Multiple sequence alignment - TraesCS7D01G418800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G418800 chr7D 100.000 5852 0 0 1 5852 538375227 538369376 0.000000e+00 10807.0
1 TraesCS7D01G418800 chr7D 81.614 223 29 8 113 324 120262695 120262916 2.170000e-39 174.0
2 TraesCS7D01G418800 chr7D 92.754 69 3 2 271 337 429482580 429482512 1.340000e-16 99.0
3 TraesCS7D01G418800 chr7D 97.727 44 1 0 1775 1818 457144799 457144756 6.290000e-10 76.8
4 TraesCS7D01G418800 chr7A 91.420 2098 143 16 3147 5223 619876632 619878713 0.000000e+00 2843.0
5 TraesCS7D01G418800 chr7A 91.945 1738 112 18 1 1721 619873232 619874958 0.000000e+00 2409.0
6 TraesCS7D01G418800 chr7A 80.605 794 104 24 2367 3145 619875741 619876499 8.510000e-158 568.0
7 TraesCS7D01G418800 chr7A 89.125 423 42 4 5229 5648 619879533 619879954 1.870000e-144 523.0
8 TraesCS7D01G418800 chr7A 84.066 364 34 8 1879 2240 619874993 619875334 4.370000e-86 329.0
9 TraesCS7D01G418800 chr7A 82.528 269 38 5 1 261 642251575 642251308 1.640000e-55 228.0
10 TraesCS7D01G418800 chr7A 80.952 168 19 8 5691 5847 619879947 619880112 2.860000e-23 121.0
11 TraesCS7D01G418800 chr7A 95.833 48 2 0 1772 1819 710686730 710686777 1.750000e-10 78.7
12 TraesCS7D01G418800 chr7A 97.727 44 1 0 1775 1818 608901773 608901816 6.290000e-10 76.8
13 TraesCS7D01G418800 chr7B 93.235 1907 88 19 3081 4977 580979158 580977283 0.000000e+00 2769.0
14 TraesCS7D01G418800 chr7B 92.143 1400 75 14 386 1779 580981321 580979951 0.000000e+00 1943.0
15 TraesCS7D01G418800 chr7B 85.987 314 42 2 5101 5413 581317763 581318075 9.400000e-88 335.0
16 TraesCS7D01G418800 chr7B 83.120 391 40 7 1 387 580981823 580981455 3.380000e-87 333.0
17 TraesCS7D01G418800 chr7B 88.672 256 15 7 1821 2072 580979965 580979720 3.430000e-77 300.0
18 TraesCS7D01G418800 chr7B 79.525 337 54 10 1 324 187537812 187538146 5.900000e-55 226.0
19 TraesCS7D01G418800 chr3D 83.742 326 45 8 5 324 2578263 2578586 9.530000e-78 302.0
20 TraesCS7D01G418800 chr3D 81.191 319 42 10 3 319 497828646 497828344 2.110000e-59 241.0
21 TraesCS7D01G418800 chrUn 81.651 327 46 8 11 325 29748417 29748741 5.820000e-65 259.0
22 TraesCS7D01G418800 chrUn 80.178 338 52 12 1 330 42510925 42510595 7.580000e-59 239.0
23 TraesCS7D01G418800 chr3B 81.287 342 45 13 1 326 452458871 452458533 5.820000e-65 259.0
24 TraesCS7D01G418800 chr2D 80.882 340 45 14 1 330 605567803 605568132 3.500000e-62 250.0
25 TraesCS7D01G418800 chr2D 79.856 139 26 2 5616 5753 373609482 373609619 3.730000e-17 100.0
26 TraesCS7D01G418800 chr2D 76.498 217 26 17 14 221 480537831 480538031 1.740000e-15 95.3
27 TraesCS7D01G418800 chr4D 80.308 325 54 5 2 324 94600529 94600845 2.730000e-58 237.0
28 TraesCS7D01G418800 chr5D 79.323 266 46 9 1 261 331325092 331325353 1.680000e-40 178.0
29 TraesCS7D01G418800 chr5A 79.116 249 43 7 1 245 626159798 626160041 4.690000e-36 163.0
30 TraesCS7D01G418800 chr5A 79.279 222 36 9 1 216 684656660 684656877 4.730000e-31 147.0
31 TraesCS7D01G418800 chr5A 95.238 42 2 0 1776 1817 568673601 568673642 3.780000e-07 67.6
32 TraesCS7D01G418800 chr5A 95.238 42 2 0 1776 1817 568686728 568686769 3.780000e-07 67.6
33 TraesCS7D01G418800 chr5B 96.429 56 2 0 271 326 407220240 407220295 6.240000e-15 93.5
34 TraesCS7D01G418800 chr1A 97.826 46 0 1 1777 1821 268930789 268930744 1.750000e-10 78.7
35 TraesCS7D01G418800 chr6D 100.000 39 0 0 1780 1818 57782421 57782383 8.130000e-09 73.1
36 TraesCS7D01G418800 chr3A 100.000 39 0 0 1780 1818 8568197 8568235 8.130000e-09 73.1
37 TraesCS7D01G418800 chr2A 78.448 116 18 5 5612 5721 346195457 346195571 1.050000e-07 69.4
38 TraesCS7D01G418800 chr1D 95.349 43 1 1 1780 1822 316312182 316312141 3.780000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G418800 chr7D 538369376 538375227 5851 True 10807.000000 10807 100.000000 1 5852 1 chr7D.!!$R3 5851
1 TraesCS7D01G418800 chr7A 619873232 619880112 6880 False 1132.166667 2843 86.352167 1 5847 6 chr7A.!!$F3 5846
2 TraesCS7D01G418800 chr7B 580977283 580981823 4540 True 1336.250000 2769 89.292500 1 4977 4 chr7B.!!$R1 4976

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
887 1035 1.067776 CATCGTCTCCTATAACGGCCC 60.068 57.143 0.0 0.00 39.31 5.80 F
2547 3179 0.232303 CGTGCAGTCCGAACACTTTC 59.768 55.000 0.0 0.00 32.07 2.62 F
2924 3566 0.405585 CCCACACAACCTTCCCTCAT 59.594 55.000 0.0 0.00 0.00 2.90 F
4166 5062 0.032815 GATAGAGAAGAGGGCCGCAC 59.967 60.000 10.7 3.07 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2685 3323 0.033011 AGAGGTGAGTCGGGCATACT 60.033 55.0 0.00 0.0 0.00 2.12 R
4123 5019 0.096628 AGTCTATGCGTGTCGTCGTC 59.903 55.0 0.00 0.0 0.00 4.20 R
4524 5429 0.739112 CGACTCCTTGGAGCTTGAGC 60.739 60.0 15.93 0.0 42.49 4.26 R
5003 5915 0.031010 AGGGTAGGCTCTACCAAGGG 60.031 60.0 24.24 0.0 43.14 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 1.275666 TGGTCGACCATTCCACTCAT 58.724 50.000 33.23 0.00 42.01 2.90
182 185 2.230130 TTTGCCCAGAATACCAAGGG 57.770 50.000 0.00 0.00 44.37 3.95
194 197 6.209391 CAGAATACCAAGGGTGTCATTTCTTT 59.791 38.462 0.00 0.00 36.19 2.52
220 224 7.031372 GTGAAACTTCATACACGAGTATACCA 58.969 38.462 5.15 0.00 38.88 3.25
298 308 3.202001 CATAAGGGGTGCGCGTGG 61.202 66.667 8.43 0.00 0.00 4.94
310 320 1.922135 GCGCGTGGAACCATGTTCAT 61.922 55.000 8.43 0.00 35.52 2.57
466 612 8.801882 AACATCAAATATTTTAGAACGGAGGA 57.198 30.769 0.00 0.00 0.00 3.71
528 674 6.727824 ATAGTTGTAGAATGAGTGTGTTGC 57.272 37.500 0.00 0.00 0.00 4.17
565 711 2.356022 CCATACCTCTTGTGCCATGACA 60.356 50.000 0.00 0.00 0.00 3.58
583 729 5.139435 TGACACATGAGTTTAGAGTCAGG 57.861 43.478 0.00 1.52 41.54 3.86
586 732 5.542779 ACACATGAGTTTAGAGTCAGGAAC 58.457 41.667 9.48 0.00 38.89 3.62
604 750 4.082136 AGGAACACGTAAAACAAAAGGCAA 60.082 37.500 0.00 0.00 0.00 4.52
657 805 1.589803 GTTGTGCCGTGACCTACTTT 58.410 50.000 0.00 0.00 0.00 2.66
658 806 1.263217 GTTGTGCCGTGACCTACTTTG 59.737 52.381 0.00 0.00 0.00 2.77
708 856 2.281070 CAAGCGCCAGTGACCAGT 60.281 61.111 2.29 0.00 0.00 4.00
826 974 2.173143 ACCAAAACCTCTACCGAAACCA 59.827 45.455 0.00 0.00 0.00 3.67
887 1035 1.067776 CATCGTCTCCTATAACGGCCC 60.068 57.143 0.00 0.00 39.31 5.80
897 1045 4.756642 TCCTATAACGGCCCGATATATACG 59.243 45.833 11.71 0.58 29.59 3.06
950 1098 2.202298 CCGCGACGCCATTGTTTC 60.202 61.111 15.34 0.00 0.00 2.78
952 1100 2.202298 GCGACGCCATTGTTTCGG 60.202 61.111 9.14 0.00 32.04 4.30
1014 1165 1.393539 CTCGCAATGTCGTCCGATTTT 59.606 47.619 0.00 0.00 0.00 1.82
1035 1189 1.111116 ACGAAGACCAGAACGTCCCA 61.111 55.000 0.00 0.00 33.80 4.37
1187 1342 2.343758 GCTGGACAGAGCCGACAA 59.656 61.111 3.00 0.00 32.35 3.18
1356 1511 1.258445 TGAGGAAGAAGGACCGGCTC 61.258 60.000 0.00 0.00 0.00 4.70
1401 1556 0.601057 TCGTCATCAACAAGCTCGGA 59.399 50.000 0.00 0.00 0.00 4.55
1488 1643 4.404098 ACCCCCGCTAACAAGCCG 62.404 66.667 0.00 0.00 0.00 5.52
1701 1856 3.876320 TCTACACGTTTGGTTTTGGTACC 59.124 43.478 4.43 4.43 38.73 3.34
1727 1882 4.180377 TCGATCCCAAGGTACTCTACAT 57.820 45.455 0.00 0.00 38.49 2.29
1728 1883 3.889538 TCGATCCCAAGGTACTCTACATG 59.110 47.826 0.00 0.00 38.49 3.21
1729 1884 3.553096 CGATCCCAAGGTACTCTACATGC 60.553 52.174 0.00 0.00 38.49 4.06
1774 1929 3.090765 GGGGGAGTGCTGGATTGT 58.909 61.111 0.00 0.00 0.00 2.71
1775 1930 1.384191 GGGGGAGTGCTGGATTGTT 59.616 57.895 0.00 0.00 0.00 2.83
1776 1931 0.681243 GGGGGAGTGCTGGATTGTTC 60.681 60.000 0.00 0.00 0.00 3.18
1777 1932 0.329596 GGGGAGTGCTGGATTGTTCT 59.670 55.000 0.00 0.00 0.00 3.01
1778 1933 1.457346 GGGAGTGCTGGATTGTTCTG 58.543 55.000 0.00 0.00 0.00 3.02
1779 1934 1.271597 GGGAGTGCTGGATTGTTCTGT 60.272 52.381 0.00 0.00 0.00 3.41
1780 1935 1.808945 GGAGTGCTGGATTGTTCTGTG 59.191 52.381 0.00 0.00 0.00 3.66
1781 1936 2.498167 GAGTGCTGGATTGTTCTGTGT 58.502 47.619 0.00 0.00 0.00 3.72
1782 1937 2.224606 AGTGCTGGATTGTTCTGTGTG 58.775 47.619 0.00 0.00 0.00 3.82
1783 1938 2.158769 AGTGCTGGATTGTTCTGTGTGA 60.159 45.455 0.00 0.00 0.00 3.58
1784 1939 2.618241 GTGCTGGATTGTTCTGTGTGAA 59.382 45.455 0.00 0.00 0.00 3.18
1785 1940 3.254166 GTGCTGGATTGTTCTGTGTGAAT 59.746 43.478 0.00 0.00 36.99 2.57
1786 1941 3.890756 TGCTGGATTGTTCTGTGTGAATT 59.109 39.130 0.00 0.00 36.99 2.17
1787 1942 4.341806 TGCTGGATTGTTCTGTGTGAATTT 59.658 37.500 0.00 0.00 36.99 1.82
1788 1943 5.163426 TGCTGGATTGTTCTGTGTGAATTTT 60.163 36.000 0.00 0.00 36.99 1.82
1789 1944 5.176223 GCTGGATTGTTCTGTGTGAATTTTG 59.824 40.000 0.00 0.00 36.99 2.44
