Multiple sequence alignment - TraesCS7D01G417100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G417100 chr7D 100.000 5165 0 0 1 5165 535837277 535842441 0.000000e+00 9539.0
1 TraesCS7D01G417100 chr7A 94.055 1867 62 26 1244 3096 617580488 617578657 0.000000e+00 2787.0
2 TraesCS7D01G417100 chr7A 86.410 1582 102 41 3121 4660 617578677 617577167 0.000000e+00 1626.0
3 TraesCS7D01G417100 chr7A 84.862 687 81 15 1 680 617582536 617581866 0.000000e+00 671.0
4 TraesCS7D01G417100 chr7A 87.246 345 18 12 4657 5000 617577120 617576801 2.270000e-98 370.0
5 TraesCS7D01G417100 chr7B 93.741 1470 38 24 1238 2687 578193660 578195095 0.000000e+00 2156.0
6 TraesCS7D01G417100 chr7B 91.058 1163 71 14 2688 3845 578195197 578196331 0.000000e+00 1541.0
7 TraesCS7D01G417100 chr7B 85.111 1256 131 25 1 1238 578192388 578193605 0.000000e+00 1232.0
8 TraesCS7D01G417100 chr7B 88.071 788 44 22 3878 4660 578196329 578197071 0.000000e+00 889.0
9 TraesCS7D01G417100 chr7B 90.759 303 12 8 4657 4954 578197118 578197409 1.740000e-104 390.0
10 TraesCS7D01G417100 chr2A 97.872 94 2 0 5072 5165 504284717 504284624 4.140000e-36 163.0
11 TraesCS7D01G417100 chr1D 95.745 94 4 0 5072 5165 479333928 479333835 8.960000e-33 152.0
12 TraesCS7D01G417100 chr3D 94.000 100 4 2 5066 5165 284856449 284856352 3.220000e-32 150.0
13 TraesCS7D01G417100 chr5B 95.556 90 4 0 5072 5161 684148980 684149069 1.500000e-30 145.0
14 TraesCS7D01G417100 chr5B 94.624 93 4 1 5070 5162 394003467 394003558 5.390000e-30 143.0
15 TraesCS7D01G417100 chr2B 93.684 95 5 1 5071 5165 245817770 245817677 1.940000e-29 141.0
16 TraesCS7D01G417100 chr1B 92.857 98 5 2 5069 5165 288448290 288448194 1.940000e-29 141.0
17 TraesCS7D01G417100 chr1B 97.222 36 1 0 405 440 404518009 404518044 1.550000e-05 62.1
18 TraesCS7D01G417100 chr3B 92.708 96 5 2 5069 5163 573988531 573988625 2.510000e-28 137.0
19 TraesCS7D01G417100 chr3B 92.135 89 6 1 5077 5165 776960241 776960154 1.950000e-24 124.0
20 TraesCS7D01G417100 chr4D 80.000 115 22 1 404 517 482939684 482939570 3.310000e-12 84.2
21 TraesCS7D01G417100 chr4A 96.078 51 1 1 405 454 615167408 615167458 1.190000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G417100 chr7D 535837277 535842441 5164 False 9539.0 9539 100.00000 1 5165 1 chr7D.!!$F1 5164
1 TraesCS7D01G417100 chr7A 617576801 617582536 5735 True 1363.5 2787 88.14325 1 5000 4 chr7A.!!$R1 4999
2 TraesCS7D01G417100 chr7B 578192388 578197409 5021 False 1241.6 2156 89.74800 1 4954 5 chr7B.!!$F1 4953

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
906 1768 0.250234 TCAAGCAGGAATCTCCACCG 59.750 55.0 0.00 0.0 39.61 4.94 F
1065 1927 0.099436 CTTGCTTTGTATGCCGCTCC 59.901 55.0 0.00 0.0 0.00 4.70 F
1317 2301 0.319900 CCCATCCCACATCGATCGAC 60.320 60.0 22.06 0.0 0.00 4.20 F
1892 2879 0.524392 GATCGATCGCATCTAGGCCG 60.524 60.0 11.09 0.0 0.00 6.13 F
3244 4391 0.036199 TGCTTGCAAATGGGCATTCC 60.036 50.0 6.97 0.0 44.48 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1971 2966 1.274703 GGGACCTGGAGATGGAAGCA 61.275 60.0 0.00 0.0 0.00 3.91 R
2986 4093 1.407936 TCAGATCCCTAGAGCACAGC 58.592 55.0 0.00 0.0 0.00 4.40 R
3131 4278 0.114954 AGTGGTACCTTCACCCCGTA 59.885 55.0 14.36 0.0 37.84 4.02 R
3833 5007 0.037697 AGTGCTACCGAATTGCGTCA 60.038 50.0 0.00 0.0 38.67 4.35 R
5103 6359 0.037975 TTCCACGTCGAAACCCTAGC 60.038 55.0 0.00 0.0 0.00 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 54 5.401531 TGACAAGTCTACCAAGTATCACC 57.598 43.478 1.53 0.00 0.00 4.02
111 114 2.094078 CCAAAACATGCAATCCGATGGT 60.094 45.455 0.00 0.00 0.00 3.55
113 116 1.838112 AACATGCAATCCGATGGTGT 58.162 45.000 0.00 0.00 0.00 4.16
145 148 1.007118 TCACCATAGCTCCTCTCCACA 59.993 52.381 0.00 0.00 0.00 4.17
194 198 5.126545 GGGTATTACCTTGAAAACACCATCC 59.873 44.000 12.54 0.00 38.64 3.51
251 255 8.915654 CACCAACTTTTCTTGAAACATAATAGC 58.084 33.333 0.00 0.00 0.00 2.97
258 262 9.959721 TTTTCTTGAAACATAATAGCTCTACCT 57.040 29.630 0.00 0.00 0.00 3.08
381 385 7.719633 TGTACTGCATAGAAAATTAGGGGAATC 59.280 37.037 0.00 0.00 0.00 2.52
387 391 3.526019 AGAAAATTAGGGGAATCCGGTGA 59.474 43.478 0.00 0.00 41.52 4.02
404 408 3.146066 GGTGAATGCAGGTAAGACACAA 58.854 45.455 0.00 0.00 0.00 3.33
426 430 6.260936 ACAAACATCTTGAGATTGACGAAGTT 59.739 34.615 0.00 0.00 34.04 2.66
457 461 1.347320 CTCGTAGTCAAGGGAAACGC 58.653 55.000 0.00 0.00 35.67 4.84
474 478 0.323629 CGCCTCCCCTTACTGAACAA 59.676 55.000 0.00 0.00 0.00 2.83
483 487 3.247648 CCCTTACTGAACAAATATCGCCG 59.752 47.826 0.00 0.00 0.00 6.46
488 492 4.719040 ACTGAACAAATATCGCCGAAAAC 58.281 39.130 0.00 0.00 0.00 2.43
491 495 1.746787 ACAAATATCGCCGAAAACCCC 59.253 47.619 0.00 0.00 0.00 4.95
512 517 7.085746 ACCCCGAAATAAAACAGAAAAATACG 58.914 34.615 0.00 0.00 0.00 3.06
523 528 6.422776 ACAGAAAAATACGAGCACTATTGG 57.577 37.500 0.00 0.00 0.00 3.16
526 531 4.616181 AAAATACGAGCACTATTGGCAC 57.384 40.909 0.00 0.00 0.00 5.01
529 534 1.999051 CGAGCACTATTGGCACGTC 59.001 57.895 0.00 0.00 39.84 4.34
530 535 1.421410 CGAGCACTATTGGCACGTCC 61.421 60.000 0.00 0.00 39.84 4.79
543 548 1.578583 CACGTCCGAAACTTCAACCT 58.421 50.000 0.00 0.00 0.00 3.50
544 549 1.937899 CACGTCCGAAACTTCAACCTT 59.062 47.619 0.00 0.00 0.00 3.50
547 552 1.001706 GTCCGAAACTTCAACCTTGGC 60.002 52.381 0.00 0.00 0.00 4.52
549 554 0.661020 CGAAACTTCAACCTTGGCGT 59.339 50.000 0.00 0.00 0.00 5.68
552 557 1.470051 AACTTCAACCTTGGCGTGTT 58.530 45.000 0.00 0.00 0.00 3.32
570 576 1.458486 TGGTTCCGCCACAAAGGAT 59.542 52.632 0.00 0.00 43.61 3.24
575 581 2.396590 TCCGCCACAAAGGATCTAAC 57.603 50.000 0.00 0.00 41.22 2.34
584 590 6.000219 CCACAAAGGATCTAACCATATGAGG 59.000 44.000 3.65 0.00 41.22 3.86
587 593 8.378565 CACAAAGGATCTAACCATATGAGGTAT 58.621 37.037 3.65 0.00 42.25 2.73
591 597 6.732862 AGGATCTAACCATATGAGGTATGCTT 59.267 38.462 3.65 0.00 42.25 3.91
604 612 5.365021 AGGTATGCTTAGCTCACAATCTT 57.635 39.130 5.60 0.00 30.31 2.40
677 685 1.950828 CTCAATAGGCAGGAGCTGTG 58.049 55.000 0.00 0.00 41.70 3.66
678 686 1.483827 CTCAATAGGCAGGAGCTGTGA 59.516 52.381 0.00 0.00 41.70 3.58
679 687 1.908619 TCAATAGGCAGGAGCTGTGAA 59.091 47.619 0.00 0.00 41.70 3.18
680 688 2.305635 TCAATAGGCAGGAGCTGTGAAA 59.694 45.455 0.00 0.00 41.70 2.69
681 689 3.084039 CAATAGGCAGGAGCTGTGAAAA 58.916 45.455 0.00 0.00 41.70 2.29
682 690 3.659183 ATAGGCAGGAGCTGTGAAAAT 57.341 42.857 0.00 0.00 41.70 1.82
683 691 1.831580 AGGCAGGAGCTGTGAAAATC 58.168 50.000 0.00 0.00 41.70 2.17
684 692 1.074405 AGGCAGGAGCTGTGAAAATCA 59.926 47.619 0.00 0.00 41.70 2.57
685 693 2.097825 GGCAGGAGCTGTGAAAATCAT 58.902 47.619 0.00 0.00 41.70 2.45
686 694 2.494870 GGCAGGAGCTGTGAAAATCATT 59.505 45.455 0.00 0.00 41.70 2.57
687 695 3.056322 GGCAGGAGCTGTGAAAATCATTT 60.056 43.478 0.00 0.00 41.70 2.32
688 696 4.562143 GGCAGGAGCTGTGAAAATCATTTT 60.562 41.667 0.00 0.00 41.70 1.82
689 697 4.624452 GCAGGAGCTGTGAAAATCATTTTC 59.376 41.667 14.98 14.98 42.42 2.29
690 698 5.166398 CAGGAGCTGTGAAAATCATTTTCC 58.834 41.667 18.35 11.11 46.49 3.13
691 699 4.834496 AGGAGCTGTGAAAATCATTTTCCA 59.166 37.500 18.35 14.40 46.49 3.53
692 700 5.482878 AGGAGCTGTGAAAATCATTTTCCAT 59.517 36.000 18.35 4.41 46.49 3.41
693 701 5.809051 GGAGCTGTGAAAATCATTTTCCATC 59.191 40.000 18.35 11.80 46.49 3.51
694 702 5.727434 AGCTGTGAAAATCATTTTCCATCC 58.273 37.500 18.35 10.37 46.49 3.51
695 703 4.872124 GCTGTGAAAATCATTTTCCATCCC 59.128 41.667 18.35 4.21 46.49 3.85
696 704 5.070770 TGTGAAAATCATTTTCCATCCCG 57.929 39.130 18.35 0.00 46.49 5.14
