Multiple sequence alignment - TraesCS7D01G415800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G415800 chr7D 100.000 3581 0 0 1 3581 534656954 534653374 0.000000e+00 6613.0
1 TraesCS7D01G415800 chr7D 92.233 103 8 0 1456 1558 534655367 534655265 2.880000e-31 147.0
2 TraesCS7D01G415800 chr7D 92.233 103 8 0 1588 1690 534655499 534655397 2.880000e-31 147.0
3 TraesCS7D01G415800 chr2A 87.202 1680 116 47 1033 2668 755060117 755061741 0.000000e+00 1820.0
4 TraesCS7D01G415800 chr2A 83.556 1125 98 49 1583 2668 746840860 746839784 0.000000e+00 972.0
5 TraesCS7D01G415800 chr2A 84.491 993 97 21 1 974 755058995 755059949 0.000000e+00 928.0
6 TraesCS7D01G415800 chr2A 93.888 409 19 6 2727 3132 763203754 763204159 2.360000e-171 612.0
7 TraesCS7D01G415800 chr2A 84.974 579 77 10 1819 2392 137260106 137259533 2.400000e-161 579.0
8 TraesCS7D01G415800 chr2A 85.570 298 30 10 3213 3497 755061834 755062131 2.090000e-77 300.0
9 TraesCS7D01G415800 chr2A 90.164 183 15 3 3221 3400 746839694 746839512 5.980000e-58 235.0
10 TraesCS7D01G415800 chr2A 88.957 163 15 1 1421 1583 746840887 746840728 7.840000e-47 198.0
11 TraesCS7D01G415800 chr2A 92.941 85 6 0 2495 2579 754708984 754708900 1.350000e-24 124.0
12 TraesCS7D01G415800 chr2B 90.605 1256 61 21 1451 2668 765561757 765562993 0.000000e+00 1613.0
13 TraesCS7D01G415800 chr2B 85.189 1087 94 32 1593 2653 751603969 751602924 0.000000e+00 1053.0
14 TraesCS7D01G415800 chr2B 82.767 824 108 18 1791 2603 110520867 110520067 0.000000e+00 704.0
15 TraesCS7D01G415800 chr2B 84.509 581 86 4 1814 2392 183211778 183212356 4.010000e-159 571.0
16 TraesCS7D01G415800 chr2B 92.935 184 10 3 3221 3401 751602817 751602634 7.620000e-67 265.0
17 TraesCS7D01G415800 chr2B 90.184 163 13 1 1421 1583 751604006 751603847 3.620000e-50 209.0
18 TraesCS7D01G415800 chr2B 90.244 123 11 1 1577 1698 765561750 765561872 3.700000e-35 159.0
19 TraesCS7D01G415800 chr2B 92.941 85 6 0 2495 2579 765486841 765486757 1.350000e-24 124.0
20 TraesCS7D01G415800 chr2B 92.647 68 2 1 1016 1083 765561647 765561711 1.060000e-15 95.3
21 TraesCS7D01G415800 chr2D 89.044 1214 70 29 1451 2646 623790866 623792034 0.000000e+00 1447.0
22 TraesCS7D01G415800 chr2D 88.720 922 71 17 1 903 623788392 623789299 0.000000e+00 1096.0
23 TraesCS7D01G415800 chr2D 85.101 1094 104 29 1588 2668 616626874 616625827 0.000000e+00 1062.0
24 TraesCS7D01G415800 chr2D 85.615 577 77 6 1819 2392 129941616 129942189 5.120000e-168 601.0
25 TraesCS7D01G415800 chr2D 84.906 583 80 7 1814 2392 129837505 129838083 1.850000e-162 582.0
26 TraesCS7D01G415800 chr2D 84.682 581 75 12 1819 2392 131163699 131163126 5.190000e-158 568.0
27 TraesCS7D01G415800 chr2D 88.036 443 35 4 2149 2580 623793653 623794088 3.190000e-140 508.0
28 TraesCS7D01G415800 chr2D 94.561 239 10 2 1016 1254 623790558 623790793 2.030000e-97 366.0
29 TraesCS7D01G415800 chr2D 91.892 185 11 3 3221 3401 616625743 616625559 4.590000e-64 255.0
30 TraesCS7D01G415800 chr2D 86.425 221 23 3 3214 3427 623792159 623792379 5.980000e-58 235.0
31 TraesCS7D01G415800 chr2D 90.798 163 12 2 1421 1583 616626906 616626747 7.790000e-52 215.0
32 TraesCS7D01G415800 chr2D 91.057 123 10 1 1577 1698 623790859 623790981 7.950000e-37 165.0
