Multiple sequence alignment - TraesCS7D01G417600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G417600 chr7D 100.000 2800 0 0 1442 4241 536471085 536473884 0.000000e+00 5171.0
1 TraesCS7D01G417600 chr7D 100.000 1080 0 0 1 1080 536469644 536470723 0.000000e+00 1995.0
2 TraesCS7D01G417600 chr7D 81.923 1040 104 45 2884 3893 536491590 536492575 0.000000e+00 802.0
3 TraesCS7D01G417600 chr7D 93.511 262 16 1 2 263 22390646 22390386 5.140000e-104 388.0
4 TraesCS7D01G417600 chr7D 94.737 38 2 0 2347 2384 38097155 38097192 4.580000e-05 60.2
5 TraesCS7D01G417600 chr7B 89.854 1784 121 41 2490 4241 579668462 579670217 0.000000e+00 2237.0
6 TraesCS7D01G417600 chr7B 90.800 837 40 8 1508 2336 579667599 579668406 0.000000e+00 1085.0
7 TraesCS7D01G417600 chr7B 85.061 743 45 23 375 1080 579666808 579667521 0.000000e+00 697.0
8 TraesCS7D01G417600 chr7B 81.486 875 105 39 2885 3746 579778914 579779744 0.000000e+00 665.0
9 TraesCS7D01G417600 chr7A 91.629 884 45 17 1467 2339 616749437 616748572 0.000000e+00 1195.0
10 TraesCS7D01G417600 chr7A 92.159 778 43 8 2888 3656 616748133 616747365 0.000000e+00 1083.0
11 TraesCS7D01G417600 chr7A 87.977 707 52 20 375 1075 616750171 616749492 0.000000e+00 804.0
12 TraesCS7D01G417600 chr7A 96.552 319 8 2 2490 2807 616748521 616748205 3.760000e-145 525.0
13 TraesCS7D01G417600 chr7A 83.125 480 46 20 3281 3759 616734596 616734151 5.110000e-109 405.0
14 TraesCS7D01G417600 chr7A 94.828 58 3 0 3836 3893 616747359 616747302 1.620000e-14 91.6
15 TraesCS7D01G417600 chr5B 93.309 269 16 2 2 268 508255495 508255763 3.070000e-106 396.0
16 TraesCS7D01G417600 chr5A 94.208 259 15 0 2 260 649305544 649305802 3.070000e-106 396.0
17 TraesCS7D01G417600 chr3B 93.846 260 16 0 2 261 72598415 72598674 3.980000e-105 392.0
18 TraesCS7D01G417600 chr3B 91.882 271 20 2 2 271 781387834 781388103 1.110000e-100 377.0
19 TraesCS7D01G417600 chr6D 94.118 255 15 0 2 256 387560431 387560177 5.140000e-104 388.0
20 TraesCS7D01G417600 chr6B 94.118 255 15 0 2 256 207424568 207424822 5.140000e-104 388.0
21 TraesCS7D01G417600 chr4D 93.436 259 17 0 2 260 469949205 469948947 6.650000e-103 385.0
22 TraesCS7D01G417600 chr2B 93.462 260 16 1 2 261 314838381 314838123 6.650000e-103 385.0
23 TraesCS7D01G417600 chr4B 100.000 31 0 0 2354 2384 536101921 536101891 1.650000e-04 58.4
24 TraesCS7D01G417600 chr1A 94.595 37 2 0 2347 2383 59944543 59944507 1.650000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G417600 chr7D 536469644 536473884 4240 False 3583.000000 5171 100.000000 1 4241 2 chr7D.!!$F3 4240
1 TraesCS7D01G417600 chr7D 536491590 536492575 985 False 802.000000 802 81.923000 2884 3893 1 chr7D.!!$F2 1009
2 TraesCS7D01G417600 chr7B 579666808 579670217 3409 False 1339.666667 2237 88.571667 375 4241 3 chr7B.!!$F2 3866
3 TraesCS7D01G417600 chr7B 579778914 579779744 830 False 665.000000 665 81.486000 2885 3746 1 chr7B.!!$F1 861
4 TraesCS7D01G417600 chr7A 616747302 616750171 2869 True 739.720000 1195 92.629000 375 3893 5 chr7A.!!$R2 3518

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
284 285 0.035630 CTTCAAGAGACTGGGCCAGG 60.036 60.0 35.34 17.73 35.51 4.45 F
311 312 0.036765 TAAATGCGAGCACCGGAACT 60.037 50.0 9.46 4.09 43.17 3.01 F
313 314 0.036765 AATGCGAGCACCGGAACTTA 60.037 50.0 9.46 0.00 43.17 2.24 F
314 315 0.036765 ATGCGAGCACCGGAACTTAA 60.037 50.0 9.46 0.00 43.17 1.85 F
316 317 0.165295 GCGAGCACCGGAACTTAAAC 59.835 55.0 9.46 0.00 39.04 2.01 F
584 599 0.464013 GAGTCATGGAGCAGCAGCAT 60.464 55.0 3.17 0.00 45.49 3.79 F
645 674 0.806102 GACGACGGTGTCCATGATGG 60.806 60.0 4.74 4.74 39.43 3.51 F
2352 2423 0.035056 AGCCCCGATTGACTTTGAGG 60.035 55.0 0.00 0.00 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1688 1744 0.107508 ATTCTCACTGCCACGATGGG 60.108 55.000 6.23 0.0 38.19 4.00 R
1935 1997 1.337384 ATGGCCTGCGGTGACAGATA 61.337 55.000 3.32 0.0 40.25 1.98 R
2147 2218 3.623060 TGCAGAGGAACGAATATTTCAGC 59.377 43.478 0.00 0.0 0.00 4.26 R
2322 2393 0.986019 ATCGGGGCTTACCATCACCA 60.986 55.000 0.00 0.0 42.91 4.17 R
2341 2412 0.181587 TGCCGGTTCCTCAAAGTCAA 59.818 50.000 1.90 0.0 0.00 3.18 R
2342 2413 0.250295 CTGCCGGTTCCTCAAAGTCA 60.250 55.000 1.90 0.0 0.00 3.41 R
2430 2501 0.394216 CTCCCGCATGGATGTTGGAA 60.394 55.000 0.00 0.0 44.07 3.53 R
3610 3750 1.150536 TCAAGTGCCCTGTGAACCC 59.849 57.895 0.00 0.0 0.00 4.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.706322 AGGTTATTAAATGACCATGTTATCCC 57.294 34.615 6.26 0.00 41.10 3.85
27 28 8.511126 AGGTTATTAAATGACCATGTTATCCCT 58.489 33.333 6.26 0.00 41.10 4.20
28 29 9.802039 GGTTATTAAATGACCATGTTATCCCTA 57.198 33.333 0.00 0.00 38.68 3.53
35 36 8.736097 AATGACCATGTTATCCCTAGTATACA 57.264 34.615 5.50 0.00 0.00 2.29
36 37 7.776618 TGACCATGTTATCCCTAGTATACAG 57.223 40.000 5.50 0.84 0.00 2.74
37 38 7.532199 TGACCATGTTATCCCTAGTATACAGA 58.468 38.462 5.50 0.00 0.00 3.41
38 39 8.008332 TGACCATGTTATCCCTAGTATACAGAA 58.992 37.037 5.50 0.00 0.00 3.02
39 40 8.792830 ACCATGTTATCCCTAGTATACAGAAA 57.207 34.615 5.50 0.00 0.00 2.52
40 41 9.220906 ACCATGTTATCCCTAGTATACAGAAAA 57.779 33.333 5.50 0.00 0.00 2.29
49 50 9.895138 TCCCTAGTATACAGAAAAATAACAACC 57.105 33.333 5.50 0.00 0.00 3.77
50 51 9.675464 CCCTAGTATACAGAAAAATAACAACCA 57.325 33.333 5.50 0.00 0.00 3.67
59 60 9.320352 ACAGAAAAATAACAACCAAACAATACC 57.680 29.630 0.00 0.00 0.00 2.73
60 61 9.319143 CAGAAAAATAACAACCAAACAATACCA 57.681 29.630 0.00 0.00 0.00 3.25
63 64 8.614469 AAAATAACAACCAAACAATACCATGG 57.386 30.769 11.19 11.19 38.91 3.66
64 65 4.615588 AACAACCAAACAATACCATGGG 57.384 40.909 18.09 0.00 37.26 4.00
65 66 2.903135 ACAACCAAACAATACCATGGGG 59.097 45.455 18.09 7.29 37.26 4.96
66 67 1.567357 ACCAAACAATACCATGGGGC 58.433 50.000 18.09 0.00 37.26 5.80
67 68 0.459489 CCAAACAATACCATGGGGCG 59.541 55.000 18.09 3.86 37.90 6.13
68 69 0.459489 CAAACAATACCATGGGGCGG 59.541 55.000 18.09 5.43 37.90 6.13
69 70 1.326951 AAACAATACCATGGGGCGGC 61.327 55.000 18.09 0.00 37.90 6.53
70 71 3.286751 CAATACCATGGGGCGGCG 61.287 66.667 18.09 0.51 37.90 6.46
71 72 3.484806 AATACCATGGGGCGGCGA 61.485 61.111 18.09 0.00 37.90 5.54
72 73 3.476031 AATACCATGGGGCGGCGAG 62.476 63.158 18.09 0.00 37.90 5.03
82 83 3.869272 GCGGCGAGGCAATGAGTG 61.869 66.667 12.98 0.00 0.00 3.51
92 93 2.877975 CAATGAGTGCAGGAAGGGG 58.122 57.895 0.00 0.00 0.00 4.79
93 94 1.000396 AATGAGTGCAGGAAGGGGC 60.000 57.895 0.00 0.00 0.00 5.80
94 95 1.792757 AATGAGTGCAGGAAGGGGCA 61.793 55.000 0.00 0.00 37.77 5.36
95 96 1.578215 ATGAGTGCAGGAAGGGGCAT 61.578 55.000 0.00 0.00 42.75 4.40
96 97 1.000396 GAGTGCAGGAAGGGGCATT 60.000 57.895 0.00 0.00 42.75 3.56
97 98 1.304713 AGTGCAGGAAGGGGCATTG 60.305 57.895 0.00 0.00 42.75 2.82
98 99 1.607467 GTGCAGGAAGGGGCATTGT 60.607 57.895 0.00 0.00 42.75 2.71
99 100 1.155859 TGCAGGAAGGGGCATTGTT 59.844 52.632 0.00 0.00 34.58 2.83
100 101 1.186917 TGCAGGAAGGGGCATTGTTG 61.187 55.000 0.00 0.00 34.58 3.33
101 102 1.891722 GCAGGAAGGGGCATTGTTGG 61.892 60.000 0.00 0.00 0.00 3.77
102 103 0.251742 CAGGAAGGGGCATTGTTGGA 60.252 55.000 0.00 0.00 0.00 3.53
103 104 0.486879 AGGAAGGGGCATTGTTGGAA 59.513 50.000 0.00 0.00 0.00 3.53
104 105 1.132881 AGGAAGGGGCATTGTTGGAAA 60.133 47.619 0.00 0.00 0.00 3.13
105 106 1.696884 GGAAGGGGCATTGTTGGAAAA 59.303 47.619 0.00 0.00 0.00 2.29
106 107 2.289631 GGAAGGGGCATTGTTGGAAAAG 60.290 50.000 0.00 0.00 0.00 2.27
107 108 2.101640 AGGGGCATTGTTGGAAAAGT 57.898 45.000 0.00 0.00 0.00 2.66
108 109 1.970640 AGGGGCATTGTTGGAAAAGTC 59.029 47.619 0.00 0.00 0.00 3.01
109 110 1.001974 GGGGCATTGTTGGAAAAGTCC 59.998 52.381 0.00 0.00 45.21 3.85
110 111 1.001974 GGGCATTGTTGGAAAAGTCCC 59.998 52.381 0.00 0.00 44.23 4.46
111 112 1.691434 GGCATTGTTGGAAAAGTCCCA 59.309 47.619 0.00 0.00 44.23 4.37
112 113 2.103941 GGCATTGTTGGAAAAGTCCCAA 59.896 45.455 0.00 0.00 44.23 4.12
113 114 3.432890 GGCATTGTTGGAAAAGTCCCAAA 60.433 43.478 0.00 0.00 44.41 3.28
114 115 4.195416 GCATTGTTGGAAAAGTCCCAAAA 58.805 39.130 0.00 0.00 44.41 2.44
115 116 4.637977 GCATTGTTGGAAAAGTCCCAAAAA 59.362 37.500 0.00 0.00 44.41 1.94
167 168 9.783256 TTTAGTCTCAAAAAGCAACTTTTAGTC 57.217 29.630 5.79 0.33 41.98 2.59
168 169 6.796426 AGTCTCAAAAAGCAACTTTTAGTCC 58.204 36.000 5.79 0.00 41.98 3.85
169 170 5.977725 GTCTCAAAAAGCAACTTTTAGTCCC 59.022 40.000 5.79 0.00 41.98 4.46
170 171 5.891551 TCTCAAAAAGCAACTTTTAGTCCCT 59.108 36.000 5.79 0.00 41.98 4.20
171 172 7.012989 GTCTCAAAAAGCAACTTTTAGTCCCTA 59.987 37.037 5.79 0.00 41.98 3.53
172 173 7.558444 TCTCAAAAAGCAACTTTTAGTCCCTAA 59.442 33.333 5.79 0.00 41.98 2.69
173 174 8.245195 TCAAAAAGCAACTTTTAGTCCCTAAT 57.755 30.769 5.79 0.00 41.98 1.73
174 175 9.357161 TCAAAAAGCAACTTTTAGTCCCTAATA 57.643 29.630 5.79 0.00 41.98 0.98
175 176 9.626045 CAAAAAGCAACTTTTAGTCCCTAATAG 57.374 33.333 5.79 0.00 41.98 1.73
176 177 8.935614 AAAAGCAACTTTTAGTCCCTAATAGT 57.064 30.769 3.57 2.51 41.17 2.12
177 178 8.563123 AAAGCAACTTTTAGTCCCTAATAGTC 57.437 34.615 7.31 0.00 37.29 2.59
178 179 6.651086 AGCAACTTTTAGTCCCTAATAGTCC 58.349 40.000 7.31 3.81 37.29 3.85
179 180 5.821470 GCAACTTTTAGTCCCTAATAGTCCC 59.179 44.000 7.31 0.90 37.29 4.46
180 181 6.352823 GCAACTTTTAGTCCCTAATAGTCCCT 60.353 42.308 7.31 0.00 37.29 4.20
181 182 7.273712 CAACTTTTAGTCCCTAATAGTCCCTC 58.726 42.308 7.31 0.00 37.29 4.30
182 183 6.509386 ACTTTTAGTCCCTAATAGTCCCTCA 58.491 40.000 2.51 0.00 34.75 3.86
183 184 7.140304 ACTTTTAGTCCCTAATAGTCCCTCAT 58.860 38.462 2.51 0.00 34.75 2.90
184 185 6.996180 TTTAGTCCCTAATAGTCCCTCATG 57.004 41.667 0.00 0.00 0.00 3.07
185 186 4.561254 AGTCCCTAATAGTCCCTCATGT 57.439 45.455 0.00 0.00 0.00 3.21
186 187 4.897051 AGTCCCTAATAGTCCCTCATGTT 58.103 43.478 0.00 0.00 0.00 2.71
187 188 5.289510 AGTCCCTAATAGTCCCTCATGTTT 58.710 41.667 0.00 0.00 0.00 2.83
188 189 5.131142 AGTCCCTAATAGTCCCTCATGTTTG 59.869 44.000 0.00 0.00 0.00 2.93
