075 GGCCTGACATGTACCAGAGAA 59.445 52.381 14.48 0.00 32.37 2.87
732 1976 1.195115 GGCCTGACATGTACCAGAGA 58.805 55.000 14.48 0.00 32.37 3.10
733 1977 0.904649 TGGCCTGACATGTACCAGAG 59.095 55.000 14.48 7.19 32.37 3.35
734 1978 1.357137 TTGGCCTGACATGTACCAGA 58.643 50.000 14.48 3.07 32.37 3.86
735 1979 2.292267 GATTGGCCTGACATGTACCAG 58.708 52.381 3.32 2.58 0.00 4.00
736 1980 1.406751 CGATTGGCCTGACATGTACCA 60.407 52.381 3.32 1.43 0.00 3.25
737 1981 1.299541 CGATTGGCCTGACATGTACC 58.700 55.000 3.32 0.00 0.00 3.34
738 1982 1.299541 CCGATTGGCCTGACATGTAC 58.700 55.000 3.32 0.00 0.00 2.90
739 1983 0.908910 ACCGATTGGCCTGACATGTA 59.091 50.000 3.32 0.00 39.70 2.29
740 1984 0.908910 TACCGATTGGCCTGACATGT 59.091 50.000 3.32 0.00 39.70 3.21
741 1985 2.260844 ATACCGATTGGCCTGACATG 57.739 50.000 3.32 0.00 39.70 3.21
742 1986 4.431416 TTTATACCGATTGGCCTGACAT 57.569 40.909 3.32 0.00 39.70 3.06
743 1987 3.916359 TTTATACCGATTGGCCTGACA 57.084 42.857 3.32 0.00 39.70 3.58
744 1988 4.196971 AGTTTTATACCGATTGGCCTGAC 58.803 43.478 3.32 0.00 39.70 3.51
745 1989 4.497291 AGTTTTATACCGATTGGCCTGA 57.503 40.909 3.32 0.00 39.70 3.86
746 1990 6.877611 ATTAGTTTTATACCGATTGGCCTG 57.122 37.500 3.32 0.00 39.70 4.85
747 1991 7.057894 TCAATTAGTTTTATACCGATTGGCCT 58.942 34.615 3.32 0.00 39.70 5.19
748 1992 7.266922 TCAATTAGTTTTATACCGATTGGCC 57.733 36.000 0.00 0.00 39.70 5.36
755 1999 9.525007 GCGTGATATTCAATTAGTTTTATACCG 57.475 33.333 0.00 0.00 0.00 4.02
773 2017 9.117145 CGCATTAAATAAAGATTTGCGTGATAT 57.883 29.630 6.26 0.00 41.57 1.63
774 2018 7.112844 GCGCATTAAATAAAGATTTGCGTGATA 59.887 33.333 14.66 0.00 45.29 2.15
775 2019 6.074888 GCGCATTAAATAAAGATTTGCGTGAT 60.075 34.615 14.66 0.00 45.29 3.06
776 2020 5.229052 GCGCATTAAATAAAGATTTGCGTGA 59.771 36.000 14.66 0.00 45.29 4.35
777 2021 5.004251 TGCGCATTAAATAAAGATTTGCGTG 59.996 36.000 5.66 3.57 45.29 5.34
778 2022 5.098893 TGCGCATTAAATAAAGATTTGCGT 58.901 33.333 5.66 0.00 45.29 5.24
779 2023 5.618562 TGCGCATTAAATAAAGATTTGCG 57.381 34.783 5.66 9.76 45.84 4.85
780 2024 8.652592 TTTTTGCGCATTAAATAAAGATTTGC 57.347 26.923 12.75 0.00 35.96 3.68
838 2082 9.676195 CACACAAAATATTGTCACTAATGTCAA 57.324 29.630 0.00 0.00 46.78 3.18
839 2083 7.807433 GCACACAAAATATTGTCACTAATGTCA 59.193 33.333 0.00 0.00 46.78 3.58
840 2084 7.807433 TGCACACAAAATATTGTCACTAATGTC 59.193 33.333 0.00 0.00 46.78 3.06
841 2085 7.656412 TGCACACAAAATATTGTCACTAATGT 58.344 30.769 0.00 0.00 46.78 2.71
842 2086 8.692110 ATGCACACAAAATATTGTCACTAATG 57.308 30.769 0.00 0.00 46.78 1.90
846 2090 9.709495 ATTTAATGCACACAAAATATTGTCACT 57.291 25.926 0.00 0.00 46.78 3.41
856 2100 9.823098 GCAAATCATTATTTAATGCACACAAAA 57.177 25.926 5.59 0.00 42.06 2.44
857 2101 8.996271 TGCAAATCATTATTTAATGCACACAAA 58.004 25.926 5.59 0.00 42.06 2.83
858 2102 8.441608 GTGCAAATCATTATTTAATGCACACAA 58.558 29.630 19.53 0.00 46.77 3.33
859 2103 7.961855 GTGCAAATCATTATTTAATGCACACA 58.038 30.769 19.53 5.53 46.77 3.72
899 2143 9.899661 AGTACATGTCAAGCTAAACCATATAAA 57.100 29.630 0.00 0.00 0.00 1.40