697 705 4.769488 TGTGAAAATCATTTTCCATCCCGA 59.231 37.500 18.35 0.00 46.49 5.14
698 706 5.244851 TGTGAAAATCATTTTCCATCCCGAA 59.755 36.000 18.35 0.00 46.49 4.30
699 707 6.070881 TGTGAAAATCATTTTCCATCCCGAAT 60.071 34.615 18.35 0.00 46.49 3.34
700 708 6.476706 GTGAAAATCATTTTCCATCCCGAATC 59.523 38.462 18.35 0.00 46.49 2.52
701 709 6.154192 TGAAAATCATTTTCCATCCCGAATCA 59.846 34.615 18.35 0.00 46.49 2.57
702 710 6.736110 AAATCATTTTCCATCCCGAATCAT 57.264 33.333 0.00 0.00 0.00 2.45
703 711 5.717078 ATCATTTTCCATCCCGAATCATG 57.283 39.130 0.00 0.00 0.00 3.07
704 712 4.790937 TCATTTTCCATCCCGAATCATGA 58.209 39.130 0.00 0.00 0.00 3.07
705 713 4.580167 TCATTTTCCATCCCGAATCATGAC 59.420 41.667 0.00 0.00 0.00 3.06
706 714 3.643199 TTTCCATCCCGAATCATGACA 57.357 42.857 0.00 0.00 0.00 3.58
707 715 3.862877 TTCCATCCCGAATCATGACAT 57.137 42.857 0.00 0.00 0.00 3.06
708 716 4.972751 TTCCATCCCGAATCATGACATA 57.027 40.909 0.00 0.00 0.00 2.29
748 791 2.163010 CCCAACTAATTCAGCAGCACAG 59.837 50.000 0.00 0.00 0.00 3.66
783 826 6.436261 AGTGTACCGAATATCACTATTGACG 58.564 40.000 0.00 0.00 39.01 4.35
788 831 4.864806 CCGAATATCACTATTGACGGATGG 59.135 45.833 0.00 0.00 37.09 3.51
840 1702 1.004595 CATGCAGTCTGATGGTGACG 58.995 55.000 3.32 0.00 39.24 4.35
865 1727 6.058183 ACATGTCAATTACCATAAGCTCCTC 58.942 40.000 0.00 0.00 0.00 3.71
881 1743 1.153565 TCCTCCCCAGGGAAAGTAACT 59.846 52.381 7.25 0.00 44.66 2.24
906 1768 0.250234 TCAAGCAGGAATCTCCACCG 59.750 55.000 0.00 0.00 39.61 4.94
909 1771 2.190578 CAGGAATCTCCACCGGCC 59.809 66.667 0.00 0.00 39.61 6.13
914 1776 1.694169 AATCTCCACCGGCCCATCT 60.694 57.895 0.00 0.00 0.00 2.90
915 1777 1.281925 AATCTCCACCGGCCCATCTT 61.282 55.000 0.00 0.00 0.00 2.40
920 1782 1.303236 CACCGGCCCATCTTGAACA 60.303 57.895 0.00 0.00 0.00 3.18
927 1789 4.766891 CCGGCCCATCTTGAACAATTATAT 59.233 41.667 0.00 0.00 0.00 0.86
948 1810 4.911514 TTTCCAGTTTTGTTACTCCTGC 57.088 40.909 0.00 0.00 0.00 4.85
949 1811 2.858745 TCCAGTTTTGTTACTCCTGCC 58.141 47.619 0.00 0.00 0.00 4.85
950 1812 2.441750 TCCAGTTTTGTTACTCCTGCCT 59.558 45.455 0.00 0.00 0.00 4.75
951 1813 3.117663 TCCAGTTTTGTTACTCCTGCCTT 60.118 43.478 0.00 0.00 0.00 4.35
952 1814 3.636764 CCAGTTTTGTTACTCCTGCCTTT 59.363 43.478 0.00 0.00 0.00 3.11
953 1815 4.261614 CCAGTTTTGTTACTCCTGCCTTTC 60.262 45.833 0.00 0.00 0.00 2.62
954 1816 4.580580 CAGTTTTGTTACTCCTGCCTTTCT 59.419 41.667 0.00 0.00 0.00 2.52
955 1817 5.763204 CAGTTTTGTTACTCCTGCCTTTCTA 59.237 40.000 0.00 0.00 0.00 2.10
956 1818 6.431234 CAGTTTTGTTACTCCTGCCTTTCTAT 59.569 38.462 0.00 0.00 0.00 1.98
957 1819 6.431234 AGTTTTGTTACTCCTGCCTTTCTATG 59.569 38.462 0.00 0.00 0.00 2.23
958 1820 5.499004 TTGTTACTCCTGCCTTTCTATGT 57.501 39.130 0.00 0.00 0.00 2.29
959 1821 5.086104 TGTTACTCCTGCCTTTCTATGTC 57.914 43.478 0.00 0.00 0.00 3.06
960 1822 4.777896 TGTTACTCCTGCCTTTCTATGTCT 59.222 41.667 0.00 0.00 0.00 3.41
961 1823 5.955959 TGTTACTCCTGCCTTTCTATGTCTA 59.044 40.000 0.00 0.00 0.00 2.59
962 1824 6.439375 TGTTACTCCTGCCTTTCTATGTCTAA 59.561 38.462 0.00 0.00 0.00 2.10
963 1825 7.125811 TGTTACTCCTGCCTTTCTATGTCTAAT 59.874 37.037 0.00 0.00 0.00 1.73
964 1826 6.567602 ACTCCTGCCTTTCTATGTCTAATT 57.432 37.500 0.00 0.00 0.00 1.40
965 1827 6.587273 ACTCCTGCCTTTCTATGTCTAATTC 58.413 40.000 0.00 0.00 0.00 2.17
966 1828 5.601662 TCCTGCCTTTCTATGTCTAATTCG 58.398 41.667 0.00 0.00 0.00 3.34
967 1829 4.212214 CCTGCCTTTCTATGTCTAATTCGC 59.788 45.833 0.00 0.00 0.00 4.70
968 1830 4.127171 TGCCTTTCTATGTCTAATTCGCC 58.873 43.478 0.00 0.00 0.00 5.54
969 1831 4.127171 GCCTTTCTATGTCTAATTCGCCA 58.873 43.478 0.00 0.00 0.00 5.69
970 1832 4.024809 GCCTTTCTATGTCTAATTCGCCAC 60.025 45.833 0.00 0.00 0.00 5.01
971 1833 5.360591 CCTTTCTATGTCTAATTCGCCACT 58.639 41.667 0.00 0.00 0.00 4.00
985 1847 1.455383 GCCACTTGTGGTTGGAGGTG 61.455 60.000 19.47 0.00 0.00 4.00
986 1848 0.823356 CCACTTGTGGTTGGAGGTGG 60.823 60.000 11.39 0.00 38.26 4.61
993 1855 1.418637 GTGGTTGGAGGTGGTACAAGA 59.581 52.381 0.00 0.00 44.16 3.02
994 1856 2.039879 GTGGTTGGAGGTGGTACAAGAT 59.960 50.000 0.00 0.00 44.16 2.40
1016 1878 1.398739 AGTGATGTGTCGCTCTAGTCG 59.601 52.381 0.00 0.00 41.20 4.18
1019 1881 0.452184 ATGTGTCGCTCTAGTCGTGG 59.548 55.000 6.95 0.00 0.00 4.94
1054 1916 5.355596 TGGTATGGTTGTTTTCTTGCTTTG 58.644 37.500 0.00 0.00 0.00 2.77
1065 1927 0.099436 CTTGCTTTGTATGCCGCTCC 59.901 55.000 0.00 0.00 0.00 4.70
1073 1937 0.859232 GTATGCCGCTCCGTTGTATG 59.141 55.000 0.00 0.00 0.00 2.39
1076 1940 1.740296 GCCGCTCCGTTGTATGTGT 60.740 57.895 0.00 0.00 0.00 3.72
1084 1948 4.570772 GCTCCGTTGTATGTGTCATATTGT 59.429 41.667 0.00 0.00 0.00 2.71
1091 1955 7.063426 CGTTGTATGTGTCATATTGTCACTTCT 59.937 37.037 6.47 0.00 37.33 2.85
1116 1980 3.904800 TGAATCTGATACGCCTTTCCA 57.095 42.857 0.00 0.00 0.00 3.53
1118 1982 4.129380 TGAATCTGATACGCCTTTCCATG 58.871 43.478 0.00 0.00 0.00 3.66
1119 1983 4.141733 TGAATCTGATACGCCTTTCCATGA 60.142 41.667 0.00 0.00 0.00 3.07
1120 1984 3.904800 TCTGATACGCCTTTCCATGAA 57.095 42.857 0.00 0.00 0.00 2.57
1122 1986 4.191544 TCTGATACGCCTTTCCATGAAAG 58.808 43.478 9.14 9.14 45.86 2.62
1191 2067 6.705381 TCAAATTTGTCCCATGAATTTGTGTC 59.295 34.615 17.47 0.00 44.77 3.67
1317 2301 0.319900 CCCATCCCACATCGATCGAC 60.320 60.000 22.06 0.00 0.00 4.20
1332 2316 4.752514 GACCGATCGATCCCAACC 57.247 61.111 18.66 1.51 0.00 3.77
1333 2317 1.299926 GACCGATCGATCCCAACCG 60.300 63.158 18.66 7.36 0.00 4.44
1334 2318 1.731433 GACCGATCGATCCCAACCGA 61.731 60.000 18.66 0.00 39.25 4.69
1335 2319 1.113517 ACCGATCGATCCCAACCGAT 61.114 55.000 18.66 0.00 46.67 4.18
1336 2320 0.885879 CCGATCGATCCCAACCGATA 59.114 55.000 18.66 0.00 44.40 2.92
1337 2321 1.135373 CCGATCGATCCCAACCGATAG 60.135 57.143 18.66 1.53 44.40 2.08
1892 2879 0.524392 GATCGATCGCATCTAGGCCG 60.524 60.000 11.09 0.00 0.00 6.13
1949 2944 1.746470 TTCTCTATCTCCGTGCGTGA 58.254 50.000 0.00 0.00 0.00 4.35
1967 2962 2.808543 GTGACCGCTTGATTTTGAGACT 59.191 45.455 0.00 0.00 0.00 3.24
1971 2966 2.069273 CGCTTGATTTTGAGACTCCGT 58.931 47.619 0.00 0.00 0.00 4.69
1973 2968 2.413371 GCTTGATTTTGAGACTCCGTGC 60.413 50.000 0.00 0.00 0.00 5.34
1975 2970 3.126001 TGATTTTGAGACTCCGTGCTT 57.874 42.857 0.00 0.00 0.00 3.91
1977 2972 1.878953 TTTTGAGACTCCGTGCTTCC 58.121 50.000 0.00 0.00 0.00 3.46
1978 2973 0.756294 TTTGAGACTCCGTGCTTCCA 59.244 50.000 0.00 0.00 0.00 3.53
2117 3120 2.802667 CGCCCGCTTCAAGATCGTG 61.803 63.158 1.76 1.76 0.00 4.35
2542 3545 2.743928 CAAGGCCAGCAGGTCGAC 60.744 66.667 7.13 7.13 46.92 4.20
2583 3586 1.076705 GGAGGTGAGGGCCCAAATC 60.077 63.158 27.56 14.20 0.00 2.17
2612 3615 5.414360 TGACATCTTCTTCATAGCAGTGTC 58.586 41.667 0.00 0.00 32.29 3.67
2736 3839 4.031991 CGAATTCGTTCGGTGTTAGCATAA 59.968 41.667 19.67 0.00 40.48 1.90
2775 3878 7.976135 ATTCCATGATTCTGTCAGTTATAGC 57.024 36.000 0.00 0.00 40.92 2.97
2776 3879 6.737720 TCCATGATTCTGTCAGTTATAGCT 57.262 37.500 0.00 0.00 40.92 3.32
2874 3977 7.385205 TCAACGCATTCCTATTATCTTAAGAGC 59.615 37.037 11.53 3.88 0.00 4.09
2986 4093 2.572290 GGACGAAAGGGAATATGTGGG 58.428 52.381 0.00 0.00 0.00 4.61
3055 4162 6.455360 TGAAACAATAATCAGGAGGCAATC 57.545 37.500 0.00 0.00 0.00 2.67
3096 4243 1.612035 AGATTGGGATGTGGGGTGAT 58.388 50.000 0.00 0.00 0.00 3.06
3097 4244 1.932338 AGATTGGGATGTGGGGTGATT 59.068 47.619 0.00 0.00 0.00 2.57
3098 4245 2.034124 GATTGGGATGTGGGGTGATTG 58.966 52.381 0.00 0.00 0.00 2.67
3099 4246 1.079796 TTGGGATGTGGGGTGATTGA 58.920 50.000 0.00 0.00 0.00 2.57