189 190 4.412199 TCCCTAATAGTCCCTCATGTTTGG 59.588 45.833 0.00 0.00 0.00 3.28
190 191 4.166144 CCCTAATAGTCCCTCATGTTTGGT 59.834 45.833 0.00 0.00 0.00 3.67
191 192 5.340027 CCCTAATAGTCCCTCATGTTTGGTT 60.340 44.000 0.00 0.00 0.00 3.67
192 193 6.126594 CCCTAATAGTCCCTCATGTTTGGTTA 60.127 42.308 0.00 0.00 0.00 2.85
193 194 7.343357 CCTAATAGTCCCTCATGTTTGGTTAA 58.657 38.462 0.00 0.00 0.00 2.01
194 195 7.832187 CCTAATAGTCCCTCATGTTTGGTTAAA 59.168 37.037 0.00 0.00 0.00 1.52
195 196 9.238368 CTAATAGTCCCTCATGTTTGGTTAAAA 57.762 33.333 0.00 0.00 0.00 1.52
196 197 8.485578 AATAGTCCCTCATGTTTGGTTAAAAA 57.514 30.769 0.00 0.00 0.00 1.94
197 198 6.405278 AGTCCCTCATGTTTGGTTAAAAAG 57.595 37.500 0.00 0.00 0.00 2.27
198 199 5.897250 AGTCCCTCATGTTTGGTTAAAAAGT 59.103 36.000 0.00 0.00 0.00 2.66
199 200 6.040504 AGTCCCTCATGTTTGGTTAAAAAGTC 59.959 38.462 0.00 0.00 0.00 3.01
200 201 6.040504 GTCCCTCATGTTTGGTTAAAAAGTCT 59.959 38.462 0.00 0.00 0.00 3.24
201 202 6.264518 TCCCTCATGTTTGGTTAAAAAGTCTC 59.735 38.462 0.00 0.00 0.00 3.36
202 203 6.265422 CCCTCATGTTTGGTTAAAAAGTCTCT 59.735 38.462 0.00 0.00 0.00 3.10
203 204 7.447238 CCCTCATGTTTGGTTAAAAAGTCTCTA 59.553 37.037 0.00 0.00 0.00 2.43
204 205 8.846211 CCTCATGTTTGGTTAAAAAGTCTCTAA 58.154 33.333 0.00 0.00 0.00 2.10
205 206 9.884465 CTCATGTTTGGTTAAAAAGTCTCTAAG 57.116 33.333 0.00 0.00 0.00 2.18
206 207 9.621629 TCATGTTTGGTTAAAAAGTCTCTAAGA 57.378 29.630 0.00 0.00 0.00 2.10
207 208 9.884465 CATGTTTGGTTAAAAAGTCTCTAAGAG 57.116 33.333 0.00 0.00 0.00 2.85
208 209 8.446599 TGTTTGGTTAAAAAGTCTCTAAGAGG 57.553 34.615 0.00 0.00 0.00 3.69
209 210 8.269317 TGTTTGGTTAAAAAGTCTCTAAGAGGA 58.731 33.333 0.00 0.00 0.00 3.71
210 211 9.117183 GTTTGGTTAAAAAGTCTCTAAGAGGAA 57.883 33.333 0.00 0.00 0.00 3.36
211 212 8.672823 TTGGTTAAAAAGTCTCTAAGAGGAAC 57.327 34.615 0.00 0.00 0.00 3.62
213 214 8.491958 TGGTTAAAAAGTCTCTAAGAGGAACTT 58.508 33.333 0.00 0.00 41.55 2.66
214 215 9.339850 GGTTAAAAAGTCTCTAAGAGGAACTTT 57.660 33.333 9.09 9.09 41.55 2.66
218 219 9.688091 AAAAAGTCTCTAAGAGGAACTTTTTCT 57.312 29.630 21.90 11.46 41.55 2.52
220 221 9.990360 AAAGTCTCTAAGAGGAACTTTTTCTAG 57.010 33.333 9.09 0.00 41.55 2.43
221 222 8.715190 AGTCTCTAAGAGGAACTTTTTCTAGT 57.285 34.615 0.00 0.00 41.55 2.57
222 223 8.799367 AGTCTCTAAGAGGAACTTTTTCTAGTC 58.201 37.037 0.00 0.00 41.55 2.59
223 224 8.030692 GTCTCTAAGAGGAACTTTTTCTAGTCC 58.969 40.741 0.00 0.00 41.55 3.85
224 225 7.178805 TCTCTAAGAGGAACTTTTTCTAGTCCC 59.821 40.741 0.00 0.00 41.55 4.46
225 226 7.017531 TCTAAGAGGAACTTTTTCTAGTCCCT 58.982 38.462 0.00 0.00 41.55 4.20
226 227 8.175431 TCTAAGAGGAACTTTTTCTAGTCCCTA 58.825 37.037 0.00 0.00 41.55 3.53
227 228 6.608539 AGAGGAACTTTTTCTAGTCCCTAC 57.391 41.667 0.00 0.00 41.55 3.18
228 229 6.082707 AGAGGAACTTTTTCTAGTCCCTACA 58.917 40.000 0.00 0.00 41.55 2.74
229 230 6.014413 AGAGGAACTTTTTCTAGTCCCTACAC 60.014 42.308 0.00 0.00 41.55 2.90
230 231 5.012871 AGGAACTTTTTCTAGTCCCTACACC 59.987 44.000 0.00 0.00 30.11 4.16
231 232 5.221783 GGAACTTTTTCTAGTCCCTACACCA 60.222 44.000 0.00 0.00 31.71 4.17
232 233 5.899631 ACTTTTTCTAGTCCCTACACCAA 57.100 39.130 0.00 0.00 0.00 3.67
233 234 6.256643 ACTTTTTCTAGTCCCTACACCAAA 57.743 37.500 0.00 0.00 0.00 3.28
234 235 6.665695 ACTTTTTCTAGTCCCTACACCAAAA 58.334 36.000 0.00 0.00 0.00 2.44
235 236 7.120716 ACTTTTTCTAGTCCCTACACCAAAAA 58.879 34.615 0.00 0.00 0.00 1.94
236 237 7.284716 ACTTTTTCTAGTCCCTACACCAAAAAG 59.715 37.037 13.11 13.11 39.45 2.27
237 238 5.899631 TTCTAGTCCCTACACCAAAAAGT 57.100 39.130 0.00 0.00 0.00 2.66
238 239 5.479124 TCTAGTCCCTACACCAAAAAGTC 57.521 43.478 0.00 0.00 0.00 3.01
239 240 3.503800 AGTCCCTACACCAAAAAGTCC 57.496 47.619 0.00 0.00 0.00 3.85
240 241 2.107726 AGTCCCTACACCAAAAAGTCCC 59.892 50.000 0.00 0.00 0.00 4.46
241 242 2.107726 GTCCCTACACCAAAAAGTCCCT 59.892 50.000 0.00 0.00 0.00 4.20
242 243 2.107552 TCCCTACACCAAAAAGTCCCTG 59.892 50.000 0.00 0.00 0.00 4.45
243 244 2.514803 CCTACACCAAAAAGTCCCTGG 58.485 52.381 0.00 0.00 36.24 4.45
244 245 2.107552 CCTACACCAAAAAGTCCCTGGA 59.892 50.000 0.00 0.00 34.16 3.86
245 246 2.838637 ACACCAAAAAGTCCCTGGAA 57.161 45.000 0.00 0.00 34.16 3.53
246 247 3.108847 ACACCAAAAAGTCCCTGGAAA 57.891 42.857 0.00 0.00 34.16 3.13
247 248 2.764010 ACACCAAAAAGTCCCTGGAAAC 59.236 45.455 0.00 0.00 34.16 2.78
248 249 2.763448 CACCAAAAAGTCCCTGGAAACA 59.237 45.455 0.00 0.00 39.59 2.83
249 250 3.196685 CACCAAAAAGTCCCTGGAAACAA 59.803 43.478 0.00 0.00 42.06 2.83
250 251 3.841255 ACCAAAAAGTCCCTGGAAACAAA 59.159 39.130 0.00 0.00 42.06 2.83
251 252 4.188462 CCAAAAAGTCCCTGGAAACAAAC 58.812 43.478 0.00 0.00 42.06 2.93
252 253 4.323104 CCAAAAAGTCCCTGGAAACAAACA 60.323 41.667 0.00 0.00 42.06 2.83
253 254 4.465632 AAAAGTCCCTGGAAACAAACAC 57.534 40.909 0.00 0.00 42.06 3.32
254 255 2.067365 AGTCCCTGGAAACAAACACC 57.933 50.000 0.00 0.00 42.06 4.16
255 256 1.037493 GTCCCTGGAAACAAACACCC 58.963 55.000 0.00 0.00 42.06 4.61
256 257 0.930726 TCCCTGGAAACAAACACCCT 59.069 50.000 0.00 0.00 42.06 4.34
257 258 1.133606 TCCCTGGAAACAAACACCCTC 60.134 52.381 0.00 0.00 42.06 4.30
258 259 1.133482 CCCTGGAAACAAACACCCTCT 60.133 52.381 0.00 0.00 42.06 3.69
259 260 1.956477 CCTGGAAACAAACACCCTCTG 59.044 52.381 0.00 0.00 42.06 3.35
260 261 2.422803 CCTGGAAACAAACACCCTCTGA 60.423 50.000 0.00 0.00 42.06 3.27
261 262 2.880890 CTGGAAACAAACACCCTCTGAG 59.119 50.000 0.00 0.00 42.06 3.35
262 263 2.241176 TGGAAACAAACACCCTCTGAGT 59.759 45.455 3.66 0.00 37.44 3.41
263 264 3.456644 TGGAAACAAACACCCTCTGAGTA 59.543 43.478 3.66 0.00 37.44 2.59
264 265 4.104102 TGGAAACAAACACCCTCTGAGTAT 59.896 41.667 3.66 0.00 37.44 2.12
265 266 4.695928 GGAAACAAACACCCTCTGAGTATC 59.304 45.833 3.66 0.00 0.00 2.24
266 267 5.513267 GGAAACAAACACCCTCTGAGTATCT 60.513 44.000 3.66 0.00 34.92 1.98
267 268 5.568620 AACAAACACCCTCTGAGTATCTT 57.431 39.130 3.66 0.00 34.92 2.40
268 269 5.153950 ACAAACACCCTCTGAGTATCTTC 57.846 43.478 3.66 0.00 34.92 2.87
269 270 4.593206 ACAAACACCCTCTGAGTATCTTCA 59.407 41.667 3.66 0.00 34.92 3.02
270 271 5.071788 ACAAACACCCTCTGAGTATCTTCAA 59.928 40.000 3.66 0.00 34.92 2.69
271 272 5.413309 AACACCCTCTGAGTATCTTCAAG 57.587 43.478 3.66 0.00 34.92 3.02
272 273 4.678256 ACACCCTCTGAGTATCTTCAAGA 58.322 43.478 3.66 0.00 34.92 3.02
273 274 4.709397 ACACCCTCTGAGTATCTTCAAGAG 59.291 45.833 3.66 0.00 34.92 2.85
274 275 4.952957 CACCCTCTGAGTATCTTCAAGAGA 59.047 45.833 3.66 0.00 39.13 3.10
275 276 4.953579 ACCCTCTGAGTATCTTCAAGAGAC 59.046 45.833 3.82 3.82 36.74 3.36
277 278 5.067674 CCCTCTGAGTATCTTCAAGAGACTG 59.932 48.000 19.47 6.32 45.81 3.51
278 279 5.067674 CCTCTGAGTATCTTCAAGAGACTGG 59.932 48.000 19.47 10.26 45.81 4.00
279 280 4.952957 TCTGAGTATCTTCAAGAGACTGGG 59.047 45.833 19.47 11.16 45.81 4.45
280 281 3.449018 TGAGTATCTTCAAGAGACTGGGC 59.551 47.826 19.47 5.97 45.81 5.36
281 282 2.769095 AGTATCTTCAAGAGACTGGGCC 59.231 50.000 14.02 0.00 44.32 5.80
282 283 1.661463 ATCTTCAAGAGACTGGGCCA 58.339 50.000 5.85 5.85 37.17 5.36
283 284 0.979665 TCTTCAAGAGACTGGGCCAG 59.020 55.000 31.62 31.62 37.52 4.85
284 285 0.035630 CTTCAAGAGACTGGGCCAGG 60.036 60.000 35.34 17.73 35.51 4.45
285 286 0.768221 TTCAAGAGACTGGGCCAGGT 60.768 55.000 35.34 23.19 35.51 4.00
286 287 1.194781 TCAAGAGACTGGGCCAGGTC 61.195 60.000 35.34 28.98 35.51 3.85
287 288 1.920835 AAGAGACTGGGCCAGGTCC 60.921 63.158 35.34 23.29 35.51 4.46
288 289 2.607750 GAGACTGGGCCAGGTCCA 60.608 66.667 35.34 13.79 35.34 4.02
294 295 3.742422 TGGGCCAGGTCCAGTATAA 57.258 52.632 9.47 0.00 29.54 0.98
295 296 1.974028 TGGGCCAGGTCCAGTATAAA 58.026 50.000 9.47 0.00 29.54 1.40
296 297 2.498441 TGGGCCAGGTCCAGTATAAAT 58.502 47.619 9.47 0.00 29.54 1.40
297 298 2.174639 TGGGCCAGGTCCAGTATAAATG 59.825 50.000 9.47 0.00 29.54 2.32
298 299 2.230660 GGCCAGGTCCAGTATAAATGC 58.769 52.381 0.00 0.00 0.00 3.56
299 300 1.873591 GCCAGGTCCAGTATAAATGCG 59.126 52.381 0.00 0.00 0.00 4.73
300 301 2.484770 GCCAGGTCCAGTATAAATGCGA 60.485 50.000 0.00 0.00 0.00 5.10
301 302 3.393800 CCAGGTCCAGTATAAATGCGAG 58.606 50.000 0.00 0.00 0.00 5.03
302 303 2.802816 CAGGTCCAGTATAAATGCGAGC 59.197 50.000 0.00 0.00 0.00 5.03
303 304 2.434336 AGGTCCAGTATAAATGCGAGCA 59.566 45.455 0.00 0.00 0.00 4.26
304 305 2.544267 GGTCCAGTATAAATGCGAGCAC 59.456 50.000 0.00 0.00 0.00 4.40
305 306 2.544267 GTCCAGTATAAATGCGAGCACC 59.456 50.000 0.00 0.00 0.00 5.01
306 307 1.526887 CCAGTATAAATGCGAGCACCG 59.473 52.381 0.00 0.00 42.21 4.94
307 308 1.526887 CAGTATAAATGCGAGCACCGG 59.473 52.381 0.00 0.00 39.04 5.28
308 309 1.411246 AGTATAAATGCGAGCACCGGA 59.589 47.619 9.46 0.00 44.31 5.14
309 310 2.159014 AGTATAAATGCGAGCACCGGAA 60.159 45.455 9.46 0.00 43.17 4.30
310 311 1.014352 ATAAATGCGAGCACCGGAAC 58.986 50.000 9.46 0.00 43.17 3.62
311 312 0.036765 TAAATGCGAGCACCGGAACT 60.037 50.000 9.46 4.09 43.17 3.01
312 313 0.889186 AAATGCGAGCACCGGAACTT 60.889 50.000 9.46 0.00 43.17 2.66
313 314 0.036765 AATGCGAGCACCGGAACTTA 60.037 50.000 9.46 0.00 43.17 2.24
314 315 0.036765 ATGCGAGCACCGGAACTTAA 60.037 50.000 9.46 0.00 43.17 1.85
315 316 0.249953 TGCGAGCACCGGAACTTAAA 60.250 50.000 9.46 0.00 39.04 1.52
316 317 0.165295 GCGAGCACCGGAACTTAAAC 59.835 55.000 9.46 0.00 39.04 2.01
317 318 0.794473 CGAGCACCGGAACTTAAACC 59.206 55.000 9.46 0.00 33.91 3.27
318 319 1.162698 GAGCACCGGAACTTAAACCC 58.837 55.000 9.46 0.00 0.00 4.11
319 320 0.769247 AGCACCGGAACTTAAACCCT 59.231 50.000 9.46 0.00 0.00 4.34
320 321 0.879090 GCACCGGAACTTAAACCCTG 59.121 55.000 9.46 0.00 0.00 4.45
321 322 1.543871 GCACCGGAACTTAAACCCTGA 60.544 52.381 9.46 0.00 0.00 3.86
322 323 2.878526 GCACCGGAACTTAAACCCTGAT 60.879 50.000 9.46 0.00 0.00 2.90
323 324 2.747446 CACCGGAACTTAAACCCTGATG 59.253 50.000 9.46 0.00 0.00 3.07
324 325 2.640826 ACCGGAACTTAAACCCTGATGA 59.359 45.455 9.46 0.00 0.00 2.92
325 326 3.270877 CCGGAACTTAAACCCTGATGAG 58.729 50.000 0.00 0.00 0.00 2.90