902 2146 8.924303 TCTAGTACATGTCAAGCTAAACCATAT 58.076 33.333 0.00 0.00 0.00 1.78
903 2147 8.301252 TCTAGTACATGTCAAGCTAAACCATA 57.699 34.615 0.00 0.00 0.00 2.74
904 2148 7.124298 TCTCTAGTACATGTCAAGCTAAACCAT 59.876 37.037 0.00 0.00 0.00 3.55
905 2149 6.436218 TCTCTAGTACATGTCAAGCTAAACCA 59.564 38.462 0.00 0.00 0.00 3.67
906 2150 6.864342 TCTCTAGTACATGTCAAGCTAAACC 58.136 40.000 0.00 0.00 0.00 3.27
907 2151 8.758633 TTTCTCTAGTACATGTCAAGCTAAAC 57.241 34.615 0.00 0.00 0.00 2.01
908 2152 8.803235 TCTTTCTCTAGTACATGTCAAGCTAAA 58.197 33.333 0.00 2.42 0.00 1.85
909 2153 8.244802 GTCTTTCTCTAGTACATGTCAAGCTAA 58.755 37.037 0.00 0.00 0.00 3.09
910 2154 7.393515 TGTCTTTCTCTAGTACATGTCAAGCTA 59.606 37.037 0.00 0.58 0.00 3.32
911 2155 6.209589 TGTCTTTCTCTAGTACATGTCAAGCT 59.790 38.462 0.00 0.00 0.00 3.74
912 2156 6.309251 GTGTCTTTCTCTAGTACATGTCAAGC 59.691 42.308 0.00 0.00 0.00 4.01
913 2157 7.371159 TGTGTCTTTCTCTAGTACATGTCAAG 58.629 38.462 0.00 0.00 0.00 3.02
914 2158 7.284919 TGTGTCTTTCTCTAGTACATGTCAA 57.715 36.000 0.00 0.00 0.00 3.18
915 2159 6.894339 TGTGTCTTTCTCTAGTACATGTCA 57.106 37.500 0.00 0.00 0.00 3.58
916 2160 8.589335 TTTTGTGTCTTTCTCTAGTACATGTC 57.411 34.615 0.00 0.00 0.00 3.06
917 2161 8.958119 TTTTTGTGTCTTTCTCTAGTACATGT 57.042 30.769 2.69 2.69 0.00 3.21
923 2167 9.220767 GACCATATTTTTGTGTCTTTCTCTAGT 57.779 33.333 0.00 0.00 0.00 2.57
924 2168 9.442047 AGACCATATTTTTGTGTCTTTCTCTAG 57.558 33.333 0.00 0.00 32.61 2.43
926 2170 9.965902 ATAGACCATATTTTTGTGTCTTTCTCT 57.034 29.630 0.00 0.00 37.47 3.10
942 2186 8.314751 GCAACCAGAACTGTATATAGACCATAT 58.685 37.037 3.17 0.00 34.14 1.78
943 2187 7.256190 GGCAACCAGAACTGTATATAGACCATA 60.256 40.741 3.17 0.00 0.00 2.74
944 2188 6.464465 GGCAACCAGAACTGTATATAGACCAT 60.464 42.308 3.17 0.00 0.00 3.55
945 2189 5.163343 GGCAACCAGAACTGTATATAGACCA 60.163 44.000 3.17 0.00 0.00 4.02
946 2190 5.298347 GGCAACCAGAACTGTATATAGACC 58.702 45.833 3.17 0.00 0.00 3.85
964 2208 4.712476 AGATGAAGATCACTATGGGCAAC 58.288 43.478 0.00 0.00 0.00 4.17
965 2209 6.692849 ATAGATGAAGATCACTATGGGCAA 57.307 37.500 0.00 0.00 0.00 4.52
966 2210 6.692849 AATAGATGAAGATCACTATGGGCA 57.307 37.500 0.00 0.00 0.00 5.36
967 2211 7.615403 TGTAATAGATGAAGATCACTATGGGC 58.385 38.462 0.00 0.00 0.00 5.36
999 2243 8.663025 CGTCGAAGTAGATTAAGCCTATACATA 58.337 37.037 0.00 0.00 0.00 2.29
1000 2244 7.389884 TCGTCGAAGTAGATTAAGCCTATACAT 59.610 37.037 0.00 0.00 0.00 2.29
1001 2245 6.707608 TCGTCGAAGTAGATTAAGCCTATACA 59.292 38.462 0.00 0.00 0.00 2.29
1002 2246 7.014702 GTCGTCGAAGTAGATTAAGCCTATAC 58.985 42.308 0.00 0.00 0.00 1.47
1003 2247 6.148480 GGTCGTCGAAGTAGATTAAGCCTATA 59.852 42.308 0.00 0.00 0.00 1.31
1004 2248 5.048852 GGTCGTCGAAGTAGATTAAGCCTAT 60.049 44.000 0.00 0.00 0.00 2.57
1005 2249 4.274459 GGTCGTCGAAGTAGATTAAGCCTA 59.726 45.833 0.00 0.00 0.00 3.93
1006 2250 3.066481 GGTCGTCGAAGTAGATTAAGCCT 59.934 47.826 0.00 0.00 0.00 4.58
1007 2251 3.181493 TGGTCGTCGAAGTAGATTAAGCC 60.181 47.826 0.00 0.00 0.00 4.35