3100 4247 1.307878 TGGGATGTGGGGTGATTGAT 58.692 50.000 0.00 0.00 0.00 2.57
3101 4248 1.063792 TGGGATGTGGGGTGATTGATG 60.064 52.381 0.00 0.00 0.00 3.07
3102 4249 1.696063 GGATGTGGGGTGATTGATGG 58.304 55.000 0.00 0.00 0.00 3.51
3103 4250 1.063717 GGATGTGGGGTGATTGATGGT 60.064 52.381 0.00 0.00 0.00 3.55
3104 4251 2.624029 GGATGTGGGGTGATTGATGGTT 60.624 50.000 0.00 0.00 0.00 3.67
3105 4252 1.921982 TGTGGGGTGATTGATGGTTG 58.078 50.000 0.00 0.00 0.00 3.77
3106 4253 1.185315 GTGGGGTGATTGATGGTTGG 58.815 55.000 0.00 0.00 0.00 3.77
3107 4254 0.783206 TGGGGTGATTGATGGTTGGT 59.217 50.000 0.00 0.00 0.00 3.67
3108 4255 1.996291 TGGGGTGATTGATGGTTGGTA 59.004 47.619 0.00 0.00 0.00 3.25
3109 4256 2.291282 TGGGGTGATTGATGGTTGGTAC 60.291 50.000 0.00 0.00 0.00 3.34
3110 4257 2.025321 GGGGTGATTGATGGTTGGTACT 60.025 50.000 0.00 0.00 0.00 2.73
3111 4258 3.016736 GGGTGATTGATGGTTGGTACTG 58.983 50.000 0.00 0.00 0.00 2.74
3112 4259 3.308117 GGGTGATTGATGGTTGGTACTGA 60.308 47.826 0.00 0.00 0.00 3.41
3113 4260 3.689649 GGTGATTGATGGTTGGTACTGAC 59.310 47.826 0.00 0.00 0.00 3.51
3114 4261 4.323417 GTGATTGATGGTTGGTACTGACA 58.677 43.478 0.00 0.00 0.00 3.58
3115 4262 4.393062 GTGATTGATGGTTGGTACTGACAG 59.607 45.833 0.00 0.00 0.00 3.51
3116 4263 4.041567 TGATTGATGGTTGGTACTGACAGT 59.958 41.667 13.68 13.68 0.00 3.55
3117 4264 4.431416 TTGATGGTTGGTACTGACAGTT 57.569 40.909 14.50 0.00 0.00 3.16
3118 4265 3.738982 TGATGGTTGGTACTGACAGTTG 58.261 45.455 14.50 0.00 0.00 3.16
3119 4266 3.389656 TGATGGTTGGTACTGACAGTTGA 59.610 43.478 14.50 0.00 0.00 3.18
3120 4267 3.188159 TGGTTGGTACTGACAGTTGAC 57.812 47.619 14.50 6.69 0.00 3.18
3121 4268 2.502130 TGGTTGGTACTGACAGTTGACA 59.498 45.455 14.50 7.85 0.00 3.58
3122 4269 3.055021 TGGTTGGTACTGACAGTTGACAA 60.055 43.478 14.50 13.21 0.00 3.18
3123 4270 3.560068 GGTTGGTACTGACAGTTGACAAG 59.440 47.826 14.50 0.00 0.00 3.16
3124 4271 4.439057 GTTGGTACTGACAGTTGACAAGA 58.561 43.478 14.50 0.00 0.00 3.02
3125 4272 4.955811 TGGTACTGACAGTTGACAAGAT 57.044 40.909 14.50 0.00 0.00 2.40
3126 4273 5.290493 TGGTACTGACAGTTGACAAGATT 57.710 39.130 14.50 0.00 0.00 2.40
3127 4274 5.056480 TGGTACTGACAGTTGACAAGATTG 58.944 41.667 14.50 0.00 0.00 2.67
3128 4275 5.057149 GGTACTGACAGTTGACAAGATTGT 58.943 41.667 14.50 0.00 45.65 2.71
3129 4276 5.050091 GGTACTGACAGTTGACAAGATTGTG 60.050 44.000 14.50 0.00 42.43 3.33
3130 4277 4.769688 ACTGACAGTTGACAAGATTGTGA 58.230 39.130 1.07 0.00 42.43 3.58
3131 4278 5.371526 ACTGACAGTTGACAAGATTGTGAT 58.628 37.500 1.07 0.00 42.43 3.06
3132 4279 6.524734 ACTGACAGTTGACAAGATTGTGATA 58.475 36.000 1.07 0.00 42.43 2.15
3133 4280 6.425114 ACTGACAGTTGACAAGATTGTGATAC 59.575 38.462 1.07 0.00 42.43 2.24
3134 4281 5.405269 TGACAGTTGACAAGATTGTGATACG 59.595 40.000 2.31 0.00 42.43 3.06
3135 4282 4.690748 ACAGTTGACAAGATTGTGATACGG 59.309 41.667 2.31 2.37 42.43 4.02
3136 4283 4.093408 CAGTTGACAAGATTGTGATACGGG 59.907 45.833 2.31 0.00 42.43 5.28
3137 4284 3.260475 TGACAAGATTGTGATACGGGG 57.740 47.619 2.31 0.00 42.43 5.73
3138 4285 2.569853 TGACAAGATTGTGATACGGGGT 59.430 45.455 2.31 0.00 42.43 4.95
3139 4286 2.936498 GACAAGATTGTGATACGGGGTG 59.064 50.000 2.31 0.00 42.43 4.61
3140 4287 2.569853 ACAAGATTGTGATACGGGGTGA 59.430 45.455 0.00 0.00 40.49 4.02
3228 4375 5.007385 ACTTCGACGATTTTATAGGTGCT 57.993 39.130 0.00 0.00 0.00 4.40
3231 4378 3.554324 TCGACGATTTTATAGGTGCTTGC 59.446 43.478 0.00 0.00 0.00 4.01
3232 4379 3.308595 CGACGATTTTATAGGTGCTTGCA 59.691 43.478 0.00 0.00 0.00 4.08
3234 4381 5.636837 GACGATTTTATAGGTGCTTGCAAA 58.363 37.500 0.00 0.00 0.00 3.68
3238 4385 4.734398 TTTATAGGTGCTTGCAAATGGG 57.266 40.909 0.00 0.00 0.00 4.00
3239 4386 0.826062 ATAGGTGCTTGCAAATGGGC 59.174 50.000 0.00 0.32 0.00 5.36
3240 4387 0.541530 TAGGTGCTTGCAAATGGGCA 60.542 50.000 6.97 6.97 43.19 5.36
3241 4388 1.196104 AGGTGCTTGCAAATGGGCAT 61.196 50.000 13.41 0.00 44.48 4.40
3242 4389 0.321830 GGTGCTTGCAAATGGGCATT 60.322 50.000 13.41 0.00 44.48 3.56
3243 4390 1.081094 GTGCTTGCAAATGGGCATTC 58.919 50.000 13.41 0.00 44.48 2.67
3244 4391 0.036199 TGCTTGCAAATGGGCATTCC 60.036 50.000 6.97 0.00 44.48 3.01
3245 4392 0.251073 GCTTGCAAATGGGCATTCCT 59.749 50.000 0.00 0.00 44.48 3.36
3246 4393 1.741394 GCTTGCAAATGGGCATTCCTC 60.741 52.381 0.00 0.00 44.48 3.71
3247 4394 0.531657 TTGCAAATGGGCATTCCTCG 59.468 50.000 0.00 0.00 44.48 4.63
3248 4395 0.611618 TGCAAATGGGCATTCCTCGT 60.612 50.000 0.00 0.00 39.25 4.18
3249 4396 1.340502 TGCAAATGGGCATTCCTCGTA 60.341 47.619 0.00 0.00 39.25 3.43
3250 4397 1.956477 GCAAATGGGCATTCCTCGTAT 59.044 47.619 0.00 0.00 36.20 3.06
3251 4398 3.146066 GCAAATGGGCATTCCTCGTATA 58.854 45.455 0.00 0.00 36.20 1.47
3252 4399 3.758554 GCAAATGGGCATTCCTCGTATAT 59.241 43.478 0.00 0.00 36.20 0.86
3253 4400 4.218417 GCAAATGGGCATTCCTCGTATATT 59.782 41.667 0.00 0.00 36.20 1.28
3254 4401 5.414454 GCAAATGGGCATTCCTCGTATATTA 59.586 40.000 0.00 0.00 36.20 0.98
3255 4402 6.622896 GCAAATGGGCATTCCTCGTATATTAC 60.623 42.308 0.00 0.00 36.20 1.89
3288 4457 5.713792 TTCAGTCACTTGTCTAGAAGGAG 57.286 43.478 0.00 0.00 0.00 3.69
3323 4492 3.766591 ACACCAGAGTACTTCAGGAGATG 59.233 47.826 13.99 6.51 36.06 2.90
3364 4533 4.516321 TCTCATTGTTCCTGTGTGTCAATG 59.484 41.667 9.10 9.10 43.47 2.82
3402 4571 5.726980 ATTTACCTGTTCACCGTGTACTA 57.273 39.130 9.39 0.00 0.00 1.82
3451 4620 2.420022 CCATGATCCGTGTCTTGGAAAC 59.580 50.000 11.52 0.00 42.85 2.78
3462 4631 3.119884 TGTCTTGGAAACGCATATTGCAG 60.120 43.478 0.00 0.00 45.36 4.41
3486 4655 0.537188 TTGGGAGCGTCCTCTTCATC 59.463 55.000 4.41 0.00 38.21 2.92
3528 4697 2.752903 AGCTGTTTCGTTGTTTTGAGGT 59.247 40.909 0.00 0.00 0.00 3.85
3559 4732 1.159285 CATGTGTGCACTACAGGGTG 58.841 55.000 19.41 11.59 40.69 4.61
3578 4751 4.336433 GGGTGGTGATCAATACTTGTGATG 59.664 45.833 0.00 0.00 35.84 3.07
3580 4753 4.943705 GTGGTGATCAATACTTGTGATGGT 59.056 41.667 0.00 0.00 35.84 3.55
3589 4762 8.023021 TCAATACTTGTGATGGTAGAAGCTAT 57.977 34.615 0.00 0.00 0.00 2.97
3590 4763 8.486210 TCAATACTTGTGATGGTAGAAGCTATT 58.514 33.333 0.00 0.00 0.00 1.73
3591 4764 9.113838 CAATACTTGTGATGGTAGAAGCTATTT 57.886 33.333 0.00 0.00 0.00 1.40
3669 4842 6.046593 CGTATTAGAAGTTGATTAGGTGGCA 58.953 40.000 0.00 0.00 0.00 4.92
3695 4868 6.588204 TGGAGCGTATATAAATGGTGTTCTT 58.412 36.000 0.00 0.00 0.00 2.52
3722 4895 4.641989 AGCAACATCCATGTCTTTATCACC 59.358 41.667 0.00 0.00 40.80 4.02
3760 4933 8.128582 TCATTACTGTTTTAAGCAAGACAACAG 58.871 33.333 10.84 10.84 46.50 3.16
3773 4946 3.470645 GACAACAGGGTGTCTTGTACT 57.529 47.619 10.13 0.00 43.82 2.73
3774 4947 3.131396 GACAACAGGGTGTCTTGTACTG 58.869 50.000 10.13 0.00 43.82 2.74
3798 4971 1.636988 GCAGCACTTTCATTGGCATC 58.363 50.000 0.00 0.00 0.00 3.91
3800 4973 2.418197 GCAGCACTTTCATTGGCATCAT 60.418 45.455 0.00 0.00 0.00 2.45
3808 4981 0.949397 CATTGGCATCATACGCTGCT 59.051 50.000 0.00 0.00 38.45 4.24
3853 5027 0.645868 GACGCAATTCGGTAGCACTC 59.354 55.000 0.00 0.00 43.86 3.51
3861 5035 5.701290 GCAATTCGGTAGCACTCCTTTATAT 59.299 40.000 0.00 0.00 0.00 0.86
3862 5036 6.347725 GCAATTCGGTAGCACTCCTTTATATG 60.348 42.308 0.00 0.00 0.00 1.78
3863 5037 5.864418 TTCGGTAGCACTCCTTTATATGT 57.136 39.130 0.00 0.00 0.00 2.29
3864 5038 6.964807 TTCGGTAGCACTCCTTTATATGTA 57.035 37.500 0.00 0.00 0.00 2.29
3865 5039 7.534723 TTCGGTAGCACTCCTTTATATGTAT 57.465 36.000 0.00 0.00 0.00 2.29
3963 5137 1.583495 GCTTGGACGGTTGTTAGCCC 61.583 60.000 0.00 0.00 0.00 5.19
4062 5236 6.638610 ACCTTGTTGTCTAAGATCTGAGATG 58.361 40.000 13.20 0.89 0.00 2.90