1790 1945 6.462552 TGGATTGTTCTGTGTGAATTTTGA 57.537 33.333 0.00 0.00 36.99 2.69
1791 1946 6.871844 TGGATTGTTCTGTGTGAATTTTGAA 58.128 32.000 0.00 0.00 36.99 2.69
1792 1947 7.499292 TGGATTGTTCTGTGTGAATTTTGAAT 58.501 30.769 0.00 0.00 36.99 2.57
1793 1948 7.986320 TGGATTGTTCTGTGTGAATTTTGAATT 59.014 29.630 0.00 0.00 36.99 2.17
1794 1949 8.829612 GGATTGTTCTGTGTGAATTTTGAATTT 58.170 29.630 0.00 0.00 36.99 1.82
1795 1950 9.640974 GATTGTTCTGTGTGAATTTTGAATTTG 57.359 29.630 0.00 0.00 36.99 2.32
1796 1951 7.002816 TGTTCTGTGTGAATTTTGAATTTGC 57.997 32.000 0.00 0.00 36.99 3.68
1797 1952 6.817641 TGTTCTGTGTGAATTTTGAATTTGCT 59.182 30.769 0.00 0.00 36.99 3.91
1798 1953 7.978414 TGTTCTGTGTGAATTTTGAATTTGCTA 59.022 29.630 0.00 0.00 36.99 3.49
1799 1954 8.816144 GTTCTGTGTGAATTTTGAATTTGCTAA 58.184 29.630 0.00 0.00 36.99 3.09
1800 1955 8.351495 TCTGTGTGAATTTTGAATTTGCTAAC 57.649 30.769 0.00 0.00 0.00 2.34
1801 1956 7.437862 TCTGTGTGAATTTTGAATTTGCTAACC 59.562 33.333 0.00 0.00 0.00 2.85
1802 1957 7.044181 TGTGTGAATTTTGAATTTGCTAACCA 58.956 30.769 0.00 0.00 0.00 3.67
1803 1958 7.010923 TGTGTGAATTTTGAATTTGCTAACCAC 59.989 33.333 0.00 0.00 0.00 4.16
1804 1959 7.010923 GTGTGAATTTTGAATTTGCTAACCACA 59.989 33.333 0.00 0.00 0.00 4.17
1805 1960 7.714377 TGTGAATTTTGAATTTGCTAACCACAT 59.286 29.630 0.00 0.00 0.00 3.21
1806 1961 8.011106 GTGAATTTTGAATTTGCTAACCACATG 58.989 33.333 0.00 0.00 0.00 3.21
1807 1962 7.714377 TGAATTTTGAATTTGCTAACCACATGT 59.286 29.630 0.00 0.00 0.00 3.21
1808 1963 7.656707 ATTTTGAATTTGCTAACCACATGTC 57.343 32.000 0.00 0.00 0.00 3.06
1809 1964 4.782019 TGAATTTGCTAACCACATGTCC 57.218 40.909 0.00 0.00 0.00 4.02
1810 1965 3.509575 TGAATTTGCTAACCACATGTCCC 59.490 43.478 0.00 0.00 0.00 4.46
1811 1966 2.666272 TTTGCTAACCACATGTCCCA 57.334 45.000 0.00 0.00 0.00 4.37
1812 1967 2.198827 TTGCTAACCACATGTCCCAG 57.801 50.000 0.00 0.00 0.00 4.45
1813 1968 0.327924 TGCTAACCACATGTCCCAGG 59.672 55.000 0.00 0.00 0.00 4.45
1814 1969 0.328258 GCTAACCACATGTCCCAGGT 59.672 55.000 0.00 0.00 35.47 4.00
1815 1970 1.950484 GCTAACCACATGTCCCAGGTG 60.950 57.143 6.36 2.26 44.32 4.00
1819 1974 3.861341 CACATGTCCCAGGTGGTAG 57.139 57.895 0.00 0.00 41.58 3.18
1932 2092 6.590357 AGAATTTATCGTTCGTTGTGTTGAG 58.410 36.000 0.00 0.00 0.00 3.02
1940 2100 3.852471 TCGTTGTGTTGAGAATTCGTG 57.148 42.857 0.00 0.00 0.00 4.35
2031 2191 5.903530 CGAAACTAGGTAAAACAAAACGGTC 59.096 40.000 0.00 0.00 0.00 4.79
2032 2192 6.238184 CGAAACTAGGTAAAACAAAACGGTCT 60.238 38.462 0.00 0.00 0.00 3.85
2044 2204 0.384669 AACGGTCTATGCTAGTCGCC 59.615 55.000 0.00 0.00 38.05 5.54
2067 2228 5.125900 CCAAGAAATGTTATGACATGCTCCA 59.874 40.000 3.56 0.00 45.58 3.86
2077 2238 4.998671 TGACATGCTCCAAAACAAGAAA 57.001 36.364 0.00 0.00 0.00 2.52
2111 2272 8.331022 CCTCGAGAAAAATCATGTTATACACTG 58.669 37.037 15.71 0.00 0.00 3.66
2112 2273 8.196802 TCGAGAAAAATCATGTTATACACTGG 57.803 34.615 0.00 0.00 0.00 4.00
2113 2274 8.038351 TCGAGAAAAATCATGTTATACACTGGA 58.962 33.333 0.00 0.00 0.00 3.86
2212 2373 3.514309 ACTCCACCTGTCCATACTTACAC 59.486 47.826 0.00 0.00 0.00 2.90
2222 2383 4.401519 GTCCATACTTACACAGGCTACTCA 59.598 45.833 0.00 0.00 0.00 3.41
2223 2384 4.401519 TCCATACTTACACAGGCTACTCAC 59.598 45.833 0.00 0.00 0.00 3.51
2224 2385 4.352039 CATACTTACACAGGCTACTCACG 58.648 47.826 0.00 0.00 0.00 4.35
2225 2386 2.236766 ACTTACACAGGCTACTCACGT 58.763 47.619 0.00 0.00 0.00 4.49
2226 2387 2.626743 ACTTACACAGGCTACTCACGTT 59.373 45.455 0.00 0.00 0.00 3.99
2227 2388 3.069158 ACTTACACAGGCTACTCACGTTT 59.931 43.478 0.00 0.00 0.00 3.60
2228 2389 2.150397 ACACAGGCTACTCACGTTTC 57.850 50.000 0.00 0.00 0.00 2.78
2229 2390 1.411246 ACACAGGCTACTCACGTTTCA 59.589 47.619 0.00 0.00 0.00 2.69
2230 2391 2.037251 ACACAGGCTACTCACGTTTCAT 59.963 45.455 0.00 0.00 0.00 2.57
2231 2392 3.067106 CACAGGCTACTCACGTTTCATT 58.933 45.455 0.00 0.00 0.00 2.57
2232 2393 4.242475 CACAGGCTACTCACGTTTCATTA 58.758 43.478 0.00 0.00 0.00 1.90
2233 2394 4.327357 CACAGGCTACTCACGTTTCATTAG 59.673 45.833 0.00 0.00 0.00 1.73
2234 2395 4.021368 ACAGGCTACTCACGTTTCATTAGT 60.021 41.667 0.00 0.00 0.00 2.24
2235 2396 4.563184 CAGGCTACTCACGTTTCATTAGTC 59.437 45.833 0.00 0.00 0.00 2.59
2236 2397 3.864003 GGCTACTCACGTTTCATTAGTCC 59.136 47.826 0.00 0.00 0.00 3.85
2237 2398 3.864003 GCTACTCACGTTTCATTAGTCCC 59.136 47.826 0.00 0.00 0.00 4.46
2238 2399 4.381718 GCTACTCACGTTTCATTAGTCCCT 60.382 45.833 0.00 0.00 0.00 4.20
2239 2400 4.618920 ACTCACGTTTCATTAGTCCCTT 57.381 40.909 0.00 0.00 0.00 3.95
2240 2401 4.969484 ACTCACGTTTCATTAGTCCCTTT 58.031 39.130 0.00 0.00 0.00 3.11
2241 2402 5.374071 ACTCACGTTTCATTAGTCCCTTTT 58.626 37.500 0.00 0.00 0.00 2.27
2242 2403 5.826208 ACTCACGTTTCATTAGTCCCTTTTT 59.174 36.000 0.00 0.00 0.00 1.94
2272 2433 5.872070 CAGAGAGTTTCATTAGTCCCTTGAC 59.128 44.000 0.00 0.00 42.09 3.18
2281 2595 2.103079 AGTCCCTTGACCGGGTACCT 62.103 60.000 12.72 0.00 44.40 3.08
2296 2610 2.143925 GTACCTGAAGCTCGCTTTGTT 58.856 47.619 5.53 0.00 36.26 2.83
2313 2627 3.129852 TGTTGAAGCACTTGTTTCACG 57.870 42.857 7.90 0.00 43.27 4.35
2319 2633 3.338818 AGCACTTGTTTCACGTGATTG 57.661 42.857 20.80 10.61 36.00 2.67
2392 3023 9.866655 ACAAATCTATATTGTTGGGATGTACAT 57.133 29.630 8.43 8.43 37.74 2.29
2435 3066 7.777095 TGTGACAAATAGCTTAAGGTTTGTTT 58.223 30.769 20.14 13.30 42.80 2.83
2450 3081 7.951530 AGGTTTGTTTGTCAAAATGATGATC 57.048 32.000 0.00 0.00 45.84 2.92
2482 3113 4.236147 TCACAAAATACACATGCACATGC 58.764 39.130 10.50 0.00 42.39 4.06
2495 3126 2.368439 GCACATGCAAATAGGGACTCA 58.632 47.619 0.00 0.00 39.84 3.41
2496 3127 2.954318 GCACATGCAAATAGGGACTCAT 59.046 45.455 0.00 0.00 39.84 2.90
2507 3139 2.160721 GGGACTCATGGTACCTCAGA 57.839 55.000 14.36 7.35 45.48 3.27
2510 3142 2.428890 GGACTCATGGTACCTCAGAGTG 59.571 54.545 27.56 12.73 39.47 3.51
2519 3151 3.368531 GGTACCTCAGAGTGCCTGTAAAG 60.369 52.174 4.06 0.00 43.38 1.85
2547 3179 0.232303 CGTGCAGTCCGAACACTTTC 59.768 55.000 0.00 0.00 32.07 2.62
2549 3181 2.750948 GTGCAGTCCGAACACTTTCTA 58.249 47.619 0.00 0.00 0.00 2.10
2551 3183 3.368236 GTGCAGTCCGAACACTTTCTATC 59.632 47.826 0.00 0.00 0.00 2.08
2559 3191 4.935205 CCGAACACTTTCTATCATCCAACA 59.065 41.667 0.00 0.00 0.00 3.33
2561 3193 5.444613 CGAACACTTTCTATCATCCAACACG 60.445 44.000 0.00 0.00 0.00 4.49
2564 3196 4.330074 CACTTTCTATCATCCAACACGGTC 59.670 45.833 0.00 0.00 35.57 4.79
2565 3197 4.223032 ACTTTCTATCATCCAACACGGTCT 59.777 41.667 0.00 0.00 35.57 3.85
2566 3198 4.386867 TTCTATCATCCAACACGGTCTC 57.613 45.455 0.00 0.00 35.57 3.36
2567 3199 2.693591 TCTATCATCCAACACGGTCTCC 59.306 50.000 0.00 0.00 35.57 3.71
2568 3200 1.573108 ATCATCCAACACGGTCTCCT 58.427 50.000 0.00 0.00 35.57 3.69
2569 3201 2.225382 TCATCCAACACGGTCTCCTA 57.775 50.000 0.00 0.00 35.57 2.94
2570 3202 2.531771 TCATCCAACACGGTCTCCTAA 58.468 47.619 0.00 0.00 35.57 2.69
2571 3203 2.901192 TCATCCAACACGGTCTCCTAAA 59.099 45.455 0.00 0.00 35.57 1.85
2572 3204 2.825861 TCCAACACGGTCTCCTAAAC 57.174 50.000 0.00 0.00 35.57 2.01
2573 3205 1.000060 TCCAACACGGTCTCCTAAACG 60.000 52.381 0.00 0.00 35.57 3.60
2574 3206 1.269936 CCAACACGGTCTCCTAAACGT 60.270 52.381 0.00 0.00 40.60 3.99
2575 3207 2.056577 CAACACGGTCTCCTAAACGTC 58.943 52.381 0.00 0.00 37.48 4.34
2576 3208 0.600057 ACACGGTCTCCTAAACGTCC 59.400 55.000 0.00 0.00 37.48 4.79
2577 3209 0.455633 CACGGTCTCCTAAACGTCCG 60.456 60.000 6.52 6.52 42.94 4.79
2578 3210 0.890996 ACGGTCTCCTAAACGTCCGT 60.891 55.000 7.77 7.77 44.87 4.69
2579 3211 0.455633 CGGTCTCCTAAACGTCCGTG 60.456 60.000 0.00 0.00 34.38 4.94
2580 3212 0.600057 GGTCTCCTAAACGTCCGTGT 59.400 55.000 0.00 0.00 0.00 4.49
2581 3213 1.402062 GGTCTCCTAAACGTCCGTGTC 60.402 57.143 0.00 0.00 0.00 3.67
2582 3214 0.883833 TCTCCTAAACGTCCGTGTCC 59.116 55.000 0.00 0.00 0.00 4.02
2583 3215 0.599558 CTCCTAAACGTCCGTGTCCA 59.400 55.000 0.00 0.00 0.00 4.02
2584 3216 0.599558 TCCTAAACGTCCGTGTCCAG 59.400 55.000 0.00 0.00 0.00 3.86
2595 3227 1.577328 CGTGTCCAGTTGGCATGTCC 61.577 60.000 0.00 0.00 34.44 4.02
2603 3235 2.489329 CAGTTGGCATGTCCGATTTTCT 59.511 45.455 0.00 0.00 37.80 2.52
2610 3242 3.244976 CATGTCCGATTTTCTGCAAACC 58.755 45.455 0.00 0.00 0.00 3.27
2612 3244 1.533731 GTCCGATTTTCTGCAAACCGA 59.466 47.619 0.00 0.00 0.00 4.69
2624 3256 2.094494 TGCAAACCGAAAGCAAACTTGA 60.094 40.909 0.00 0.00 35.85 3.02
2627 3259 3.436700 AACCGAAAGCAAACTTGAAGG 57.563 42.857 0.00 0.00 35.85 3.46
2629 3261 2.618709 ACCGAAAGCAAACTTGAAGGAG 59.381 45.455 0.00 0.00 35.85 3.69