33 TraesCS7D01G415800 chr2D 86.667 105 11 1 2491 2595 129838202 129838303 2.920000e-21 113.0
34 TraesCS7D01G415800 chr3D 93.735 415 20 4 2727 3139 23155579 23155989 5.080000e-173 617.0
35 TraesCS7D01G415800 chr7B 93.873 408 21 3 2727 3134 2379643 2380046 2.360000e-171 612.0
36 TraesCS7D01G415800 chr7B 93.431 411 18 7 2727 3133 150834199 150834604 5.120000e-168 601.0
37 TraesCS7D01G415800 chr1A 93.285 417 20 8 2724 3134 511219652 511219238 3.060000e-170 608.0
38 TraesCS7D01G415800 chr1A 92.788 416 24 6 2724 3134 27328801 27328387 6.620000e-167 597.0
39 TraesCS7D01G415800 chr1A 92.593 108 8 0 867 974 313910454 313910347 4.790000e-34 156.0
40 TraesCS7D01G415800 chr1A 86.029 136 15 4 841 974 325051926 325051793 3.730000e-30 143.0
41 TraesCS7D01G415800 chr5B 93.627 408 21 3 2727 3134 87981707 87981305 3.950000e-169 604.0
42 TraesCS7D01G415800 chr5B 93.029 416 20 9 2727 3135 608557272 608556859 1.840000e-167 599.0
43 TraesCS7D01G415800 chr5B 91.964 112 8 1 864 974 712462201 712462312 4.790000e-34 156.0
44 TraesCS7D01G415800 chr1B 93.187 411 22 5 2727 3134 443202 442795 1.840000e-167 599.0
45 TraesCS7D01G415800 chr1B 89.167 120 13 0 855 974 683576074 683575955 2.230000e-32 150.0
46 TraesCS7D01G415800 chr3A 91.525 118 9 1 857 974 663433448 663433564 1.030000e-35 161.0
47 TraesCS7D01G415800 chr3A 91.892 111 9 0 864 974 596770804 596770914 4.790000e-34 156.0
48 TraesCS7D01G415800 chr5D 91.892 111 9 0 864 974 33680782 33680672 4.790000e-34 156.0
49 TraesCS7D01G415800 chr4D 90.678 118 9 2 858 974 12520310 12520194 4.790000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G415800 chr7D 534653374 534656954 3580 True 2302.333333 6613 94.822000 1 3581 3 chr7D.!!$R1 3580
1 TraesCS7D01G415800 chr2A 755058995 755062131 3136 False 1016.000000 1820 85.754333 1 3497 3 chr2A.!!$F2 3496
2 TraesCS7D01G415800 chr2A 137259533 137260106 573 True 579.000000 579 84.974000 1819 2392 1 chr2A.!!$R1 573
3 TraesCS7D01G415800 chr2A 746839512 746840887 1375 True 468.333333 972 87.559000 1421 3400 3 chr2A.!!$R3 1979
4 TraesCS7D01G415800 chr2B 110520067 110520867 800 True 704.000000 704 82.767000 1791 2603 1 chr2B.!!$R1 812
5 TraesCS7D01G415800 chr2B 765561647 765562993 1346 False 622.433333 1613 91.165333 1016 2668 3 chr2B.!!$F2 1652
6 TraesCS7D01G415800 chr2B 183211778 183212356 578 False 571.000000 571 84.509000 1814 2392 1 chr2B.!!$F1 578
7 TraesCS7D01G415800 chr2B 751602634 751604006 1372 True 509.000000 1053 89.436000 1421 3401 3 chr2B.!!$R3 1980
8 TraesCS7D01G415800 chr2D 623788392 623794088 5696 False 636.166667 1447 89.640500 1 3427 6 chr2D.!!$F3 3426
9 TraesCS7D01G415800 chr2D 129941616 129942189 573 False 601.000000 601 85.615000 1819 2392 1 chr2D.!!$F1 573
10 TraesCS7D01G415800 chr2D 131163126 131163699 573 True 568.000000 568 84.682000 1819 2392 1 chr2D.!!$R1 573
11 TraesCS7D01G415800 chr2D 616625559 616626906 1347 True 510.666667 1062 89.263667 1421 3401 3 chr2D.!!$R2 1980
12 TraesCS7D01G415800 chr2D 129837505 129838303 798 False 347.500000 582 85.786500 1814 2595 2 chr2D.!!$F2 781

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
722 747 0.107165 GATCAAAGCCCGGCCTACTT 60.107 55.0 5.55 0.00 0.00 2.24 F