4063 5237 6.047870 CCTTGTTGTCTAAGATCTGAGATGG 58.952 44.000 13.20 5.68 0.00 3.51
4081 5255 1.214325 GTGGCAATACCGGGTTTGC 59.786 57.895 26.63 26.63 45.82 3.68
4087 5261 2.561569 CAATACCGGGTTTGCTAGAGG 58.438 52.381 4.31 0.00 0.00 3.69
4093 5267 2.418334 CCGGGTTTGCTAGAGGAACTAC 60.418 54.545 0.00 0.00 41.55 2.73
4104 5278 6.490040 TGCTAGAGGAACTACATTTGCTTTTT 59.510 34.615 0.00 0.00 41.55 1.94
4105 5279 6.803807 GCTAGAGGAACTACATTTGCTTTTTG 59.196 38.462 0.00 0.00 41.55 2.44
4124 5298 3.208747 TGTTGAAGTTTGGAGGAGACC 57.791 47.619 0.00 0.00 0.00 3.85
4254 5428 3.947841 CGGCGCCGAGAGAGAGAG 61.948 72.222 44.86 10.04 42.83 3.20
4255 5429 3.591835 GGCGCCGAGAGAGAGAGG 61.592 72.222 12.58 0.00 0.00 3.69
4256 5430 3.591835 GCGCCGAGAGAGAGAGGG 61.592 72.222 0.00 0.00 0.00 4.30
4257 5431 2.190843 CGCCGAGAGAGAGAGGGA 59.809 66.667 0.00 0.00 0.00 4.20
4258 5432 1.891919 CGCCGAGAGAGAGAGGGAG 60.892 68.421 0.00 0.00 0.00 4.30
4259 5433 1.529796 GCCGAGAGAGAGAGGGAGA 59.470 63.158 0.00 0.00 0.00 3.71
4260 5434 0.535102 GCCGAGAGAGAGAGGGAGAG 60.535 65.000 0.00 0.00 0.00 3.20
4376 5553 6.415573 TCCCTTCATCATCATCATCATCATC 58.584 40.000 0.00 0.00 0.00 2.92
4377 5554 6.012858 TCCCTTCATCATCATCATCATCATCA 60.013 38.462 0.00 0.00 0.00 3.07
4378 5555 6.830838 CCCTTCATCATCATCATCATCATCAT 59.169 38.462 0.00 0.00 0.00 2.45
4426 5603 7.099764 CCTGATCGATGGCAAATATTAGTACT 58.900 38.462 0.54 0.00 0.00 2.73
4502 5690 3.990469 CGCTTCTGCTATCATTTCCGTAT 59.010 43.478 0.00 0.00 36.97 3.06
4503 5691 5.048294 TCGCTTCTGCTATCATTTCCGTATA 60.048 40.000 0.00 0.00 36.97 1.47
4527 5717 5.467063 ACATCTCTGAAAAACCTCGTTTCTC 59.533 40.000 0.00 0.00 34.43 2.87
4556 5754 3.124921 CCGCCGTTGAAATCCGCT 61.125 61.111 0.00 0.00 0.00 5.52
4560 5758 1.084289 GCCGTTGAAATCCGCTAGTT 58.916 50.000 0.00 0.00 0.00 2.24
4562 5760 2.343101 CCGTTGAAATCCGCTAGTTCA 58.657 47.619 0.00 0.00 40.25 3.18
4563 5761 2.936498 CCGTTGAAATCCGCTAGTTCAT 59.064 45.455 0.57 0.00 41.47 2.57
4564 5762 3.242413 CCGTTGAAATCCGCTAGTTCATG 60.242 47.826 0.57 0.00 41.47 3.07
4565 5763 3.616821 CGTTGAAATCCGCTAGTTCATGA 59.383 43.478 0.00 0.00 41.47 3.07
4566 5764 4.092821 CGTTGAAATCCGCTAGTTCATGAA 59.907 41.667 3.38 3.38 41.47 2.57
4581 5779 1.037030 ATGAAATGAATGGCCGGCGT 61.037 50.000 22.54 9.05 0.00 5.68
4582 5780 1.247419 TGAAATGAATGGCCGGCGTT 61.247 50.000 22.54 18.14 0.00 4.84
4598 5796 1.537990 GCGTTGGTTCATGTTTGCCTT 60.538 47.619 0.00 0.00 0.00 4.35
4660 5861 4.598257 CGATCCACCGCTGTTTCT 57.402 55.556 0.00 0.00 0.00 2.52
4685 5936 4.947147 TTGGCTTTCGGCTGGCGT 62.947 61.111 23.07 0.00 41.46 5.68
4693 5944 3.121030 CGGCTGGCGTCTTTGGAG 61.121 66.667 16.07 0.00 0.00 3.86
4695 5946 2.747855 GCTGGCGTCTTTGGAGGG 60.748 66.667 0.00 0.00 0.00 4.30
4700 5951 1.677552 GCGTCTTTGGAGGGAAGGA 59.322 57.895 0.00 0.00 0.00 3.36
4701 5952 0.391793 GCGTCTTTGGAGGGAAGGAG 60.392 60.000 0.00 0.00 0.00 3.69
4702 5953 0.250513 CGTCTTTGGAGGGAAGGAGG 59.749 60.000 0.00 0.00 0.00 4.30
4703 5954 0.621082 GTCTTTGGAGGGAAGGAGGG 59.379 60.000 0.00 0.00 0.00 4.30
4712 5963 0.253207 GGGAAGGAGGGAAGGAAGGA 60.253 60.000 0.00 0.00 0.00 3.36
4713 5964 0.913205 GGAAGGAGGGAAGGAAGGAC 59.087 60.000 0.00 0.00 0.00 3.85
4747 5998 0.179018 GCGGGACAAGGAAGGCATAT 60.179 55.000 0.00 0.00 0.00 1.78
4748 5999 1.071699 GCGGGACAAGGAAGGCATATA 59.928 52.381 0.00 0.00 0.00 0.86
4749 6000 2.767505 CGGGACAAGGAAGGCATATAC 58.232 52.381 0.00 0.00 0.00 1.47
4802 6053 3.958860 GCGGGGAGGGATGGGATG 61.959 72.222 0.00 0.00 0.00 3.51
4873 6129 9.397280 TCGTCGGAATCATCTATCTATCTAAAT 57.603 33.333 0.00 0.00 0.00 1.40
4939 6195 2.146519 CACGCTGCTGTCGACGTAG 61.147 63.158 11.62 14.70 36.91 3.51
4956 6212 4.243270 ACGTAGTAATTGTTGTGAGAGCC 58.757 43.478 0.00 0.00 41.94 4.70
4957 6213 4.021368 ACGTAGTAATTGTTGTGAGAGCCT 60.021 41.667 0.00 0.00 41.94 4.58
4958 6214 5.184479 ACGTAGTAATTGTTGTGAGAGCCTA 59.816 40.000 0.00 0.00 41.94 3.93
4959 6215 5.515626 CGTAGTAATTGTTGTGAGAGCCTAC 59.484 44.000 0.00 0.00 0.00 3.18
4960 6216 5.746990 AGTAATTGTTGTGAGAGCCTACT 57.253 39.130 0.00 0.00 0.00 2.57
4961 6217 5.725362 AGTAATTGTTGTGAGAGCCTACTC 58.275 41.667 0.00 0.00 43.82 2.59
4962 6218 3.618690 ATTGTTGTGAGAGCCTACTCC 57.381 47.619 0.00 0.00 44.65 3.85
4992 6248 0.168788 GCAGTACCGTGTACGCACTA 59.831 55.000 7.29 0.00 43.16 2.74
4996 6252 2.932614 AGTACCGTGTACGCACTAGTAG 59.067 50.000 7.29 0.00 43.16 2.57
5000 6256 1.531912 GTGTACGCACTAGTAGCACG 58.468 55.000 14.77 10.06 42.13 5.34
5001 6257 0.448990 TGTACGCACTAGTAGCACGG 59.551 55.000 14.70 4.49 0.00 4.94
5002 6258 0.449388 GTACGCACTAGTAGCACGGT 59.551 55.000 14.70 8.78 0.00 4.83
5003 6259 1.665679 GTACGCACTAGTAGCACGGTA 59.334 52.381 14.70 8.06 0.00 4.02
5004 6260 1.386533 ACGCACTAGTAGCACGGTAT 58.613 50.000 14.70 0.00 0.00 2.73
5005 6261 2.564771 ACGCACTAGTAGCACGGTATA 58.435 47.619 14.70 0.00 0.00 1.47
5006 6262 3.144506 ACGCACTAGTAGCACGGTATAT 58.855 45.455 14.70 0.00 0.00 0.86
5007 6263 3.058432 ACGCACTAGTAGCACGGTATATG 60.058 47.826 14.70 0.00 0.00 1.78
5008 6264 3.058432 CGCACTAGTAGCACGGTATATGT 60.058 47.826 14.77 0.00 0.00 2.29
5009 6265 4.152938 CGCACTAGTAGCACGGTATATGTA 59.847 45.833 14.77 0.00 0.00 2.29
5010 6266 5.163784 CGCACTAGTAGCACGGTATATGTAT 60.164 44.000 14.77 0.00 0.00 2.29
5011 6267 6.028368 GCACTAGTAGCACGGTATATGTATG 58.972 44.000 11.05 0.00 0.00 2.39
5012 6268 6.552629 CACTAGTAGCACGGTATATGTATGG 58.447 44.000 0.00 0.00 0.00 2.74
5013 6269 4.451629 AGTAGCACGGTATATGTATGGC 57.548 45.455 0.00 0.00 0.00 4.40
5014 6270 2.762535 AGCACGGTATATGTATGGCC 57.237 50.000 0.00 0.00 0.00 5.36
5015 6271 1.278127 AGCACGGTATATGTATGGCCC 59.722 52.381 0.00 0.00 0.00 5.80
5016 6272 2.004583 CACGGTATATGTATGGCCCG 57.995 55.000 0.00 0.00 41.09 6.13
5017 6273 1.636148 ACGGTATATGTATGGCCCGT 58.364 50.000 0.00 0.00 43.29 5.28
5018 6274 2.492881 CACGGTATATGTATGGCCCGTA 59.507 50.000 0.00 0.00 46.04 4.02
5019 6275 2.756760 ACGGTATATGTATGGCCCGTAG 59.243 50.000 0.00 0.00 45.94 3.51
5020 6276 3.018856 CGGTATATGTATGGCCCGTAGA 58.981 50.000 0.00 0.00 0.00 2.59
5021 6277 3.635373 CGGTATATGTATGGCCCGTAGAT 59.365 47.826 0.00 0.00 0.00 1.98
5022 6278 4.261489 CGGTATATGTATGGCCCGTAGATC 60.261 50.000 0.00 0.00 0.00 2.75
5023 6279 4.894114 GGTATATGTATGGCCCGTAGATCT 59.106 45.833 0.00 0.00 0.00 2.75
5024 6280 5.221263 GGTATATGTATGGCCCGTAGATCTG 60.221 48.000 5.18 0.00 0.00 2.90
5025 6281 1.338107 TGTATGGCCCGTAGATCTGG 58.662 55.000 5.18 0.00 0.00 3.86
5026 6282 1.133294 TGTATGGCCCGTAGATCTGGA 60.133 52.381 5.18 0.00 0.00 3.86
5027 6283 2.180276 GTATGGCCCGTAGATCTGGAT 58.820 52.381 5.18 0.00 0.00 3.41
5028 6284 1.270907 ATGGCCCGTAGATCTGGATC 58.729 55.000 5.18 2.63 38.09 3.36
5029 6285 1.179174 TGGCCCGTAGATCTGGATCG 61.179 60.000 5.18 5.11 42.48 3.69
5030 6286 1.587054 GCCCGTAGATCTGGATCGG 59.413 63.158 5.18 13.31 42.48 4.18
5031 6287 1.587054 CCCGTAGATCTGGATCGGC 59.413 63.158 18.29 2.33 42.48 5.54
5032 6288 1.210413 CCGTAGATCTGGATCGGCG 59.790 63.158 5.18 0.00 42.48 6.46
5033 6289 1.442857 CGTAGATCTGGATCGGCGC 60.443 63.158 5.18 0.00 42.48 6.53
5034 6290 1.080434 GTAGATCTGGATCGGCGCC 60.080 63.158 19.07 19.07 42.48 6.53
5035 6291 2.626780 TAGATCTGGATCGGCGCCG 61.627 63.158 42.13 42.13 42.48 6.46
5055 6311 3.470567 CGTGTCCGACGCAAGAGC 61.471 66.667 12.43 0.00 42.21 4.09
5056 6312 3.112709 GTGTCCGACGCAAGAGCC 61.113 66.667 7.22 0.00 43.62 4.70
5057 6313 3.611674 TGTCCGACGCAAGAGCCA 61.612 61.111 0.00 0.00 43.62 4.75