326 327 2.678336 CGGAACTTAAACCCTGATGAGC 59.322 50.000 0.00 0.00 0.00 4.26
327 328 3.619979 CGGAACTTAAACCCTGATGAGCT 60.620 47.826 0.00 0.00 0.00 4.09
328 329 3.691609 GGAACTTAAACCCTGATGAGCTG 59.308 47.826 0.00 0.00 0.00 4.24
329 330 3.356529 ACTTAAACCCTGATGAGCTGG 57.643 47.619 0.00 0.00 35.50 4.85
330 331 2.912956 ACTTAAACCCTGATGAGCTGGA 59.087 45.455 0.00 0.00 37.79 3.86
331 332 3.525199 ACTTAAACCCTGATGAGCTGGAT 59.475 43.478 0.00 0.00 37.79 3.41
332 333 4.721776 ACTTAAACCCTGATGAGCTGGATA 59.278 41.667 0.00 0.00 37.79 2.59
333 334 5.370880 ACTTAAACCCTGATGAGCTGGATAT 59.629 40.000 0.00 0.00 37.79 1.63
334 335 4.363991 AAACCCTGATGAGCTGGATATC 57.636 45.455 0.00 0.00 37.79 1.63
335 336 2.981921 ACCCTGATGAGCTGGATATCA 58.018 47.619 4.83 0.00 37.79 2.15
336 337 2.636893 ACCCTGATGAGCTGGATATCAC 59.363 50.000 4.83 0.00 37.79 3.06
337 338 2.905085 CCCTGATGAGCTGGATATCACT 59.095 50.000 4.83 0.00 37.79 3.41
338 339 3.306849 CCCTGATGAGCTGGATATCACTG 60.307 52.174 4.83 0.02 37.79 3.66
339 340 3.324268 CCTGATGAGCTGGATATCACTGT 59.676 47.826 4.83 0.00 37.79 3.55
340 341 4.558178 CTGATGAGCTGGATATCACTGTC 58.442 47.826 4.83 0.00 0.00 3.51
341 342 3.323115 TGATGAGCTGGATATCACTGTCC 59.677 47.826 4.83 0.00 33.41 4.02
342 343 2.750814 TGAGCTGGATATCACTGTCCA 58.249 47.619 4.83 0.00 40.08 4.02
343 344 2.432146 TGAGCTGGATATCACTGTCCAC 59.568 50.000 4.83 0.00 37.71 4.02
344 345 1.765314 AGCTGGATATCACTGTCCACC 59.235 52.381 4.83 0.00 37.71 4.61
345 346 1.765314 GCTGGATATCACTGTCCACCT 59.235 52.381 4.83 0.00 37.71 4.00
346 347 2.965831 GCTGGATATCACTGTCCACCTA 59.034 50.000 4.83 0.00 37.71 3.08
347 348 3.388024 GCTGGATATCACTGTCCACCTAA 59.612 47.826 4.83 0.00 37.71 2.69
348 349 4.040952 GCTGGATATCACTGTCCACCTAAT 59.959 45.833 4.83 0.00 37.71 1.73
349 350 5.788450 CTGGATATCACTGTCCACCTAATC 58.212 45.833 4.83 0.00 37.71 1.75
350 351 5.215845 TGGATATCACTGTCCACCTAATCA 58.784 41.667 4.83 0.00 37.71 2.57
351 352 5.846164 TGGATATCACTGTCCACCTAATCAT 59.154 40.000 4.83 0.00 37.71 2.45
352 353 6.329986 TGGATATCACTGTCCACCTAATCATT 59.670 38.462 4.83 0.00 37.71 2.57
353 354 7.147320 TGGATATCACTGTCCACCTAATCATTT 60.147 37.037 4.83 0.00 37.71 2.32
354 355 8.375506 GGATATCACTGTCCACCTAATCATTTA 58.624 37.037 4.83 0.00 33.05 1.40
355 356 9.778741 GATATCACTGTCCACCTAATCATTTAA 57.221 33.333 0.00 0.00 0.00 1.52
356 357 7.865706 ATCACTGTCCACCTAATCATTTAAC 57.134 36.000 0.00 0.00 0.00 2.01
357 358 7.016153 TCACTGTCCACCTAATCATTTAACT 57.984 36.000 0.00 0.00 0.00 2.24
358 359 8.141298 TCACTGTCCACCTAATCATTTAACTA 57.859 34.615 0.00 0.00 0.00 2.24
359 360 8.038944 TCACTGTCCACCTAATCATTTAACTAC 58.961 37.037 0.00 0.00 0.00 2.73
360 361 7.822334 CACTGTCCACCTAATCATTTAACTACA 59.178 37.037 0.00 0.00 0.00 2.74
361 362 8.041323 ACTGTCCACCTAATCATTTAACTACAG 58.959 37.037 0.00 0.00 35.43 2.74
362 363 7.913789 TGTCCACCTAATCATTTAACTACAGT 58.086 34.615 0.00 0.00 0.00 3.55
363 364 8.380099 TGTCCACCTAATCATTTAACTACAGTT 58.620 33.333 0.00 0.00 41.73 3.16
364 365 9.227777 GTCCACCTAATCATTTAACTACAGTTT 57.772 33.333 0.00 0.00 39.31 2.66
365 366 9.226606 TCCACCTAATCATTTAACTACAGTTTG 57.773 33.333 0.00 0.00 39.31 2.93
366 367 8.458843 CCACCTAATCATTTAACTACAGTTTGG 58.541 37.037 0.00 0.00 39.31 3.28
367 368 7.968405 CACCTAATCATTTAACTACAGTTTGGC 59.032 37.037 0.00 0.00 39.31 4.52
368 369 7.888546 ACCTAATCATTTAACTACAGTTTGGCT 59.111 33.333 0.00 0.00 39.31 4.75
369 370 8.398665 CCTAATCATTTAACTACAGTTTGGCTC 58.601 37.037 0.00 0.00 39.31 4.70
370 371 5.856126 TCATTTAACTACAGTTTGGCTCG 57.144 39.130 0.00 0.00 39.31 5.03
371 372 4.153475 TCATTTAACTACAGTTTGGCTCGC 59.847 41.667 0.00 0.00 39.31 5.03
372 373 2.823924 TAACTACAGTTTGGCTCGCA 57.176 45.000 0.00 0.00 39.31 5.10
373 374 1.512926 AACTACAGTTTGGCTCGCAG 58.487 50.000 0.00 0.00 33.93 5.18
387 388 4.719106 GCAGCAGGGCAGCACTCT 62.719 66.667 0.00 0.00 40.73 3.24
388 389 2.436292 CAGCAGGGCAGCACTCTC 60.436 66.667 0.00 0.00 36.85 3.20
390 391 4.385405 GCAGGGCAGCACTCTCGT 62.385 66.667 0.00 0.00 0.00 4.18
482 486 2.262915 CACGCTTTCCTCTCGCCT 59.737 61.111 0.00 0.00 0.00 5.52
534 538 2.280186 CCTAATCCACGAGCGCCC 60.280 66.667 2.29 0.00 0.00 6.13
583 598 1.078637 GAGTCATGGAGCAGCAGCA 60.079 57.895 3.17 0.00 45.49 4.41
584 599 0.464013 GAGTCATGGAGCAGCAGCAT 60.464 55.000 3.17 0.00 45.49 3.79
600 615 1.092345 GCATGCGGGAGGAGAAGAAC 61.092 60.000 0.00 0.00 0.00 3.01
645 674 0.806102 GACGACGGTGTCCATGATGG 60.806 60.000 4.74 4.74 39.43 3.51
650 679 1.076777 GGTGTCCATGATGGTGGGG 60.077 63.158 11.87 0.00 39.03 4.96
651 680 1.076777 GTGTCCATGATGGTGGGGG 60.077 63.158 11.87 0.00 39.03 5.40
652 681 2.123726 GTCCATGATGGTGGGGGC 60.124 66.667 11.87 0.00 39.03 5.80
654 683 3.807839 CCATGATGGTGGGGGCGA 61.808 66.667 2.54 0.00 35.55 5.54
864 910 1.202592 GCCTCCGATTTCTCCTCTTCC 60.203 57.143 0.00 0.00 0.00 3.46
1503 1559 5.334879 GCTTCGGCTTTTAAACTTCTGATGA 60.335 40.000 0.00 0.00 38.08 2.92
1504 1560 6.623767 GCTTCGGCTTTTAAACTTCTGATGAT 60.624 38.462 0.00 0.00 38.08 2.45
1505 1561 6.182039 TCGGCTTTTAAACTTCTGATGATG 57.818 37.500 0.00 0.00 0.00 3.07
1506 1562 4.795278 CGGCTTTTAAACTTCTGATGATGC 59.205 41.667 0.00 0.00 0.00 3.91
1531 1587 2.172679 TCATGCATGCTGTGGAAATGT 58.827 42.857 22.25 0.00 0.00 2.71
1532 1588 2.563620 TCATGCATGCTGTGGAAATGTT 59.436 40.909 22.25 0.00 0.00 2.71
1579 1635 9.979578 AGCAAATTTGTTCTTGTTGATGTTATA 57.020 25.926 19.03 0.00 0.00 0.98
1610 1666 9.034544 CATGTTCTAACATTCTAATGACGATGA 57.965 33.333 9.60 0.00 46.95 2.92
1611 1667 8.407457 TGTTCTAACATTCTAATGACGATGAC 57.593 34.615 9.60 2.56 39.67 3.06
1614 1670 7.477494 TCTAACATTCTAATGACGATGACGAA 58.523 34.615 9.60 0.00 39.59 3.85
1615 1671 8.135529 TCTAACATTCTAATGACGATGACGAAT 58.864 33.333 9.60 0.00 39.59 3.34
1616 1672 7.539712 AACATTCTAATGACGATGACGAATT 57.460 32.000 9.60 0.00 39.59 2.17
1617 1673 8.642908 AACATTCTAATGACGATGACGAATTA 57.357 30.769 9.60 0.00 39.59 1.40
1891 1953 6.397272 TGCAAATAAGCATTTTAGGTTCAGG 58.603 36.000 0.00 0.00 40.11 3.86
1911 1973 1.339929 GGTTACCACCAAACTGCCTTG 59.660 52.381 0.00 0.00 43.61 3.61
2114 2185 4.492791 TCAGAACACATTGCAGAACATG 57.507 40.909 0.00 0.00 0.00 3.21
2116 2187 4.023792 TCAGAACACATTGCAGAACATGTC 60.024 41.667 0.00 0.00 0.00 3.06
2319 2390 1.760613 TCTAGGGCGGTCATTTGTAGG 59.239 52.381 0.00 0.00 0.00 3.18
2322 2393 1.301954 GGCGGTCATTTGTAGGGGT 59.698 57.895 0.00 0.00 0.00 4.95
2336 2407 1.076995 GGGGTGGTGATGGTAAGCC 60.077 63.158 0.00 0.00 0.00 4.35
2339 2410 1.451387 GTGGTGATGGTAAGCCCCG 60.451 63.158 0.00 0.00 0.00 5.73
2341 2412 0.986019 TGGTGATGGTAAGCCCCGAT 60.986 55.000 0.00 0.00 0.00 4.18
2342 2413 0.182775 GGTGATGGTAAGCCCCGATT 59.817 55.000 0.00 0.00 0.00 3.34
2346 2417 1.141053 GATGGTAAGCCCCGATTGACT 59.859 52.381 0.00 0.00 0.00 3.41
2348 2419 1.353022 TGGTAAGCCCCGATTGACTTT 59.647 47.619 0.00 0.00 0.00 2.66
2349 2420 1.743394 GGTAAGCCCCGATTGACTTTG 59.257 52.381 0.00 0.00 0.00 2.77
2350 2421 2.617021 GGTAAGCCCCGATTGACTTTGA 60.617 50.000 0.00 0.00 0.00 2.69
2351 2422 1.826385 AAGCCCCGATTGACTTTGAG 58.174 50.000 0.00 0.00 0.00 3.02
2352 2423 0.035056 AGCCCCGATTGACTTTGAGG 60.035 55.000 0.00 0.00 0.00 3.86
2353 2424 0.035439 GCCCCGATTGACTTTGAGGA 60.035 55.000 0.00 0.00 0.00 3.71
2354 2425 1.613255 GCCCCGATTGACTTTGAGGAA 60.613 52.381 0.00 0.00 0.00 3.36
2355 2426 2.084546 CCCCGATTGACTTTGAGGAAC 58.915 52.381 0.00 0.00 0.00 3.62
2356 2427 2.084546 CCCGATTGACTTTGAGGAACC 58.915 52.381 0.00 0.00 0.00 3.62
2357 2428 1.732259 CCGATTGACTTTGAGGAACCG 59.268 52.381 0.00 0.00 0.00 4.44
2358 2429 1.732259 CGATTGACTTTGAGGAACCGG 59.268 52.381 0.00 0.00 0.00 5.28
2359 2430 1.468914 GATTGACTTTGAGGAACCGGC 59.531 52.381 0.00 0.00 0.00 6.13
2360 2431 0.181587 TTGACTTTGAGGAACCGGCA 59.818 50.000 0.00 0.00 0.00 5.69
2361 2432 0.250295 TGACTTTGAGGAACCGGCAG 60.250 55.000 0.00 0.00 0.00 4.85
2362 2433 0.955919 GACTTTGAGGAACCGGCAGG 60.956 60.000 0.00 0.00 45.13 4.85
2363 2434 1.374947 CTTTGAGGAACCGGCAGGA 59.625 57.895 10.86 0.00 41.02 3.86
2364 2435 0.674895 CTTTGAGGAACCGGCAGGAG 60.675 60.000 10.86 0.00 41.02 3.69
2365 2436 2.748058 TTTGAGGAACCGGCAGGAGC 62.748 60.000 10.86 0.05 41.02 4.70
2366 2437 4.821589 GAGGAACCGGCAGGAGCG 62.822 72.222 10.86 0.00 43.41 5.03
2375 2446 3.368571 GCAGGAGCGCTGCCTTTT 61.369 61.111 26.33 3.51 41.58 2.27
2376 2447 2.873288 CAGGAGCGCTGCCTTTTC 59.127 61.111 26.33 3.31 32.12 2.29
2377 2448 1.968017 CAGGAGCGCTGCCTTTTCA 60.968 57.895 26.33 0.00 32.12 2.69
2378 2449 1.001641 AGGAGCGCTGCCTTTTCAT 60.002 52.632 26.33 1.34 29.44 2.57
2379 2450 0.610232 AGGAGCGCTGCCTTTTCATT 60.610 50.000 26.33 0.47 29.44 2.57
2380 2451 1.094785 GGAGCGCTGCCTTTTCATTA 58.905 50.000 18.48 0.00 0.00 1.90
2381 2452 1.472480 GGAGCGCTGCCTTTTCATTAA 59.528 47.619 18.48 0.00 0.00 1.40
2382 2453 2.478539 GGAGCGCTGCCTTTTCATTAAG 60.479 50.000 18.48 0.00 0.00 1.85
2383 2454 2.420022 GAGCGCTGCCTTTTCATTAAGA 59.580 45.455 18.48 0.00 0.00 2.10
2384 2455 2.162408 AGCGCTGCCTTTTCATTAAGAC 59.838 45.455 10.39 0.00 0.00 3.01
2385 2456 2.162408 GCGCTGCCTTTTCATTAAGACT 59.838 45.455 0.00 0.00 0.00 3.24
2386 2457 3.729163 GCGCTGCCTTTTCATTAAGACTC 60.729 47.826 0.00 0.00 0.00 3.36
2387 2458 3.436704 CGCTGCCTTTTCATTAAGACTCA 59.563 43.478 0.00 0.00 0.00 3.41
2388 2459 4.095483 CGCTGCCTTTTCATTAAGACTCAT 59.905 41.667 0.00 0.00 0.00 2.90
2389 2460 5.294306 CGCTGCCTTTTCATTAAGACTCATA 59.706 40.000 0.00 0.00 0.00 2.15
2390 2461 6.490534 GCTGCCTTTTCATTAAGACTCATAC 58.509 40.000 0.00 0.00 0.00 2.39
2391 2462 6.662414 TGCCTTTTCATTAAGACTCATACG 57.338 37.500 0.00 0.00 0.00 3.06
2392 2463 6.170506 TGCCTTTTCATTAAGACTCATACGT 58.829 36.000 0.00 0.00 0.00 3.57
2393 2464 7.324935 TGCCTTTTCATTAAGACTCATACGTA 58.675 34.615 0.00 0.00 0.00 3.57
2394 2465 7.277098 TGCCTTTTCATTAAGACTCATACGTAC 59.723 37.037 0.00 0.00 0.00 3.67