1008 2252 4.025015 TGGTCGTCGAAGTAGATTAAGC 57.975 45.455 0.00 0.00 0.00 3.09
1009 2253 6.508088 GCAATTGGTCGTCGAAGTAGATTAAG 60.508 42.308 7.72 0.00 0.00 1.85
1010 2254 5.290158 GCAATTGGTCGTCGAAGTAGATTAA 59.710 40.000 7.72 0.00 0.00 1.40
1011 2255 4.802039 GCAATTGGTCGTCGAAGTAGATTA 59.198 41.667 7.72 0.00 0.00 1.75
1012 2256 3.617263 GCAATTGGTCGTCGAAGTAGATT 59.383 43.478 7.72 0.00 0.00 2.40
1013 2257 3.187700 GCAATTGGTCGTCGAAGTAGAT 58.812 45.455 7.72 0.00 0.00 1.98
1014 2258 2.602878 GCAATTGGTCGTCGAAGTAGA 58.397 47.619 7.72 0.00 0.00 2.59
1015 2259 1.659098 GGCAATTGGTCGTCGAAGTAG 59.341 52.381 7.72 0.00 0.00 2.57
1016 2260 1.274167 AGGCAATTGGTCGTCGAAGTA 59.726 47.619 7.72 0.00 0.00 2.24
1017 2261 0.034896 AGGCAATTGGTCGTCGAAGT 59.965 50.000 7.72 0.00 0.00 3.01
1018 2262 1.156736 AAGGCAATTGGTCGTCGAAG 58.843 50.000 7.72 0.00 0.00 3.79
1019 2263 2.459060 TAAGGCAATTGGTCGTCGAA 57.541 45.000 7.72 0.00 0.00 3.71
1020 2264 2.276201 CATAAGGCAATTGGTCGTCGA 58.724 47.619 7.72 0.00 0.00 4.20
1021 2265 2.006888 ACATAAGGCAATTGGTCGTCG 58.993 47.619 7.72 0.00 0.00 5.12
1022 2266 4.156008 AGAAACATAAGGCAATTGGTCGTC 59.844 41.667 7.72 0.00 0.00 4.20
1023 2267 4.079253 AGAAACATAAGGCAATTGGTCGT 58.921 39.130 7.72 0.00 0.00 4.34
1024 2268 4.701956 AGAAACATAAGGCAATTGGTCG 57.298 40.909 7.72 0.00 0.00 4.79
1025 2269 9.087424 GATAAAAGAAACATAAGGCAATTGGTC 57.913 33.333 7.72 0.00 0.00 4.02
1026 2270 8.592809 TGATAAAAGAAACATAAGGCAATTGGT 58.407 29.630 7.72 0.00 0.00 3.67
1027 2271 8.872845 GTGATAAAAGAAACATAAGGCAATTGG 58.127 33.333 7.72 0.00 0.00 3.16
1028 2272 8.586273 CGTGATAAAAGAAACATAAGGCAATTG 58.414 33.333 0.00 0.00 0.00 2.32
1029 2273 7.275560 GCGTGATAAAAGAAACATAAGGCAATT 59.724 33.333 0.00 0.00 0.00 2.32
1030 2274 6.751888 GCGTGATAAAAGAAACATAAGGCAAT 59.248 34.615 0.00 0.00 0.00 3.56
1031 2275 6.072175 AGCGTGATAAAAGAAACATAAGGCAA 60.072 34.615 0.00 0.00 0.00 4.52
1032 2276 5.414454 AGCGTGATAAAAGAAACATAAGGCA 59.586 36.000 0.00 0.00 0.00 4.75
1033 2277 5.880341 AGCGTGATAAAAGAAACATAAGGC 58.120 37.500 0.00 0.00 0.00 4.35
1034 2278 7.072177 TGAGCGTGATAAAAGAAACATAAGG 57.928 36.000 0.00 0.00 0.00 2.69
1043 2287 9.337396 ACCAATATTAATGAGCGTGATAAAAGA 57.663 29.630 0.00 0.00 0.00 2.52
1044 2288 9.385902 CACCAATATTAATGAGCGTGATAAAAG 57.614 33.333 0.00 0.00 0.00 2.27
1045 2289 7.860373 GCACCAATATTAATGAGCGTGATAAAA 59.140 33.333 0.00 0.00 0.00 1.52
1046 2290 7.012799 TGCACCAATATTAATGAGCGTGATAAA 59.987 33.333 0.00 0.00 0.00 1.40
1047 2291 6.484977 TGCACCAATATTAATGAGCGTGATAA 59.515 34.615 0.00 0.00 0.00 1.75
1048 2292 5.994668 TGCACCAATATTAATGAGCGTGATA 59.005 36.000 0.00 0.00 0.00 2.15
1049 2293 4.821260 TGCACCAATATTAATGAGCGTGAT 59.179 37.500 0.00 0.00 0.00 3.06
1050 2294 4.195416 TGCACCAATATTAATGAGCGTGA 58.805 39.130 0.00 0.00 0.00 4.35
1051 2295 4.550577 TGCACCAATATTAATGAGCGTG 57.449 40.909 0.00 1.26 0.00 5.34
1052 2296 5.574891 TTTGCACCAATATTAATGAGCGT 57.425 34.783 0.00 0.00 0.00 5.07
1053 2297 6.884096 TTTTTGCACCAATATTAATGAGCG 57.116 33.333 0.00 0.00 0.00 5.03