5058 6314 2.125512 GTCCGACGCAAGAGCCAT 60.126 61.111 0.00 0.00 43.62 4.40
5059 6315 1.141019 GTCCGACGCAAGAGCCATA 59.859 57.895 0.00 0.00 43.62 2.74
5060 6316 1.141019 TCCGACGCAAGAGCCATAC 59.859 57.895 0.00 0.00 43.62 2.39
5061 6317 1.883084 CCGACGCAAGAGCCATACC 60.883 63.158 0.00 0.00 43.62 2.73
5062 6318 2.230940 CGACGCAAGAGCCATACCG 61.231 63.158 0.00 0.00 43.62 4.02
5063 6319 1.153628 GACGCAAGAGCCATACCGT 60.154 57.895 0.00 0.00 43.62 4.83
5064 6320 0.101759 GACGCAAGAGCCATACCGTA 59.898 55.000 0.00 0.00 43.62 4.02
5065 6321 0.179119 ACGCAAGAGCCATACCGTAC 60.179 55.000 0.00 0.00 43.62 3.67
5066 6322 1.206745 CGCAAGAGCCATACCGTACG 61.207 60.000 8.69 8.69 43.02 3.67
5067 6323 0.179119 GCAAGAGCCATACCGTACGT 60.179 55.000 15.21 5.08 33.58 3.57
5068 6324 1.066002 GCAAGAGCCATACCGTACGTA 59.934 52.381 15.21 7.24 33.58 3.57
5069 6325 2.857489 GCAAGAGCCATACCGTACGTAG 60.857 54.545 15.21 1.90 33.58 3.51
5070 6326 5.335600 GCAAGAGCCATACCGTACGTAGT 62.336 52.174 15.21 8.45 38.95 2.73
5071 6327 2.648059 AGAGCCATACCGTACGTAGTT 58.352 47.619 15.21 0.00 37.78 2.24
5072 6328 3.019564 AGAGCCATACCGTACGTAGTTT 58.980 45.455 15.21 0.00 37.78 2.66
5073 6329 3.445096 AGAGCCATACCGTACGTAGTTTT 59.555 43.478 15.21 0.00 37.78 2.43
5074 6330 4.082026 AGAGCCATACCGTACGTAGTTTTT 60.082 41.667 15.21 0.00 37.78 1.94
5091 6347 0.038599 TTTTCCCCGAAACCTAGGGC 59.961 55.000 14.81 0.84 46.24 5.19
5092 6348 0.843343 TTTCCCCGAAACCTAGGGCT 60.843 55.000 14.81 0.00 46.24 5.19
5093 6349 1.269703 TTCCCCGAAACCTAGGGCTC 61.270 60.000 14.81 8.00 46.24 4.70
5094 6350 2.743179 CCCCGAAACCTAGGGCTCC 61.743 68.421 14.81 0.00 46.24 4.70
5095 6351 2.743179 CCCGAAACCTAGGGCTCCC 61.743 68.421 14.81 0.00 41.34 4.30
5096 6352 2.743179 CCGAAACCTAGGGCTCCCC 61.743 68.421 14.81 0.00 45.90 4.81
5115 6371 4.807039 GCGGCGCTAGGGTTTCGA 62.807 66.667 26.86 0.00 0.00 3.71
5116 6372 2.884207 CGGCGCTAGGGTTTCGAC 60.884 66.667 7.64 0.00 0.00 4.20
5117 6373 2.884207 GGCGCTAGGGTTTCGACG 60.884 66.667 7.64 0.00 0.00 5.12
5118 6374 2.126189 GCGCTAGGGTTTCGACGT 60.126 61.111 8.77 0.00 0.00 4.34
5119 6375 2.442188 GCGCTAGGGTTTCGACGTG 61.442 63.158 8.77 0.00 0.00 4.49
5120 6376 1.804326 CGCTAGGGTTTCGACGTGG 60.804 63.158 0.00 0.00 0.00 4.94
5121 6377 1.588082 GCTAGGGTTTCGACGTGGA 59.412 57.895 0.00 0.00 0.00 4.02
5122 6378 0.037975 GCTAGGGTTTCGACGTGGAA 60.038 55.000 9.09 9.09 0.00 3.53
5123 6379 1.606224 GCTAGGGTTTCGACGTGGAAA 60.606 52.381 20.05 20.05 33.73 3.13
5127 6383 2.592212 GTTTCGACGTGGAAACCGA 58.408 52.632 33.30 16.17 46.32 4.69
5128 6384 1.142474 GTTTCGACGTGGAAACCGAT 58.858 50.000 33.30 0.00 46.32 4.18
5129 6385 1.125566 GTTTCGACGTGGAAACCGATC 59.874 52.381 33.30 16.63 46.32 3.69
5130 6386 0.730155 TTCGACGTGGAAACCGATCG 60.730 55.000 10.81 8.51 33.61 3.69
5131 6387 2.156446 CGACGTGGAAACCGATCGG 61.156 63.158 32.20 32.20 42.03 4.18
5132 6388 2.433664 ACGTGGAAACCGATCGGC 60.434 61.111 33.62 17.76 39.32 5.54
5133 6389 3.550992 CGTGGAAACCGATCGGCG 61.551 66.667 33.62 22.81 39.32 6.46
5156 6412 4.688966 GGATCTCATCGGCGGGCC 62.689 72.222 7.21 0.00 0.00 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 6.926313 ACTTGGTAGACTTGTCAAGAGATAC 58.074 40.000 19.53 15.76 38.96 2.24
23 24 8.824756 ATACTTGGTAGACTTGTCAAGAGATA 57.175 34.615 19.53 5.93 38.96 1.98
72 74 4.426736 TTGGAGTTAAGGAAAAGGACGT 57.573 40.909 0.00 0.00 0.00 4.34
111 114 0.386113 TGGTGATTGACGTGTCGACA 59.614 50.000 15.76 15.76 0.00 4.35
113 116 2.734175 GCTATGGTGATTGACGTGTCGA 60.734 50.000 0.00 0.00 0.00 4.20
177 181 2.649531 TCGGATGGTGTTTTCAAGGT 57.350 45.000 0.00 0.00 0.00 3.50
218 222 5.491323 TCAAGAAAAGTTGGTGGGTTTTT 57.509 34.783 0.00 0.00 0.00 1.94
219 223 5.491323 TTCAAGAAAAGTTGGTGGGTTTT 57.509 34.783 0.00 0.00 0.00 2.43
220 224 5.221742 TGTTTCAAGAAAAGTTGGTGGGTTT 60.222 36.000 0.00 0.00 31.33 3.27
221 225 4.284746 TGTTTCAAGAAAAGTTGGTGGGTT 59.715 37.500 0.00 0.00 31.33 4.11
291 295 8.036273 TTTCTAGACGAAATTATGGGACAAAC 57.964 34.615 0.00 0.00 38.23 2.93
317 321 6.885918 TGAACTCAATCATGTACCATCAACAT 59.114 34.615 0.00 0.00 38.08 2.71
376 380 0.394352 ACCTGCATTCACCGGATTCC 60.394 55.000 9.46 0.00 0.00 3.01
381 385 1.338674 TGTCTTACCTGCATTCACCGG 60.339 52.381 0.00 0.00 0.00 5.28
387 391 5.072741 AGATGTTTGTGTCTTACCTGCATT 58.927 37.500 0.00 0.00 0.00 3.56
404 408 6.369065 GGTAACTTCGTCAATCTCAAGATGTT 59.631 38.462 0.00 0.00 34.49 2.71
426 430 1.317431 ACTACGAGGCGCATGTGGTA 61.317 55.000 10.83 3.30 0.00 3.25
435 439 0.245539 TTTCCCTTGACTACGAGGCG 59.754 55.000 0.00 0.00 44.27 5.52
457 461 5.057149 CGATATTTGTTCAGTAAGGGGAGG 58.943 45.833 0.00 0.00 0.00 4.30
462 466 4.116961 TCGGCGATATTTGTTCAGTAAGG 58.883 43.478 4.99 0.00 0.00 2.69
465 469 5.163834 GGTTTTCGGCGATATTTGTTCAGTA 60.164 40.000 11.76 0.00 0.00 2.74
474 478 0.178533 TCGGGGTTTTCGGCGATATT 59.821 50.000 11.76 0.00 0.00 1.28
483 487 7.773864 TTTTCTGTTTTATTTCGGGGTTTTC 57.226 32.000 0.00 0.00 0.00 2.29
488 492 7.306953 TCGTATTTTTCTGTTTTATTTCGGGG 58.693 34.615 0.00 0.00 0.00 5.73
491 495 8.355806 GTGCTCGTATTTTTCTGTTTTATTTCG 58.644 33.333 0.00 0.00 0.00 3.46
512 517 1.421410 CGGACGTGCCAATAGTGCTC 61.421 60.000 0.00 0.00 35.94 4.26
523 528 0.041576 GGTTGAAGTTTCGGACGTGC 60.042 55.000 0.00 0.00 0.00 5.34
526 531 1.263217 CCAAGGTTGAAGTTTCGGACG 59.737 52.381 0.00 0.00 0.00 4.79
529 534 0.040425 CGCCAAGGTTGAAGTTTCGG 60.040 55.000 0.00 0.00 0.00 4.30
530 535 0.661020 ACGCCAAGGTTGAAGTTTCG 59.339 50.000 0.00 0.00 0.00 3.46
543 548 3.587933 GCGGAACCAACACGCCAA 61.588 61.111 0.00 0.00 46.92 4.52
565 571 6.951971 GCATACCTCATATGGTTAGATCCTT 58.048 40.000 2.13 0.00 41.07 3.36
575 581 5.174395 GTGAGCTAAGCATACCTCATATGG 58.826 45.833 2.13 0.00 41.07 2.74
584 590 8.331742 GTCTTTAAGATTGTGAGCTAAGCATAC 58.668 37.037 0.00 0.00 0.00 2.39
587 593 6.147821 GTGTCTTTAAGATTGTGAGCTAAGCA 59.852 38.462 0.00 0.00 0.00 3.91
591 597 9.424319 CTTAAGTGTCTTTAAGATTGTGAGCTA 57.576 33.333 0.00 0.00 41.17 3.32
634 642 1.058404 GCTTGGTACGTCGAACTGTC 58.942 55.000 0.00 0.00 0.00 3.51
636 644 0.038526 AGGCTTGGTACGTCGAACTG 60.039 55.000 0.00 0.00 0.00 3.16
638 646 1.069378 CGAGGCTTGGTACGTCGAAC 61.069 60.000 0.00 0.00 45.50 3.95
677 685 6.572519 TGATTCGGGATGGAAAATGATTTTC 58.427 36.000 19.57 19.57 46.36 2.29
678 686 6.543430 TGATTCGGGATGGAAAATGATTTT 57.457 33.333 2.27 2.27 35.12 1.82
679 687 6.324512 TCATGATTCGGGATGGAAAATGATTT 59.675 34.615 0.00 0.00 32.57 2.17
680 688 5.834742 TCATGATTCGGGATGGAAAATGATT 59.165 36.000 0.00 0.00 32.57 2.57
681 689 5.242393 GTCATGATTCGGGATGGAAAATGAT 59.758 40.000 0.00 0.00 36.40 2.45
682 690 4.580167 GTCATGATTCGGGATGGAAAATGA 59.420 41.667 0.00 0.00 33.90 2.57
683 691 4.338964 TGTCATGATTCGGGATGGAAAATG 59.661 41.667 0.00 0.00 0.00 2.32
684 692 4.535781 TGTCATGATTCGGGATGGAAAAT 58.464 39.130 0.00 0.00 0.00 1.82
685 693 3.961849 TGTCATGATTCGGGATGGAAAA 58.038 40.909 0.00 0.00 0.00 2.29
686 694 3.643199 TGTCATGATTCGGGATGGAAA 57.357 42.857 0.00 0.00 0.00 3.13
687 695 3.862877 ATGTCATGATTCGGGATGGAA 57.137 42.857 0.00 0.00 0.00 3.53
688 696 4.286808 ACATATGTCATGATTCGGGATGGA 59.713 41.667 1.41 0.00 0.00 3.41
689 697 4.582869 ACATATGTCATGATTCGGGATGG 58.417 43.478 1.41 0.00 0.00 3.51
690 698 4.328169 CGACATATGTCATGATTCGGGATG 59.672 45.833 30.15 9.72 44.99 3.51
691 699 4.220602 TCGACATATGTCATGATTCGGGAT 59.779 41.667 30.15 0.00 44.99 3.85
692 700 3.572255 TCGACATATGTCATGATTCGGGA 59.428 43.478 30.15 15.82 44.99 5.14