2395 2466 7.277098 GCCTTTTCATTAAGACTCATACGTACA 59.723 37.037 0.00 0.00 0.00 2.90
2396 2467 8.808529 CCTTTTCATTAAGACTCATACGTACAG 58.191 37.037 0.00 0.00 0.00 2.74
2397 2468 8.697846 TTTTCATTAAGACTCATACGTACAGG 57.302 34.615 0.00 0.00 0.00 4.00
2398 2469 5.828747 TCATTAAGACTCATACGTACAGGC 58.171 41.667 0.00 0.00 0.00 4.85
2399 2470 5.358725 TCATTAAGACTCATACGTACAGGCA 59.641 40.000 11.03 0.00 0.00 4.75
2400 2471 5.648178 TTAAGACTCATACGTACAGGCAA 57.352 39.130 11.03 0.00 0.00 4.52
2401 2472 4.737855 AAGACTCATACGTACAGGCAAT 57.262 40.909 11.03 0.00 0.00 3.56
2402 2473 4.308899 AGACTCATACGTACAGGCAATC 57.691 45.455 11.03 0.00 0.00 2.67
2403 2474 3.699538 AGACTCATACGTACAGGCAATCA 59.300 43.478 11.03 0.00 0.00 2.57
2404 2475 4.159693 AGACTCATACGTACAGGCAATCAA 59.840 41.667 11.03 0.00 0.00 2.57
2405 2476 4.181578 ACTCATACGTACAGGCAATCAAC 58.818 43.478 0.00 0.00 0.00 3.18
2406 2477 4.180817 CTCATACGTACAGGCAATCAACA 58.819 43.478 0.00 0.00 0.00 3.33
2407 2478 4.765273 TCATACGTACAGGCAATCAACAT 58.235 39.130 0.00 0.00 0.00 2.71
2408 2479 5.182487 TCATACGTACAGGCAATCAACATT 58.818 37.500 0.00 0.00 0.00 2.71
2409 2480 3.829886 ACGTACAGGCAATCAACATTG 57.170 42.857 0.00 0.00 42.26 2.82
2428 2499 3.454719 TGCTTTGGGATCATCTTTCCA 57.545 42.857 0.00 0.00 34.77 3.53
2430 2501 4.355549 TGCTTTGGGATCATCTTTCCAAT 58.644 39.130 0.00 0.00 38.81 3.16
2431 2502 4.778958 TGCTTTGGGATCATCTTTCCAATT 59.221 37.500 0.00 0.00 38.81 2.32
2432 2503 5.105228 TGCTTTGGGATCATCTTTCCAATTC 60.105 40.000 0.00 0.00 38.81 2.17
2434 2505 4.606476 TGGGATCATCTTTCCAATTCCA 57.394 40.909 0.00 0.00 34.77 3.53
2435 2506 4.945411 TGGGATCATCTTTCCAATTCCAA 58.055 39.130 0.00 0.00 34.77 3.53
2437 2508 4.711355 GGGATCATCTTTCCAATTCCAACA 59.289 41.667 0.00 0.00 34.77 3.33
2438 2509 5.364735 GGGATCATCTTTCCAATTCCAACAT 59.635 40.000 0.00 0.00 34.77 2.71
2440 2511 5.920193 TCATCTTTCCAATTCCAACATCC 57.080 39.130 0.00 0.00 0.00 3.51
2441 2512 5.331906 TCATCTTTCCAATTCCAACATCCA 58.668 37.500 0.00 0.00 0.00 3.41
2443 2514 5.664294 TCTTTCCAATTCCAACATCCATG 57.336 39.130 0.00 0.00 0.00 3.66
2445 2516 1.750206 TCCAATTCCAACATCCATGCG 59.250 47.619 0.00 0.00 0.00 4.73
2446 2517 1.202440 CCAATTCCAACATCCATGCGG 60.202 52.381 0.00 0.00 0.00 5.69
2455 2526 3.656280 TCCATGCGGGAGGCCAAA 61.656 61.111 5.01 0.00 42.15 3.28
2456 2527 2.679642 CCATGCGGGAGGCCAAAA 60.680 61.111 5.01 0.00 42.61 2.44
2457 2528 2.713967 CCATGCGGGAGGCCAAAAG 61.714 63.158 5.01 0.00 42.61 2.27
2458 2529 3.070576 ATGCGGGAGGCCAAAAGC 61.071 61.111 5.01 5.86 42.61 3.51
2459 2530 3.884704 ATGCGGGAGGCCAAAAGCA 62.885 57.895 16.20 16.20 46.50 3.91
2460 2531 3.070576 GCGGGAGGCCAAAAGCAT 61.071 61.111 5.01 0.00 46.50 3.79
2461 2532 1.752694 GCGGGAGGCCAAAAGCATA 60.753 57.895 5.01 0.00 46.50 3.14
2462 2533 1.728490 GCGGGAGGCCAAAAGCATAG 61.728 60.000 5.01 0.00 46.50 2.23
2463 2534 1.728490 CGGGAGGCCAAAAGCATAGC 61.728 60.000 5.01 0.00 46.50 2.97
2464 2535 0.684153 GGGAGGCCAAAAGCATAGCA 60.684 55.000 5.01 0.00 46.50 3.49
2465 2536 0.743097 GGAGGCCAAAAGCATAGCAG 59.257 55.000 5.01 0.00 46.50 4.24
2466 2537 1.683011 GGAGGCCAAAAGCATAGCAGA 60.683 52.381 5.01 0.00 46.50 4.26
2467 2538 2.094675 GAGGCCAAAAGCATAGCAGAA 58.905 47.619 5.01 0.00 46.50 3.02
2468 2539 2.692041 GAGGCCAAAAGCATAGCAGAAT 59.308 45.455 5.01 0.00 46.50 2.40
2469 2540 3.102204 AGGCCAAAAGCATAGCAGAATT 58.898 40.909 5.01 0.00 46.50 2.17
2470 2541 3.118884 AGGCCAAAAGCATAGCAGAATTG 60.119 43.478 5.01 0.00 46.50 2.32
2471 2542 3.368739 GGCCAAAAGCATAGCAGAATTGT 60.369 43.478 0.00 0.00 46.50 2.71
2472 2543 3.615496 GCCAAAAGCATAGCAGAATTGTG 59.385 43.478 0.00 0.00 42.97 3.33
2473 2544 4.178540 CCAAAAGCATAGCAGAATTGTGG 58.821 43.478 4.57 0.00 0.00 4.17
2474 2545 3.515330 AAAGCATAGCAGAATTGTGGC 57.485 42.857 4.57 0.00 0.00 5.01
2475 2546 2.431954 AGCATAGCAGAATTGTGGCT 57.568 45.000 4.57 1.66 41.51 4.75
2476 2547 3.565764 AGCATAGCAGAATTGTGGCTA 57.434 42.857 4.57 6.91 43.55 3.93
2478 2549 4.467769 AGCATAGCAGAATTGTGGCTATT 58.532 39.130 13.25 2.98 45.81 1.73
2479 2550 5.624159 AGCATAGCAGAATTGTGGCTATTA 58.376 37.500 13.25 0.00 45.81 0.98
2480 2551 6.064060 AGCATAGCAGAATTGTGGCTATTAA 58.936 36.000 13.25 0.00 45.81 1.40
2481 2552 6.718454 AGCATAGCAGAATTGTGGCTATTAAT 59.282 34.615 13.25 0.00 45.81 1.40
2482 2553 7.025963 GCATAGCAGAATTGTGGCTATTAATC 58.974 38.462 13.25 4.60 45.81 1.75
2483 2554 7.308770 GCATAGCAGAATTGTGGCTATTAATCA 60.309 37.037 13.25 0.00 45.81 2.57
2484 2555 8.570488 CATAGCAGAATTGTGGCTATTAATCAA 58.430 33.333 13.25 0.00 45.81 2.57
2485 2556 7.035840 AGCAGAATTGTGGCTATTAATCAAG 57.964 36.000 4.57 0.00 35.82 3.02
2486 2557 6.604795 AGCAGAATTGTGGCTATTAATCAAGT 59.395 34.615 4.57 0.00 35.82 3.16
2487 2558 6.914757 GCAGAATTGTGGCTATTAATCAAGTC 59.085 38.462 4.57 6.29 34.70 3.01
2488 2559 7.415541 GCAGAATTGTGGCTATTAATCAAGTCA 60.416 37.037 13.41 3.50 36.18 3.41
2531 2602 3.861840 TGAATCATGACCCTCGTTCTTC 58.138 45.455 0.00 0.00 0.00 2.87
2539 2611 2.996621 GACCCTCGTTCTTCTCAATGTG 59.003 50.000 0.00 0.00 0.00 3.21
2544 2616 1.135859 CGTTCTTCTCAATGTGCAGCC 60.136 52.381 0.00 0.00 0.00 4.85
2642 2714 1.279271 GTGGGCAGGTCAGTGTCTTAT 59.721 52.381 0.00 0.00 0.00 1.73
2643 2715 2.500098 GTGGGCAGGTCAGTGTCTTATA 59.500 50.000 0.00 0.00 0.00 0.98
2700 2772 3.005050 ACTCATTGTTCAGTGGCAATGTG 59.995 43.478 25.81 25.20 46.97 3.21
2817 2889 7.605691 AGAGATCAAGGTTTGTCACAAAGATAG 59.394 37.037 2.26 0.00 0.00 2.08
2818 2890 7.227156 AGATCAAGGTTTGTCACAAAGATAGT 58.773 34.615 2.26 0.00 0.00 2.12
2820 2892 9.167311 GATCAAGGTTTGTCACAAAGATAGTAT 57.833 33.333 2.26 0.00 0.00 2.12
2821 2893 8.547967 TCAAGGTTTGTCACAAAGATAGTATC 57.452 34.615 2.26 1.55 0.00 2.24
2822 2894 7.606456 TCAAGGTTTGTCACAAAGATAGTATCC 59.394 37.037 2.26 0.00 0.00 2.59
2823 2895 7.016153 AGGTTTGTCACAAAGATAGTATCCA 57.984 36.000 2.26 0.00 0.00 3.41
2824 2896 7.633789 AGGTTTGTCACAAAGATAGTATCCAT 58.366 34.615 2.26 0.00 0.00 3.41
2825 2897 7.770897 AGGTTTGTCACAAAGATAGTATCCATC 59.229 37.037 2.26 0.00 0.00 3.51
2826 2898 7.770897 GGTTTGTCACAAAGATAGTATCCATCT 59.229 37.037 2.26 0.00 34.15 2.90
2827 2899 9.167311 GTTTGTCACAAAGATAGTATCCATCTT 57.833 33.333 2.26 0.00 43.06 2.40
2834 2906 7.984050 ACAAAGATAGTATCCATCTTCACACTG 59.016 37.037 6.53 0.00 40.92 3.66
2842 2914 2.233271 CATCTTCACACTGGTGGCTTT 58.767 47.619 5.70 0.00 45.32 3.51
2845 2917 4.098914 TCTTCACACTGGTGGCTTTTAT 57.901 40.909 5.70 0.00 45.32 1.40
2847 2919 3.500448 TCACACTGGTGGCTTTTATCA 57.500 42.857 5.70 0.00 45.32 2.15
2850 2922 3.317711 CACACTGGTGGCTTTTATCAACA 59.682 43.478 5.70 0.00 41.45 3.33
2851 2923 3.317993 ACACTGGTGGCTTTTATCAACAC 59.682 43.478 5.70 0.00 34.19 3.32
2852 2924 3.569701 CACTGGTGGCTTTTATCAACACT 59.430 43.478 0.00 0.00 32.88 3.55
2853 2925 3.569701 ACTGGTGGCTTTTATCAACACTG 59.430 43.478 0.00 0.00 32.88 3.66
2854 2926 3.561143 TGGTGGCTTTTATCAACACTGT 58.439 40.909 0.00 0.00 32.88 3.55
2855 2927 3.957497 TGGTGGCTTTTATCAACACTGTT 59.043 39.130 0.00 0.00 32.88 3.16
2856 2928 4.202101 TGGTGGCTTTTATCAACACTGTTG 60.202 41.667 14.79 14.79 32.88 3.33
2857 2929 3.735746 GTGGCTTTTATCAACACTGTTGC 59.264 43.478 15.94 3.71 0.00 4.17
2858 2930 3.636300 TGGCTTTTATCAACACTGTTGCT 59.364 39.130 15.94 9.87 0.00 3.91
2859 2931 4.099266 TGGCTTTTATCAACACTGTTGCTT 59.901 37.500 15.94 9.10 0.00 3.91
2860 2932 4.445385 GGCTTTTATCAACACTGTTGCTTG 59.555 41.667 15.94 5.34 0.00 4.01
2861 2933 5.280945 GCTTTTATCAACACTGTTGCTTGA 58.719 37.500 15.94 0.69 31.59 3.02
2862 2934 5.748152 GCTTTTATCAACACTGTTGCTTGAA 59.252 36.000 15.94 7.23 31.14 2.69
2863 2935 6.255453 GCTTTTATCAACACTGTTGCTTGAAA 59.745 34.615 15.94 12.92 31.14 2.69
2866 2938 8.715191 TTTATCAACACTGTTGCTTGAAAAAT 57.285 26.923 15.94 5.60 31.14 1.82
2867 2939 8.715191 TTATCAACACTGTTGCTTGAAAAATT 57.285 26.923 15.94 0.00 31.14 1.82
2868 2940 6.406093 TCAACACTGTTGCTTGAAAAATTG 57.594 33.333 15.94 0.00 0.00 2.32
2869 2941 6.162079 TCAACACTGTTGCTTGAAAAATTGA 58.838 32.000 15.94 0.00 0.00 2.57
2870 2942 6.090628 TCAACACTGTTGCTTGAAAAATTGAC 59.909 34.615 15.94 0.00 0.00 3.18
2871 2943 4.869861 ACACTGTTGCTTGAAAAATTGACC 59.130 37.500 0.00 0.00 0.00 4.02
2872 2944 5.111293 CACTGTTGCTTGAAAAATTGACCT 58.889 37.500 0.00 0.00 0.00 3.85
2873 2945 5.232838 CACTGTTGCTTGAAAAATTGACCTC 59.767 40.000 0.00 0.00 0.00 3.85
2874 2946 5.127682 ACTGTTGCTTGAAAAATTGACCTCT 59.872 36.000 0.00 0.00 0.00 3.69
2875 2947 5.350633 TGTTGCTTGAAAAATTGACCTCTG 58.649 37.500 0.00 0.00 0.00 3.35
2876 2948 3.981211 TGCTTGAAAAATTGACCTCTGC 58.019 40.909 0.00 0.00 0.00 4.26
2877 2949 3.638160 TGCTTGAAAAATTGACCTCTGCT 59.362 39.130 0.00 0.00 0.00 4.24
2879 2951 4.553323 CTTGAAAAATTGACCTCTGCTGG 58.447 43.478 0.00 0.00 0.00 4.85
2882 2954 2.226962 AAATTGACCTCTGCTGGCAT 57.773 45.000 0.00 0.00 0.00 4.40
2959 3059 4.736896 GGGCTGTGGGACGTCGTC 62.737 72.222 17.16 17.16 0.00 4.20
2960 3060 3.681835 GGCTGTGGGACGTCGTCT 61.682 66.667 23.69 0.00 32.47 4.18
2978 3078 3.460103 GTCTCCAACGAGGTAAACACAA 58.540 45.455 0.00 0.00 39.02 3.33
2980 3080 2.203401 TCCAACGAGGTAAACACAACG 58.797 47.619 0.00 0.00 39.02 4.10
2990 3090 3.120304 GGTAAACACAACGCTCATCCTTC 60.120 47.826 0.00 0.00 0.00 3.46
2991 3091 1.523758 AACACAACGCTCATCCTTCC 58.476 50.000 0.00 0.00 0.00 3.46
2993 3093 1.003580 ACACAACGCTCATCCTTCCAT 59.996 47.619 0.00 0.00 0.00 3.41
3050 3151 2.680339 GTTCTAAGATGACTTGCCCTGC 59.320 50.000 0.00 0.00 37.53 4.85
3295 3414 1.288350 GCAATGTGTTGTGCAAGCAA 58.712 45.000 0.00 0.00 40.58 3.91
3311 3430 2.771089 AGCAATGTGTCTGATGACGTT 58.229 42.857 0.00 0.00 45.70 3.99
3353 3472 2.561478 TGCTTCACTCCAGTTTACCC 57.439 50.000 0.00 0.00 0.00 3.69
3400 3519 6.492007 TCTCAGCTGTTCTCATTTCAAATC 57.508 37.500 14.67 0.00 0.00 2.17
3406 3531 6.921857 AGCTGTTCTCATTTCAAATCTTTGTG 59.078 34.615 2.82 0.00 39.18 3.33