1097 2341 9.421806 TGATTTCGCACAAATTTTAATGAATCT 57.578 25.926 0.00 0.00 0.00 2.40
1107 2351 9.971744 GCTTAATAAATGATTTCGCACAAATTT 57.028 25.926 0.00 0.00 0.00 1.82
1108 2352 9.149225 TGCTTAATAAATGATTTCGCACAAATT 57.851 25.926 0.00 0.00 30.84 1.82
1109 2353 8.594687 GTGCTTAATAAATGATTTCGCACAAAT 58.405 29.630 16.65 0.00 44.11 2.32
1110 2354 7.812191 AGTGCTTAATAAATGATTTCGCACAAA 59.188 29.630 20.33 0.00 45.49 2.83
1111 2355 7.312154 AGTGCTTAATAAATGATTTCGCACAA 58.688 30.769 20.33 0.00 45.49 3.33
1112 2356 6.851609 AGTGCTTAATAAATGATTTCGCACA 58.148 32.000 20.33 4.22 45.49 4.57
1113 2357 7.189512 AGAGTGCTTAATAAATGATTTCGCAC 58.810 34.615 15.08 15.08 44.54 5.34
1114 2358 7.320443 AGAGTGCTTAATAAATGATTTCGCA 57.680 32.000 0.00 0.00 32.38 5.10
1115 2359 9.884465 AATAGAGTGCTTAATAAATGATTTCGC 57.116 29.630 0.00 0.00 0.00 4.70
1144 2388 9.405587 CGTGTGGTTTAATGACATTAAAGAAAT 57.594 29.630 26.37 0.00 43.21 2.17
1145 2389 8.622157 TCGTGTGGTTTAATGACATTAAAGAAA 58.378 29.630 26.37 15.62 43.21 2.52
1146 2390 8.155821 TCGTGTGGTTTAATGACATTAAAGAA 57.844 30.769 26.37 17.53 43.21 2.52
1147 2391 7.731882 TCGTGTGGTTTAATGACATTAAAGA 57.268 32.000 26.37 18.24 43.21 2.52
1154 2398 9.607988 AGATAAATATCGTGTGGTTTAATGACA 57.392 29.630 0.00 0.00 37.76 3.58
1222 2466 9.490663 GTGTGATATTCAGTTAGTTTTGTATGC 57.509 33.333 0.00 0.00 0.00 3.14
1465 2743 7.626028 GCCGAAGTAGACTAAGCCTATACATAC 60.626 44.444 0.00 0.00 0.00 2.39
1801 3361 5.615289 AGTCCTTCCAACATAGATATGTGC 58.385 41.667 6.26 0.00 45.55 4.57
1905 3473 9.796120 CCACTTTGAAATTTTACTCTAACACAA 57.204 29.630 0.00 0.00 0.00 3.33
1907 3475 9.797556 AACCACTTTGAAATTTTACTCTAACAC 57.202 29.630 0.00 0.00 0.00 3.32
2078 3961 1.613437 ACAAAATCTTTGGCCGGTGAG 59.387 47.619 1.90 0.00 0.00 3.51
2259 4146 5.109903 GGTCACTGCACCTAACAACTATAG 58.890 45.833 0.00 0.00 33.08 1.31
2262 4149 2.038033 GGGTCACTGCACCTAACAACTA 59.962 50.000 0.00 0.00 36.57 2.24
2264 4151 1.235724 GGGTCACTGCACCTAACAAC 58.764 55.000 0.00 0.00 36.57 3.32
2267 4154 2.200373 ATTGGGTCACTGCACCTAAC 57.800 50.000 0.00 0.00 39.52 2.34
2300 4187 7.205297 ACATGCCATGTTGCTTATTTTAGATC 58.795 34.615 4.03 0.00 41.63 2.75
2406 4293 2.014857 AGCTGCAGTGCAACATCATAG 58.985 47.619 20.22 5.80 41.43 2.23
2494 4381 4.352009 TCATGACATTTGCCCAAACCTAT 58.648 39.130 0.00 0.00 32.51 2.57
2535 4422 4.424626 AGTACATGCGGATATTCATAGCG 58.575 43.478 0.00 0.00 0.00 4.26
2536 4423 6.796426 TCTAGTACATGCGGATATTCATAGC 58.204 40.000 0.00 0.00 0.00 2.97
2600 4487 0.035820 TCGGCTTGGTGGGTGTTATC 60.036 55.000 0.00 0.00 0.00 1.75
2697 4584 6.726764 AGGATGACTATAAAGGCTACCTTAGG 59.273 42.308 0.00 0.00 43.92 2.69
2862 4751 8.948631 TTATGCAAGTTTTCCAAAATAACACA 57.051 26.923 0.00 0.00 0.00 3.72
2881 4770 5.062528 TGCTAATGTTCGGATCATTATGCA 58.937 37.500 23.61 23.61 38.25 3.96
3006 4923 6.591001 ACAAGGTGTATTTTTGCTTCCAATT 58.409 32.000 0.00 0.00 0.00 2.32
3104 5021 8.662141 GCGTAAAGAACATAAGGAACTATCAAA 58.338 33.333 0.00 0.00 38.49 2.69