693 701 3.913089 TCGACATATGTCATGATTCGGG 58.087 45.455 30.15 14.02 44.99 5.14
694 702 6.471976 AAATCGACATATGTCATGATTCGG 57.528 37.500 30.15 14.64 44.99 4.30
699 707 9.942850 ACCATATAAAATCGACATATGTCATGA 57.057 29.630 30.15 21.76 44.99 3.07
702 710 9.214957 GGAACCATATAAAATCGACATATGTCA 57.785 33.333 30.15 19.52 44.99 3.58
748 791 1.670083 GGTACACTTGTCACGGGGC 60.670 63.158 0.00 0.00 0.00 5.80
783 826 1.926108 AGGACGGCTAGATACCATCC 58.074 55.000 0.00 0.00 0.00 3.51
788 831 8.976471 GTATTAAAGAAAAGGACGGCTAGATAC 58.024 37.037 0.00 0.00 0.00 2.24
827 870 2.263077 GACATGTCGTCACCATCAGAC 58.737 52.381 10.69 0.00 44.69 3.51
840 1702 6.058183 AGGAGCTTATGGTAATTGACATGTC 58.942 40.000 19.27 19.27 0.00 3.06
851 1713 1.414538 CCTGGGGAGGAGCTTATGGTA 60.415 57.143 0.00 0.00 0.00 3.25
865 1727 1.985895 AGTGAGTTACTTTCCCTGGGG 59.014 52.381 14.00 2.42 35.67 4.96
881 1743 2.027745 GGAGATTCCTGCTTGACAGTGA 60.028 50.000 0.00 0.00 45.68 3.41
901 1763 2.046285 GTTCAAGATGGGCCGGTGG 61.046 63.158 1.90 0.00 0.00 4.61
906 1768 7.154656 GGAAATATAATTGTTCAAGATGGGCC 58.845 38.462 0.00 0.00 0.00 5.80
927 1789 3.634910 GGCAGGAGTAACAAAACTGGAAA 59.365 43.478 0.00 0.00 0.00 3.13
945 1807 4.212214 GGCGAATTAGACATAGAAAGGCAG 59.788 45.833 0.00 0.00 0.00 4.85
947 1809 4.024809 GTGGCGAATTAGACATAGAAAGGC 60.025 45.833 0.00 0.00 0.00 4.35
948 1810 5.360591 AGTGGCGAATTAGACATAGAAAGG 58.639 41.667 0.00 0.00 0.00 3.11
949 1811 6.313905 ACAAGTGGCGAATTAGACATAGAAAG 59.686 38.462 0.00 0.00 0.00 2.62
950 1812 6.092122 CACAAGTGGCGAATTAGACATAGAAA 59.908 38.462 0.00 0.00 0.00 2.52
951 1813 5.580691 CACAAGTGGCGAATTAGACATAGAA 59.419 40.000 0.00 0.00 0.00 2.10
952 1814 5.109210 CACAAGTGGCGAATTAGACATAGA 58.891 41.667 0.00 0.00 0.00 1.98
953 1815 4.271049 CCACAAGTGGCGAATTAGACATAG 59.729 45.833 6.27 0.00 44.73 2.23
954 1816 4.188462 CCACAAGTGGCGAATTAGACATA 58.812 43.478 6.27 0.00 44.73 2.29
955 1817 3.009723 CCACAAGTGGCGAATTAGACAT 58.990 45.455 6.27 0.00 44.73 3.06
956 1818 2.422597 CCACAAGTGGCGAATTAGACA 58.577 47.619 6.27 0.00 44.73 3.41
968 1830 0.106719 ACCACCTCCAACCACAAGTG 60.107 55.000 0.00 0.00 0.00 3.16
969 1831 1.142262 GTACCACCTCCAACCACAAGT 59.858 52.381 0.00 0.00 0.00 3.16
970 1832 1.142060 TGTACCACCTCCAACCACAAG 59.858 52.381 0.00 0.00 0.00 3.16
971 1833 1.214217 TGTACCACCTCCAACCACAA 58.786 50.000 0.00 0.00 0.00 3.33
985 1847 3.859961 CGACACATCACTCATCTTGTACC 59.140 47.826 0.00 0.00 0.00 3.34
986 1848 3.304559 GCGACACATCACTCATCTTGTAC 59.695 47.826 0.00 0.00 0.00 2.90
993 1855 3.020274 ACTAGAGCGACACATCACTCAT 58.980 45.455 0.00 0.00 36.61 2.90
994 1856 2.420372 GACTAGAGCGACACATCACTCA 59.580 50.000 0.00 0.00 36.61 3.41
1016 1878 3.130340 CCATACCATGGCTACAAAACCAC 59.870 47.826 13.04 0.00 44.70 4.16
1047 1909 1.643868 CGGAGCGGCATACAAAGCAA 61.644 55.000 1.45 0.00 0.00 3.91
1054 1916 0.859232 CATACAACGGAGCGGCATAC 59.141 55.000 1.45 0.00 0.00 2.39
1065 1927 6.647212 AGTGACAATATGACACATACAACG 57.353 37.500 13.66 0.00 43.56 4.10
1073 1937 8.932945 TCATAGAAGAAGTGACAATATGACAC 57.067 34.615 5.08 5.08 41.95 3.67
1084 1948 7.142021 GCGTATCAGATTCATAGAAGAAGTGA 58.858 38.462 0.00 0.00 32.32 3.41
1091 1955 6.183360 TGGAAAGGCGTATCAGATTCATAGAA 60.183 38.462 0.00 0.00 0.00 2.10
1156 2032 6.968263 TGGGACAAATTTGACTTTGATACA 57.032 33.333 24.64 7.19 38.17 2.29
1317 2301 0.885879 TATCGGTTGGGATCGATCGG 59.114 55.000 18.81 1.08 43.82 4.18
1324 2308 2.415983 TGGATCCTATCGGTTGGGAT 57.584 50.000 14.23 3.85 41.90 3.85
1325 2309 2.257207 GATGGATCCTATCGGTTGGGA 58.743 52.381 14.23 0.00 0.00 4.37
1326 2310 1.279271 GGATGGATCCTATCGGTTGGG 59.721 57.143 14.23 0.00 43.73 4.12
1327 2311 1.279271 GGGATGGATCCTATCGGTTGG 59.721 57.143 14.23 0.00 46.35 3.77
1328 2312 1.977854 TGGGATGGATCCTATCGGTTG 59.022 52.381 14.23 0.00 46.35 3.77
1329 2313 1.978580 GTGGGATGGATCCTATCGGTT 59.021 52.381 14.23 0.00 46.35 4.44
1330 2314 1.150135 AGTGGGATGGATCCTATCGGT 59.850 52.381 14.23 0.00 46.35 4.69
1331 2315 1.552337 CAGTGGGATGGATCCTATCGG 59.448 57.143 14.23 0.29 46.35 4.18
1332 2316 2.251818 ACAGTGGGATGGATCCTATCG 58.748 52.381 14.23 4.37 46.35 2.92
1333 2317 4.713792 AAACAGTGGGATGGATCCTATC 57.286 45.455 14.23 13.49 46.35 2.08
1334 2318 6.786843 ATAAAACAGTGGGATGGATCCTAT 57.213 37.500 14.23 4.81 46.35 2.57
1335 2319 6.272324 CCTATAAAACAGTGGGATGGATCCTA 59.728 42.308 14.23 0.00 46.35 2.94
1336 2320 5.073691 CCTATAAAACAGTGGGATGGATCCT 59.926 44.000 14.23 0.00 46.35 3.24
1337 2321 5.316987 CCTATAAAACAGTGGGATGGATCC 58.683 45.833 4.20 4.20 46.41 3.36
1338 2322 4.762251 GCCTATAAAACAGTGGGATGGATC 59.238 45.833 0.00 0.00 0.00 3.36
1339 2323 4.729868 GCCTATAAAACAGTGGGATGGAT 58.270 43.478 0.00 0.00 0.00 3.41
1340 2324 3.433031 CGCCTATAAAACAGTGGGATGGA 60.433 47.826 0.00 0.00 0.00 3.41
1341 2325 2.878406 CGCCTATAAAACAGTGGGATGG 59.122 50.000 0.00 0.00 0.00 3.51
1342 2326 2.290641 GCGCCTATAAAACAGTGGGATG 59.709 50.000 0.00 0.00 0.00 3.51
1343 2327 2.092646 TGCGCCTATAAAACAGTGGGAT 60.093 45.455 4.18 0.00 0.00 3.85
1344 2328 1.279558 TGCGCCTATAAAACAGTGGGA 59.720 47.619 4.18 0.00 0.00 4.37
1945 2940 1.798223 TCTCAAAATCAAGCGGTCACG 59.202 47.619 0.00 0.00 44.63 4.35
1946 2941 2.808543 AGTCTCAAAATCAAGCGGTCAC 59.191 45.455 0.00 0.00 0.00 3.67
1949 2944 2.427506 GGAGTCTCAAAATCAAGCGGT 58.572 47.619 1.47 0.00 0.00 5.68
1954 2949 3.126001 AGCACGGAGTCTCAAAATCAA 57.874 42.857 1.47 0.00 41.61 2.57
1967 2962 1.617018 CCTGGAGATGGAAGCACGGA 61.617 60.000 0.00 0.00 0.00 4.69
1971 2966 1.274703 GGGACCTGGAGATGGAAGCA 61.275 60.000 0.00 0.00 0.00 3.91
2117 3120 2.750888 GCCCTTGACGATGCGGTTC 61.751 63.158 0.00 0.00 0.00 3.62
2577 3580 4.841422 AGAAGATGTCAGGAGTGATTTGG 58.159 43.478 0.00 0.00 34.36 3.28
2583 3586 5.049167 GCTATGAAGAAGATGTCAGGAGTG 58.951 45.833 0.00 0.00 0.00 3.51
2612 3615 7.113965 GTCAAATTAGCCGCATTGAAATATCAG 59.886 37.037 0.00 0.00 36.78 2.90
2797 3900 2.304180 ACTCTCATGCTGTTGTAAGGCT 59.696 45.455 0.00 0.00 0.00 4.58
2986 4093 1.407936 TCAGATCCCTAGAGCACAGC 58.592 55.000 0.00 0.00 0.00 4.40
3055 4162 7.896383 TCTTGGACCTCATTAAATAATTGGG 57.104 36.000 0.00 4.36 0.00 4.12
3083 4230 1.063717 ACCATCAATCACCCCACATCC 60.064 52.381 0.00 0.00 0.00 3.51
3087 4234 1.185315 CCAACCATCAATCACCCCAC 58.815 55.000 0.00 0.00 0.00 4.61
3096 4243 4.133820 CAACTGTCAGTACCAACCATCAA 58.866 43.478 5.77 0.00 0.00 2.57
3097 4244 3.389656 TCAACTGTCAGTACCAACCATCA 59.610 43.478 5.77 0.00 0.00 3.07
3098 4245 3.746492 GTCAACTGTCAGTACCAACCATC 59.254 47.826 5.77 0.00 0.00 3.51
3099 4246 3.135712 TGTCAACTGTCAGTACCAACCAT 59.864 43.478 5.77 0.00 0.00 3.55
3100 4247 2.502130 TGTCAACTGTCAGTACCAACCA 59.498 45.455 5.77 0.00 0.00 3.67
3101 4248 3.188159 TGTCAACTGTCAGTACCAACC 57.812 47.619 5.77 0.00 0.00 3.77
3102 4249 4.439057 TCTTGTCAACTGTCAGTACCAAC 58.561 43.478 5.77 3.33 0.00 3.77
3103 4250 4.746535 TCTTGTCAACTGTCAGTACCAA 57.253 40.909 5.77 8.50 0.00 3.67
3104 4251 4.955811 ATCTTGTCAACTGTCAGTACCA 57.044 40.909 5.77 0.59 0.00 3.25
3105 4252 5.050091 CACAATCTTGTCAACTGTCAGTACC 60.050 44.000 5.77 0.00 39.91 3.34
3106 4253 5.753438 TCACAATCTTGTCAACTGTCAGTAC 59.247 40.000 5.77 2.28 39.91 2.73
3107 4254 5.912892 TCACAATCTTGTCAACTGTCAGTA 58.087 37.500 5.77 0.00 39.91 2.74
3108 4255 4.769688 TCACAATCTTGTCAACTGTCAGT 58.230 39.130 0.00 0.00 39.91 3.41
3109 4256 5.936686 ATCACAATCTTGTCAACTGTCAG 57.063 39.130 0.00 0.00 39.91 3.51
3110 4257 5.405269 CGTATCACAATCTTGTCAACTGTCA 59.595 40.000 0.00 0.00 39.91 3.58