2642 3274 1.916697 GAAGGAGCTTTGCGGCAGTC 61.917 60.000 1.67 0.00 34.17 3.51
2653 3285 3.311110 GGCAGTCCGAGGACCACA 61.311 66.667 17.85 0.00 45.59 4.17
2670 3308 2.294979 CACATGTCCTCACATCCCATG 58.705 52.381 0.00 0.00 41.69 3.66
2688 3326 9.184523 CATCCCATGTGTTTTATCCTTTAAGTA 57.815 33.333 0.00 0.00 0.00 2.24
2689 3327 9.936329 ATCCCATGTGTTTTATCCTTTAAGTAT 57.064 29.630 0.00 0.00 0.00 2.12
2693 3331 7.399245 TGTGTTTTATCCTTTAAGTATGCCC 57.601 36.000 0.00 0.00 0.00 5.36
2697 3335 5.881923 TTATCCTTTAAGTATGCCCGACT 57.118 39.130 0.00 0.00 0.00 4.18
2712 3350 3.321111 GCCCGACTCACCTCTATTATTCA 59.679 47.826 0.00 0.00 0.00 2.57
2722 3360 9.775854 CTCACCTCTATTATTCAGATTTGATGT 57.224 33.333 0.00 0.00 32.27 3.06
2723 3361 9.770097 TCACCTCTATTATTCAGATTTGATGTC 57.230 33.333 0.00 0.00 32.27 3.06
2738 3376 9.347240 AGATTTGATGTCTATTTAAGGGACATG 57.653 33.333 18.17 0.00 46.48 3.21
2743 3381 8.493607 TGATGTCTATTTAAGGGACATGATTGA 58.506 33.333 18.17 0.00 46.48 2.57
2747 3385 8.571336 GTCTATTTAAGGGACATGATTGAATGG 58.429 37.037 0.00 0.40 31.46 3.16
2752 3390 2.954318 GGGACATGATTGAATGGTCAGG 59.046 50.000 0.00 0.00 34.49 3.86
2754 3392 4.889832 GACATGATTGAATGGTCAGGTC 57.110 45.455 0.00 4.71 45.12 3.85
2769 3407 1.300697 GGTCCCATATCGTGTCCGC 60.301 63.158 0.00 0.00 0.00 5.54
2770 3408 1.440060 GTCCCATATCGTGTCCGCA 59.560 57.895 0.00 0.00 0.00 5.69
2771 3409 0.597637 GTCCCATATCGTGTCCGCAG 60.598 60.000 0.00 0.00 0.00 5.18
2782 3420 2.596338 TCCGCAGACACGTCCAGA 60.596 61.111 0.00 0.00 0.00 3.86
2783 3421 1.977009 TCCGCAGACACGTCCAGAT 60.977 57.895 0.00 0.00 0.00 2.90
2785 3423 1.080501 CGCAGACACGTCCAGATGT 60.081 57.895 0.00 0.00 0.00 3.06
2794 3432 0.439985 CGTCCAGATGTGTTTCGCAG 59.560 55.000 0.00 0.00 0.00 5.18
2797 3435 2.094894 GTCCAGATGTGTTTCGCAGATG 59.905 50.000 0.00 0.00 35.04 2.90
2798 3436 2.028203 TCCAGATGTGTTTCGCAGATGA 60.028 45.455 0.00 0.00 35.04 2.92
2800 3438 3.189080 CCAGATGTGTTTCGCAGATGAAA 59.811 43.478 0.00 0.00 35.04 2.69
2806 3444 3.725740 GTGTTTCGCAGATGAAAAGTGTG 59.274 43.478 0.00 0.00 39.40 3.82
2807 3445 2.686558 TTCGCAGATGAAAAGTGTGC 57.313 45.000 0.00 0.00 35.04 4.57
2808 3446 1.882912 TCGCAGATGAAAAGTGTGCT 58.117 45.000 0.00 0.00 34.07 4.40
2809 3447 2.221169 TCGCAGATGAAAAGTGTGCTT 58.779 42.857 0.00 0.00 34.07 3.91
2814 3453 4.567959 GCAGATGAAAAGTGTGCTTGTTTT 59.432 37.500 0.00 0.00 34.71 2.43
2816 3455 6.255453 GCAGATGAAAAGTGTGCTTGTTTTAA 59.745 34.615 0.00 0.00 34.71 1.52
2823 3462 5.629079 AGTGTGCTTGTTTTAAGGATAGC 57.371 39.130 0.00 0.00 0.00 2.97
2827 3466 5.701750 TGTGCTTGTTTTAAGGATAGCGTTA 59.298 36.000 0.00 0.00 0.00 3.18
2843 3482 2.596904 GTTAGAGATGCCCTAACGCA 57.403 50.000 0.00 0.00 44.35 5.24
2858 3497 8.646203 TGCCCTAACGCATATGGTACAAAATAG 61.646 40.741 4.56 0.00 36.04 1.73
2876 3515 8.220559 ACAAAATAGGTACATCTAATGCTGGAT 58.779 33.333 0.00 0.00 0.00 3.41
2911 3553 1.933853 GCATCTACGATTGTCCCACAC 59.066 52.381 0.00 0.00 0.00 3.82
2921 3563 0.991355 TGTCCCACACAACCTTCCCT 60.991 55.000 0.00 0.00 29.30 4.20
2924 3566 0.405585 CCCACACAACCTTCCCTCAT 59.594 55.000 0.00 0.00 0.00 2.90
2946 3588 1.004862 TGATCGACTCACCTGACCTCT 59.995 52.381 0.00 0.00 0.00 3.69
2947 3589 2.238898 TGATCGACTCACCTGACCTCTA 59.761 50.000 0.00 0.00 0.00 2.43
2948 3590 2.404923 TCGACTCACCTGACCTCTAG 57.595 55.000 0.00 0.00 0.00 2.43
2949 3591 1.907255 TCGACTCACCTGACCTCTAGA 59.093 52.381 0.00 0.00 0.00 2.43
2950 3592 2.011222 CGACTCACCTGACCTCTAGAC 58.989 57.143 0.00 0.00 0.00 2.59
2951 3593 2.355310 CGACTCACCTGACCTCTAGACT 60.355 54.545 0.00 0.00 0.00 3.24
2952 3594 3.118702 CGACTCACCTGACCTCTAGACTA 60.119 52.174 0.00 0.00 0.00 2.59
2953 3595 4.193865 GACTCACCTGACCTCTAGACTAC 58.806 52.174 0.00 0.00 0.00 2.73
2954 3596 3.847780 ACTCACCTGACCTCTAGACTACT 59.152 47.826 0.00 0.00 0.00 2.57
2955 3597 5.031495 ACTCACCTGACCTCTAGACTACTA 58.969 45.833 0.00 0.00 0.00 1.82
2956 3598 5.104817 ACTCACCTGACCTCTAGACTACTAC 60.105 48.000 0.00 0.00 0.00 2.73
2957 3599 5.031495 TCACCTGACCTCTAGACTACTACT 58.969 45.833 0.00 0.00 0.00 2.57
2958 3600 6.200852 TCACCTGACCTCTAGACTACTACTA 58.799 44.000 0.00 0.00 0.00 1.82
2959 3601 6.324512 TCACCTGACCTCTAGACTACTACTAG 59.675 46.154 0.00 0.00 38.76 2.57
2960 3602 5.603813 ACCTGACCTCTAGACTACTACTAGG 59.396 48.000 0.00 0.00 38.19 3.02
2961 3603 5.840149 CCTGACCTCTAGACTACTACTAGGA 59.160 48.000 0.00 0.00 38.19 2.94
2962 3604 6.239402 CCTGACCTCTAGACTACTACTAGGAC 60.239 50.000 0.00 0.00 38.19 3.85
2963 3605 6.442961 TGACCTCTAGACTACTACTAGGACT 58.557 44.000 0.00 0.00 38.19 3.85
2964 3606 6.902416 TGACCTCTAGACTACTACTAGGACTT 59.098 42.308 0.00 0.00 38.19 3.01
2965 3607 7.069826 TGACCTCTAGACTACTACTAGGACTTC 59.930 44.444 0.00 0.00 38.19 3.01
2972 3614 6.720288 AGACTACTACTAGGACTTCTGCAAAA 59.280 38.462 0.00 0.00 0.00 2.44
2979 3621 6.917217 CTAGGACTTCTGCAAAATTCCTAG 57.083 41.667 24.00 24.00 44.98 3.02
2991 3633 6.488344 TGCAAAATTCCTAGTGTACACATTCA 59.512 34.615 27.06 9.51 0.00 2.57
2994 3636 9.912634 CAAAATTCCTAGTGTACACATTCATTT 57.087 29.630 27.06 18.81 0.00 2.32
2996 3638 7.865706 ATTCCTAGTGTACACATTCATTTCC 57.134 36.000 27.06 0.00 0.00 3.13
2997 3639 6.620877 TCCTAGTGTACACATTCATTTCCT 57.379 37.500 27.06 5.60 0.00 3.36
2998 3640 7.016153 TCCTAGTGTACACATTCATTTCCTT 57.984 36.000 27.06 5.09 0.00 3.36
2999 3641 7.458397 TCCTAGTGTACACATTCATTTCCTTT 58.542 34.615 27.06 4.89 0.00 3.11
3000 3642 7.606456 TCCTAGTGTACACATTCATTTCCTTTC 59.394 37.037 27.06 0.00 0.00 2.62
3001 3643 7.607991 CCTAGTGTACACATTCATTTCCTTTCT 59.392 37.037 27.06 3.81 0.00 2.52
3002 3644 7.823745 AGTGTACACATTCATTTCCTTTCTT 57.176 32.000 27.06 0.00 0.00 2.52
3003 3645 8.237811 AGTGTACACATTCATTTCCTTTCTTT 57.762 30.769 27.06 0.00 0.00 2.52
3004 3646 8.352942 AGTGTACACATTCATTTCCTTTCTTTC 58.647 33.333 27.06 0.00 0.00 2.62
3074 3716 6.614694 TTACATGTACATACTCAACCCACT 57.385 37.500 8.32 0.00 0.00 4.00
3079 3721 1.829222 ACATACTCAACCCACTACCGG 59.171 52.381 0.00 0.00 0.00 5.28
3081 3723 2.897271 TACTCAACCCACTACCGGTA 57.103 50.000 14.95 14.95 31.69 4.02
3136 3883 7.299586 GTGCAAAATGATTTTTACATGCATGT 58.700 30.769 33.20 33.20 44.48 3.21
3179 4054 7.428183 GGTAATTAATTATTCCGTGCGCATATG 59.572 37.037 15.91 6.84 0.00 1.78
3515 4390 1.237285 AAGAACGCCACTGCCATCAC 61.237 55.000 0.00 0.00 0.00 3.06
3541 4416 4.463186 CCCAGTGCTCCTATAGGTACATAC 59.537 50.000 18.51 11.26 36.34 2.39
3542 4417 5.077564 CCAGTGCTCCTATAGGTACATACA 58.922 45.833 18.51 6.40 36.34 2.29
3660 4553 3.834799 CGTAGACTGCCGGTCCCC 61.835 72.222 1.90 0.00 45.54 4.81
3663 4556 0.757935 GTAGACTGCCGGTCCCCATA 60.758 60.000 1.90 0.00 45.54 2.74
3831 4724 2.047179 GTGGAGGCCAGGAACGAC 60.047 66.667 5.01 0.00 32.34 4.34
4023 4916 4.484258 AGGCTCTTCGAGACGCGC 62.484 66.667 5.73 0.00 43.57 6.86
4122 5018 2.405172 GACTCCAACTTCAACGAGGAC 58.595 52.381 0.00 0.00 0.00 3.85
4123 5019 1.269621 ACTCCAACTTCAACGAGGACG 60.270 52.381 0.00 0.00 45.75 4.79
4124 5020 1.000607 CTCCAACTTCAACGAGGACGA 60.001 52.381 0.00 0.00 42.66 4.20
4135 5031 4.380628 AGGACGACGACGACACGC 62.381 66.667 15.32 0.00 42.66 5.34
4149 5045 2.289274 CGACACGCATAGACTCAGAGAT 59.711 50.000 3.79 0.00 0.00 2.75
4161 5057 3.821033 GACTCAGAGATAGAGAAGAGGGC 59.179 52.174 3.79 0.00 36.91 5.19
4162 5058 3.157087 CTCAGAGATAGAGAAGAGGGCC 58.843 54.545 0.00 0.00 35.09 5.80
4163 5059 1.885887 CAGAGATAGAGAAGAGGGCCG 59.114 57.143 0.00 0.00 0.00 6.13
4164 5060 0.601057 GAGATAGAGAAGAGGGCCGC 59.399 60.000 0.00 0.00 0.00 6.53
4165 5061 0.105964 AGATAGAGAAGAGGGCCGCA 60.106 55.000 10.70 0.00 0.00 5.69
4166 5062 0.032815 GATAGAGAAGAGGGCCGCAC 59.967 60.000 10.70 3.07 0.00 5.34
4250 5146 3.998672 GGGGGACGACGACAAGCA 61.999 66.667 0.00 0.00 0.00 3.91
4251 5147 2.737376 GGGGACGACGACAAGCAC 60.737 66.667 0.00 0.00 0.00 4.40
4254 5150 3.764049 GACGACGACAAGCACCGC 61.764 66.667 0.00 0.00 0.00 5.68
4560 5465 0.173481 TCGACATGCTTCTCTTCCGG 59.827 55.000 0.00 0.00 0.00 5.14
4770 5675 0.531974 AGTTTTGGACGCGCTTCTCA 60.532 50.000 14.02 7.35 0.00 3.27
4855 5760 3.390521 CCAGGTGGCCGTAGCAGA 61.391 66.667 0.00 0.00 42.56 4.26
4863 5768 1.486310 TGGCCGTAGCAGATCAGATTT 59.514 47.619 0.00 0.00 42.56 2.17
4865 5770 3.133901 TGGCCGTAGCAGATCAGATTTTA 59.866 43.478 0.00 0.00 42.56 1.52
4869 5774 5.300752 CCGTAGCAGATCAGATTTTACCAT 58.699 41.667 0.00 0.00 0.00 3.55
4872 5777 3.562973 AGCAGATCAGATTTTACCATGCG 59.437 43.478 0.00 0.00 36.31 4.73
4874 5779 4.787563 GCAGATCAGATTTTACCATGCGTG 60.788 45.833 0.00 0.00 0.00 5.34