3218 5138 2.485124 CCCAAAGCAGTGGCATCAAAAA 60.485 45.455 0.00 0.00 44.61 1.94
3237 5157 2.543777 TGATGCGGAATAACTAGCCC 57.456 50.000 0.00 0.00 0.00 5.19
3333 5253 3.720949 TTTCCTCGGGATGTATGTACG 57.279 47.619 0.00 0.00 0.00 3.67
3334 5254 9.886132 AATAATATTTCCTCGGGATGTATGTAC 57.114 33.333 0.00 0.00 0.00 2.90
3410 5330 8.748412 TCCAACCTTCTATTGTCAAATAATTGG 58.252 33.333 0.00 0.00 37.15 3.16
3794 5715 7.085746 TGATATTCACATGACAAAAAGTGCTG 58.914 34.615 0.00 0.00 32.25 4.41
3938 5864 6.917217 TTTGCCTTAGTTTTCATGGTTTTG 57.083 33.333 0.00 0.00 0.00 2.44
3939 5865 7.278875 TGATTTGCCTTAGTTTTCATGGTTTT 58.721 30.769 0.00 0.00 0.00 2.43
3957 5883 8.715191 TTTCACCCATTTATAACATGATTTGC 57.285 30.769 0.00 0.00 0.00 3.68
4152 6078 8.680903 CAACTTTTTATGAGGCTGAATATGAGT 58.319 33.333 0.00 0.00 0.00 3.41
4194 6120 0.837272 TTCCCACCACTAGGCTATGC 59.163 55.000 0.00 0.00 39.06 3.14
4195 6121 1.417890 CCTTCCCACCACTAGGCTATG 59.582 57.143 0.00 0.00 39.06 2.23
4196 6122 1.695989 CCCTTCCCACCACTAGGCTAT 60.696 57.143 0.00 0.00 39.06 2.97
4197 6123 0.326238 CCCTTCCCACCACTAGGCTA 60.326 60.000 0.00 0.00 39.06 3.93
4198 6124 1.616628 CCCTTCCCACCACTAGGCT 60.617 63.158 0.00 0.00 39.06 4.58
4199 6125 2.680370 CCCCTTCCCACCACTAGGC 61.680 68.421 0.00 0.00 39.06 3.93
4200 6126 2.680370 GCCCCTTCCCACCACTAGG 61.680 68.421 0.00 0.00 42.21 3.02
4201 6127 1.616628 AGCCCCTTCCCACCACTAG 60.617 63.158 0.00 0.00 0.00 2.57
4202 6128 1.923395 CAGCCCCTTCCCACCACTA 60.923 63.158 0.00 0.00 0.00 2.74
4203 6129 3.260100 CAGCCCCTTCCCACCACT 61.260 66.667 0.00 0.00 0.00 4.00
4204 6130 2.616458 ATCAGCCCCTTCCCACCAC 61.616 63.158 0.00 0.00 0.00 4.16
4205 6131 2.204291 ATCAGCCCCTTCCCACCA 60.204 61.111 0.00 0.00 0.00 4.17
4206 6132 2.276740 CATCAGCCCCTTCCCACC 59.723 66.667 0.00 0.00 0.00 4.61
4207 6133 2.440980 GCATCAGCCCCTTCCCAC 60.441 66.667 0.00 0.00 33.58 4.61
4217 6143 2.440980 GGGTGGGAAGGCATCAGC 60.441 66.667 0.00 0.00 41.10 4.26
4218 6144 1.379044 GTGGGTGGGAAGGCATCAG 60.379 63.158 0.00 0.00 0.00 2.90
4219 6145 2.763215 GTGGGTGGGAAGGCATCA 59.237 61.111 0.00 0.00 0.00 3.07
4220 6146 2.043953 GGTGGGTGGGAAGGCATC 60.044 66.667 0.00 0.00 0.00 3.91
4221 6147 3.672503 GGGTGGGTGGGAAGGCAT 61.673 66.667 0.00 0.00 0.00 4.40
4223 6149 4.366684 CTGGGTGGGTGGGAAGGC 62.367 72.222 0.00 0.00 0.00 4.35
4224 6150 3.661648 CCTGGGTGGGTGGGAAGG 61.662 72.222 0.00 0.00 0.00 3.46
4225 6151 2.426305 GAACCTGGGTGGGTGGGAAG 62.426 65.000 0.00 0.00 39.85 3.46
4226 6152 2.370403 AACCTGGGTGGGTGGGAA 60.370 61.111 0.00 0.00 39.85 3.97
4227 6153 2.856988 GAACCTGGGTGGGTGGGA 60.857 66.667 0.00 0.00 39.85 4.37
4228 6154 2.713531 CTTGAACCTGGGTGGGTGGG 62.714 65.000 0.00 0.00 39.85 4.61
4229 6155 1.228552 CTTGAACCTGGGTGGGTGG 60.229 63.158 0.00 0.00 39.85 4.61
4230 6156 1.228552 CCTTGAACCTGGGTGGGTG 60.229 63.158 0.00 0.00 39.85 4.61
4231 6157 3.146828 GCCTTGAACCTGGGTGGGT 62.147 63.158 0.00 0.00 42.05 4.51
4232 6158 2.283173 GCCTTGAACCTGGGTGGG 60.283 66.667 0.00 0.00 41.11 4.61
4233 6159 1.903404 GTGCCTTGAACCTGGGTGG 60.903 63.158 0.00 0.00 42.93 4.61