3422 3547 0.032815 TGTGAATGTGCGTCTCCGAA 59.967 50.000 0.00 0.00 35.63 4.30
3429 3554 4.415332 GCGTCTCCGAACAGGCGA 62.415 66.667 7.11 0.00 44.57 5.54
3508 3633 9.626045 GAAAATATTAAAAGGATCCTAATGCCG 57.374 33.333 16.55 0.00 0.00 5.69
3610 3750 5.601662 TCAGGTTTCTGTTAGAAGTCTGTG 58.398 41.667 15.80 7.25 41.59 3.66
3692 3835 6.006275 AGTGCTATGATACCCTGATTTTGT 57.994 37.500 0.00 0.00 0.00 2.83
3806 3950 1.906574 TGTCTACTCCATCAACACCCC 59.093 52.381 0.00 0.00 0.00 4.95
3813 3957 1.284785 TCCATCAACACCCCTGAATCC 59.715 52.381 0.00 0.00 0.00 3.01
3822 3966 2.440627 CACCCCTGAATCCTGATGATGA 59.559 50.000 0.00 0.00 32.68 2.92
3943 4093 6.059484 ACAGTTCAAAGAAGATTAAACGGGA 58.941 36.000 0.00 0.00 0.00 5.14
3944 4094 6.017357 ACAGTTCAAAGAAGATTAAACGGGAC 60.017 38.462 0.00 0.00 0.00 4.46
3945 4095 6.017440 CAGTTCAAAGAAGATTAAACGGGACA 60.017 38.462 0.00 0.00 0.00 4.02
3946 4096 6.204882 AGTTCAAAGAAGATTAAACGGGACAG 59.795 38.462 0.00 0.00 0.00 3.51
3947 4097 5.860611 TCAAAGAAGATTAAACGGGACAGA 58.139 37.500 0.00 0.00 0.00 3.41
3949 4099 6.940298 TCAAAGAAGATTAAACGGGACAGAAT 59.060 34.615 0.00 0.00 0.00 2.40
3951 4101 7.761038 AAGAAGATTAAACGGGACAGAATTT 57.239 32.000 0.00 0.00 0.00 1.82
3953 4103 7.817641 AGAAGATTAAACGGGACAGAATTTTC 58.182 34.615 0.00 0.00 0.00 2.29
3995 4146 7.886338 ACAGTTCAAAGAAGATTAAATGGGAC 58.114 34.615 0.00 0.00 0.00 4.46
4077 4228 9.730705 AGAGTGCAATATGCTATGTTGTATTAT 57.269 29.630 3.78 0.00 45.31 1.28
4104 4255 3.055094 TCTGCCCACCTTTCTTATGAGTC 60.055 47.826 0.00 0.00 0.00 3.36
4156 4307 6.727231 TGGTAAATACAGGAACTACTGGAAGA 59.273 38.462 0.00 0.00 42.75 2.87
4177 4328 7.066284 GGAAGACTGCAATCTGTTATGTTGTAT 59.934 37.037 0.00 0.00 0.00 2.29
4195 4346 3.521531 TGTATTATCTTCACTGCCCACCA 59.478 43.478 0.00 0.00 0.00 4.17
4202 4353 1.909700 TCACTGCCCACCATTCTTTC 58.090 50.000 0.00 0.00 0.00 2.62
4208 4359 3.686016 TGCCCACCATTCTTTCTAAGTC 58.314 45.455 0.00 0.00 0.00 3.01
4234 4385 7.023575 CCATCAAACTTCAAAAGGAGTAATCG 58.976 38.462 0.00 0.00 0.00 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.143155 GGGATAACATGGTCATTTAATAACCTT 57.857 33.333 0.00 0.00 34.05 3.50
1 2 8.511126 AGGGATAACATGGTCATTTAATAACCT 58.489 33.333 0.00 0.00 34.05 3.50
2 3 8.706322 AGGGATAACATGGTCATTTAATAACC 57.294 34.615 0.00 0.00 0.00 2.85
9 10 9.166222 TGTATACTAGGGATAACATGGTCATTT 57.834 33.333 4.17 0.00 0.00 2.32
10 11 8.736097 TGTATACTAGGGATAACATGGTCATT 57.264 34.615 4.17 0.00 0.00 2.57
11 12 8.177456 TCTGTATACTAGGGATAACATGGTCAT 58.823 37.037 4.17 0.00 0.00 3.06
12 13 7.532199 TCTGTATACTAGGGATAACATGGTCA 58.468 38.462 4.17 0.00 0.00 4.02
13 14 8.418597 TTCTGTATACTAGGGATAACATGGTC 57.581 38.462 4.17 0.00 0.00 4.02
14 15 8.792830 TTTCTGTATACTAGGGATAACATGGT 57.207 34.615 4.17 0.00 0.00 3.55
23 24 9.895138 GGTTGTTATTTTTCTGTATACTAGGGA 57.105 33.333 4.17 0.00 0.00 4.20
24 25 9.675464 TGGTTGTTATTTTTCTGTATACTAGGG 57.325 33.333 4.17 0.00 0.00 3.53
33 34 9.320352 GGTATTGTTTGGTTGTTATTTTTCTGT 57.680 29.630 0.00 0.00 0.00 3.41
34 35 9.319143 TGGTATTGTTTGGTTGTTATTTTTCTG 57.681 29.630 0.00 0.00 0.00 3.02
37 38 9.061435 CCATGGTATTGTTTGGTTGTTATTTTT 57.939 29.630 2.57 0.00 0.00 1.94
38 39 7.663493 CCCATGGTATTGTTTGGTTGTTATTTT 59.337 33.333 11.73 0.00 0.00 1.82
39 40 7.164803 CCCATGGTATTGTTTGGTTGTTATTT 58.835 34.615 11.73 0.00 0.00 1.40
40 41 6.296145 CCCCATGGTATTGTTTGGTTGTTATT 60.296 38.462 11.73 0.00 0.00 1.40
41 42 5.188751 CCCCATGGTATTGTTTGGTTGTTAT 59.811 40.000 11.73 0.00 0.00 1.89
42 43 4.528596 CCCCATGGTATTGTTTGGTTGTTA 59.471 41.667 11.73 0.00 0.00 2.41
43 44 3.326297 CCCCATGGTATTGTTTGGTTGTT 59.674 43.478 11.73 0.00 0.00 2.83
44 45 2.903135 CCCCATGGTATTGTTTGGTTGT 59.097 45.455 11.73 0.00 0.00 3.32
45 46 2.354604 GCCCCATGGTATTGTTTGGTTG 60.355 50.000 11.73 0.00 0.00 3.77
46 47 1.905894 GCCCCATGGTATTGTTTGGTT 59.094 47.619 11.73 0.00 0.00 3.67
47 48 1.567357 GCCCCATGGTATTGTTTGGT 58.433 50.000 11.73 0.00 0.00 3.67
48 49 0.459489 CGCCCCATGGTATTGTTTGG 59.541 55.000 11.73 2.83 0.00 3.28
49 50 0.459489 CCGCCCCATGGTATTGTTTG 59.541 55.000 11.73 0.00 0.00 2.93
50 51 1.326951 GCCGCCCCATGGTATTGTTT 61.327 55.000 11.73 0.00 0.00 2.83
51 52 1.756561 GCCGCCCCATGGTATTGTT 60.757 57.895 11.73 0.00 0.00 2.83
52 53 2.123897 GCCGCCCCATGGTATTGT 60.124 61.111 11.73 0.00 0.00 2.71
53 54 3.286751 CGCCGCCCCATGGTATTG 61.287 66.667 11.73 0.00 0.00 1.90
54 55 3.476031 CTCGCCGCCCCATGGTATT 62.476 63.158 11.73 0.00 0.00 1.89
55 56 3.941188 CTCGCCGCCCCATGGTAT 61.941 66.667 11.73 0.00 0.00 2.73
65 66 3.869272 CACTCATTGCCTCGCCGC 61.869 66.667 0.00 0.00 0.00 6.53
66 67 3.869272 GCACTCATTGCCTCGCCG 61.869 66.667 0.00 0.00 46.63 6.46
74 75 1.318158 GCCCCTTCCTGCACTCATTG 61.318 60.000 0.00 0.00 0.00 2.82
75 76 1.000396 GCCCCTTCCTGCACTCATT 60.000 57.895 0.00 0.00 0.00 2.57
76 77 1.578215 ATGCCCCTTCCTGCACTCAT 61.578 55.000 0.00 0.00 40.88 2.90
77 78 1.792757 AATGCCCCTTCCTGCACTCA 61.793 55.000 0.00 0.00 40.88 3.41
78 79 1.000396 AATGCCCCTTCCTGCACTC 60.000 57.895 0.00 0.00 40.88 3.51
79 80 1.304713 CAATGCCCCTTCCTGCACT 60.305 57.895 0.00 0.00 40.88 4.40
80 81 1.187567 AACAATGCCCCTTCCTGCAC 61.188 55.000 0.00 0.00 40.88 4.57
81 82 1.155859 AACAATGCCCCTTCCTGCA 59.844 52.632 0.00 0.00 42.52 4.41
82 83 1.593265 CAACAATGCCCCTTCCTGC 59.407 57.895 0.00 0.00 0.00 4.85
83 84 0.251742 TCCAACAATGCCCCTTCCTG 60.252 55.000 0.00 0.00 0.00 3.86
84 85 0.486879 TTCCAACAATGCCCCTTCCT 59.513 50.000 0.00 0.00 0.00 3.36
85 86 1.347062 TTTCCAACAATGCCCCTTCC 58.653 50.000 0.00 0.00 0.00 3.46
86 87 2.368548 ACTTTTCCAACAATGCCCCTTC 59.631 45.455 0.00 0.00 0.00 3.46
87 88 2.368548 GACTTTTCCAACAATGCCCCTT 59.631 45.455 0.00 0.00 0.00 3.95
88 89 1.970640 GACTTTTCCAACAATGCCCCT 59.029 47.619 0.00 0.00 0.00 4.79
89 90 1.001974 GGACTTTTCCAACAATGCCCC 59.998 52.381 0.00 0.00 42.30 5.80
90 91 1.001974 GGGACTTTTCCAACAATGCCC 59.998 52.381 0.00 0.00 44.98 5.36
91 92 1.691434 TGGGACTTTTCCAACAATGCC 59.309 47.619 0.00 0.00 44.98 4.40
92 93 3.467374 TTGGGACTTTTCCAACAATGC 57.533 42.857 0.00 0.00 44.98 3.56
141 142 9.783256 GACTAAAAGTTGCTTTTTGAGACTAAA 57.217 29.630 17.61 0.00 40.23 1.85
142 143 8.403236 GGACTAAAAGTTGCTTTTTGAGACTAA 58.597 33.333 17.61 0.00 40.23 2.24
143 144 7.012989 GGGACTAAAAGTTGCTTTTTGAGACTA 59.987 37.037 17.61 0.00 40.23 2.59
144 145 6.183360 GGGACTAAAAGTTGCTTTTTGAGACT 60.183 38.462 17.61 1.50 40.23 3.24
145 146 5.977725 GGGACTAAAAGTTGCTTTTTGAGAC 59.022 40.000 17.61 9.13 40.23 3.36
146 147 5.891551 AGGGACTAAAAGTTGCTTTTTGAGA 59.108 36.000 17.61 0.53 40.23 3.27
147 148 6.149129 AGGGACTAAAAGTTGCTTTTTGAG 57.851 37.500 17.61 10.79 40.23 3.02
163 164 5.681494 ACATGAGGGACTATTAGGGACTA 57.319 43.478 0.00 0.00 41.55 2.59
164 165 4.561254 ACATGAGGGACTATTAGGGACT 57.439 45.455 0.00 0.00 41.55 3.85
165 166 5.368989 CAAACATGAGGGACTATTAGGGAC 58.631 45.833 0.00 0.00 41.55 4.46
166 167 4.412199 CCAAACATGAGGGACTATTAGGGA 59.588 45.833 0.00 0.00 41.55 4.20
167 168 4.166144 ACCAAACATGAGGGACTATTAGGG 59.834 45.833 0.00 0.00 41.55 3.53
168 169 5.373812 ACCAAACATGAGGGACTATTAGG 57.626 43.478 0.00 0.00 41.55 2.69
169 170 8.801882 TTTAACCAAACATGAGGGACTATTAG 57.198 34.615 0.00 0.00 41.55 1.73
170 171 9.589461 TTTTTAACCAAACATGAGGGACTATTA 57.411 29.630 0.00 0.00 41.55 0.98
171 172 8.485578 TTTTTAACCAAACATGAGGGACTATT 57.514 30.769 0.00 0.00 41.55 1.73
172 173 7.728532 ACTTTTTAACCAAACATGAGGGACTAT 59.271 33.333 0.00 0.00 41.55 2.12
173 174 7.064229 ACTTTTTAACCAAACATGAGGGACTA 58.936 34.615 0.00 0.00 41.55 2.59
175 176 6.040504 AGACTTTTTAACCAAACATGAGGGAC 59.959 38.462 0.00 0.00 0.00 4.46
176 177 6.133356 AGACTTTTTAACCAAACATGAGGGA 58.867 36.000 0.00 0.00 0.00 4.20
177 178 6.265422 AGAGACTTTTTAACCAAACATGAGGG 59.735 38.462 0.00 0.00 0.00 4.30
178 179 7.277174 AGAGACTTTTTAACCAAACATGAGG 57.723 36.000 0.00 0.35 0.00 3.86
179 180 9.884465 CTTAGAGACTTTTTAACCAAACATGAG 57.116 33.333 0.00 0.00 0.00 2.90
180 181 9.621629 TCTTAGAGACTTTTTAACCAAACATGA 57.378 29.630 0.00 0.00 0.00 3.07
181 182 9.884465 CTCTTAGAGACTTTTTAACCAAACATG 57.116 33.333 2.53 0.00 0.00 3.21
182 183 9.067986 CCTCTTAGAGACTTTTTAACCAAACAT 57.932 33.333 11.32 0.00 0.00 2.71
183 184 8.269317 TCCTCTTAGAGACTTTTTAACCAAACA 58.731 33.333 11.32 0.00 0.00 2.83
184 185 8.672823 TCCTCTTAGAGACTTTTTAACCAAAC 57.327 34.615 11.32 0.00 0.00 2.93
185 186 9.117183 GTTCCTCTTAGAGACTTTTTAACCAAA 57.883 33.333 11.32 0.00 0.00 3.28
186 187 8.491958 AGTTCCTCTTAGAGACTTTTTAACCAA 58.508 33.333 11.32 0.00 0.00 3.67
187 188 8.030913 AGTTCCTCTTAGAGACTTTTTAACCA 57.969 34.615 11.32 0.00 0.00 3.67
188 189 8.905660 AAGTTCCTCTTAGAGACTTTTTAACC 57.094 34.615 11.32 0.00 34.23 2.85
192 193 9.688091 AGAAAAAGTTCCTCTTAGAGACTTTTT 57.312 29.630 31.82 31.82 43.82 1.94
194 195 9.990360 CTAGAAAAAGTTCCTCTTAGAGACTTT 57.010 33.333 17.79 17.79 35.02 2.66
195 196 9.150028 ACTAGAAAAAGTTCCTCTTAGAGACTT 57.850 33.333 11.32 10.31 35.02 3.01
196 197 8.715190 ACTAGAAAAAGTTCCTCTTAGAGACT 57.285 34.615 11.32 4.29 35.02 3.24
197 198 8.030692 GGACTAGAAAAAGTTCCTCTTAGAGAC 58.969 40.741 11.32 1.78 35.02 3.36
198 199 7.178805 GGGACTAGAAAAAGTTCCTCTTAGAGA 59.821 40.741 11.32 0.00 41.41 3.10
199 200 7.324935 GGGACTAGAAAAAGTTCCTCTTAGAG 58.675 42.308 1.56 1.56 41.41 2.43
200 201 7.242322 GGGACTAGAAAAAGTTCCTCTTAGA 57.758 40.000 0.00 0.00 41.41 2.10
207 208 5.221783 TGGTGTAGGGACTAGAAAAAGTTCC 60.222 44.000 0.00 0.00 44.14 3.62
208 209 5.861727 TGGTGTAGGGACTAGAAAAAGTTC 58.138 41.667 0.00 0.00 44.14 3.01
209 210 5.899631 TGGTGTAGGGACTAGAAAAAGTT 57.100 39.130 0.00 0.00 44.14 2.66
210 211 5.899631 TTGGTGTAGGGACTAGAAAAAGT 57.100 39.130 0.00 0.00 44.14 2.66
211 212 7.284716 ACTTTTTGGTGTAGGGACTAGAAAAAG 59.715 37.037 0.00 0.00 44.14 2.27
212 213 7.120716 ACTTTTTGGTGTAGGGACTAGAAAAA 58.879 34.615 0.00 0.00 44.14 1.94
213 214 6.665695 ACTTTTTGGTGTAGGGACTAGAAAA 58.334 36.000 0.00 0.00 44.14 2.29