4901 5808 4.891277 GCATGAAGCAAAACACATGTAC 57.109 40.909 0.00 0.00 44.79 2.90
4905 5817 6.585702 GCATGAAGCAAAACACATGTACATAA 59.414 34.615 8.32 0.00 44.79 1.90
4911 5823 2.325583 ACACATGTACATAAGCCCCG 57.674 50.000 8.32 0.00 0.00 5.73
4932 5844 1.602311 CTGCAAGAGCCAACTCAGTT 58.398 50.000 0.00 0.00 46.09 3.16
4933 5845 2.771089 CTGCAAGAGCCAACTCAGTTA 58.229 47.619 0.00 0.00 46.09 2.24
4934 5846 3.141398 CTGCAAGAGCCAACTCAGTTAA 58.859 45.455 0.00 0.00 46.09 2.01
4935 5847 3.141398 TGCAAGAGCCAACTCAGTTAAG 58.859 45.455 0.00 0.00 46.09 1.85
4936 5848 3.142174 GCAAGAGCCAACTCAGTTAAGT 58.858 45.455 0.00 0.00 46.09 2.24
5007 5919 2.446802 GAGATCGCCCTCCCCCTT 60.447 66.667 0.00 0.00 0.00 3.95
5009 5921 3.878667 GATCGCCCTCCCCCTTGG 61.879 72.222 0.00 0.00 0.00 3.61
5010 5922 4.760220 ATCGCCCTCCCCCTTGGT 62.760 66.667 0.00 0.00 34.77 3.67
5011 5923 3.341469 ATCGCCCTCCCCCTTGGTA 62.341 63.158 0.00 0.00 34.77 3.25
5017 5929 1.003573 CTCCCCCTTGGTAGAGCCT 59.996 63.158 0.00 0.00 38.35 4.58
5026 5938 2.062971 TGGTAGAGCCTACCCTAACG 57.937 55.000 21.63 0.00 36.79 3.18
5037 5949 4.404098 CCTAACGCCGCCACCCTT 62.404 66.667 0.00 0.00 0.00 3.95
5043 5955 4.475135 GCCGCCACCCTTCTCCTC 62.475 72.222 0.00 0.00 0.00 3.71
5051 5963 0.103337 ACCCTTCTCCTCCCCCTTTT 60.103 55.000 0.00 0.00 0.00 2.27
5055 5967 2.269940 CTTCTCCTCCCCCTTTTCTCA 58.730 52.381 0.00 0.00 0.00 3.27
5057 5969 1.132527 TCTCCTCCCCCTTTTCTCACA 60.133 52.381 0.00 0.00 0.00 3.58
5058 5970 1.705186 CTCCTCCCCCTTTTCTCACAA 59.295 52.381 0.00 0.00 0.00 3.33
5059 5971 1.423921 TCCTCCCCCTTTTCTCACAAC 59.576 52.381 0.00 0.00 0.00 3.32
5060 5972 1.547901 CCTCCCCCTTTTCTCACAACC 60.548 57.143 0.00 0.00 0.00 3.77
5063 5975 1.524008 CCCCTTTTCTCACAACCGCC 61.524 60.000 0.00 0.00 0.00 6.13
5104 6018 0.456824 CTCGTGTGAGACACCGATGG 60.457 60.000 12.69 0.00 45.93 3.51
5116 6030 1.146930 CCGATGGAGGTGGTGATGG 59.853 63.158 0.00 0.00 0.00 3.51
5117 6031 1.146930 CGATGGAGGTGGTGATGGG 59.853 63.158 0.00 0.00 0.00 4.00
5123 6037 0.918983 GAGGTGGTGATGGGGATTCA 59.081 55.000 0.00 0.00 0.00 2.57
5130 6044 0.548031 TGATGGGGATTCAGTGGCTC 59.452 55.000 0.00 0.00 0.00 4.70
5136 6050 2.434884 ATTCAGTGGCTCCGTGCG 60.435 61.111 0.00 0.00 44.05 5.34
5142 6056 3.755628 TGGCTCCGTGCGTCCTAC 61.756 66.667 0.00 0.00 44.05 3.18
5160 6074 2.668550 GCCTGCCGTCGTTCCTTT 60.669 61.111 0.00 0.00 0.00 3.11
5165 6079 0.953471 TGCCGTCGTTCCTTTGATGG 60.953 55.000 0.00 0.00 42.93 3.51
5172 6086 1.373570 GTTCCTTTGATGGAGCTCCG 58.626 55.000 27.43 11.96 39.43 4.63
5185 6099 3.132139 CTCCGTCTCCGCCTCGAA 61.132 66.667 0.00 0.00 0.00 3.71
5213 6127 2.949106 CGCCATCGGATCATTGCC 59.051 61.111 0.00 0.00 0.00 4.52
5216 6130 1.239968 GCCATCGGATCATTGCCCTC 61.240 60.000 0.00 0.00 0.00 4.30
5223 6137 1.303309 GATCATTGCCCTCGTTCCTG 58.697 55.000 0.00 0.00 0.00 3.86
5224 6138 0.107017 ATCATTGCCCTCGTTCCTGG 60.107 55.000 0.00 0.00 0.00 4.45
5225 6139 1.750399 CATTGCCCTCGTTCCTGGG 60.750 63.158 0.00 0.00 46.00 4.45
5240 6968 0.179018 CTGGGCGAAAGGGGATAAGG 60.179 60.000 0.00 0.00 0.00 2.69
5242 6970 0.179026 GGGCGAAAGGGGATAAGGTC 60.179 60.000 0.00 0.00 0.00 3.85
5257 6985 1.221021 GGTCCCCTCTACTTTGGCG 59.779 63.158 0.00 0.00 0.00 5.69
5275 7003 1.282248 CGGCGGTATGGTATCTTGCG 61.282 60.000 0.00 0.00 0.00 4.85
5318 7046 2.440409 CTATCCTTTGCTGGTGCTTGT 58.560 47.619 0.00 0.00 40.48 3.16
5323 7051 2.620242 CTTTGCTGGTGCTTGTTGTTT 58.380 42.857 0.00 0.00 40.48 2.83
5324 7052 2.292103 TTGCTGGTGCTTGTTGTTTC 57.708 45.000 0.00 0.00 40.48 2.78
5333 7061 3.559655 GTGCTTGTTGTTTCCCATTTTCC 59.440 43.478 0.00 0.00 0.00 3.13
5334 7062 3.138304 GCTTGTTGTTTCCCATTTTCCC 58.862 45.455 0.00 0.00 0.00 3.97
5343 7071 2.645802 TCCCATTTTCCCCGTTATTCG 58.354 47.619 0.00 0.00 39.52 3.34
5349 7078 1.712401 TTCCCCGTTATTCGTGTTCG 58.288 50.000 0.00 0.00 37.94 3.95
5362 7091 1.741401 TGTTCGGCGCCTTCATCTG 60.741 57.895 26.68 6.92 0.00 2.90
5374 7103 4.429108 GCCTTCATCTGACAACTCTAGTC 58.571 47.826 0.00 0.00 36.55 2.59
5375 7104 4.679372 GCCTTCATCTGACAACTCTAGTCC 60.679 50.000 0.00 0.00 35.15 3.85
5379 7108 0.179161 CTGACAACTCTAGTCCGGCG 60.179 60.000 0.00 0.00 35.15 6.46
5386 7115 3.413846 ACTCTAGTCCGGCGATATGTA 57.586 47.619 9.30 0.00 0.00 2.29
5398 7127 3.435671 GGCGATATGTATTAGCCACAACC 59.564 47.826 12.53 0.00 46.48 3.77
5409 7138 4.012895 CACAACCGGCGACAGTGC 62.013 66.667 9.30 0.00 0.00 4.40
5410 7139 4.235762 ACAACCGGCGACAGTGCT 62.236 61.111 9.30 0.00 34.52 4.40
5411 7140 3.414700 CAACCGGCGACAGTGCTC 61.415 66.667 9.30 0.00 34.52 4.26
5436 7165 4.038763 TGTGGACGACTACTCATTCTTGTT 59.961 41.667 2.92 0.00 0.00 2.83
5451 7180 4.325028 TCTTGTTGGTTTGCTCGTACTA 57.675 40.909 0.00 0.00 0.00 1.82
5464 7193 3.771798 CTCGTACTACTTCTCCTTTGGC 58.228 50.000 0.00 0.00 0.00 4.52
5477 7206 1.075674 TTTGGCAACTTGGGCTCCA 60.076 52.632 0.00 0.00 37.61 3.86
5483 7212 1.551883 GCAACTTGGGCTCCATTGATT 59.448 47.619 10.15 0.00 31.53 2.57
5507 7236 3.456280 GGTTTTTGTGAAATGCTCTGCA 58.544 40.909 0.00 0.00 44.86 4.41
5545 7275 1.125093 TTCGCCCCAAAGTGAGAGGA 61.125 55.000 0.00 0.00 0.00 3.71
5586 7316 5.072736 TGGCAGAGATAGATCATGATTTGGT 59.927 40.000 10.14 0.00 0.00 3.67
5589 7319 6.171921 CAGAGATAGATCATGATTTGGTCCC 58.828 44.000 10.14 0.00 35.96 4.46
5591 7321 7.179872 CAGAGATAGATCATGATTTGGTCCCTA 59.820 40.741 10.14 5.16 35.96 3.53
5635 7365 1.676678 GCATCTACAGCCGGACTCCA 61.677 60.000 5.05 0.00 0.00 3.86
5636 7366 0.103208 CATCTACAGCCGGACTCCAC 59.897 60.000 5.05 0.00 0.00 4.02
5637 7367 0.324368 ATCTACAGCCGGACTCCACA 60.324 55.000 5.05 0.00 0.00 4.17
5640 7370 0.981183 TACAGCCGGACTCCACAAAT 59.019 50.000 5.05 0.00 0.00 2.32
5641 7371 0.110486 ACAGCCGGACTCCACAAATT 59.890 50.000 5.05 0.00 0.00 1.82
5642 7372 0.523072 CAGCCGGACTCCACAAATTG 59.477 55.000 5.05 0.00 0.00 2.32
5643 7373 0.400213 AGCCGGACTCCACAAATTGA 59.600 50.000 5.05 0.00 0.00 2.57
5644 7374 0.521735 GCCGGACTCCACAAATTGAC 59.478 55.000 5.05 0.00 0.00 3.18
5645 7375 1.165270 CCGGACTCCACAAATTGACC 58.835 55.000 0.00 0.00 0.00 4.02
5646 7376 1.165270 CGGACTCCACAAATTGACCC 58.835 55.000 0.00 0.00 0.00 4.46
5647 7377 1.544537 CGGACTCCACAAATTGACCCA 60.545 52.381 0.00 0.00 0.00 4.51
5648 7378 1.886542 GGACTCCACAAATTGACCCAC 59.113 52.381 0.00 0.00 0.00 4.61
5649 7379 2.489073 GGACTCCACAAATTGACCCACT 60.489 50.000 0.00 0.00 0.00 4.00
5650 7380 2.554032 GACTCCACAAATTGACCCACTG 59.446 50.000 0.00 0.00 0.00 3.66
5651 7381 2.174639 ACTCCACAAATTGACCCACTGA 59.825 45.455 0.00 0.00 0.00 3.41
5652 7382 3.221771 CTCCACAAATTGACCCACTGAA 58.778 45.455 0.00 0.00 0.00 3.02
5653 7383 2.955660 TCCACAAATTGACCCACTGAAC 59.044 45.455 0.00 0.00 0.00 3.18
5654 7384 2.287547 CCACAAATTGACCCACTGAACG 60.288 50.000 0.00 0.00 0.00 3.95
5655 7385 1.336755 ACAAATTGACCCACTGAACGC 59.663 47.619 0.00 0.00 0.00 4.84
5656 7386 1.336440 CAAATTGACCCACTGAACGCA 59.664 47.619 0.00 0.00 0.00 5.24
5658 7388 0.606401 ATTGACCCACTGAACGCAGG 60.606 55.000 0.00 0.00 46.60 4.85
5659 7389 1.691195 TTGACCCACTGAACGCAGGA 61.691 55.000 0.00 0.00 46.60 3.86
5660 7390 1.668151 GACCCACTGAACGCAGGAC 60.668 63.158 0.00 0.00 46.60 3.85
5661 7391 2.358737 CCCACTGAACGCAGGACC 60.359 66.667 0.00 0.00 46.60 4.46
5662 7392 2.425592 CCACTGAACGCAGGACCA 59.574 61.111 0.00 0.00 46.60 4.02
5663 7393 1.961277 CCACTGAACGCAGGACCAC 60.961 63.158 0.00 0.00 46.60 4.16
5664 7394 1.069765 CACTGAACGCAGGACCACT 59.930 57.895 0.00 0.00 46.60 4.00
5665 7395 0.317160 CACTGAACGCAGGACCACTA 59.683 55.000 0.00 0.00 46.60 2.74
5666 7396 1.045407 ACTGAACGCAGGACCACTAA 58.955 50.000 0.00 0.00 46.60 2.24
5667 7397 1.270147 ACTGAACGCAGGACCACTAAC 60.270 52.381 0.00 0.00 46.60 2.34
5668 7398 0.753867 TGAACGCAGGACCACTAACA 59.246 50.000 0.00 0.00 0.00 2.41
5669 7399 1.270094 TGAACGCAGGACCACTAACAG 60.270 52.381 0.00 0.00 0.00 3.16
5670 7400 0.034896 AACGCAGGACCACTAACAGG 59.965 55.000 0.00 0.00 0.00 4.00
5671 7401 0.830444 ACGCAGGACCACTAACAGGA 60.830 55.000 0.00 0.00 0.00 3.86
5672 7402 0.389948 CGCAGGACCACTAACAGGAC 60.390 60.000 0.00 0.00 0.00 3.85
5673 7403 0.685097 GCAGGACCACTAACAGGACA 59.315 55.000 0.00 0.00 0.00 4.02
5674 7404 1.338200 GCAGGACCACTAACAGGACAG 60.338 57.143 0.00 0.00 0.00 3.51
5675 7405 1.276421 CAGGACCACTAACAGGACAGG 59.724 57.143 0.00 0.00 0.00 4.00
5676 7406 1.149288 AGGACCACTAACAGGACAGGA 59.851 52.381 0.00 0.00 0.00 3.86
5677 7407 1.550976 GGACCACTAACAGGACAGGAG 59.449 57.143 0.00 0.00 0.00 3.69