4234 6160 1.152777 TGTGCCTTGAACCTGGGTG 60.153 57.895 0.00 0.00 0.00 4.61
4235 6161 1.151450 CTGTGCCTTGAACCTGGGT 59.849 57.895 0.00 0.00 0.00 4.51
4236 6162 0.400213 TACTGTGCCTTGAACCTGGG 59.600 55.000 0.00 0.00 0.00 4.45
4237 6163 1.072331 AGTACTGTGCCTTGAACCTGG 59.928 52.381 0.00 0.00 0.00 4.45
4238 6164 2.549754 CAAGTACTGTGCCTTGAACCTG 59.450 50.000 13.59 0.00 40.36 4.00
4239 6165 2.851195 CAAGTACTGTGCCTTGAACCT 58.149 47.619 13.59 0.00 40.36 3.50
4240 6166 1.266989 GCAAGTACTGTGCCTTGAACC 59.733 52.381 19.75 5.03 40.36 3.62
4241 6167 1.946768 TGCAAGTACTGTGCCTTGAAC 59.053 47.619 19.75 8.49 41.49 3.18
4242 6168 2.340210 TGCAAGTACTGTGCCTTGAA 57.660 45.000 19.75 10.87 41.49 2.69
4243 6169 2.340210 TTGCAAGTACTGTGCCTTGA 57.660 45.000 19.75 5.93 41.49 3.02
4244 6170 3.648339 AATTGCAAGTACTGTGCCTTG 57.352 42.857 20.20 14.19 41.49 3.61
4245 6171 3.799917 GCAAATTGCAAGTACTGTGCCTT 60.800 43.478 13.73 13.81 44.26 4.35
4246 6172 2.288395 GCAAATTGCAAGTACTGTGCCT 60.288 45.455 13.73 10.11 44.26 4.75
4247 6173 2.061028 GCAAATTGCAAGTACTGTGCC 58.939 47.619 13.73 8.81 44.26 5.01
4248 6174 1.715519 CGCAAATTGCAAGTACTGTGC 59.284 47.619 18.65 17.75 45.36 4.57
4249 6175 2.998772 ACGCAAATTGCAAGTACTGTG 58.001 42.857 18.65 7.91 45.36 3.66
4250 6176 3.708563 AACGCAAATTGCAAGTACTGT 57.291 38.095 18.65 2.73 45.36 3.55
4251 6177 3.796178 ACAAACGCAAATTGCAAGTACTG 59.204 39.130 18.65 11.25 45.36 2.74
4252 6178 4.040445 ACAAACGCAAATTGCAAGTACT 57.960 36.364 18.65 0.00 45.36 2.73
4253 6179 4.504385 CAACAAACGCAAATTGCAAGTAC 58.496 39.130 18.65 0.00 45.36 2.73
4254 6180 3.000724 GCAACAAACGCAAATTGCAAGTA 59.999 39.130 18.65 0.00 45.36 2.24
4255 6181 2.222999 GCAACAAACGCAAATTGCAAGT 60.223 40.909 18.65 5.73 45.36 3.16
4256 6182 2.365037 GCAACAAACGCAAATTGCAAG 58.635 42.857 18.65 5.05 45.36 4.01
4257 6183 2.448726 GCAACAAACGCAAATTGCAA 57.551 40.000 18.65 0.00 45.36 4.08
4259 6185 1.594276 GGTGCAACAAACGCAAATTGC 60.594 47.619 8.09 8.09 46.08 3.56
4260 6186 1.662629 TGGTGCAACAAACGCAAATTG 59.337 42.857 0.00 0.00 41.97 2.32
4261 6187 2.015736 TGGTGCAACAAACGCAAATT 57.984 40.000 0.00 0.00 41.97 1.82
4262 6188 2.015736 TTGGTGCAACAAACGCAAAT 57.984 40.000 16.46 0.00 41.97 2.32
4263 6189 2.015736 ATTGGTGCAACAAACGCAAA 57.984 40.000 23.14 0.00 41.97 3.68
4264 6190 2.015736 AATTGGTGCAACAAACGCAA 57.984 40.000 23.14 0.00 41.97 4.85
4265 6191 2.871182 TAATTGGTGCAACAAACGCA 57.129 40.000 23.14 3.87 39.98 5.24
4266 6192 4.323336 CAGTATAATTGGTGCAACAAACGC 59.677 41.667 23.14 10.17 39.98 4.84
4267 6193 5.341993 CACAGTATAATTGGTGCAACAAACG 59.658 40.000 23.14 12.96 39.98 3.60
4268 6194 5.633182 CCACAGTATAATTGGTGCAACAAAC 59.367 40.000 23.14 15.04 39.98 2.93
4269 6195 5.279206 CCCACAGTATAATTGGTGCAACAAA 60.279 40.000 23.14 6.25 39.98 2.83
4270 6196 4.219507 CCCACAGTATAATTGGTGCAACAA 59.780 41.667 21.46 21.46 39.98 2.83
4271 6197 3.761218 CCCACAGTATAATTGGTGCAACA 59.239 43.478 0.00 0.00 39.98 3.33