3111 4258 5.163953 CCGTATCACAATCTTGTCAACTGTC 60.164 44.000 0.00 0.00 39.91 3.51
3112 4259 4.690748 CCGTATCACAATCTTGTCAACTGT 59.309 41.667 0.00 0.00 39.91 3.55
3113 4260 4.093408 CCCGTATCACAATCTTGTCAACTG 59.907 45.833 0.00 0.00 39.91 3.16
3114 4261 4.253685 CCCGTATCACAATCTTGTCAACT 58.746 43.478 0.00 0.00 39.91 3.16
3115 4262 3.374058 CCCCGTATCACAATCTTGTCAAC 59.626 47.826 0.00 0.00 39.91 3.18
3116 4263 3.008594 ACCCCGTATCACAATCTTGTCAA 59.991 43.478 0.00 0.00 39.91 3.18
3117 4264 2.569853 ACCCCGTATCACAATCTTGTCA 59.430 45.455 0.00 0.00 39.91 3.58
3118 4265 2.936498 CACCCCGTATCACAATCTTGTC 59.064 50.000 0.00 0.00 39.91 3.18
3119 4266 2.569853 TCACCCCGTATCACAATCTTGT 59.430 45.455 0.00 0.00 43.36 3.16
3120 4267 3.260475 TCACCCCGTATCACAATCTTG 57.740 47.619 0.00 0.00 0.00 3.02
3121 4268 3.370527 CCTTCACCCCGTATCACAATCTT 60.371 47.826 0.00 0.00 0.00 2.40
3122 4269 2.170607 CCTTCACCCCGTATCACAATCT 59.829 50.000 0.00 0.00 0.00 2.40
3123 4270 2.093128 ACCTTCACCCCGTATCACAATC 60.093 50.000 0.00 0.00 0.00 2.67
3124 4271 1.913419 ACCTTCACCCCGTATCACAAT 59.087 47.619 0.00 0.00 0.00 2.71
3125 4272 1.354101 ACCTTCACCCCGTATCACAA 58.646 50.000 0.00 0.00 0.00 3.33
3126 4273 1.826720 GTACCTTCACCCCGTATCACA 59.173 52.381 0.00 0.00 0.00 3.58
3127 4274 1.137675 GGTACCTTCACCCCGTATCAC 59.862 57.143 4.06 0.00 31.91 3.06
3128 4275 1.273154 TGGTACCTTCACCCCGTATCA 60.273 52.381 14.36 0.00 37.84 2.15
3129 4276 1.137675 GTGGTACCTTCACCCCGTATC 59.862 57.143 14.36 0.00 37.84 2.24
3130 4277 1.197812 GTGGTACCTTCACCCCGTAT 58.802 55.000 14.36 0.00 37.84 3.06
3131 4278 0.114954 AGTGGTACCTTCACCCCGTA 59.885 55.000 14.36 0.00 37.84 4.02
3132 4279 0.114954 TAGTGGTACCTTCACCCCGT 59.885 55.000 14.36 0.00 37.84 5.28
3133 4280 1.066645 GTTAGTGGTACCTTCACCCCG 60.067 57.143 14.36 0.00 37.84 5.73
3134 4281 1.980036 TGTTAGTGGTACCTTCACCCC 59.020 52.381 14.36 0.00 37.84 4.95
3135 4282 2.636403 ACTGTTAGTGGTACCTTCACCC 59.364 50.000 14.36 0.00 37.84 4.61
3136 4283 4.062991 CAACTGTTAGTGGTACCTTCACC 58.937 47.826 14.36 0.00 39.20 4.02
3137 4284 3.497262 GCAACTGTTAGTGGTACCTTCAC 59.503 47.826 14.36 2.79 35.51 3.18
3138 4285 3.495453 GGCAACTGTTAGTGGTACCTTCA 60.495 47.826 14.36 4.45 0.00 3.02
3139 4286 3.072211 GGCAACTGTTAGTGGTACCTTC 58.928 50.000 14.36 6.51 0.00 3.46
3140 4287 2.440253 TGGCAACTGTTAGTGGTACCTT 59.560 45.455 14.36 4.03 37.61 3.50
3172 4319 6.373759 TGAAGATCCTAAGCTCCTATACACA 58.626 40.000 0.00 0.00 0.00 3.72
3228 4375 0.531657 CGAGGAATGCCCATTTGCAA 59.468 50.000 0.00 0.00 45.84 4.08
3231 4378 5.964958 AATATACGAGGAATGCCCATTTG 57.035 39.130 0.00 0.00 37.41 2.32
3249 4396 9.444600 AGTGACTGAAATGTAAAACCGTAATAT 57.555 29.630 0.00 0.00 0.00 1.28
3250 4397 8.836268 AGTGACTGAAATGTAAAACCGTAATA 57.164 30.769 0.00 0.00 0.00 0.98
3251 4398 7.739498 AGTGACTGAAATGTAAAACCGTAAT 57.261 32.000 0.00 0.00 0.00 1.89
3252 4399 7.066043 ACAAGTGACTGAAATGTAAAACCGTAA 59.934 33.333 0.00 0.00 0.00 3.18
3253 4400 6.539464 ACAAGTGACTGAAATGTAAAACCGTA 59.461 34.615 0.00 0.00 0.00 4.02
3254 4401 5.355910 ACAAGTGACTGAAATGTAAAACCGT 59.644 36.000 0.00 0.00 0.00 4.83
3255 4402 5.816919 ACAAGTGACTGAAATGTAAAACCG 58.183 37.500 0.00 0.00 0.00 4.44
3268 4437 3.256879 TGCTCCTTCTAGACAAGTGACTG 59.743 47.826 0.00 0.00 0.00 3.51
3298 4467 3.572642 TCCTGAAGTACTCTGGTGTCAA 58.427 45.455 0.00 0.00 42.44 3.18
3323 4492 0.738412 GAGGCATGGCAAATGCACAC 60.738 55.000 22.64 10.45 46.21 3.82
3462 4631 1.079057 GAGGACGCTCCCAAGGAAC 60.079 63.158 1.06 0.00 37.19 3.62
3578 4751 7.447545 CCCCACCTAAAATAAATAGCTTCTACC 59.552 40.741 0.00 0.00 0.00 3.18
3580 4753 8.109560 ACCCCACCTAAAATAAATAGCTTCTA 57.890 34.615 0.00 0.00 0.00 2.10
3589 4762 2.826725 CGGCAACCCCACCTAAAATAAA 59.173 45.455 0.00 0.00 0.00 1.40
3590 4763 2.041350 TCGGCAACCCCACCTAAAATAA 59.959 45.455 0.00 0.00 0.00 1.40
3591 4764 1.634459 TCGGCAACCCCACCTAAAATA 59.366 47.619 0.00 0.00 0.00 1.40
3592 4765 0.406361 TCGGCAACCCCACCTAAAAT 59.594 50.000 0.00 0.00 0.00 1.82
3669 4842 7.224297 AGAACACCATTTATATACGCTCCAAT 58.776 34.615 0.00 0.00 0.00 3.16
3695 4868 1.913778 AGACATGGATGTTGCTTGCA 58.086 45.000 0.00 0.00 41.95 4.08
3760 4933 1.670967 GCGTACCAGTACAAGACACCC 60.671 57.143 8.57 0.00 35.87 4.61
3772 4945 1.442769 ATGAAAGTGCTGCGTACCAG 58.557 50.000 6.91 6.91 44.67 4.00
3773 4946 1.535028 CAATGAAAGTGCTGCGTACCA 59.465 47.619 0.00 0.00 0.00 3.25
3774 4947 1.135689 CCAATGAAAGTGCTGCGTACC 60.136 52.381 0.00 0.00 0.00 3.34
3798 4971 0.745845 AGAAGCCCAAGCAGCGTATG 60.746 55.000 0.00 0.00 43.56 2.39
3800 4973 1.079127 GAGAAGCCCAAGCAGCGTA 60.079 57.895 0.00 0.00 43.56 4.42
3833 5007 0.037697 AGTGCTACCGAATTGCGTCA 60.038 50.000 0.00 0.00 38.67 4.35
3853 5027 7.331934 CGACCCATGAACTGATACATATAAAGG 59.668 40.741 0.00 0.00 0.00 3.11
3861 5035 3.361786 TCTCGACCCATGAACTGATACA 58.638 45.455 0.00 0.00 0.00 2.29
3862 5036 4.386867 TTCTCGACCCATGAACTGATAC 57.613 45.455 0.00 0.00 0.00 2.24
3863 5037 4.466370 AGTTTCTCGACCCATGAACTGATA 59.534 41.667 0.00 0.00 0.00 2.15
3864 5038 3.261897 AGTTTCTCGACCCATGAACTGAT 59.738 43.478 0.00 0.00 0.00 2.90
3865 5039 2.632996 AGTTTCTCGACCCATGAACTGA 59.367 45.455 0.00 0.00 0.00 3.41
4062 5236 1.887301 CAAACCCGGTATTGCCACC 59.113 57.895 0.00 0.00 36.97 4.61
4063 5237 1.214325 GCAAACCCGGTATTGCCAC 59.786 57.895 23.78 4.17 44.72 5.01
4081 5255 7.875971 ACAAAAAGCAAATGTAGTTCCTCTAG 58.124 34.615 0.00 0.00 0.00 2.43
4087 5261 8.185003 ACTTCAACAAAAAGCAAATGTAGTTC 57.815 30.769 0.00 0.00 0.00 3.01
4093 5267 6.840075 TCCAAACTTCAACAAAAAGCAAATG 58.160 32.000 0.00 0.00 0.00 2.32
4104 5278 2.507886 TGGTCTCCTCCAAACTTCAACA 59.492 45.455 0.00 0.00 34.24 3.33
4105 5279 3.208747 TGGTCTCCTCCAAACTTCAAC 57.791 47.619 0.00 0.00 34.24 3.18
4124 5298 8.585018 AGGGGTAGAAACTGAAATGTTATTTTG 58.415 33.333 0.00 0.00 0.00 2.44
4128 5302 8.721133 AAAAGGGGTAGAAACTGAAATGTTAT 57.279 30.769 0.00 0.00 0.00 1.89
4216 5390 4.697352 CCGGTTCTCAAACTGAAGAATCAT 59.303 41.667 0.00 0.00 43.32 2.45
4217 5391 4.065088 CCGGTTCTCAAACTGAAGAATCA 58.935 43.478 0.00 0.00 43.32 2.57
4253 5427 1.076339 CCTCTTCTCGGCTCTCCCT 60.076 63.158 0.00 0.00 0.00 4.20
4254 5428 0.684805 TTCCTCTTCTCGGCTCTCCC 60.685 60.000 0.00 0.00 0.00 4.30
4255 5429 0.744281 CTTCCTCTTCTCGGCTCTCC 59.256 60.000 0.00 0.00 0.00 3.71
4256 5430 0.744281 CCTTCCTCTTCTCGGCTCTC 59.256 60.000 0.00 0.00 0.00 3.20
4257 5431 1.326951 GCCTTCCTCTTCTCGGCTCT 61.327 60.000 0.00 0.00 37.76 4.09
4258 5432 1.142965 GCCTTCCTCTTCTCGGCTC 59.857 63.158 0.00 0.00 37.76 4.70
4259 5433 2.363172 GGCCTTCCTCTTCTCGGCT 61.363 63.158 0.00 0.00 40.52 5.52
4260 5434 2.188207 GGCCTTCCTCTTCTCGGC 59.812 66.667 0.00 0.00 39.98 5.54
4326 5500 1.001068 CATTGCATTCTGTGGCACCAA 59.999 47.619 16.26 10.98 40.23 3.67
4378 5555 5.221402 GGTCTCAGCTCTGATCACATTATGA 60.221 44.000 0.00 0.00 43.13 2.15
4502 5690 6.522054 AGAAACGAGGTTTTTCAGAGATGTA 58.478 36.000 0.00 0.00 35.77 2.29
4503 5691 5.368989 AGAAACGAGGTTTTTCAGAGATGT 58.631 37.500 0.00 0.00 35.77 3.06
4560 5758 0.746063 GCCGGCCATTCATTTCATGA 59.254 50.000 18.11 0.00 37.55 3.07
4562 5760 1.037030 ACGCCGGCCATTCATTTCAT 61.037 50.000 23.46 0.00 0.00 2.57
4563 5761 1.247419 AACGCCGGCCATTCATTTCA 61.247 50.000 23.46 0.00 0.00 2.69
4564 5762 0.801836 CAACGCCGGCCATTCATTTC 60.802 55.000 23.46 0.00 0.00 2.17
4565 5763 1.215117 CAACGCCGGCCATTCATTT 59.785 52.632 23.46 0.00 0.00 2.32
4566 5764 2.709883 CCAACGCCGGCCATTCATT 61.710 57.895 23.46 2.70 0.00 2.57