5678 7408 2.526432 GACCACTAACAGGACAGGAGA 58.474 52.381 0.00 0.00 0.00 3.71
5679 7409 2.494073 GACCACTAACAGGACAGGAGAG 59.506 54.545 0.00 0.00 0.00 3.20
5680 7410 2.110188 ACCACTAACAGGACAGGAGAGA 59.890 50.000 0.00 0.00 0.00 3.10
5681 7411 2.757868 CCACTAACAGGACAGGAGAGAG 59.242 54.545 0.00 0.00 0.00 3.20
5682 7412 2.757868 CACTAACAGGACAGGAGAGAGG 59.242 54.545 0.00 0.00 0.00 3.69
5683 7413 2.291930 ACTAACAGGACAGGAGAGAGGG 60.292 54.545 0.00 0.00 0.00 4.30
5684 7414 0.787084 AACAGGACAGGAGAGAGGGA 59.213 55.000 0.00 0.00 0.00 4.20
5685 7415 0.787084 ACAGGACAGGAGAGAGGGAA 59.213 55.000 0.00 0.00 0.00 3.97
5686 7416 1.150135 ACAGGACAGGAGAGAGGGAAA 59.850 52.381 0.00 0.00 0.00 3.13
5687 7417 2.260822 CAGGACAGGAGAGAGGGAAAA 58.739 52.381 0.00 0.00 0.00 2.29
5688 7418 2.639839 CAGGACAGGAGAGAGGGAAAAA 59.360 50.000 0.00 0.00 0.00 1.94
5689 7419 2.909662 AGGACAGGAGAGAGGGAAAAAG 59.090 50.000 0.00 0.00 0.00 2.27
5699 7429 3.566351 AGAGGGAAAAAGTTGACCCAAG 58.434 45.455 12.68 0.00 44.25 3.61
5714 7444 4.083862 AAGCGGACCCCTCGAAGC 62.084 66.667 0.00 0.00 0.00 3.86
5721 7451 1.539124 ACCCCTCGAAGCCTCCTTT 60.539 57.895 0.00 0.00 0.00 3.11
5726 7456 1.492720 CTCGAAGCCTCCTTTATCGC 58.507 55.000 0.00 0.00 0.00 4.58
5728 7458 0.880718 CGAAGCCTCCTTTATCGCCC 60.881 60.000 0.00 0.00 0.00 6.13
5729 7459 0.180406 GAAGCCTCCTTTATCGCCCA 59.820 55.000 0.00 0.00 0.00 5.36
5758 7488 1.260544 GCATTCCTCATATTGCCCCC 58.739 55.000 0.00 0.00 0.00 5.40
5759 7489 1.538047 CATTCCTCATATTGCCCCCG 58.462 55.000 0.00 0.00 0.00 5.73
5760 7490 1.073763 CATTCCTCATATTGCCCCCGA 59.926 52.381 0.00 0.00 0.00 5.14
5761 7491 1.444933 TTCCTCATATTGCCCCCGAT 58.555 50.000 0.00 0.00 0.00 4.18
5762 7492 0.692476 TCCTCATATTGCCCCCGATG 59.308 55.000 0.00 0.00 0.00 3.84
5763 7493 0.401738 CCTCATATTGCCCCCGATGT 59.598 55.000 0.00 0.00 0.00 3.06
5764 7494 1.527034 CTCATATTGCCCCCGATGTG 58.473 55.000 0.00 0.00 0.00 3.21
5765 7495 0.110295 TCATATTGCCCCCGATGTGG 59.890 55.000 0.00 0.00 37.55 4.17
5789 7529 1.082117 GCAATACGTGGAGTGTCCGG 61.082 60.000 0.00 0.00 40.17 5.14
5790 7530 0.459585 CAATACGTGGAGTGTCCGGG 60.460 60.000 0.00 0.00 40.17 5.73
5799 7539 3.936203 GTGTCCGGGCAGTGGTCA 61.936 66.667 10.28 0.00 0.00 4.02
5801 7541 2.436646 GTCCGGGCAGTGGTCATG 60.437 66.667 0.00 0.00 0.00 3.07
5807 7547 3.490759 GCAGTGGTCATGCGTCCG 61.491 66.667 0.00 0.00 33.31 4.79
5808 7548 3.490759 CAGTGGTCATGCGTCCGC 61.491 66.667 4.42 4.42 42.35 5.54
5819 7559 1.956170 GCGTCCGCCACATAGGATG 60.956 63.158 0.00 0.00 44.29 3.51
5830 7571 1.559682 ACATAGGATGTGACCCACCAC 59.440 52.381 0.00 0.00 43.01 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.942850 CCAAGTTTGATACCCAAAATTTTAGAT 57.057 29.630 2.44 0.00 46.87 1.98
48 49 8.628280 TGTCAATAATTCATGAAACTTCACACA 58.372 29.630 13.09 7.61 40.49 3.72
165 168 0.331278 CACCCTTGGTATTCTGGGCA 59.669 55.000 0.00 0.00 43.25 5.36
166 169 0.331616 ACACCCTTGGTATTCTGGGC 59.668 55.000 0.00 0.00 43.25 5.36
169 172 5.256474 AGAAATGACACCCTTGGTATTCTG 58.744 41.667 0.00 0.00 32.11 3.02
170 173 5.520748 AGAAATGACACCCTTGGTATTCT 57.479 39.130 0.00 0.00 32.11 2.40
171 174 6.015434 ACAAAGAAATGACACCCTTGGTATTC 60.015 38.462 0.00 0.00 32.11 1.75
194 197 7.031372 GGTATACTCGTGTATGAAGTTTCACA 58.969 38.462 18.02 0.00 40.49 3.58
298 308 4.082787 ACACGGATTTGATGAACATGGTTC 60.083 41.667 0.00 2.25 0.00 3.62
310 320 8.262227 AGTATACTTTTATGGACACGGATTTGA 58.738 33.333 0.00 0.00 0.00 2.69
354 364 8.230486 CCGCCATCTACAATATCAAATTAGTTC 58.770 37.037 0.00 0.00 0.00 3.01
422 568 9.747898 TTGATGTTACAGGTTTGTCCTAATTAT 57.252 29.630 0.00 0.00 46.24 1.28
439 585 9.931210 CCTCCGTTCTAAAATATTTGATGTTAC 57.069 33.333 0.39 0.00 0.00 2.50
528 674 1.755179 ATGGGTCATTTCTGCTTCCG 58.245 50.000 0.00 0.00 0.00 4.30
565 711 5.542779 GTGTTCCTGACTCTAAACTCATGT 58.457 41.667 0.00 0.00 0.00 3.21
583 729 5.765072 TTTGCCTTTTGTTTTACGTGTTC 57.235 34.783 0.00 0.00 0.00 3.18
586 732 5.051106 CCTCATTTGCCTTTTGTTTTACGTG 60.051 40.000 0.00 0.00 0.00 4.49
604 750 4.021192 CACAATACCAAAAGGCACCTCATT 60.021 41.667 0.00 0.00 0.00 2.57
615 763 4.677378 CGCGAATTGAACACAATACCAAAA 59.323 37.500 0.00 0.00 34.38 2.44
657 805 4.764823 GTCCAAGGATTAATTGACCACACA 59.235 41.667 0.00 0.00 0.00 3.72
658 806 4.142687 CGTCCAAGGATTAATTGACCACAC 60.143 45.833 0.00 0.00 0.00 3.82
708 856 2.583024 TGGATTCATTCAGTGCCACA 57.417 45.000 0.00 0.00 0.00 4.17
826 974 2.254152 TGGAGTGGCAGGAGTATCTT 57.746 50.000 0.00 0.00 33.73 2.40
887 1035 5.661056 ATGATATGCCCCCGTATATATCG 57.339 43.478 0.00 0.00 36.02 2.92
897 1045 5.337788 TGGGTAATTTAATGATATGCCCCC 58.662 41.667 0.00 0.00 32.94 5.40
898 1046 6.016555 ACTGGGTAATTTAATGATATGCCCC 58.983 40.000 0.00 0.00 32.94 5.80
905 1053 6.826741 ACTTGCGTACTGGGTAATTTAATGAT 59.173 34.615 0.00 0.00 0.00 2.45
938 1086 2.396590 ATCTACCGAAACAATGGCGT 57.603 45.000 0.00 0.00 0.00 5.68
950 1098 6.128391 GCTCTCTACTCACAATCTATCTACCG 60.128 46.154 0.00 0.00 0.00 4.02
952 1100 7.659799 TCTGCTCTCTACTCACAATCTATCTAC 59.340 40.741 0.00 0.00 0.00 2.59
1140 1295 3.069016 GGCCTGCATCATCATTCATCAAA 59.931 43.478 0.00 0.00 0.00 2.69
1141 1296 2.626266 GGCCTGCATCATCATTCATCAA 59.374 45.455 0.00 0.00 0.00 2.57
1356 1511 2.464459 GGCGGTCTTCATCTTGCCG 61.464 63.158 0.00 0.00 44.60 5.69
1401 1556 3.003763 GAGAGGCGGTCCTTGGGT 61.004 66.667 0.00 0.00 44.46 4.51
1478 1633 0.729116 CATGAGGTGCGGCTTGTTAG 59.271 55.000 0.00 0.00 0.00 2.34
1488 1643 0.941463 CGACGATAGCCATGAGGTGC 60.941 60.000 0.00 0.00 42.67 5.01
1499 1654 2.353607 GCAGGCCGTCGACGATAG 60.354 66.667 37.65 22.43 43.02 2.08
1600 1755 1.664659 CAAGAGAAAGATGCTGGCGAG 59.335 52.381 0.00 0.00 0.00 5.03
1701 1856 1.749634 AGTACCTTGGGATCGAAGTCG 59.250 52.381 0.00 0.00 41.45 4.18
1727 1882 3.638160 AGAAAAAGAACAATCCAGCAGCA 59.362 39.130 0.00 0.00 0.00 4.41
1728 1883 4.248691 AGAAAAAGAACAATCCAGCAGC 57.751 40.909 0.00 0.00 0.00 5.25
1729 1884 7.543947 AAAAAGAAAAAGAACAATCCAGCAG 57.456 32.000 0.00 0.00 0.00 4.24
1757 1912 0.681243 GAACAATCCAGCACTCCCCC 60.681 60.000 0.00 0.00 0.00 5.40
1763 1918 2.221169 TCACACAGAACAATCCAGCAC 58.779 47.619 0.00 0.00 0.00 4.40
1764 1919 2.636647 TCACACAGAACAATCCAGCA 57.363 45.000 0.00 0.00 0.00 4.41
1765 1920 4.510038 AATTCACACAGAACAATCCAGC 57.490 40.909 0.00 0.00 39.49 4.85
1766 1921 6.506147 TCAAAATTCACACAGAACAATCCAG 58.494 36.000 0.00 0.00 39.49 3.86
1767 1922 6.462552 TCAAAATTCACACAGAACAATCCA 57.537 33.333 0.00 0.00 39.49 3.41
1768 1923 7.951530 ATTCAAAATTCACACAGAACAATCC 57.048 32.000 0.00 0.00 39.49 3.01
1769 1924 9.640974 CAAATTCAAAATTCACACAGAACAATC 57.359 29.630 0.00 0.00 39.49 2.67
1770 1925 8.124199 GCAAATTCAAAATTCACACAGAACAAT 58.876 29.630 0.00 0.00 39.49 2.71
1771 1926 7.333921 AGCAAATTCAAAATTCACACAGAACAA 59.666 29.630 0.00 0.00 39.49 2.83
1772 1927 6.817641 AGCAAATTCAAAATTCACACAGAACA 59.182 30.769 0.00 0.00 39.49 3.18
1773 1928 7.237920 AGCAAATTCAAAATTCACACAGAAC 57.762 32.000 0.00 0.00 39.49 3.01
1774 1929 8.816144 GTTAGCAAATTCAAAATTCACACAGAA 58.184 29.630 0.00 0.00 41.28 3.02
1775 1930 7.437862 GGTTAGCAAATTCAAAATTCACACAGA 59.562 33.333 0.00 0.00 0.00 3.41
1776 1931 7.224362 TGGTTAGCAAATTCAAAATTCACACAG 59.776 33.333 0.00 0.00 0.00 3.66
1777 1932 7.010923 GTGGTTAGCAAATTCAAAATTCACACA 59.989 33.333 0.00 0.00 0.00 3.72
1778 1933 7.010923 TGTGGTTAGCAAATTCAAAATTCACAC 59.989 33.333 0.00 0.00 0.00 3.82
1779 1934 7.044181 TGTGGTTAGCAAATTCAAAATTCACA 58.956 30.769 0.00 0.00 0.00 3.58
1780 1935 7.475771 TGTGGTTAGCAAATTCAAAATTCAC 57.524 32.000 0.00 0.00 0.00 3.18
1781 1936 7.714377 ACATGTGGTTAGCAAATTCAAAATTCA 59.286 29.630 0.00 0.00 0.00 2.57
1782 1937 8.086851 ACATGTGGTTAGCAAATTCAAAATTC 57.913 30.769 0.00 0.00 0.00 2.17
1783 1938 7.173047 GGACATGTGGTTAGCAAATTCAAAATT 59.827 33.333 1.15 0.00 0.00 1.82
1784 1939 6.650390 GGACATGTGGTTAGCAAATTCAAAAT 59.350 34.615 1.15 0.00 0.00 1.82
1785 1940 5.988561 GGACATGTGGTTAGCAAATTCAAAA 59.011 36.000 1.15 0.00 0.00 2.44
1786 1941 5.510520 GGGACATGTGGTTAGCAAATTCAAA 60.511 40.000 1.15 0.00 0.00 2.69
1787 1942 4.021544 GGGACATGTGGTTAGCAAATTCAA 60.022 41.667 1.15 0.00 0.00 2.69
1788 1943 3.509575 GGGACATGTGGTTAGCAAATTCA 59.490 43.478 1.15 0.00 0.00 2.57
1789 1944 3.509575 TGGGACATGTGGTTAGCAAATTC 59.490 43.478 1.15 0.00 0.00 2.17
1790 1945 3.505386 TGGGACATGTGGTTAGCAAATT 58.495 40.909 1.15 0.00 0.00 1.82
1791 1946 3.091545 CTGGGACATGTGGTTAGCAAAT 58.908 45.455 1.15 0.00 38.20 2.32
1792 1947 2.513753 CTGGGACATGTGGTTAGCAAA 58.486 47.619 1.15 0.00 38.20 3.68