214 215 6.256643 ACTTTTTGGTGTAGGGACTAGAAA 57.743 37.500 0.00 0.00 44.14 2.52
215 216 5.221783 GGACTTTTTGGTGTAGGGACTAGAA 60.222 44.000 0.00 0.00 44.14 2.10
216 217 4.285260 GGACTTTTTGGTGTAGGGACTAGA 59.715 45.833 0.00 0.00 44.14 2.43
217 218 4.565028 GGGACTTTTTGGTGTAGGGACTAG 60.565 50.000 0.00 0.00 44.14 2.57
218 219 3.328637 GGGACTTTTTGGTGTAGGGACTA 59.671 47.826 0.00 0.00 41.75 2.59
219 220 2.107726 GGGACTTTTTGGTGTAGGGACT 59.892 50.000 0.00 0.00 46.37 3.85
220 221 2.107726 AGGGACTTTTTGGTGTAGGGAC 59.892 50.000 0.00 0.00 27.25 4.46
221 222 2.107552 CAGGGACTTTTTGGTGTAGGGA 59.892 50.000 0.00 0.00 34.60 4.20
222 223 2.514803 CAGGGACTTTTTGGTGTAGGG 58.485 52.381 0.00 0.00 34.60 3.53
223 224 2.107552 TCCAGGGACTTTTTGGTGTAGG 59.892 50.000 0.00 0.00 34.60 3.18
224 225 3.502123 TCCAGGGACTTTTTGGTGTAG 57.498 47.619 0.00 0.00 34.60 2.74
225 226 3.955524 TTCCAGGGACTTTTTGGTGTA 57.044 42.857 0.00 0.00 34.60 2.90
226 227 2.764010 GTTTCCAGGGACTTTTTGGTGT 59.236 45.455 0.00 0.00 34.60 4.16
227 228 2.763448 TGTTTCCAGGGACTTTTTGGTG 59.237 45.455 0.00 0.00 34.60 4.17
228 229 3.108847 TGTTTCCAGGGACTTTTTGGT 57.891 42.857 0.00 0.00 34.60 3.67
229 230 4.188462 GTTTGTTTCCAGGGACTTTTTGG 58.812 43.478 0.00 0.00 34.60 3.28
230 231 4.629634 GTGTTTGTTTCCAGGGACTTTTTG 59.370 41.667 0.00 0.00 34.60 2.44
231 232 4.323180 GGTGTTTGTTTCCAGGGACTTTTT 60.323 41.667 0.00 0.00 34.60 1.94
232 233 3.196901 GGTGTTTGTTTCCAGGGACTTTT 59.803 43.478 0.00 0.00 34.60 2.27
233 234 2.764010 GGTGTTTGTTTCCAGGGACTTT 59.236 45.455 0.00 0.00 34.60 2.66
234 235 2.384828 GGTGTTTGTTTCCAGGGACTT 58.615 47.619 0.00 0.00 34.60 3.01
235 236 1.411074 GGGTGTTTGTTTCCAGGGACT 60.411 52.381 0.00 0.00 43.88 3.85
236 237 1.037493 GGGTGTTTGTTTCCAGGGAC 58.963 55.000 0.00 0.00 0.00 4.46
237 238 0.930726 AGGGTGTTTGTTTCCAGGGA 59.069 50.000 0.00 0.00 0.00 4.20
238 239 1.133482 AGAGGGTGTTTGTTTCCAGGG 60.133 52.381 0.00 0.00 0.00 4.45
239 240 1.956477 CAGAGGGTGTTTGTTTCCAGG 59.044 52.381 0.00 0.00 0.00 4.45
240 241 2.880890 CTCAGAGGGTGTTTGTTTCCAG 59.119 50.000 0.00 0.00 0.00 3.86
241 242 2.241176 ACTCAGAGGGTGTTTGTTTCCA 59.759 45.455 1.53 0.00 0.00 3.53
242 243 2.932261 ACTCAGAGGGTGTTTGTTTCC 58.068 47.619 1.53 0.00 0.00 3.13
243 244 5.552178 AGATACTCAGAGGGTGTTTGTTTC 58.448 41.667 1.53 0.00 0.00 2.78
244 245 5.568620 AGATACTCAGAGGGTGTTTGTTT 57.431 39.130 1.53 0.00 0.00 2.83
245 246 5.071788 TGAAGATACTCAGAGGGTGTTTGTT 59.928 40.000 1.53 0.00 0.00 2.83
246 247 4.593206 TGAAGATACTCAGAGGGTGTTTGT 59.407 41.667 1.53 0.00 0.00 2.83
247 248 5.152623 TGAAGATACTCAGAGGGTGTTTG 57.847 43.478 1.53 0.00 0.00 2.93
248 249 5.544176 TCTTGAAGATACTCAGAGGGTGTTT 59.456 40.000 1.53 0.00 0.00 2.83
249 250 5.087323 TCTTGAAGATACTCAGAGGGTGTT 58.913 41.667 1.53 0.00 0.00 3.32
250 251 4.678256 TCTTGAAGATACTCAGAGGGTGT 58.322 43.478 1.53 0.00 0.00 4.16
251 252 4.952957 TCTCTTGAAGATACTCAGAGGGTG 59.047 45.833 1.53 0.00 0.00 4.61
252 253 4.953579 GTCTCTTGAAGATACTCAGAGGGT 59.046 45.833 1.53 0.00 36.11 4.34
253 254 5.067674 CAGTCTCTTGAAGATACTCAGAGGG 59.932 48.000 9.92 0.00 36.11 4.30
254 255 5.067674 CCAGTCTCTTGAAGATACTCAGAGG 59.932 48.000 9.92 5.59 36.11 3.69
255 256 5.067674 CCCAGTCTCTTGAAGATACTCAGAG 59.932 48.000 9.92 0.00 36.11 3.35
256 257 4.952957 CCCAGTCTCTTGAAGATACTCAGA 59.047 45.833 9.92 0.00 36.11 3.27
257 258 4.441356 GCCCAGTCTCTTGAAGATACTCAG 60.441 50.000 9.92 6.29 36.11 3.35
258 259 3.449018 GCCCAGTCTCTTGAAGATACTCA 59.551 47.826 9.92 0.00 36.11 3.41
259 260 3.181470 GGCCCAGTCTCTTGAAGATACTC 60.181 52.174 9.92 0.90 36.11 2.59
260 261 2.769095 GGCCCAGTCTCTTGAAGATACT 59.231 50.000 7.34 7.34 36.11 2.12
261 262 2.501723 TGGCCCAGTCTCTTGAAGATAC 59.498 50.000 0.00 2.81 36.11 2.24
262 263 2.768527 CTGGCCCAGTCTCTTGAAGATA 59.231 50.000 1.39 0.00 36.11 1.98
263 264 1.558756 CTGGCCCAGTCTCTTGAAGAT 59.441 52.381 1.39 0.00 36.11 2.40
264 265 0.979665 CTGGCCCAGTCTCTTGAAGA 59.020 55.000 1.39 0.00 0.00 2.87
265 266 0.035630 CCTGGCCCAGTCTCTTGAAG 60.036 60.000 10.47 0.00 0.00 3.02
266 267 0.768221 ACCTGGCCCAGTCTCTTGAA 60.768 55.000 10.47 0.00 0.00 2.69
267 268 1.152030 ACCTGGCCCAGTCTCTTGA 60.152 57.895 10.47 0.00 0.00 3.02
268 269 1.298014 GACCTGGCCCAGTCTCTTG 59.702 63.158 10.47 0.00 0.00 3.02
269 270 1.920835 GGACCTGGCCCAGTCTCTT 60.921 63.158 18.71 0.00 0.00 2.85
270 271 2.284995 GGACCTGGCCCAGTCTCT 60.285 66.667 18.71 0.00 0.00 3.10
271 272 2.607750 TGGACCTGGCCCAGTCTC 60.608 66.667 18.71 3.55 0.00 3.36
272 273 2.608988 CTGGACCTGGCCCAGTCT 60.609 66.667 19.92 0.00 44.66 3.24
276 277 1.974028 TTTATACTGGACCTGGCCCA 58.026 50.000 0.52 0.52 0.00 5.36
277 278 2.863809 CATTTATACTGGACCTGGCCC 58.136 52.381 0.00 0.00 0.00 5.80
278 279 2.230660 GCATTTATACTGGACCTGGCC 58.769 52.381 0.00 0.00 0.00 5.36
279 280 1.873591 CGCATTTATACTGGACCTGGC 59.126 52.381 3.15 0.00 0.00 4.85
280 281 3.393800 CTCGCATTTATACTGGACCTGG 58.606 50.000 3.15 0.00 0.00 4.45
281 282 2.802816 GCTCGCATTTATACTGGACCTG 59.197 50.000 0.00 0.00 0.00 4.00
282 283 2.434336 TGCTCGCATTTATACTGGACCT 59.566 45.455 0.00 0.00 0.00 3.85
283 284 2.544267 GTGCTCGCATTTATACTGGACC 59.456 50.000 0.00 0.00 0.00 4.46
284 285 2.544267 GGTGCTCGCATTTATACTGGAC 59.456 50.000 0.00 0.00 0.00 4.02
285 286 2.801699 CGGTGCTCGCATTTATACTGGA 60.802 50.000 0.00 0.00 0.00 3.86
286 287 1.526887 CGGTGCTCGCATTTATACTGG 59.473 52.381 0.00 0.00 0.00 4.00
287 288 1.526887 CCGGTGCTCGCATTTATACTG 59.473 52.381 0.00 0.00 37.59 2.74
288 289 1.411246 TCCGGTGCTCGCATTTATACT 59.589 47.619 0.00 0.00 37.59 2.12
289 290 1.860676 TCCGGTGCTCGCATTTATAC 58.139 50.000 0.00 0.00 37.59 1.47
290 291 2.159014 AGTTCCGGTGCTCGCATTTATA 60.159 45.455 0.00 0.00 37.59 0.98
291 292 1.014352 GTTCCGGTGCTCGCATTTAT 58.986 50.000 0.00 0.00 37.59 1.40
292 293 0.036765 AGTTCCGGTGCTCGCATTTA 60.037 50.000 0.00 0.00 37.59 1.40
293 294 0.889186 AAGTTCCGGTGCTCGCATTT 60.889 50.000 0.00 0.00 37.59 2.32
294 295 0.036765 TAAGTTCCGGTGCTCGCATT 60.037 50.000 0.00 0.00 37.59 3.56
295 296 0.036765 TTAAGTTCCGGTGCTCGCAT 60.037 50.000 0.00 0.00 37.59 4.73
296 297 0.249953 TTTAAGTTCCGGTGCTCGCA 60.250 50.000 0.00 0.00 37.59 5.10
297 298 0.165295 GTTTAAGTTCCGGTGCTCGC 59.835 55.000 0.00 0.00 37.59 5.03
298 299 0.794473 GGTTTAAGTTCCGGTGCTCG 59.206 55.000 0.00 0.00 38.88 5.03
299 300 1.162698 GGGTTTAAGTTCCGGTGCTC 58.837 55.000 0.00 0.00 0.00 4.26
300 301 0.769247 AGGGTTTAAGTTCCGGTGCT 59.231 50.000 0.00 0.00 0.00 4.40
301 302 0.879090 CAGGGTTTAAGTTCCGGTGC 59.121 55.000 0.00 0.00 0.00 5.01
302 303 2.554370 TCAGGGTTTAAGTTCCGGTG 57.446 50.000 0.00 0.00 0.00 4.94
303 304 2.640826 TCATCAGGGTTTAAGTTCCGGT 59.359 45.455 0.00 0.00 0.00 5.28
304 305 3.270877 CTCATCAGGGTTTAAGTTCCGG 58.729 50.000 0.00 0.00 0.00 5.14
305 306 2.678336 GCTCATCAGGGTTTAAGTTCCG 59.322 50.000 0.00 0.00 0.00 4.30
306 307 3.691609 CAGCTCATCAGGGTTTAAGTTCC 59.308 47.826 0.00 0.00 0.00 3.62
307 308 3.691609 CCAGCTCATCAGGGTTTAAGTTC 59.308 47.826 0.00 0.00 0.00 3.01
308 309 3.330701 TCCAGCTCATCAGGGTTTAAGTT 59.669 43.478 0.00 0.00 0.00 2.66
309 310 2.912956 TCCAGCTCATCAGGGTTTAAGT 59.087 45.455 0.00 0.00 0.00 2.24
310 311 3.634397 TCCAGCTCATCAGGGTTTAAG 57.366 47.619 0.00 0.00 0.00 1.85
311 312 5.369404 TGATATCCAGCTCATCAGGGTTTAA 59.631 40.000 0.00 0.00 0.00 1.52
312 313 4.907269 TGATATCCAGCTCATCAGGGTTTA 59.093 41.667 0.00 0.00 0.00 2.01
313 314 3.718434 TGATATCCAGCTCATCAGGGTTT 59.282 43.478 0.00 0.00 0.00 3.27
314 315 3.072184 GTGATATCCAGCTCATCAGGGTT 59.928 47.826 0.00 0.00 29.64 4.11
315 316 2.636893 GTGATATCCAGCTCATCAGGGT 59.363 50.000 0.00 0.00 29.64 4.34
316 317 2.905085 AGTGATATCCAGCTCATCAGGG 59.095 50.000 0.00 0.00 29.64 4.45
317 318 3.324268 ACAGTGATATCCAGCTCATCAGG 59.676 47.826 0.00 0.00 29.64 3.86
318 319 4.558178 GACAGTGATATCCAGCTCATCAG 58.442 47.826 0.00 0.00 29.64 2.90
319 320 3.323115 GGACAGTGATATCCAGCTCATCA 59.677 47.826 0.00 0.00 0.00 3.07
320 321 3.323115 TGGACAGTGATATCCAGCTCATC 59.677 47.826 0.00 0.00 0.00 2.92
321 322 3.070734 GTGGACAGTGATATCCAGCTCAT 59.929 47.826 0.00 0.00 32.30 2.90
322 323 2.432146 GTGGACAGTGATATCCAGCTCA 59.568 50.000 0.00 0.00 32.30 4.26
323 324 2.224161 GGTGGACAGTGATATCCAGCTC 60.224 54.545 18.43 2.27 44.57 4.09
324 325 1.765314 GGTGGACAGTGATATCCAGCT 59.235 52.381 18.43 0.00 44.57 4.24
325 326 2.246719 GGTGGACAGTGATATCCAGC 57.753 55.000 12.95 12.95 42.34 4.85
326 327 5.305386 TGATTAGGTGGACAGTGATATCCAG 59.695 44.000 0.00 0.00 32.30 3.86
327 328 5.215845 TGATTAGGTGGACAGTGATATCCA 58.784 41.667 0.00 0.00 0.00 3.41
328 329 5.808366 TGATTAGGTGGACAGTGATATCC 57.192 43.478 0.00 0.00 0.00 2.59
329 330 9.778741 TTAAATGATTAGGTGGACAGTGATATC 57.221 33.333 0.00 0.00 0.00 1.63
330 331 9.561069 GTTAAATGATTAGGTGGACAGTGATAT 57.439 33.333 0.00 0.00 0.00 1.63
331 332 8.768397 AGTTAAATGATTAGGTGGACAGTGATA 58.232 33.333 0.00 0.00 0.00 2.15
332 333 7.633789 AGTTAAATGATTAGGTGGACAGTGAT 58.366 34.615 0.00 0.00 0.00 3.06
333 334 7.016153 AGTTAAATGATTAGGTGGACAGTGA 57.984 36.000 0.00 0.00 0.00 3.41
334 335 7.822334 TGTAGTTAAATGATTAGGTGGACAGTG 59.178 37.037 0.00 0.00 0.00 3.66
335 336 7.913789 TGTAGTTAAATGATTAGGTGGACAGT 58.086 34.615 0.00 0.00 0.00 3.55
336 337 8.041323 ACTGTAGTTAAATGATTAGGTGGACAG 58.959 37.037 0.00 0.00 35.37 3.51
337 338 7.913789 ACTGTAGTTAAATGATTAGGTGGACA 58.086 34.615 0.00 0.00 0.00 4.02
338 339 8.788325 AACTGTAGTTAAATGATTAGGTGGAC 57.212 34.615 0.00 0.00 36.32 4.02
339 340 9.226606 CAAACTGTAGTTAAATGATTAGGTGGA 57.773 33.333 0.00 0.00 37.25 4.02
340 341 8.458843 CCAAACTGTAGTTAAATGATTAGGTGG 58.541 37.037 0.00 0.00 37.25 4.61
341 342 7.968405 GCCAAACTGTAGTTAAATGATTAGGTG 59.032 37.037 0.00 0.00 37.25 4.00
342 343 7.888546 AGCCAAACTGTAGTTAAATGATTAGGT 59.111 33.333 0.00 0.00 37.25 3.08
343 344 8.281212 AGCCAAACTGTAGTTAAATGATTAGG 57.719 34.615 0.00 0.00 37.25 2.69