4272 6198 3.130340 CCCCACAGTATAATTGGTGCAAC 59.870 47.826 0.00 0.00 0.00 4.17
4273 6199 3.360867 CCCCACAGTATAATTGGTGCAA 58.639 45.455 0.00 0.00 0.00 4.08
4274 6200 2.357673 CCCCCACAGTATAATTGGTGCA 60.358 50.000 0.00 0.00 0.00 4.57
4275 6201 2.306847 CCCCCACAGTATAATTGGTGC 58.693 52.381 0.00 0.00 0.00 5.01
4296 6222 5.934402 TGATAGGAAGACTGTAAGGGAAC 57.066 43.478 0.00 0.00 39.30 3.62
4297 6223 6.271391 TGTTTGATAGGAAGACTGTAAGGGAA 59.729 38.462 0.00 0.00 39.30 3.97
4298 6224 5.783360 TGTTTGATAGGAAGACTGTAAGGGA 59.217 40.000 0.00 0.00 39.30 4.20
4299 6225 6.049955 TGTTTGATAGGAAGACTGTAAGGG 57.950 41.667 0.00 0.00 39.30 3.95
4300 6226 7.979444 TTTGTTTGATAGGAAGACTGTAAGG 57.021 36.000 0.00 0.00 39.30 2.69
4329 6255 5.116882 AGGATAATAGTTGTCGGCTTCAAC 58.883 41.667 11.72 11.72 43.51 3.18
4330 6256 5.353394 AGGATAATAGTTGTCGGCTTCAA 57.647 39.130 0.00 0.00 0.00 2.69
4331 6257 6.266786 TGATAGGATAATAGTTGTCGGCTTCA 59.733 38.462 0.00 0.00 0.00 3.02
4332 6258 6.688578 TGATAGGATAATAGTTGTCGGCTTC 58.311 40.000 0.00 0.00 0.00 3.86
4333 6259 6.665992 TGATAGGATAATAGTTGTCGGCTT 57.334 37.500 0.00 0.00 0.00 4.35
4334 6260 6.859112 ATGATAGGATAATAGTTGTCGGCT 57.141 37.500 0.00 0.00 0.00 5.52
4335 6261 7.773149 AGTATGATAGGATAATAGTTGTCGGC 58.227 38.462 0.00 0.00 0.00 5.54
4339 6265 9.769677 TGCCTAGTATGATAGGATAATAGTTGT 57.230 33.333 8.79 0.00 44.50 3.32
4355 6281 6.321690 AGGAGTAACTAAGTGTGCCTAGTATG 59.678 42.308 0.00 0.00 0.00 2.39
4383 6309 2.114616 AGAAACACCCAATTGCCAACA 58.885 42.857 0.00 0.00 0.00 3.33
4406 6332 7.170998 CGATAGTCCAACCATAGTTTTGATACC 59.829 40.741 0.00 0.00 32.45 2.73
4489 6415 8.025445 TTTCTTAAGAATGATGAGAGCTTTTGC 58.975 33.333 18.37 0.00 38.71 3.68
4547 6473 6.232692 AGCTTTGCATGAAAATACACCATTT 58.767 32.000 0.00 0.00 38.54 2.32
4663 6589 2.306805 TGGAAGATGCAGTGGATCAACT 59.693 45.455 24.46 9.99 0.00 3.16
4730 6656 7.706179 TGCAAGAAAAAGGTTGTTGATTAAGAG 59.294 33.333 0.60 0.00 0.00 2.85
4734 6660 7.725251 AGATGCAAGAAAAAGGTTGTTGATTA 58.275 30.769 0.00 0.00 0.00 1.75
4747 6673 8.540388 AGGTACTAATCACTAGATGCAAGAAAA 58.460 33.333 0.00 0.00 36.02 2.29
5040 6970 6.526674 GTGAAGTGAAAAATACCTAAATGCCG 59.473 38.462 0.00 0.00 0.00 5.69
5071 7001 9.500785 TCATGTTAACAATTTAGTGTCATCTGA 57.499 29.630 13.23 3.64 0.00 3.27
5139 7070 7.435068 TCCATAGTAAAGCTTTGTGAAGTTC 57.565 36.000 22.02 0.00 35.25 3.01
5378 7311 7.937649 AGTACACCTGTTATCAAAAGGAAAAC 58.062 34.615 2.05 0.00 34.97 2.43
5382 7315 6.681729 AGAGTACACCTGTTATCAAAAGGA 57.318 37.500 2.05 0.00 34.97 3.36
5495 7428 6.061441 CCACATAGGCTAAATTATGTCCACA 58.939 40.000 0.00 0.00 38.18 4.17
5598 7533 9.883142 ATAAATTTTCTTGGAAGTGTTTGTTCA 57.117 25.926 0.00 0.00 0.00 3.18
5643 7578 9.998106 GTAGGAATGACATACCACACTATTTAT 57.002 33.333 0.00 0.00 30.69 1.40
5754 7701 4.312443 GGTTTCTATCCGTGTCAAGTGAA 58.688 43.478 0.00 0.00 0.00 3.18
5776 7723 7.256756 TGTTGCCAAGTTTTATCAAAAATGG 57.743 32.000 10.75 10.75 40.18 3.16
5814 7761 8.156994 ACTTCCTTTTAGCAACGTTTATTGTA 57.843 30.769 0.00 0.00 31.83 2.41