1793 1948 1.271871 CCTGGGACATGTGGTTAGCAA 60.272 52.381 1.15 0.00 38.20 3.91
1794 1949 0.327924 CCTGGGACATGTGGTTAGCA 59.672 55.000 1.15 0.00 38.20 3.49
1795 1950 0.328258 ACCTGGGACATGTGGTTAGC 59.672 55.000 1.15 0.00 35.47 3.09
1802 1957 0.984230 CACTACCACCTGGGACATGT 59.016 55.000 0.00 0.00 37.79 3.21
1803 1958 0.392998 GCACTACCACCTGGGACATG 60.393 60.000 0.00 0.00 41.15 3.21
1804 1959 0.547712 AGCACTACCACCTGGGACAT 60.548 55.000 0.00 0.00 41.15 3.06
1805 1960 1.152118 AGCACTACCACCTGGGACA 60.152 57.895 0.00 0.00 41.15 4.02
1806 1961 1.296715 CAGCACTACCACCTGGGAC 59.703 63.158 0.00 0.00 41.15 4.46
1807 1962 1.918293 CCAGCACTACCACCTGGGA 60.918 63.158 0.00 0.00 41.87 4.37
1808 1963 1.274703 ATCCAGCACTACCACCTGGG 61.275 60.000 0.00 0.00 44.87 4.45
1809 1964 0.620556 AATCCAGCACTACCACCTGG 59.379 55.000 0.00 0.00 45.88 4.45
1810 1965 1.003580 ACAATCCAGCACTACCACCTG 59.996 52.381 0.00 0.00 0.00 4.00
1811 1966 1.362224 ACAATCCAGCACTACCACCT 58.638 50.000 0.00 0.00 0.00 4.00
1812 1967 2.084546 GAACAATCCAGCACTACCACC 58.915 52.381 0.00 0.00 0.00 4.61
1813 1968 2.744202 CAGAACAATCCAGCACTACCAC 59.256 50.000 0.00 0.00 0.00 4.16
1814 1969 2.637382 TCAGAACAATCCAGCACTACCA 59.363 45.455 0.00 0.00 0.00 3.25
1815 1970 3.055819 TCTCAGAACAATCCAGCACTACC 60.056 47.826 0.00 0.00 0.00 3.18
1816 1971 4.193826 TCTCAGAACAATCCAGCACTAC 57.806 45.455 0.00 0.00 0.00 2.73
1817 1972 4.890158 TTCTCAGAACAATCCAGCACTA 57.110 40.909 0.00 0.00 0.00 2.74
1818 1973 3.777106 TTCTCAGAACAATCCAGCACT 57.223 42.857 0.00 0.00 0.00 4.40
1819 1974 4.217118 ACATTTCTCAGAACAATCCAGCAC 59.783 41.667 0.00 0.00 0.00 4.40
1892 2051 2.660670 TTCTTTACCCCGCCAAAAGA 57.339 45.000 0.00 0.00 37.44 2.52
1893 2052 3.953712 AATTCTTTACCCCGCCAAAAG 57.046 42.857 0.00 0.00 0.00 2.27
1932 2092 6.312918 TGAGTAAAGGTTCATAGCACGAATTC 59.687 38.462 0.00 0.00 0.00 2.17
1997 2157 8.130469 TGTTTTACCTAGTTTCGTGGAATTTTC 58.870 33.333 0.00 0.00 0.00 2.29
2044 2204 6.198650 TGGAGCATGTCATAACATTTCTTG 57.801 37.500 0.00 0.00 43.74 3.02
2086 2247 8.331022 CCAGTGTATAACATGATTTTTCTCGAG 58.669 37.037 5.93 5.93 0.00 4.04
2087 2248 8.038351 TCCAGTGTATAACATGATTTTTCTCGA 58.962 33.333 0.00 0.00 0.00 4.04
2088 2249 8.196802 TCCAGTGTATAACATGATTTTTCTCG 57.803 34.615 0.00 0.00 0.00 4.04
2089 2250 9.774742 GTTCCAGTGTATAACATGATTTTTCTC 57.225 33.333 0.00 0.00 0.00 2.87
2090 2251 9.295825 TGTTCCAGTGTATAACATGATTTTTCT 57.704 29.630 0.00 0.00 0.00 2.52
2091 2252 9.906660 TTGTTCCAGTGTATAACATGATTTTTC 57.093 29.630 0.00 0.00 33.44 2.29
2095 2256 8.862325 TTCTTGTTCCAGTGTATAACATGATT 57.138 30.769 0.00 0.00 37.23 2.57
2111 2272 8.405418 ACTTTTATAGAGGGTTTTCTTGTTCC 57.595 34.615 0.00 0.00 0.00 3.62
2142 2303 7.446319 CCATAGAGAAATGTGCCATGATTTCTA 59.554 37.037 16.08 6.40 44.99 2.10
2143 2304 6.264744 CCATAGAGAAATGTGCCATGATTTCT 59.735 38.462 16.06 16.06 46.72 2.52
2144 2305 6.040166 ACCATAGAGAAATGTGCCATGATTTC 59.960 38.462 8.75 8.75 38.38 2.17
2159 2320 4.263905 ACCATCTTTTGCCACCATAGAGAA 60.264 41.667 0.00 0.00 0.00 2.87
2198 2359 4.350245 AGTAGCCTGTGTAAGTATGGACA 58.650 43.478 0.00 0.00 0.00 4.02
2216 2377 5.326200 AGGGACTAATGAAACGTGAGTAG 57.674 43.478 0.00 0.00 40.83 2.57
2242 2403 6.016276 GGGACTAATGAAACTCTCTGCAAAAA 60.016 38.462 0.00 0.00 0.00 1.94
2243 2404 5.473504 GGGACTAATGAAACTCTCTGCAAAA 59.526 40.000 0.00 0.00 0.00 2.44
2244 2405 5.003804 GGGACTAATGAAACTCTCTGCAAA 58.996 41.667 0.00 0.00 0.00 3.68
2245 2406 4.287067 AGGGACTAATGAAACTCTCTGCAA 59.713 41.667 0.00 0.00 36.02 4.08
2246 2407 3.840666 AGGGACTAATGAAACTCTCTGCA 59.159 43.478 0.00 0.00 36.02 4.41
2247 2408 4.479786 AGGGACTAATGAAACTCTCTGC 57.520 45.455 0.00 0.00 36.02 4.26
2248 2409 5.872070 GTCAAGGGACTAATGAAACTCTCTG 59.128 44.000 0.00 0.00 38.49 3.35
2249 2410 5.046231 GGTCAAGGGACTAATGAAACTCTCT 60.046 44.000 0.00 0.00 43.77 3.10
2250 2411 5.179533 GGTCAAGGGACTAATGAAACTCTC 58.820 45.833 0.00 0.00 43.77 3.20
2251 2412 4.322801 CGGTCAAGGGACTAATGAAACTCT 60.323 45.833 0.00 0.00 43.77 3.24
2252 2413 3.933332 CGGTCAAGGGACTAATGAAACTC 59.067 47.826 0.00 0.00 43.77 3.01
2253 2414 3.307480 CCGGTCAAGGGACTAATGAAACT 60.307 47.826 0.00 0.00 43.77 2.66
2272 2433 2.494918 CGAGCTTCAGGTACCCGG 59.505 66.667 8.74 0.85 0.00 5.73
2296 2610 2.351455 TCACGTGAAACAAGTGCTTCA 58.649 42.857 17.62 0.00 42.00 3.02
2305 2619 5.106515 TGTCAAAGTTCAATCACGTGAAACA 60.107 36.000 24.13 5.94 39.18 2.83
2319 2633 6.205784 TCGGTGAAAATGATTGTCAAAGTTC 58.794 36.000 0.00 0.00 0.00 3.01
2482 3113 4.408921 TGAGGTACCATGAGTCCCTATTTG 59.591 45.833 15.94 0.00 0.00 2.32
2489 3120 2.428890 CACTCTGAGGTACCATGAGTCC 59.571 54.545 22.96 0.00 36.05 3.85
2490 3121 2.159170 GCACTCTGAGGTACCATGAGTC 60.159 54.545 22.96 16.60 36.05 3.36
2495 3126 1.198713 CAGGCACTCTGAGGTACCAT 58.801 55.000 15.94 0.00 46.18 3.55
2496 3127 0.178932 ACAGGCACTCTGAGGTACCA 60.179 55.000 15.94 0.00 46.18 3.25
2506 3138 3.004419 GGTTCAAACCTTTACAGGCACTC 59.996 47.826 4.63 0.00 45.56 3.51
2507 3139 2.956333 GGTTCAAACCTTTACAGGCACT 59.044 45.455 4.63 0.00 45.56 4.40
2510 3142 1.951602 ACGGTTCAAACCTTTACAGGC 59.048 47.619 10.07 0.00 45.56 4.85
2519 3151 1.652563 GGACTGCACGGTTCAAACC 59.347 57.895 1.61 1.61 45.76 3.27
2529 3161 1.583054 AGAAAGTGTTCGGACTGCAC 58.417 50.000 0.00 0.00 38.90 4.57
2530 3162 3.006430 TGATAGAAAGTGTTCGGACTGCA 59.994 43.478 0.00 0.00 38.90 4.41
2533 3165 4.466370 TGGATGATAGAAAGTGTTCGGACT 59.534 41.667 0.00 0.00 38.90 3.85
2547 3179 2.695666 AGGAGACCGTGTTGGATGATAG 59.304 50.000 0.00 0.00 42.00 2.08
2549 3181 1.573108 AGGAGACCGTGTTGGATGAT 58.427 50.000 0.00 0.00 42.00 2.45
2551 3183 3.000727 GTTTAGGAGACCGTGTTGGATG 58.999 50.000 0.00 0.00 42.00 3.51
2559 3191 0.890996 ACGGACGTTTAGGAGACCGT 60.891 55.000 7.77 7.77 46.69 4.83
2561 3193 0.600057 ACACGGACGTTTAGGAGACC 59.400 55.000 0.00 0.00 0.00 3.85
2564 3196 0.599558 TGGACACGGACGTTTAGGAG 59.400 55.000 0.00 0.00 0.00 3.69
2565 3197 0.599558 CTGGACACGGACGTTTAGGA 59.400 55.000 0.00 0.00 0.00 2.94
2566 3198 0.316204 ACTGGACACGGACGTTTAGG 59.684 55.000 0.00 0.00 0.00 2.69
2567 3199 1.790623 CAACTGGACACGGACGTTTAG 59.209 52.381 0.00 0.00 0.00 1.85
2568 3200 1.538634 CCAACTGGACACGGACGTTTA 60.539 52.381 0.00 0.00 37.39 2.01
2569 3201 0.812412 CCAACTGGACACGGACGTTT 60.812 55.000 0.00 0.00 37.39 3.60
2570 3202 1.227438 CCAACTGGACACGGACGTT 60.227 57.895 0.00 0.00 37.39 3.99
2571 3203 2.420043 CCAACTGGACACGGACGT 59.580 61.111 0.00 0.00 37.39 4.34
2572 3204 3.041940 GCCAACTGGACACGGACG 61.042 66.667 0.00 0.00 37.39 4.79
2573 3205 1.302511 ATGCCAACTGGACACGGAC 60.303 57.895 0.00 0.00 37.39 4.79
2574 3206 1.302431 CATGCCAACTGGACACGGA 60.302 57.895 0.00 0.00 37.39 4.69
2575 3207 1.577328 GACATGCCAACTGGACACGG 61.577 60.000 0.00 0.00 37.39 4.94
2576 3208 1.577328 GGACATGCCAACTGGACACG 61.577 60.000 0.00 0.00 37.39 4.49
2577 3209 1.577328 CGGACATGCCAACTGGACAC 61.577 60.000 0.00 0.00 37.39 3.67
2578 3210 1.302431 CGGACATGCCAACTGGACA 60.302 57.895 0.00 0.00 37.39 4.02
2579 3211 0.392998 ATCGGACATGCCAACTGGAC 60.393 55.000 0.00 0.00 37.39 4.02
2580 3212 0.327924 AATCGGACATGCCAACTGGA 59.672 50.000 0.00 0.00 37.39 3.86
2581 3213 1.176527 AAATCGGACATGCCAACTGG 58.823 50.000 0.00 0.00 35.94 4.00
2582 3214 2.489329 AGAAAATCGGACATGCCAACTG 59.511 45.455 0.00 0.00 35.94 3.16
2583 3215 2.489329 CAGAAAATCGGACATGCCAACT 59.511 45.455 0.00 0.00 35.94 3.16
2584 3216 2.867429 CAGAAAATCGGACATGCCAAC 58.133 47.619 0.00 0.00 35.94 3.77
2603 3235 2.094494 TCAAGTTTGCTTTCGGTTTGCA 60.094 40.909 0.00 0.00 31.49 4.08
2610 3242 2.291741 AGCTCCTTCAAGTTTGCTTTCG 59.708 45.455 0.00 0.00 31.49 3.46
2612 3244 4.743057 AAAGCTCCTTCAAGTTTGCTTT 57.257 36.364 12.76 12.76 43.17 3.51
2624 3256 1.968540 GACTGCCGCAAAGCTCCTT 60.969 57.895 0.00 0.00 0.00 3.36
2647 3279 1.407437 GGGATGTGAGGACATGTGGTC 60.407 57.143 1.15 0.00 43.22 4.02
2650 3282 2.294979 CATGGGATGTGAGGACATGTG 58.705 52.381 1.15 0.00 43.22 3.21
2652 3284 2.723322 ACATGGGATGTGAGGACATG 57.277 50.000 0.00 0.00 43.22 3.21
2664 3302 9.184523 CATACTTAAAGGATAAAACACATGGGA 57.815 33.333 0.00 0.00 0.00 4.37
2670 3308 6.316890 TCGGGCATACTTAAAGGATAAAACAC 59.683 38.462 0.00 0.00 0.00 3.32
2673 3311 6.655930 AGTCGGGCATACTTAAAGGATAAAA 58.344 36.000 0.00 0.00 0.00 1.52
2677 3315 3.709653 TGAGTCGGGCATACTTAAAGGAT 59.290 43.478 0.00 0.00 0.00 3.24
2685 3323 0.033011 AGAGGTGAGTCGGGCATACT 60.033 55.000 0.00 0.00 0.00 2.12