344 345 8.116753 CGAGCCAAACTGTAGTTAAATGATTAG 58.883 37.037 0.00 0.00 37.25 1.73
345 346 7.413657 GCGAGCCAAACTGTAGTTAAATGATTA 60.414 37.037 0.00 0.00 37.25 1.75
346 347 6.622896 GCGAGCCAAACTGTAGTTAAATGATT 60.623 38.462 0.00 0.00 37.25 2.57
347 348 5.163754 GCGAGCCAAACTGTAGTTAAATGAT 60.164 40.000 0.00 0.00 37.25 2.45
348 349 4.153475 GCGAGCCAAACTGTAGTTAAATGA 59.847 41.667 0.00 0.00 37.25 2.57
349 350 4.083537 TGCGAGCCAAACTGTAGTTAAATG 60.084 41.667 0.00 0.00 37.25 2.32
350 351 4.069304 TGCGAGCCAAACTGTAGTTAAAT 58.931 39.130 0.00 0.00 37.25 1.40
351 352 3.468770 TGCGAGCCAAACTGTAGTTAAA 58.531 40.909 0.00 0.00 37.25 1.52
352 353 3.064207 CTGCGAGCCAAACTGTAGTTAA 58.936 45.455 0.00 0.00 37.25 2.01
353 354 2.683968 CTGCGAGCCAAACTGTAGTTA 58.316 47.619 0.00 0.00 37.25 2.24
354 355 1.512926 CTGCGAGCCAAACTGTAGTT 58.487 50.000 0.00 0.00 40.50 2.24
355 356 0.951040 GCTGCGAGCCAAACTGTAGT 60.951 55.000 0.00 0.00 34.48 2.73
356 357 0.950555 TGCTGCGAGCCAAACTGTAG 60.951 55.000 5.82 0.00 41.51 2.74
357 358 0.950555 CTGCTGCGAGCCAAACTGTA 60.951 55.000 5.82 0.00 41.51 2.74
358 359 2.203195 TGCTGCGAGCCAAACTGT 60.203 55.556 5.82 0.00 41.51 3.55
359 360 2.559840 CTGCTGCGAGCCAAACTG 59.440 61.111 5.82 0.00 41.51 3.16
360 361 2.670934 CCTGCTGCGAGCCAAACT 60.671 61.111 5.82 0.00 41.51 2.66
361 362 3.741476 CCCTGCTGCGAGCCAAAC 61.741 66.667 5.82 0.00 41.51 2.93
371 372 2.436292 GAGAGTGCTGCCCTGCTG 60.436 66.667 0.00 0.00 0.00 4.41
372 373 4.079850 CGAGAGTGCTGCCCTGCT 62.080 66.667 0.00 0.00 0.00 4.24
373 374 4.385405 ACGAGAGTGCTGCCCTGC 62.385 66.667 0.00 0.00 46.97 4.85
387 388 2.902705 AGAGCGCCCAATAATAACGA 57.097 45.000 2.29 0.00 0.00 3.85
388 389 3.121126 CGTTAGAGCGCCCAATAATAACG 60.121 47.826 2.29 10.83 38.35 3.18
390 391 3.805422 CACGTTAGAGCGCCCAATAATAA 59.195 43.478 2.29 0.00 34.88 1.40
439 443 3.788766 GATGGGCGACACGTGTGC 61.789 66.667 28.82 26.59 0.00 4.57
505 509 1.588139 GATTAGGTCGCGGACACGG 60.588 63.158 6.13 0.00 41.36 4.94
513 517 1.944676 CGCTCGTGGATTAGGTCGC 60.945 63.158 0.00 0.00 0.00 5.19
554 558 2.013483 CATGACTCGGCTCGATCGC 61.013 63.158 11.09 0.00 34.61 4.58
583 598 0.909610 TGGTTCTTCTCCTCCCGCAT 60.910 55.000 0.00 0.00 0.00 4.73
584 599 1.535444 TGGTTCTTCTCCTCCCGCA 60.535 57.895 0.00 0.00 0.00 5.69
586 601 1.215647 CGTGGTTCTTCTCCTCCCG 59.784 63.158 0.00 0.00 0.00 5.14
587 602 0.974383 TTCGTGGTTCTTCTCCTCCC 59.026 55.000 0.00 0.00 0.00 4.30
588 603 2.414806 GTTTCGTGGTTCTTCTCCTCC 58.585 52.381 0.00 0.00 0.00 4.30
590 605 1.766496 TGGTTTCGTGGTTCTTCTCCT 59.234 47.619 0.00 0.00 0.00 3.69
591 606 2.249844 TGGTTTCGTGGTTCTTCTCC 57.750 50.000 0.00 0.00 0.00 3.71
592 607 4.348656 GTTTTGGTTTCGTGGTTCTTCTC 58.651 43.478 0.00 0.00 0.00 2.87
593 608 3.129813 GGTTTTGGTTTCGTGGTTCTTCT 59.870 43.478 0.00 0.00 0.00 2.85
594 609 3.119424 TGGTTTTGGTTTCGTGGTTCTTC 60.119 43.478 0.00 0.00 0.00 2.87
595 610 2.826725 TGGTTTTGGTTTCGTGGTTCTT 59.173 40.909 0.00 0.00 0.00 2.52
600 615 2.263945 GTGTTGGTTTTGGTTTCGTGG 58.736 47.619 0.00 0.00 0.00 4.94
650 679 1.299773 CTTGGATCTCTCGCTCGCC 60.300 63.158 0.00 0.00 0.00 5.54
651 680 0.101399 TTCTTGGATCTCTCGCTCGC 59.899 55.000 0.00 0.00 0.00 5.03
652 681 2.568696 TTTCTTGGATCTCTCGCTCG 57.431 50.000 0.00 0.00 0.00 5.03
654 683 2.626840 GCTTTTCTTGGATCTCTCGCT 58.373 47.619 0.00 0.00 0.00 4.93
864 910 1.521423 CGGCGCTCGTAAATAAGGAAG 59.479 52.381 7.64 0.00 0.00 3.46
890 936 0.251787 AAGAACCAATGGTCCCAGGC 60.252 55.000 4.95 0.00 33.12 4.85
991 1037 1.227853 GGTGCCCCATGTATCGGTC 60.228 63.158 0.00 0.00 0.00 4.79
992 1038 2.915869 GGTGCCCCATGTATCGGT 59.084 61.111 0.00 0.00 0.00 4.69
995 1041 2.113139 CCCGGTGCCCCATGTATC 59.887 66.667 0.00 0.00 0.00 2.24
996 1042 3.498071 CCCCGGTGCCCCATGTAT 61.498 66.667 0.00 0.00 0.00 2.29
1011 1057 3.569200 GACAGGCTTGGTGTCCCCC 62.569 68.421 0.00 0.00 38.75 5.40
1481 1536 6.611381 CATCATCAGAAGTTTAAAAGCCGAA 58.389 36.000 0.00 0.00 0.00 4.30
1482 1537 5.391950 GCATCATCAGAAGTTTAAAAGCCGA 60.392 40.000 0.00 0.00 0.00 5.54
1483 1538 4.795278 GCATCATCAGAAGTTTAAAAGCCG 59.205 41.667 0.00 0.00 0.00 5.52
1484 1539 5.713025 TGCATCATCAGAAGTTTAAAAGCC 58.287 37.500 0.00 0.00 0.00 4.35
1523 1579 7.523293 TGCTAAGATTTCTTCAACATTTCCA 57.477 32.000 0.00 0.00 37.40 3.53
1524 1580 8.031277 ACATGCTAAGATTTCTTCAACATTTCC 58.969 33.333 0.00 0.00 37.40 3.13
1531 1587 7.105588 TGCTAGACATGCTAAGATTTCTTCAA 58.894 34.615 0.00 0.00 37.40 2.69
1532 1588 6.643388 TGCTAGACATGCTAAGATTTCTTCA 58.357 36.000 0.00 0.00 37.40 3.02
1590 1646 7.679659 TTCGTCATCGTCATTAGAATGTTAG 57.320 36.000 2.32 0.00 38.33 2.34
1688 1744 0.107508 ATTCTCACTGCCACGATGGG 60.108 55.000 6.23 0.00 38.19 4.00
1931 1993 1.927895 CCTGCGGTGACAGATAAGTC 58.072 55.000 0.00 0.00 40.25 3.01
1935 1997 1.337384 ATGGCCTGCGGTGACAGATA 61.337 55.000 3.32 0.00 40.25 1.98
2114 2185 3.874392 AGTGCCCAATTAAGCAATGAC 57.126 42.857 3.32 0.00 41.48 3.06
2147 2218 3.623060 TGCAGAGGAACGAATATTTCAGC 59.377 43.478 0.00 0.00 0.00 4.26
2319 2390 1.076995 GGGCTTACCATCACCACCC 60.077 63.158 0.00 0.00 39.85 4.61
2322 2393 0.986019 ATCGGGGCTTACCATCACCA 60.986 55.000 0.00 0.00 42.91 4.17
2336 2407 2.084546 GGTTCCTCAAAGTCAATCGGG 58.915 52.381 0.00 0.00 0.00 5.14
2339 2410 1.468914 GCCGGTTCCTCAAAGTCAATC 59.531 52.381 1.90 0.00 0.00 2.67
2341 2412 0.181587 TGCCGGTTCCTCAAAGTCAA 59.818 50.000 1.90 0.00 0.00 3.18
2342 2413 0.250295 CTGCCGGTTCCTCAAAGTCA 60.250 55.000 1.90 0.00 0.00 3.41
2346 2417 1.374947 CTCCTGCCGGTTCCTCAAA 59.625 57.895 1.90 0.00 0.00 2.69
2348 2419 3.706373 GCTCCTGCCGGTTCCTCA 61.706 66.667 1.90 0.00 0.00 3.86
2349 2420 4.821589 CGCTCCTGCCGGTTCCTC 62.822 72.222 1.90 0.00 35.36 3.71
2359 2430 1.310933 ATGAAAAGGCAGCGCTCCTG 61.311 55.000 23.41 9.67 44.67 3.86
2360 2431 0.610232 AATGAAAAGGCAGCGCTCCT 60.610 50.000 18.96 18.96 34.90 3.69
2361 2432 1.094785 TAATGAAAAGGCAGCGCTCC 58.905 50.000 7.13 12.68 0.00 4.70
2362 2433 2.420022 TCTTAATGAAAAGGCAGCGCTC 59.580 45.455 7.13 2.01 0.00 5.03
2363 2434 2.162408 GTCTTAATGAAAAGGCAGCGCT 59.838 45.455 2.64 2.64 31.25 5.92
2364 2435 2.162408 AGTCTTAATGAAAAGGCAGCGC 59.838 45.455 0.00 0.00 33.40 5.92
2365 2436 3.436704 TGAGTCTTAATGAAAAGGCAGCG 59.563 43.478 0.00 0.00 33.40 5.18
2366 2437 5.573337 ATGAGTCTTAATGAAAAGGCAGC 57.427 39.130 0.00 0.00 33.40 5.25
2367 2438 6.313905 ACGTATGAGTCTTAATGAAAAGGCAG 59.686 38.462 0.00 0.00 33.40 4.85
2368 2439 6.170506 ACGTATGAGTCTTAATGAAAAGGCA 58.829 36.000 0.00 0.00 33.40 4.75
2369 2440 6.663944 ACGTATGAGTCTTAATGAAAAGGC 57.336 37.500 0.00 0.00 0.00 4.35
2370 2441 8.697846 TGTACGTATGAGTCTTAATGAAAAGG 57.302 34.615 0.00 0.00 0.00 3.11
2371 2442 8.808529 CCTGTACGTATGAGTCTTAATGAAAAG 58.191 37.037 0.00 0.00 0.00 2.27
2372 2443 7.277098 GCCTGTACGTATGAGTCTTAATGAAAA 59.723 37.037 0.00 0.00 0.00 2.29
2373 2444 6.755141 GCCTGTACGTATGAGTCTTAATGAAA 59.245 38.462 0.00 0.00 0.00 2.69
2374 2445 6.127563 TGCCTGTACGTATGAGTCTTAATGAA 60.128 38.462 0.00 0.00 0.00 2.57
2375 2446 5.358725 TGCCTGTACGTATGAGTCTTAATGA 59.641 40.000 0.00 0.00 0.00 2.57
2376 2447 5.588240 TGCCTGTACGTATGAGTCTTAATG 58.412 41.667 0.00 0.00 0.00 1.90
2377 2448 5.847111 TGCCTGTACGTATGAGTCTTAAT 57.153 39.130 0.00 0.00 0.00 1.40
2378 2449 5.648178 TTGCCTGTACGTATGAGTCTTAA 57.352 39.130 0.00 0.00 0.00 1.85
2379 2450 5.358725 TGATTGCCTGTACGTATGAGTCTTA 59.641 40.000 0.00 0.00 0.00 2.10
2380 2451 4.159693 TGATTGCCTGTACGTATGAGTCTT 59.840 41.667 0.00 0.00 0.00 3.01
2381 2452 3.699538 TGATTGCCTGTACGTATGAGTCT 59.300 43.478 0.00 0.00 0.00 3.24
2382 2453 4.041740 TGATTGCCTGTACGTATGAGTC 57.958 45.455 0.00 0.00 0.00 3.36
2383 2454 4.181578 GTTGATTGCCTGTACGTATGAGT 58.818 43.478 0.00 0.00 0.00 3.41
2384 2455 4.180817 TGTTGATTGCCTGTACGTATGAG 58.819 43.478 0.00 0.00 0.00 2.90
2385 2456 4.195225 TGTTGATTGCCTGTACGTATGA 57.805 40.909 0.00 0.00 0.00 2.15
2386 2457 5.265477 CAATGTTGATTGCCTGTACGTATG 58.735 41.667 0.00 0.00 32.83 2.39
2387 2458 5.484173 CAATGTTGATTGCCTGTACGTAT 57.516 39.130 0.00 0.00 32.83 3.06
2388 2459 4.937696 CAATGTTGATTGCCTGTACGTA 57.062 40.909 0.00 0.00 32.83 3.57
2389 2460 3.829886 CAATGTTGATTGCCTGTACGT 57.170 42.857 0.00 0.00 32.83 3.57
2398 2469 4.823157 TGATCCCAAAGCAATGTTGATTG 58.177 39.130 0.00 1.78 41.82 2.67
2399 2470 5.424252 AGATGATCCCAAAGCAATGTTGATT 59.576 36.000 0.00 0.00 38.62 2.57
2400 2471 4.960469 AGATGATCCCAAAGCAATGTTGAT 59.040 37.500 0.00 0.00 0.00 2.57
2401 2472 4.346730 AGATGATCCCAAAGCAATGTTGA 58.653 39.130 0.00 0.00 0.00 3.18
2402 2473 4.730949 AGATGATCCCAAAGCAATGTTG 57.269 40.909 0.00 0.00 0.00 3.33
2403 2474 5.337813 GGAAAGATGATCCCAAAGCAATGTT 60.338 40.000 0.00 0.00 0.00 2.71
2404 2475 4.161001 GGAAAGATGATCCCAAAGCAATGT 59.839 41.667 0.00 0.00 0.00 2.71
2405 2476 4.160814 TGGAAAGATGATCCCAAAGCAATG 59.839 41.667 0.00 0.00 36.04 2.82
2406 2477 4.355549 TGGAAAGATGATCCCAAAGCAAT 58.644 39.130 0.00 0.00 36.04 3.56
2407 2478 3.777087 TGGAAAGATGATCCCAAAGCAA 58.223 40.909 0.00 0.00 36.04 3.91
2408 2479 3.454719 TGGAAAGATGATCCCAAAGCA 57.545 42.857 0.00 0.00 36.04 3.91
2409 2480 5.349061 AATTGGAAAGATGATCCCAAAGC 57.651 39.130 5.87 0.00 41.40 3.51
2410 2481 5.422970 TGGAATTGGAAAGATGATCCCAAAG 59.577 40.000 5.87 0.00 41.40 2.77
2428 2499 1.113788 CCCGCATGGATGTTGGAATT 58.886 50.000 0.00 0.00 37.49 2.17
2430 2501 0.394216 CTCCCGCATGGATGTTGGAA 60.394 55.000 0.00 0.00 44.07 3.53
2431 2502 1.224315 CTCCCGCATGGATGTTGGA 59.776 57.895 0.00 0.00 44.07 3.53
2432 2503 1.825191 CCTCCCGCATGGATGTTGG 60.825 63.158 0.00 0.00 44.07 3.77
2434 2505 2.124151 GCCTCCCGCATGGATGTT 60.124 61.111 0.00 0.00 44.07 2.71
2435 2506 4.195334 GGCCTCCCGCATGGATGT 62.195 66.667 0.00 0.00 44.07 3.06
2437 2508 2.512986 TTTTGGCCTCCCGCATGGAT 62.513 55.000 3.32 0.00 44.07 3.41
2438 2509 3.216985 TTTTGGCCTCCCGCATGGA 62.217 57.895 3.32 0.00 42.41 3.41
2440 2511 2.887360 CTTTTGGCCTCCCGCATG 59.113 61.111 3.32 0.00 40.31 4.06