5823 7770 9.026074 TCAAAATTTAACTTCCTTTTAGCAACG 57.974 29.630 0.00 0.00 0.00 4.10
5942 7889 2.420022 CCTTCCCGCACTAACATTTCAG 59.580 50.000 0.00 0.00 0.00 3.02
5956 7903 4.502777 GGCCTACTAATTTAGTCCTTCCCG 60.503 50.000 12.26 0.00 40.14 5.14
6060 8011 8.755028 ACTGTTTGGTTTTGTAGTAAAATTCCT 58.245 29.630 0.00 0.00 0.00 3.36
6096 8047 9.849607 CAATAACGTGCTTACATAATAGTTCAG 57.150 33.333 0.00 0.00 0.00 3.02
6243 8197 3.207778 GTGTTAGGTGTGCCACAAACTA 58.792 45.455 0.00 2.60 35.86 2.24
6362 8316 3.407424 TCTCCGGCATGATTAATCCAG 57.593 47.619 12.90 6.45 0.00 3.86
6531 8495 2.961522 TTTGGCAAGTCGAAACGATC 57.038 45.000 0.00 0.00 38.42 3.69
6554 8518 2.515926 TGATCGCAAGGATGTCTAGC 57.484 50.000 0.00 0.00 34.82 3.42
6773 8805 9.577110 GATGAAATGCTCTGTTGATGAAATTTA 57.423 29.630 0.00 0.00 0.00 1.40
6818 8850 8.725148 CACAAACTTTTTGTCTATGAGCTAGAT 58.275 33.333 1.25 0.00 38.71 1.98
6820 8852 7.173218 TCCACAAACTTTTTGTCTATGAGCTAG 59.827 37.037 1.25 0.00 0.00 3.42
6861 8893 2.093288 ACATGTAGATGTGCCCAGAGTG 60.093 50.000 4.42 0.00 41.52 3.51
6953 8993 4.454678 TGCTGACATTTATCTCATGGACC 58.545 43.478 0.00 0.00 0.00 4.46
6964 9004 6.883756 TCATGGTTTATGACTGCTGACATTTA 59.116 34.615 13.04 1.30 40.82 1.40
7098 9145 8.650143 ATTAATCTGTTCAACAAAGGGTACAT 57.350 30.769 0.00 0.00 0.00 2.29
7282 9341 6.902341 TCTCTCTGTTGCATACATTGTTTTC 58.098 36.000 0.00 0.00 35.85 2.29
7354 9413 2.586079 CAGCGCCATCTACCCGTG 60.586 66.667 2.29 0.00 0.00 4.94
7788 9851 0.393537 CACTGCCCATTGGAGGAGTC 60.394 60.000 13.01 0.00 0.00 3.36
7914 9977 4.782195 GCGTGGCATTTTCTATCAGTAACG 60.782 45.833 0.00 0.00 0.00 3.18
7967 10030 2.242196 CAACCTCCAGGACCACCATAAT 59.758 50.000 0.00 0.00 38.94 1.28
8143 10222 5.300034 TCGATGGCTAGGTCGATTTAAGTAA 59.700 40.000 0.00 0.00 41.44 2.24
8387 10479 2.279741 TGATTCGTGGCATGTAAGAGC 58.720 47.619 6.60 0.00 0.00 4.09
8417 10509 1.003112 ATTTTACCGCCTCGCACCA 60.003 52.632 0.00 0.00 0.00 4.17
8452 10544 2.603075 TGCCTCCTTTTGCTACCATT 57.397 45.000 0.00 0.00 0.00 3.16
8484 10577 4.973168 ACAAACTCCAGAGATAGCAAACA 58.027 39.130 0.70 0.00 0.00 2.83
8539 10632 0.810648 TGGATCCAACGAGCATTTGC 59.189 50.000 13.46 0.00 42.49 3.68
8580 10673 8.644619 GTCAAGGAACTGAACAAACTTTTTAAC 58.355 33.333 0.00 0.00 40.86 2.01
8711 10805 7.444183 TGAATTCACAAAGAACGACCTATTTCT 59.556 33.333 3.38 0.00 39.49 2.52
8713 10807 7.504924 TGAATTCACAAAGAACGACCTATTT 57.495 32.000 3.38 0.00 39.49 1.40
8714 10808 7.012894 TGTTGAATTCACAAAGAACGACCTATT 59.987 33.333 7.89 0.00 39.49 1.73
8725 10819 9.956720 AAGAGATTTAGTGTTGAATTCACAAAG 57.043 29.630 7.89 0.00 38.16 2.77
8855 10950 2.093553 ACAAACATGTGCCAACAGCTTT 60.094 40.909 0.00 0.00 44.23 3.51
8884 10979 8.046708 AGTAATAACTGAATTGGCATGTACTCA 58.953 33.333 0.00 0.00 33.57 3.41
8943 11038 2.130193 AGTGATACAGATGCCCATGGT 58.870 47.619 11.73 0.00 0.00 3.55
8945 11040 1.878088 GCAGTGATACAGATGCCCATG 59.122 52.381 0.00 0.00 32.49 3.66
8970 11065 6.296317 CCCTTTCTGCTATAGATGGTGATGAT 60.296 42.308 3.21 0.00 34.80 2.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.