2688 3326 1.794714 AATAGAGGTGAGTCGGGCAT 58.205 50.000 0.00 0.00 0.00 4.40
2689 3327 2.447408 TAATAGAGGTGAGTCGGGCA 57.553 50.000 0.00 0.00 0.00 5.36
2693 3331 8.138074 TCAAATCTGAATAATAGAGGTGAGTCG 58.862 37.037 0.00 0.00 0.00 4.18
2697 3335 9.770097 GACATCAAATCTGAATAATAGAGGTGA 57.230 33.333 0.00 0.00 34.49 4.02
2712 3350 9.347240 CATGTCCCTTAAATAGACATCAAATCT 57.653 33.333 10.27 0.00 45.73 2.40
2722 3360 8.281531 ACCATTCAATCATGTCCCTTAAATAGA 58.718 33.333 0.00 0.00 0.00 1.98
2723 3361 8.469309 ACCATTCAATCATGTCCCTTAAATAG 57.531 34.615 0.00 0.00 0.00 1.73
2730 3368 3.372349 CCTGACCATTCAATCATGTCCCT 60.372 47.826 0.00 0.00 0.00 4.20
2732 3370 3.624777 ACCTGACCATTCAATCATGTCC 58.375 45.455 0.00 0.00 0.00 4.02
2737 3375 1.991813 TGGGACCTGACCATTCAATCA 59.008 47.619 0.00 0.00 31.83 2.57
2738 3376 2.806945 TGGGACCTGACCATTCAATC 57.193 50.000 0.00 0.00 31.83 2.67
2743 3381 2.104792 CACGATATGGGACCTGACCATT 59.895 50.000 1.91 0.00 46.25 3.16
2747 3385 1.068741 GGACACGATATGGGACCTGAC 59.931 57.143 0.00 0.00 0.00 3.51
2752 3390 0.597637 CTGCGGACACGATATGGGAC 60.598 60.000 0.00 0.00 44.60 4.46
2754 3392 0.597637 GTCTGCGGACACGATATGGG 60.598 60.000 21.02 0.00 44.60 4.00
2769 3407 2.154854 AACACATCTGGACGTGTCTG 57.845 50.000 2.99 0.00 45.37 3.51
2770 3408 2.755650 GAAACACATCTGGACGTGTCT 58.244 47.619 2.99 0.00 45.37 3.41
2771 3409 1.455786 CGAAACACATCTGGACGTGTC 59.544 52.381 2.99 0.00 45.37 3.67
2774 3412 0.249699 TGCGAAACACATCTGGACGT 60.250 50.000 0.00 0.00 0.00 4.34
2775 3413 0.439985 CTGCGAAACACATCTGGACG 59.560 55.000 0.00 0.00 0.00 4.79
2779 3417 4.408993 TTTCATCTGCGAAACACATCTG 57.591 40.909 0.00 0.00 30.00 2.90
2782 3420 4.036734 ACACTTTTCATCTGCGAAACACAT 59.963 37.500 0.00 0.00 34.68 3.21
2783 3421 3.376859 ACACTTTTCATCTGCGAAACACA 59.623 39.130 0.00 0.00 34.68 3.72
2785 3423 3.791789 GCACACTTTTCATCTGCGAAACA 60.792 43.478 0.00 0.00 34.68 2.83
2786 3424 2.721090 GCACACTTTTCATCTGCGAAAC 59.279 45.455 0.00 0.00 34.68 2.78
2787 3425 2.618241 AGCACACTTTTCATCTGCGAAA 59.382 40.909 0.00 0.00 33.12 3.46
2789 3427 1.882912 AGCACACTTTTCATCTGCGA 58.117 45.000 0.00 0.00 32.92 5.10
2794 3432 6.978080 TCCTTAAAACAAGCACACTTTTCATC 59.022 34.615 0.00 0.00 32.29 2.92
2797 3435 7.114953 GCTATCCTTAAAACAAGCACACTTTTC 59.885 37.037 0.00 0.00 32.29 2.29
2798 3436 6.923508 GCTATCCTTAAAACAAGCACACTTTT 59.076 34.615 0.00 0.00 32.29 2.27
2800 3438 5.334879 CGCTATCCTTAAAACAAGCACACTT 60.335 40.000 0.00 0.00 36.19 3.16
2806 3444 6.534079 TCTCTAACGCTATCCTTAAAACAAGC 59.466 38.462 0.00 0.00 0.00 4.01
2807 3445 8.543774 CATCTCTAACGCTATCCTTAAAACAAG 58.456 37.037 0.00 0.00 0.00 3.16
2808 3446 7.011109 GCATCTCTAACGCTATCCTTAAAACAA 59.989 37.037 0.00 0.00 0.00 2.83
2809 3447 6.479001 GCATCTCTAACGCTATCCTTAAAACA 59.521 38.462 0.00 0.00 0.00 2.83
2814 3453 3.510360 GGGCATCTCTAACGCTATCCTTA 59.490 47.826 0.00 0.00 0.00 2.69
2816 3455 1.896465 GGGCATCTCTAACGCTATCCT 59.104 52.381 0.00 0.00 0.00 3.24
2885 3527 3.741344 GGGACAATCGTAGATGCATGTAC 59.259 47.826 21.07 21.07 45.12 2.90
2891 3533 1.933853 GTGTGGGACAATCGTAGATGC 59.066 52.381 0.00 0.00 44.16 3.91
2897 3539 3.015516 GGTTGTGTGGGACAATCGT 57.984 52.632 0.00 0.00 46.34 3.73
2899 3541 1.886542 GGAAGGTTGTGTGGGACAATC 59.113 52.381 0.00 0.00 46.34 2.67
2911 3553 3.375299 GTCGATCAAATGAGGGAAGGTTG 59.625 47.826 0.00 0.00 0.00 3.77
2921 3563 3.368427 GGTCAGGTGAGTCGATCAAATGA 60.368 47.826 0.00 0.00 40.43 2.57
2924 3566 2.231478 GAGGTCAGGTGAGTCGATCAAA 59.769 50.000 0.00 0.00 40.43 2.69
2946 3588 6.556974 TGCAGAAGTCCTAGTAGTAGTCTA 57.443 41.667 3.91 0.00 0.00 2.59
2947 3589 5.438698 TGCAGAAGTCCTAGTAGTAGTCT 57.561 43.478 3.91 0.00 0.00 3.24
2948 3590 6.512342 TTTGCAGAAGTCCTAGTAGTAGTC 57.488 41.667 3.91 0.00 0.00 2.59
2949 3591 6.912951 TTTTGCAGAAGTCCTAGTAGTAGT 57.087 37.500 3.91 0.00 0.00 2.73
2950 3592 7.492994 GGAATTTTGCAGAAGTCCTAGTAGTAG 59.507 40.741 24.58 0.00 39.89 2.57
2951 3593 7.328737 GGAATTTTGCAGAAGTCCTAGTAGTA 58.671 38.462 24.58 0.00 39.89 1.82
2952 3594 6.174049 GGAATTTTGCAGAAGTCCTAGTAGT 58.826 40.000 24.58 0.00 39.89 2.73
2953 3595 6.670077 GGAATTTTGCAGAAGTCCTAGTAG 57.330 41.667 24.58 0.00 39.89 2.57
2959 3601 4.762251 ACACTAGGAATTTTGCAGAAGTCC 59.238 41.667 24.50 24.50 42.53 3.85
2960 3602 5.948992 ACACTAGGAATTTTGCAGAAGTC 57.051 39.130 8.77 8.77 0.00 3.01
2961 3603 6.204882 GTGTACACTAGGAATTTTGCAGAAGT 59.795 38.462 18.92 0.00 0.00 3.01
2962 3604 6.204688 TGTGTACACTAGGAATTTTGCAGAAG 59.795 38.462 25.60 0.00 0.00 2.85
2963 3605 6.058833 TGTGTACACTAGGAATTTTGCAGAA 58.941 36.000 25.60 0.00 0.00 3.02
2964 3606 5.616270 TGTGTACACTAGGAATTTTGCAGA 58.384 37.500 25.60 0.00 0.00 4.26
2965 3607 5.940192 TGTGTACACTAGGAATTTTGCAG 57.060 39.130 25.60 0.00 0.00 4.41
2972 3614 7.633789 AGGAAATGAATGTGTACACTAGGAAT 58.366 34.615 25.60 8.63 0.00 3.01
2979 3621 8.352942 AGAAAGAAAGGAAATGAATGTGTACAC 58.647 33.333 19.36 19.36 0.00 2.90
2991 3633 8.969260 ATGCAAAAAGAAGAAAGAAAGGAAAT 57.031 26.923 0.00 0.00 0.00 2.17
2994 3636 7.287696 ACCTATGCAAAAAGAAGAAAGAAAGGA 59.712 33.333 0.00 0.00 0.00 3.36
2996 3638 7.383300 CCACCTATGCAAAAAGAAGAAAGAAAG 59.617 37.037 0.00 0.00 0.00 2.62
2997 3639 7.209475 CCACCTATGCAAAAAGAAGAAAGAAA 58.791 34.615 0.00 0.00 0.00 2.52
2998 3640 6.738453 GCCACCTATGCAAAAAGAAGAAAGAA 60.738 38.462 0.00 0.00 0.00 2.52
2999 3641 5.278957 GCCACCTATGCAAAAAGAAGAAAGA 60.279 40.000 0.00 0.00 0.00 2.52
3000 3642 4.925646 GCCACCTATGCAAAAAGAAGAAAG 59.074 41.667 0.00 0.00 0.00 2.62
3001 3643 4.343526 TGCCACCTATGCAAAAAGAAGAAA 59.656 37.500 0.00 0.00 35.40 2.52
3002 3644 3.894427 TGCCACCTATGCAAAAAGAAGAA 59.106 39.130 0.00 0.00 35.40 2.52
3003 3645 3.495331 TGCCACCTATGCAAAAAGAAGA 58.505 40.909 0.00 0.00 35.40 2.87
3004 3646 3.940209 TGCCACCTATGCAAAAAGAAG 57.060 42.857 0.00 0.00 35.40 2.85
3074 3716 5.826737 TCAAGGTTTTGAACAAATACCGGTA 59.173 36.000 18.46 18.46 40.26 4.02
3127 3874 9.788960 CATAATACGAGTAGTATACATGCATGT 57.211 33.333 33.20 33.20 46.26 3.21
3185 4060 0.242825 CTCGTCCAGCACCTTCGTTA 59.757 55.000 0.00 0.00 0.00 3.18
3301 4176 1.521450 TTGAGGTCCTGGACGACGAC 61.521 60.000 19.98 6.35 33.30 4.34
3610 4503 2.043752 TCCCCGGATACTGCACGA 60.044 61.111 0.73 0.00 0.00 4.35
3619 4512 1.558294 GTAGAAAGGTTGTCCCCGGAT 59.442 52.381 0.73 0.00 0.00 4.18
3660 4553 3.505184 GTTGGGGTGCGGCGTATG 61.505 66.667 9.37 0.00 0.00 2.39
3831 4724 0.607217 TGGACTGCTCATGTGCAAGG 60.607 55.000 21.69 14.16 42.83 3.61
4122 5018 1.059838 TCTATGCGTGTCGTCGTCG 59.940 57.895 0.00 0.00 38.55 5.12
4123 5019 0.096628 AGTCTATGCGTGTCGTCGTC 59.903 55.000 0.00 0.00 0.00 4.20
4124 5020 0.096628 GAGTCTATGCGTGTCGTCGT 59.903 55.000 0.00 0.00 0.00 4.34
4135 5031 6.881065 CCCTCTTCTCTATCTCTGAGTCTATG 59.119 46.154 4.32 0.00 33.59 2.23
4149 5045 2.058595 GGTGCGGCCCTCTTCTCTA 61.059 63.158 0.00 0.00 0.00 2.43
4200 5096 1.625818 CAGGGCCTATTATTCCTCGCT 59.374 52.381 5.28 0.00 0.00 4.93
4524 5429 0.739112 CGACTCCTTGGAGCTTGAGC 60.739 60.000 15.93 0.00 42.49 4.26
4770 5675 0.818296 AGAAGAAGCGTAGACGGCAT 59.182 50.000 3.97 0.00 40.23 4.40
4855 5760 3.016031 TGCACGCATGGTAAAATCTGAT 58.984 40.909 0.00 0.00 0.00 2.90
4863 5768 1.578926 GCAAGTGCACGCATGGTAA 59.421 52.632 12.01 0.00 41.59 2.85
4932 5844 3.302365 AACGCGTGCTAGGTTAACTTA 57.698 42.857 14.98 0.97 0.00 2.24
4933 5845 2.159327 AACGCGTGCTAGGTTAACTT 57.841 45.000 14.98 0.00 0.00 2.66
4934 5846 3.302365 TTAACGCGTGCTAGGTTAACT 57.698 42.857 14.98 0.00 32.79 2.24
4935 5847 4.588805 ATTTAACGCGTGCTAGGTTAAC 57.411 40.909 14.98 0.00 36.26 2.01
4936 5848 5.167121 TGTATTTAACGCGTGCTAGGTTAA 58.833 37.500 14.98 2.28 35.12 2.01
4994 5906 3.995809 CTACCAAGGGGGAGGGCGA 62.996 68.421 0.00 0.00 42.00 5.54
5003 5915 0.031010 AGGGTAGGCTCTACCAAGGG 60.031 60.000 24.24 0.00 43.14 3.95
5005 5917 2.361438 CGTTAGGGTAGGCTCTACCAAG 59.639 54.545 24.24 9.68 43.14 3.61
5007 5919 2.025863 GCGTTAGGGTAGGCTCTACCA 61.026 57.143 24.24 9.40 43.14 3.25
5009 5921 0.672889 GGCGTTAGGGTAGGCTCTAC 59.327 60.000 0.00 4.33 0.00 2.59
5010 5922 0.820891 CGGCGTTAGGGTAGGCTCTA 60.821 60.000 0.00 0.00 0.00 2.43
5011 5923 2.125961 CGGCGTTAGGGTAGGCTCT 61.126 63.158 0.00 0.00 0.00 4.09
5017 5929 3.773404 GGTGGCGGCGTTAGGGTA 61.773 66.667 9.37 0.00 0.00 3.69
5026 5938 4.475135 GAGGAGAAGGGTGGCGGC 62.475 72.222 0.00 0.00 0.00 6.53
5037 5949 1.132527 TGTGAGAAAAGGGGGAGGAGA 60.133 52.381 0.00 0.00 0.00 3.71
5043 5955 1.524008 GCGGTTGTGAGAAAAGGGGG 61.524 60.000 0.00 0.00 0.00 5.40