2441 2512 3.070576 GCTTTTGGCCTCCCGCAT 61.071 61.111 3.32 0.00 40.31 4.73
2443 2514 1.728490 CTATGCTTTTGGCCTCCCGC 61.728 60.000 3.32 2.20 40.92 6.13
2445 2516 0.684153 TGCTATGCTTTTGGCCTCCC 60.684 55.000 3.32 0.00 40.92 4.30
2446 2517 0.743097 CTGCTATGCTTTTGGCCTCC 59.257 55.000 3.32 0.00 40.92 4.30
2448 2519 2.220653 TTCTGCTATGCTTTTGGCCT 57.779 45.000 3.32 0.00 40.92 5.19
2449 2520 3.192466 CAATTCTGCTATGCTTTTGGCC 58.808 45.455 0.00 0.00 40.92 5.36
2451 2522 4.178540 CCACAATTCTGCTATGCTTTTGG 58.821 43.478 0.00 0.00 0.00 3.28
2452 2523 3.615496 GCCACAATTCTGCTATGCTTTTG 59.385 43.478 0.00 0.00 0.00 2.44
2453 2524 3.512724 AGCCACAATTCTGCTATGCTTTT 59.487 39.130 0.00 0.00 32.56 2.27
2454 2525 3.094572 AGCCACAATTCTGCTATGCTTT 58.905 40.909 0.00 0.00 32.56 3.51
2455 2526 2.731572 AGCCACAATTCTGCTATGCTT 58.268 42.857 0.00 0.00 32.56 3.91
2456 2527 2.431954 AGCCACAATTCTGCTATGCT 57.568 45.000 0.00 0.00 32.56 3.79
2457 2528 4.843220 AATAGCCACAATTCTGCTATGC 57.157 40.909 11.60 0.00 45.10 3.14
2458 2529 8.102800 TGATTAATAGCCACAATTCTGCTATG 57.897 34.615 11.60 0.00 45.10 2.23
2460 2531 7.775093 ACTTGATTAATAGCCACAATTCTGCTA 59.225 33.333 3.37 3.37 41.43 3.49
2461 2532 6.604795 ACTTGATTAATAGCCACAATTCTGCT 59.395 34.615 0.00 0.00 39.10 4.24
2462 2533 6.799512 ACTTGATTAATAGCCACAATTCTGC 58.200 36.000 0.00 0.00 0.00 4.26
2463 2534 7.988737 TGACTTGATTAATAGCCACAATTCTG 58.011 34.615 0.00 0.00 0.00 3.02
2464 2535 8.627403 CATGACTTGATTAATAGCCACAATTCT 58.373 33.333 0.00 0.00 0.00 2.40
2465 2536 7.380602 GCATGACTTGATTAATAGCCACAATTC 59.619 37.037 0.00 0.00 0.00 2.17
2466 2537 7.147863 TGCATGACTTGATTAATAGCCACAATT 60.148 33.333 0.00 0.00 0.00 2.32
2467 2538 6.321945 TGCATGACTTGATTAATAGCCACAAT 59.678 34.615 0.00 0.00 0.00 2.71
2468 2539 5.651576 TGCATGACTTGATTAATAGCCACAA 59.348 36.000 0.00 0.00 0.00 3.33
2469 2540 5.192176 TGCATGACTTGATTAATAGCCACA 58.808 37.500 0.00 0.00 0.00 4.17
2470 2541 5.756195 TGCATGACTTGATTAATAGCCAC 57.244 39.130 0.00 0.00 0.00 5.01
2471 2542 8.105197 AGATATGCATGACTTGATTAATAGCCA 58.895 33.333 10.16 0.00 0.00 4.75
2472 2543 8.503458 AGATATGCATGACTTGATTAATAGCC 57.497 34.615 10.16 0.00 0.00 3.93
2473 2544 9.381033 AGAGATATGCATGACTTGATTAATAGC 57.619 33.333 10.16 0.00 0.00 2.97
2476 2547 9.570468 AACAGAGATATGCATGACTTGATTAAT 57.430 29.630 10.16 0.00 0.00 1.40
2477 2548 8.833493 CAACAGAGATATGCATGACTTGATTAA 58.167 33.333 10.16 0.00 0.00 1.40
2478 2549 7.989170 ACAACAGAGATATGCATGACTTGATTA 59.011 33.333 10.16 0.00 0.00 1.75
2479 2550 6.827251 ACAACAGAGATATGCATGACTTGATT 59.173 34.615 10.16 2.01 0.00 2.57
2480 2551 6.354938 ACAACAGAGATATGCATGACTTGAT 58.645 36.000 10.16 0.00 0.00 2.57
2481 2552 5.737860 ACAACAGAGATATGCATGACTTGA 58.262 37.500 10.16 0.00 0.00 3.02
2482 2553 6.432607 AACAACAGAGATATGCATGACTTG 57.567 37.500 10.16 11.03 0.00 3.16
2483 2554 6.624423 GCAAACAACAGAGATATGCATGACTT 60.624 38.462 10.16 0.00 32.80 3.01
2484 2555 5.163683 GCAAACAACAGAGATATGCATGACT 60.164 40.000 10.16 8.33 32.80 3.41
2485 2556 5.032863 GCAAACAACAGAGATATGCATGAC 58.967 41.667 10.16 3.02 32.80 3.06
2486 2557 4.096833 GGCAAACAACAGAGATATGCATGA 59.903 41.667 10.16 0.00 34.14 3.07
2487 2558 4.097437 AGGCAAACAACAGAGATATGCATG 59.903 41.667 10.16 0.00 34.14 4.06
2488 2559 4.097437 CAGGCAAACAACAGAGATATGCAT 59.903 41.667 3.79 3.79 34.14 3.96
2531 2602 0.666913 GGCTATGGCTGCACATTGAG 59.333 55.000 0.50 0.00 38.73 3.02
2544 2616 0.462047 GGTCCCTTGACACGGCTATG 60.462 60.000 0.00 0.00 43.65 2.23
2642 2714 2.230508 CGAACAGGCAACCAGTAGTCTA 59.769 50.000 0.00 0.00 37.17 2.59
2643 2715 1.000955 CGAACAGGCAACCAGTAGTCT 59.999 52.381 0.00 0.00 37.17 3.24
2700 2772 0.179073 ACGCCATGTACCTGCAGATC 60.179 55.000 17.39 5.55 0.00 2.75
2804 2876 7.981789 GTGAAGATGGATACTATCTTTGTGACA 59.018 37.037 10.63 3.20 43.07 3.58
2807 2879 7.984050 AGTGTGAAGATGGATACTATCTTTGTG 59.016 37.037 10.63 0.00 43.07 3.33
2817 2889 3.535561 CCACCAGTGTGAAGATGGATAC 58.464 50.000 0.00 0.00 45.76 2.24
2818 2890 2.092968 GCCACCAGTGTGAAGATGGATA 60.093 50.000 0.00 0.00 45.76 2.59
2820 2892 0.036732 GCCACCAGTGTGAAGATGGA 59.963 55.000 0.00 0.00 45.76 3.41
2821 2893 0.037303 AGCCACCAGTGTGAAGATGG 59.963 55.000 0.00 0.00 45.76 3.51
2822 2894 1.901591 AAGCCACCAGTGTGAAGATG 58.098 50.000 0.00 0.00 45.76 2.90
2823 2895 2.664402 AAAGCCACCAGTGTGAAGAT 57.336 45.000 0.00 0.00 45.76 2.40
2824 2896 2.435372 AAAAGCCACCAGTGTGAAGA 57.565 45.000 0.00 0.00 45.76 2.87
2825 2897 3.820467 TGATAAAAGCCACCAGTGTGAAG 59.180 43.478 0.00 0.00 45.76 3.02
2826 2898 3.826524 TGATAAAAGCCACCAGTGTGAA 58.173 40.909 0.00 0.00 45.76 3.18
2827 2899 3.500448 TGATAAAAGCCACCAGTGTGA 57.500 42.857 0.00 0.00 45.76 3.58
2834 2906 4.298332 CAACAGTGTTGATAAAAGCCACC 58.702 43.478 28.44 0.00 0.00 4.61
2842 2914 8.602328 CAATTTTTCAAGCAACAGTGTTGATAA 58.398 29.630 34.65 21.20 30.50 1.75
2845 2917 6.090628 GTCAATTTTTCAAGCAACAGTGTTGA 59.909 34.615 34.65 15.05 0.00 3.18
2847 2919 5.351189 GGTCAATTTTTCAAGCAACAGTGTT 59.649 36.000 1.64 1.64 0.00 3.32
2850 2922 5.127682 AGAGGTCAATTTTTCAAGCAACAGT 59.872 36.000 0.00 0.00 0.00 3.55
2851 2923 5.461078 CAGAGGTCAATTTTTCAAGCAACAG 59.539 40.000 0.00 0.00 0.00 3.16
2852 2924 5.350633 CAGAGGTCAATTTTTCAAGCAACA 58.649 37.500 0.00 0.00 0.00 3.33
2853 2925 4.209911 GCAGAGGTCAATTTTTCAAGCAAC 59.790 41.667 0.00 0.00 0.00 4.17
2854 2926 4.099881 AGCAGAGGTCAATTTTTCAAGCAA 59.900 37.500 0.00 0.00 0.00 3.91
2855 2927 3.638160 AGCAGAGGTCAATTTTTCAAGCA 59.362 39.130 0.00 0.00 0.00 3.91
2856 2928 3.985925 CAGCAGAGGTCAATTTTTCAAGC 59.014 43.478 0.00 0.00 0.00 4.01
2857 2929 4.553323 CCAGCAGAGGTCAATTTTTCAAG 58.447 43.478 0.00 0.00 0.00 3.02
2858 2930 3.243839 GCCAGCAGAGGTCAATTTTTCAA 60.244 43.478 0.00 0.00 0.00 2.69
2859 2931 2.297033 GCCAGCAGAGGTCAATTTTTCA 59.703 45.455 0.00 0.00 0.00 2.69
2860 2932 2.297033 TGCCAGCAGAGGTCAATTTTTC 59.703 45.455 0.00 0.00 0.00 2.29
2861 2933 2.318908 TGCCAGCAGAGGTCAATTTTT 58.681 42.857 0.00 0.00 0.00 1.94
2862 2934 1.999648 TGCCAGCAGAGGTCAATTTT 58.000 45.000 0.00 0.00 0.00 1.82
2863 2935 1.822990 CATGCCAGCAGAGGTCAATTT 59.177 47.619 0.00 0.00 0.00 1.82
2866 2938 0.321919 GACATGCCAGCAGAGGTCAA 60.322 55.000 13.67 0.00 0.00 3.18
2867 2939 1.196766 AGACATGCCAGCAGAGGTCA 61.197 55.000 18.20 0.00 31.96 4.02
2868 2940 0.826715 TAGACATGCCAGCAGAGGTC 59.173 55.000 11.66 11.66 0.00 3.85
2869 2941 0.539051 GTAGACATGCCAGCAGAGGT 59.461 55.000 0.00 0.00 0.00 3.85
2870 2942 0.538584 TGTAGACATGCCAGCAGAGG 59.461 55.000 0.00 0.00 0.00 3.69
2871 2943 2.005451 GTTGTAGACATGCCAGCAGAG 58.995 52.381 0.00 0.00 0.00 3.35
2872 2944 1.347378 TGTTGTAGACATGCCAGCAGA 59.653 47.619 0.00 0.00 32.00 4.26
2873 2945 1.736126 CTGTTGTAGACATGCCAGCAG 59.264 52.381 0.00 0.00 37.69 4.24
2874 2946 1.611410 CCTGTTGTAGACATGCCAGCA 60.611 52.381 0.00 0.00 37.69 4.41
2875 2947 1.089920 CCTGTTGTAGACATGCCAGC 58.910 55.000 0.00 0.00 37.69 4.85
2876 2948 2.625737 CTCCTGTTGTAGACATGCCAG 58.374 52.381 0.00 0.00 37.69 4.85
2877 2949 1.278985 CCTCCTGTTGTAGACATGCCA 59.721 52.381 0.00 0.00 37.69 4.92
2879 2951 2.419297 CCTCCTCCTGTTGTAGACATGC 60.419 54.545 0.00 0.00 37.69 4.06
2882 2954 2.248248 CACCTCCTCCTGTTGTAGACA 58.752 52.381 0.00 0.00 36.65 3.41
2959 3059 2.220133 CGTTGTGTTTACCTCGTTGGAG 59.780 50.000 4.38 0.00 39.71 3.86
2960 3060 2.203401 CGTTGTGTTTACCTCGTTGGA 58.797 47.619 4.38 0.00 39.71 3.53
2978 3078 0.179062 GCTGATGGAAGGATGAGCGT 60.179 55.000 0.00 0.00 0.00 5.07
2980 3080 1.140452 TCAGCTGATGGAAGGATGAGC 59.860 52.381 13.74 0.00 33.16 4.26
3034 3135 2.619074 GGTAAGCAGGGCAAGTCATCTT 60.619 50.000 0.00 0.00 0.00 2.40
3050 3151 1.745489 GCCACGGCTTCCTGGTAAG 60.745 63.158 0.00 0.00 38.26 2.34
3224 3329 3.043713 TTCACTTGCTCGCTGCGG 61.044 61.111 23.03 13.77 46.63 5.69
3229 3334 1.537202 AGGAAATGTTCACTTGCTCGC 59.463 47.619 0.00 0.00 0.00 5.03
3232 3337 3.416156 GAGGAGGAAATGTTCACTTGCT 58.584 45.455 0.00 0.00 0.00 3.91
3295 3414 1.442769 GGCAACGTCATCAGACACAT 58.557 50.000 0.00 0.00 45.23 3.21
3353 3472 5.303165 ACATACATGATCAGTACAGGCATG 58.697 41.667 15.32 15.32 41.44 4.06
3400 3519 2.601481 GGAGACGCACATTCACAAAG 57.399 50.000 0.00 0.00 0.00 2.77
3445 3570 6.863126 CGGTTTTCTTGTCAGAATTAGCATTT 59.137 34.615 0.00 0.00 38.89 2.32
3610 3750 1.150536 TCAAGTGCCCTGTGAACCC 59.849 57.895 0.00 0.00 0.00 4.11
3692 3835 2.015456 TCCTCAACCTGAGCTCTCAA 57.985 50.000 16.19 0.00 42.98 3.02
3762 3905 6.554334 TTTGACTTGCTATGGTTGACTTAC 57.446 37.500 0.00 0.00 0.00 2.34
3806 3950 4.452795 GCTCATGTCATCATCAGGATTCAG 59.547 45.833 0.00 0.00 32.57 3.02
3813 3957 4.009370 AGGATGCTCATGTCATCATCAG 57.991 45.455 22.51 2.28 41.46 2.90
3949 4099 9.941325 AACTGTTTGAATAATATGCATGGAAAA 57.059 25.926 10.16 0.00 0.00 2.29
3951 4101 8.747471 TGAACTGTTTGAATAATATGCATGGAA 58.253 29.630 10.16 0.00 0.00 3.53
3953 4103 8.929827 TTGAACTGTTTGAATAATATGCATGG 57.070 30.769 10.16 0.00 0.00 3.66
3990 4141 2.108075 TCCAAGAAAATGAGCAGTCCCA 59.892 45.455 0.00 0.00 0.00 4.37
3995 4146 4.843220 ACTGTTCCAAGAAAATGAGCAG 57.157 40.909 0.00 0.00 41.41 4.24
4035 4186 4.699735 TGCACTCTTCTTTGAACTGTTTGA 59.300 37.500 0.00 0.00 0.00 2.69
4077 4228 1.734655 AGAAAGGTGGGCAGAGAAGA 58.265 50.000 0.00 0.00 0.00 2.87
4082 4233 2.912956 ACTCATAAGAAAGGTGGGCAGA 59.087 45.455 0.00 0.00 0.00 4.26
4104 4255 2.982470 GCTCCTTTTGAAGTTTGATGCG 59.018 45.455 0.00 0.00 0.00 4.73
4156 4307 9.618890 AGATAATACAACATAACAGATTGCAGT 57.381 29.630 0.00 0.00 0.00 4.40
4177 4328 3.266772 AGAATGGTGGGCAGTGAAGATAA 59.733 43.478 0.00 0.00 0.00 1.75
4195 4346 7.944554 TGAAGTTTGATGGGACTTAGAAAGAAT 59.055 33.333 0.00 0.00 36.31 2.40
4202 4353 6.490040 TCCTTTTGAAGTTTGATGGGACTTAG 59.510 38.462 0.00 0.00 36.31 2.18
4208 4359 6.648879 TTACTCCTTTTGAAGTTTGATGGG 57.351 37.500 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.