4577 5775 0.943835 GGCAAACATGAACCAACGCC 60.944 55.000 0.00 0.00 0.00 5.68
4604 5802 7.821359 TCAACAATCCAGACAAAATCACAAAAA 59.179 29.630 0.00 0.00 0.00 1.94
4605 5803 7.326454 TCAACAATCCAGACAAAATCACAAAA 58.674 30.769 0.00 0.00 0.00 2.44
4606 5804 6.871844 TCAACAATCCAGACAAAATCACAAA 58.128 32.000 0.00 0.00 0.00 2.83
4607 5805 6.462552 TCAACAATCCAGACAAAATCACAA 57.537 33.333 0.00 0.00 0.00 3.33
4612 5810 6.041865 TGGTTCATCAACAATCCAGACAAAAT 59.958 34.615 0.00 0.00 33.70 1.82
4685 5936 0.496382 TCCCTCCTTCCCTCCAAAGA 59.504 55.000 0.00 0.00 0.00 2.52
4686 5937 1.283321 CTTCCCTCCTTCCCTCCAAAG 59.717 57.143 0.00 0.00 0.00 2.77
4693 5944 0.253207 TCCTTCCTTCCCTCCTTCCC 60.253 60.000 0.00 0.00 0.00 3.97
4695 5946 0.537653 CGTCCTTCCTTCCCTCCTTC 59.462 60.000 0.00 0.00 0.00 3.46
4700 5951 2.603776 ACGCGTCCTTCCTTCCCT 60.604 61.111 5.58 0.00 0.00 4.20
4701 5952 2.125633 GACGCGTCCTTCCTTCCC 60.126 66.667 28.61 0.00 0.00 3.97
4702 5953 2.506438 CGACGCGTCCTTCCTTCC 60.506 66.667 31.84 6.18 0.00 3.46
4703 5954 2.482296 TTCCGACGCGTCCTTCCTTC 62.482 60.000 31.84 6.96 0.00 3.46
4712 5963 3.419759 GCCATGTTTCCGACGCGT 61.420 61.111 13.85 13.85 0.00 6.01
4713 5964 4.499023 CGCCATGTTTCCGACGCG 62.499 66.667 3.53 3.53 31.28 6.01
4747 5998 3.055819 GCACAGACAGGAATTCAGGAGTA 60.056 47.826 7.93 0.00 0.00 2.59
4748 5999 2.289945 GCACAGACAGGAATTCAGGAGT 60.290 50.000 7.93 0.00 0.00 3.85
4749 6000 2.289882 TGCACAGACAGGAATTCAGGAG 60.290 50.000 7.93 0.00 0.00 3.69
4939 6195 4.870991 GGAGTAGGCTCTCACAACAATTAC 59.129 45.833 13.48 0.00 41.38 1.89
4941 6197 3.584848 AGGAGTAGGCTCTCACAACAATT 59.415 43.478 13.48 0.00 41.38 2.32
4942 6198 3.177228 AGGAGTAGGCTCTCACAACAAT 58.823 45.455 13.48 0.00 41.38 2.71
4947 6203 3.245300 ACAAGTAGGAGTAGGCTCTCACA 60.245 47.826 13.48 1.45 41.38 3.58
4948 6204 3.129638 CACAAGTAGGAGTAGGCTCTCAC 59.870 52.174 13.48 6.40 41.38 3.51
4949 6205 3.357203 CACAAGTAGGAGTAGGCTCTCA 58.643 50.000 13.48 0.00 41.38 3.27
4950 6206 2.691011 CCACAAGTAGGAGTAGGCTCTC 59.309 54.545 0.00 0.00 41.38 3.20
4951 6207 2.312140 TCCACAAGTAGGAGTAGGCTCT 59.688 50.000 0.00 0.00 41.38 4.09
4952 6208 2.691011 CTCCACAAGTAGGAGTAGGCTC 59.309 54.545 0.00 0.00 46.07 4.70
4953 6209 2.741145 CTCCACAAGTAGGAGTAGGCT 58.259 52.381 0.00 0.00 46.07 4.58
4960 6216 2.176889 GGTACTGCTCCACAAGTAGGA 58.823 52.381 0.00 0.00 41.66 2.94
4961 6217 1.135083 CGGTACTGCTCCACAAGTAGG 60.135 57.143 0.00 0.00 41.66 3.18
4962 6218 1.544691 ACGGTACTGCTCCACAAGTAG 59.455 52.381 0.23 0.00 42.91 2.57
4992 6248 3.194968 GGCCATACATATACCGTGCTACT 59.805 47.826 0.00 0.00 0.00 2.57
4996 6252 1.734163 GGGCCATACATATACCGTGC 58.266 55.000 4.39 0.00 0.00 5.34
5000 6256 4.894114 AGATCTACGGGCCATACATATACC 59.106 45.833 4.39 0.00 0.00 2.73
5001 6257 5.221263 CCAGATCTACGGGCCATACATATAC 60.221 48.000 4.39 0.00 0.00 1.47
5002 6258 4.893524 CCAGATCTACGGGCCATACATATA 59.106 45.833 4.39 0.00 0.00 0.86
5003 6259 3.706594 CCAGATCTACGGGCCATACATAT 59.293 47.826 4.39 0.00 0.00 1.78
5004 6260 3.096852 CCAGATCTACGGGCCATACATA 58.903 50.000 4.39 0.00 0.00 2.29
5005 6261 1.902508 CCAGATCTACGGGCCATACAT 59.097 52.381 4.39 0.00 0.00 2.29
5006 6262 1.133294 TCCAGATCTACGGGCCATACA 60.133 52.381 4.39 0.00 33.91 2.29
5007 6263 1.629043 TCCAGATCTACGGGCCATAC 58.371 55.000 4.39 0.00 33.91 2.39
5008 6264 2.457598 GATCCAGATCTACGGGCCATA 58.542 52.381 4.39 0.00 35.04 2.74
5009 6265 1.270907 GATCCAGATCTACGGGCCAT 58.729 55.000 4.39 0.00 35.04 4.40
5010 6266 1.179174 CGATCCAGATCTACGGGCCA 61.179 60.000 4.39 0.00 35.72 5.36
5011 6267 1.587054 CGATCCAGATCTACGGGCC 59.413 63.158 0.00 0.00 35.72 5.80
5012 6268 1.587054 CCGATCCAGATCTACGGGC 59.413 63.158 16.63 3.58 39.92 6.13
5013 6269 1.587054 GCCGATCCAGATCTACGGG 59.413 63.158 21.99 10.46 43.15 5.28
5014 6270 1.210413 CGCCGATCCAGATCTACGG 59.790 63.158 18.75 18.75 45.26 4.02
5015 6271 1.442857 GCGCCGATCCAGATCTACG 60.443 63.158 0.00 12.24 37.08 3.51
5016 6272 1.080434 GGCGCCGATCCAGATCTAC 60.080 63.158 12.58 0.00 35.72 2.59
5017 6273 2.626780 CGGCGCCGATCCAGATCTA 61.627 63.158 44.86 0.00 42.83 1.98
5018 6274 3.983494 CGGCGCCGATCCAGATCT 61.983 66.667 44.86 0.00 42.83 2.75
5039 6295 3.112709 GGCTCTTGCGTCGGACAC 61.113 66.667 9.10 0.00 40.82 3.67
5040 6296 1.600511 TATGGCTCTTGCGTCGGACA 61.601 55.000 9.10 0.00 40.82 4.02
5041 6297 1.141019 TATGGCTCTTGCGTCGGAC 59.859 57.895 0.00 0.00 40.82 4.79
5042 6298 1.141019 GTATGGCTCTTGCGTCGGA 59.859 57.895 0.00 0.00 40.82 4.55
5043 6299 1.883084 GGTATGGCTCTTGCGTCGG 60.883 63.158 0.00 0.00 40.82 4.79
5044 6300 2.230940 CGGTATGGCTCTTGCGTCG 61.231 63.158 0.00 0.00 40.82 5.12
5045 6301 0.101759 TACGGTATGGCTCTTGCGTC 59.898 55.000 0.00 0.00 40.82 5.19
5046 6302 0.179119 GTACGGTATGGCTCTTGCGT 60.179 55.000 0.00 0.00 40.82 5.24
5047 6303 1.206745 CGTACGGTATGGCTCTTGCG 61.207 60.000 7.57 0.00 40.82 4.85
5048 6304 0.179119 ACGTACGGTATGGCTCTTGC 60.179 55.000 21.06 0.00 38.76 4.01
5049 6305 2.357009 ACTACGTACGGTATGGCTCTTG 59.643 50.000 21.06 0.00 0.00 3.02
5050 6306 2.648059 ACTACGTACGGTATGGCTCTT 58.352 47.619 21.06 0.00 0.00 2.85
5051 6307 2.338577 ACTACGTACGGTATGGCTCT 57.661 50.000 21.06 0.00 0.00 4.09
5052 6308 3.427161 AAACTACGTACGGTATGGCTC 57.573 47.619 21.06 0.00 0.00 4.70
5053 6309 3.874392 AAAACTACGTACGGTATGGCT 57.126 42.857 21.06 0.00 0.00 4.75
5071 6327 1.548355 GCCCTAGGTTTCGGGGAAAAA 60.548 52.381 8.29 0.00 42.58 1.94
5072 6328 0.038599 GCCCTAGGTTTCGGGGAAAA 59.961 55.000 8.29 0.00 42.58 2.29
5073 6329 0.843343 AGCCCTAGGTTTCGGGGAAA 60.843 55.000 8.29 0.00 42.58 3.13
5074 6330 1.229723 AGCCCTAGGTTTCGGGGAA 60.230 57.895 8.29 0.00 42.58 3.97
5075 6331 1.688187 GAGCCCTAGGTTTCGGGGA 60.688 63.158 8.29 0.00 42.58 4.81
5076 6332 2.743179 GGAGCCCTAGGTTTCGGGG 61.743 68.421 8.29 0.00 40.95 5.73
5077 6333 2.743179 GGGAGCCCTAGGTTTCGGG 61.743 68.421 8.29 0.00 43.60 5.14
5078 6334 2.743179 GGGGAGCCCTAGGTTTCGG 61.743 68.421 8.29 0.00 41.34 4.30
5079 6335 2.908796 GGGGAGCCCTAGGTTTCG 59.091 66.667 8.29 0.00 41.34 3.46
5080 6336 2.743179 CCGGGGAGCCCTAGGTTTC 61.743 68.421 8.29 4.63 42.67 2.78
5081 6337 2.691252 CCGGGGAGCCCTAGGTTT 60.691 66.667 8.29 0.00 42.67 3.27
5098 6354 4.807039 TCGAAACCCTAGCGCCGC 62.807 66.667 2.29 0.00 0.00 6.53
5099 6355 2.884207 GTCGAAACCCTAGCGCCG 60.884 66.667 2.29 0.00 0.00 6.46
5100 6356 2.884207 CGTCGAAACCCTAGCGCC 60.884 66.667 2.29 0.00 0.00 6.53
5101 6357 2.126189 ACGTCGAAACCCTAGCGC 60.126 61.111 0.00 0.00 0.00 5.92
5102 6358 1.804326 CCACGTCGAAACCCTAGCG 60.804 63.158 0.00 0.00 0.00 4.26
5103 6359 0.037975 TTCCACGTCGAAACCCTAGC 60.038 55.000 0.00 0.00 0.00 3.42
5104 6360 2.064014 GTTTCCACGTCGAAACCCTAG 58.936 52.381 23.23 0.00 43.80 3.02
5105 6361 2.153366 GTTTCCACGTCGAAACCCTA 57.847 50.000 23.23 0.00 43.80 3.53
5106 6362 2.996444 GTTTCCACGTCGAAACCCT 58.004 52.632 23.23 0.00 43.80 4.34
5110 6366 1.421382 GATCGGTTTCCACGTCGAAA 58.579 50.000 4.10 4.10 35.25 3.46
5111 6367 0.730155 CGATCGGTTTCCACGTCGAA 60.730 55.000 7.38 0.00 37.19 3.71
5112 6368 1.154169 CGATCGGTTTCCACGTCGA 60.154 57.895 7.38 0.00 37.19 4.20
5113 6369 2.156446 CCGATCGGTTTCCACGTCG 61.156 63.158 26.35 0.00 35.91 5.12
5114 6370 2.450345 GCCGATCGGTTTCCACGTC 61.450 63.158 33.33 11.23 37.65 4.34
5115 6371 2.433664 GCCGATCGGTTTCCACGT 60.434 61.111 33.33 0.00 37.65 4.49
5116 6372 3.550992 CGCCGATCGGTTTCCACG 61.551 66.667 33.33 23.07 37.65 4.94
5139 6395 4.688966 GGCCCGCCGATGAGATCC 62.689 72.222 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.