5081 5993 2.430921 GTGTCTCACACGAGCCGG 60.431 66.667 0.00 0.00 39.53 6.13
5089 6001 0.541998 ACCTCCATCGGTGTCTCACA 60.542 55.000 0.00 0.00 35.52 3.58
5099 6013 1.146930 CCCATCACCACCTCCATCG 59.853 63.158 0.00 0.00 0.00 3.84
5104 6018 0.918983 TGAATCCCCATCACCACCTC 59.081 55.000 0.00 0.00 0.00 3.85
5116 6030 1.450312 CACGGAGCCACTGAATCCC 60.450 63.158 0.00 0.00 0.00 3.85
5117 6031 2.109126 GCACGGAGCCACTGAATCC 61.109 63.158 0.00 0.00 37.23 3.01
5136 6050 4.849329 CGACGGCAGGCGTAGGAC 62.849 72.222 23.67 8.98 45.53 3.85
5144 6058 0.673644 ATCAAAGGAACGACGGCAGG 60.674 55.000 0.00 0.00 0.00 4.85
5172 6086 2.507324 GCAGTTCGAGGCGGAGAC 60.507 66.667 0.00 0.00 0.00 3.36
5198 6112 0.952497 CGAGGGCAATGATCCGATGG 60.952 60.000 0.00 0.00 0.00 3.51
5203 6117 0.181350 AGGAACGAGGGCAATGATCC 59.819 55.000 0.00 0.00 0.00 3.36
5208 6122 2.677228 CCCAGGAACGAGGGCAAT 59.323 61.111 0.00 0.00 41.23 3.56
5213 6127 1.741770 CTTTCGCCCAGGAACGAGG 60.742 63.158 4.91 0.40 39.81 4.63
5216 6130 2.746277 CCCTTTCGCCCAGGAACG 60.746 66.667 0.00 0.00 32.41 3.95
5223 6137 0.179026 GACCTTATCCCCTTTCGCCC 60.179 60.000 0.00 0.00 0.00 6.13
5224 6138 0.179026 GGACCTTATCCCCTTTCGCC 60.179 60.000 0.00 0.00 42.46 5.54
5225 6139 3.398694 GGACCTTATCCCCTTTCGC 57.601 57.895 0.00 0.00 42.46 4.70
5240 6968 1.221021 CCGCCAAAGTAGAGGGGAC 59.779 63.158 0.00 0.00 40.00 4.46
5242 6970 2.124695 GCCGCCAAAGTAGAGGGG 60.125 66.667 0.00 0.00 37.57 4.79
5245 6973 0.104304 ATACCGCCGCCAAAGTAGAG 59.896 55.000 0.00 0.00 0.00 2.43
5251 6979 0.533308 GATACCATACCGCCGCCAAA 60.533 55.000 0.00 0.00 0.00 3.28
5257 6985 0.949105 CCGCAAGATACCATACCGCC 60.949 60.000 0.00 0.00 43.02 6.13
5309 7037 1.786937 ATGGGAAACAACAAGCACCA 58.213 45.000 0.00 0.00 0.00 4.17
5318 7046 2.089600 ACGGGGAAAATGGGAAACAA 57.910 45.000 0.00 0.00 0.00 2.83
5323 7051 2.645802 CGAATAACGGGGAAAATGGGA 58.354 47.619 0.00 0.00 38.46 4.37
5343 7071 1.741770 AGATGAAGGCGCCGAACAC 60.742 57.895 23.20 14.02 0.00 3.32
5349 7078 0.674895 AGTTGTCAGATGAAGGCGCC 60.675 55.000 21.89 21.89 0.00 6.53
5362 7091 0.739561 ATCGCCGGACTAGAGTTGTC 59.260 55.000 5.05 0.00 0.00 3.18
5374 7103 2.268298 GTGGCTAATACATATCGCCGG 58.732 52.381 0.00 0.00 43.54 6.13
5375 7104 2.954316 TGTGGCTAATACATATCGCCG 58.046 47.619 0.00 0.00 43.54 6.46
5436 7165 3.057033 GGAGAAGTAGTACGAGCAAACCA 60.057 47.826 0.00 0.00 0.00 3.67
5451 7180 2.310538 CCAAGTTGCCAAAGGAGAAGT 58.689 47.619 0.00 0.00 0.00 3.01
5464 7193 3.592059 CAAATCAATGGAGCCCAAGTTG 58.408 45.455 0.00 0.00 36.95 3.16
5477 7206 6.546772 AGCATTTCACAAAAACCCAAATCAAT 59.453 30.769 0.00 0.00 0.00 2.57
5483 7212 4.440880 CAGAGCATTTCACAAAAACCCAA 58.559 39.130 0.00 0.00 0.00 4.12
5520 7250 1.843851 TCACTTTGGGGCGAAGGATAT 59.156 47.619 0.00 0.00 0.00 1.63
5521 7251 1.209504 CTCACTTTGGGGCGAAGGATA 59.790 52.381 0.00 0.00 0.00 2.59
5528 7258 0.035056 AATCCTCTCACTTTGGGGCG 60.035 55.000 0.00 0.00 0.00 6.13
5531 7261 2.943199 GCTCCAATCCTCTCACTTTGGG 60.943 54.545 0.00 0.00 39.27 4.12
5545 7275 1.978617 CACCGCAAAGGGCTCCAAT 60.979 57.895 0.00 0.00 46.96 3.16
5560 7290 4.822685 ATCATGATCTATCTCTGCCACC 57.177 45.455 1.18 0.00 0.00 4.61
5586 7316 3.053077 CACCCAAAGGACCATATAGGGA 58.947 50.000 11.11 0.00 38.10 4.20
5589 7319 3.117888 ACTGCACCCAAAGGACCATATAG 60.118 47.826 0.00 0.00 36.73 1.31
5591 7321 1.640670 ACTGCACCCAAAGGACCATAT 59.359 47.619 0.00 0.00 36.73 1.78
5625 7355 0.521735 GTCAATTTGTGGAGTCCGGC 59.478 55.000 4.30 0.31 0.00 6.13
5635 7365 1.336755 GCGTTCAGTGGGTCAATTTGT 59.663 47.619 0.00 0.00 0.00 2.83
5636 7366 1.336440 TGCGTTCAGTGGGTCAATTTG 59.664 47.619 0.00 0.00 0.00 2.32
5637 7367 1.608590 CTGCGTTCAGTGGGTCAATTT 59.391 47.619 0.00 0.00 35.61 1.82
5640 7370 1.227823 CCTGCGTTCAGTGGGTCAA 60.228 57.895 0.00 0.00 38.66 3.18
5641 7371 2.137528 TCCTGCGTTCAGTGGGTCA 61.138 57.895 0.00 0.00 38.66 4.02
5642 7372 1.668151 GTCCTGCGTTCAGTGGGTC 60.668 63.158 0.00 0.00 38.66 4.46
5643 7373 2.426023 GTCCTGCGTTCAGTGGGT 59.574 61.111 0.00 0.00 38.66 4.51
5644 7374 2.358737 GGTCCTGCGTTCAGTGGG 60.359 66.667 0.00 0.00 38.66 4.61
5645 7375 1.961277 GTGGTCCTGCGTTCAGTGG 60.961 63.158 0.00 0.00 38.66 4.00
5646 7376 0.317160 TAGTGGTCCTGCGTTCAGTG 59.683 55.000 0.00 0.00 38.66 3.66
5647 7377 1.045407 TTAGTGGTCCTGCGTTCAGT 58.955 50.000 0.00 0.00 38.66 3.41
5648 7378 1.270094 TGTTAGTGGTCCTGCGTTCAG 60.270 52.381 0.00 0.00 40.02 3.02
5649 7379 0.753867 TGTTAGTGGTCCTGCGTTCA 59.246 50.000 0.00 0.00 0.00 3.18
5650 7380 1.429463 CTGTTAGTGGTCCTGCGTTC 58.571 55.000 0.00 0.00 0.00 3.95
5651 7381 0.034896 CCTGTTAGTGGTCCTGCGTT 59.965 55.000 0.00 0.00 0.00 4.84
5652 7382 0.830444 TCCTGTTAGTGGTCCTGCGT 60.830 55.000 0.00 0.00 0.00 5.24
5653 7383 0.389948 GTCCTGTTAGTGGTCCTGCG 60.390 60.000 0.00 0.00 0.00 5.18
5654 7384 0.685097 TGTCCTGTTAGTGGTCCTGC 59.315 55.000 0.00 0.00 0.00 4.85
5655 7385 1.276421 CCTGTCCTGTTAGTGGTCCTG 59.724 57.143 0.00 0.00 0.00 3.86
5656 7386 1.149288 TCCTGTCCTGTTAGTGGTCCT 59.851 52.381 0.00 0.00 0.00 3.85
5657 7387 1.550976 CTCCTGTCCTGTTAGTGGTCC 59.449 57.143 0.00 0.00 0.00 4.46
5658 7388 2.494073 CTCTCCTGTCCTGTTAGTGGTC 59.506 54.545 0.00 0.00 0.00 4.02
5659 7389 2.110188 TCTCTCCTGTCCTGTTAGTGGT 59.890 50.000 0.00 0.00 0.00 4.16
5660 7390 2.757868 CTCTCTCCTGTCCTGTTAGTGG 59.242 54.545 0.00 0.00 0.00 4.00
5661 7391 2.757868 CCTCTCTCCTGTCCTGTTAGTG 59.242 54.545 0.00 0.00 0.00 2.74
5662 7392 2.291930 CCCTCTCTCCTGTCCTGTTAGT 60.292 54.545 0.00 0.00 0.00 2.24
5663 7393 2.024846 TCCCTCTCTCCTGTCCTGTTAG 60.025 54.545 0.00 0.00 0.00 2.34
5664 7394 2.000803 TCCCTCTCTCCTGTCCTGTTA 58.999 52.381 0.00 0.00 0.00 2.41
5665 7395 0.787084 TCCCTCTCTCCTGTCCTGTT 59.213 55.000 0.00 0.00 0.00 3.16
5666 7396 0.787084 TTCCCTCTCTCCTGTCCTGT 59.213 55.000 0.00 0.00 0.00 4.00
5667 7397 1.944177 TTTCCCTCTCTCCTGTCCTG 58.056 55.000 0.00 0.00 0.00 3.86
5668 7398 2.723530 TTTTCCCTCTCTCCTGTCCT 57.276 50.000 0.00 0.00 0.00 3.85
5669 7399 2.640332 ACTTTTTCCCTCTCTCCTGTCC 59.360 50.000 0.00 0.00 0.00 4.02
5670 7400 4.068599 CAACTTTTTCCCTCTCTCCTGTC 58.931 47.826 0.00 0.00 0.00 3.51
5671 7401 3.716872 TCAACTTTTTCCCTCTCTCCTGT 59.283 43.478 0.00 0.00 0.00 4.00
5672 7402 4.068599 GTCAACTTTTTCCCTCTCTCCTG 58.931 47.826 0.00 0.00 0.00 3.86
5673 7403 3.073209 GGTCAACTTTTTCCCTCTCTCCT 59.927 47.826 0.00 0.00 0.00 3.69
5674 7404 3.413327 GGTCAACTTTTTCCCTCTCTCC 58.587 50.000 0.00 0.00 0.00 3.71
5675 7405 3.181443 TGGGTCAACTTTTTCCCTCTCTC 60.181 47.826 0.00 0.00 40.48 3.20
5676 7406 2.783510 TGGGTCAACTTTTTCCCTCTCT 59.216 45.455 0.00 0.00 40.48 3.10
5677 7407 3.223674 TGGGTCAACTTTTTCCCTCTC 57.776 47.619 0.00 0.00 40.48 3.20
5678 7408 3.566351 CTTGGGTCAACTTTTTCCCTCT 58.434 45.455 0.00 0.00 40.48 3.69
5679 7409 2.035961 GCTTGGGTCAACTTTTTCCCTC 59.964 50.000 0.00 0.00 40.48 4.30
5680 7410 2.039418 GCTTGGGTCAACTTTTTCCCT 58.961 47.619 0.00 0.00 40.48 4.20
5681 7411 1.269569 CGCTTGGGTCAACTTTTTCCC 60.270 52.381 0.00 0.00 40.26 3.97
5682 7412 1.269569 CCGCTTGGGTCAACTTTTTCC 60.270 52.381 0.00 0.00 0.00 3.13
5683 7413 1.679153 TCCGCTTGGGTCAACTTTTTC 59.321 47.619 0.00 0.00 37.00 2.29
5684 7414 1.407618 GTCCGCTTGGGTCAACTTTTT 59.592 47.619 0.00 0.00 37.00 1.94
5685 7415 1.029681 GTCCGCTTGGGTCAACTTTT 58.970 50.000 0.00 0.00 37.00 2.27
5686 7416 0.822121 GGTCCGCTTGGGTCAACTTT 60.822 55.000 0.00 0.00 37.00 2.66
5687 7417 1.228154 GGTCCGCTTGGGTCAACTT 60.228 57.895 0.00 0.00 37.00 2.66
5688 7418 2.430367 GGTCCGCTTGGGTCAACT 59.570 61.111 0.00 0.00 37.00 3.16
5689 7419 2.671963 GGGTCCGCTTGGGTCAAC 60.672 66.667 0.00 0.00 37.00 3.18
5714 7444 1.227973 GCCTGGGCGATAAAGGAGG 60.228 63.158 0.00 0.00 32.43 4.30
5726 7456 1.302832 GAATGCCGGATAGCCTGGG 60.303 63.158 5.05 0.00 0.00 4.45
5728 7458 0.321122 GAGGAATGCCGGATAGCCTG 60.321 60.000 5.05 0.00 39.96 4.85
5729 7459 0.764369 TGAGGAATGCCGGATAGCCT 60.764 55.000 5.05 5.74 39.96 4.58
5766 7496 1.451387 CACTCCACGTATTGCCCCC 60.451 63.158 0.00 0.00 0.00 5.40
5777 7507 3.626924 ACTGCCCGGACACTCCAC 61.627 66.667 0.73 0.00 35.91 4.02
5789 7529 3.127533 GGACGCATGACCACTGCC 61.128 66.667 0.00 0.00 36.24 4.85
5790 7530 3.490759 CGGACGCATGACCACTGC 61.491 66.667 0.00 0.00 36.26 4.40
5801 7541 1.956170 CATCCTATGTGGCGGACGC 60.956 63.158 8.39 8.39 41.06 5.19
5812 7552 1.965414 TGTGGTGGGTCACATCCTAT 58.035 50.000 0.38 0.00 42.05 2.57
5819 7559 2.507407 AATGGTATGTGGTGGGTCAC 57.493 50.000 0.00 0.00 38.09 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.