1446 2641 0.035439 AATGAAGATTCACCGGCGGT 60.035 50.0 28.83 28.83 40.49 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1941 3301 0.033504 GACCTTGTCGTCCAGCTTCA 59.966 55.0 0.0 0.0 0.0 3.02 R
3158 4641 0.320073 CCCACACGAAACTCCGCTTA 60.320 55.0 0.0 0.0 0.0 3.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.637276 TGAATCTGGTTTTCGCTGAGTAA 58.363 39.130 0.00 0.00 0.00 2.24
76 89 0.109179 GCCATGTGCGATTTTCAGCA 60.109 50.000 0.00 0.00 41.55 4.41
112 126 7.383843 TCAAACTTTGACAAAAGAAGGAAACAC 59.616 33.333 1.62 0.00 44.81 3.32
190 204 1.593265 CTGCTGCCACCATTTTCCC 59.407 57.895 0.00 0.00 0.00 3.97
213 227 7.929245 TCCCAAACAGCTTTAAAAATAACCTTC 59.071 33.333 0.00 0.00 0.00 3.46
230 245 8.846943 ATAACCTTCAATTTCATTTTCAACCC 57.153 30.769 0.00 0.00 0.00 4.11
238 253 9.672673 TCAATTTCATTTTCAACCCTTTTTGTA 57.327 25.926 0.00 0.00 0.00 2.41
248 263 6.712276 TCAACCCTTTTTGTAAACCAAACAT 58.288 32.000 0.00 0.00 42.63 2.71
365 383 4.062293 CGTTACATCTCACTTTCAACCCA 58.938 43.478 0.00 0.00 0.00 4.51
381 399 4.714308 TCAACCCATTTTTGGTCAGACTTT 59.286 37.500 0.00 0.00 34.15 2.66
382 400 5.188751 TCAACCCATTTTTGGTCAGACTTTT 59.811 36.000 0.00 0.00 34.15 2.27
383 401 5.692115 ACCCATTTTTGGTCAGACTTTTT 57.308 34.783 0.00 0.00 0.00 1.94
388 406 8.951243 CCCATTTTTGGTCAGACTTTTTAAAAA 58.049 29.630 12.62 12.62 32.34 1.94
411 429 9.083080 AAAAACCATTTTAAAAGAGTGAACTCG 57.917 29.630 6.79 0.00 41.02 4.18
436 454 9.069082 CGGGACTAATATACTAATCATCCTAGG 57.931 40.741 0.82 0.82 0.00 3.02
513 532 4.947645 TCAGCCCTTTCTTTGTCAATTTG 58.052 39.130 0.00 0.00 0.00 2.32
523 542 8.572855 TTTCTTTGTCAATTTGGACCAAAAAT 57.427 26.923 23.11 12.57 36.90 1.82
599 621 5.004361 TCATTATGGGAAAGGTTTGGTCA 57.996 39.130 0.00 0.00 0.00 4.02
600 622 5.588845 TCATTATGGGAAAGGTTTGGTCAT 58.411 37.500 0.00 0.00 0.00 3.06
607 630 4.450976 GGAAAGGTTTGGTCATTTTTGCT 58.549 39.130 0.00 0.00 0.00 3.91
702 727 2.213499 CAGGGCGATCAATAACAGGTC 58.787 52.381 0.00 0.00 0.00 3.85
713 738 2.396590 TAACAGGTCGATCAAAGCCC 57.603 50.000 0.00 0.00 0.00 5.19
722 747 0.107165 GATCAAAGCCCGGCCTACTT 60.107 55.000 5.55 0.00 0.00 2.24
733 758 2.618053 CGGCCTACTTAGTGAAACCAG 58.382 52.381 0.00 0.00 37.80 4.00
756 781 3.883830 TCAGCAGAGAGAAGGTTGATC 57.116 47.619 0.00 0.00 0.00 2.92
776 801 8.352942 GTTGATCCTAGCCGATTTTGATAATTT 58.647 33.333 0.00 0.00 0.00 1.82
819 844 3.040147 TGAGAGTTCGGTGTTGAATCC 57.960 47.619 0.00 0.00 0.00 3.01
822 847 4.282449 TGAGAGTTCGGTGTTGAATCCTAA 59.718 41.667 0.00 0.00 0.00 2.69
823 848 5.221561 TGAGAGTTCGGTGTTGAATCCTAAA 60.222 40.000 0.00 0.00 0.00 1.85
833 858 6.127897 GGTGTTGAATCCTAAACAGATGGAAG 60.128 42.308 0.00 0.00 36.98 3.46
838 863 6.216662 TGAATCCTAAACAGATGGAAGGGTTA 59.783 38.462 0.00 0.00 30.78 2.85
975 1982 7.787725 AGATTCACTTATTTTGATCCGTACC 57.212 36.000 0.00 0.00 0.00 3.34
976 1983 7.335627 AGATTCACTTATTTTGATCCGTACCA 58.664 34.615 0.00 0.00 0.00 3.25
977 1984 7.993183 AGATTCACTTATTTTGATCCGTACCAT 59.007 33.333 0.00 0.00 0.00 3.55
978 1985 7.931578 TTCACTTATTTTGATCCGTACCATT 57.068 32.000 0.00 0.00 0.00 3.16
986 2153 0.750850 ATCCGTACCATTGTCCCGAG 59.249 55.000 0.00 0.00 0.00 4.63
987 2154 1.520787 CCGTACCATTGTCCCGAGC 60.521 63.158 0.00 0.00 0.00 5.03
1119 2301 1.896183 CCCCATGTGCACAACGACA 60.896 57.895 25.72 0.00 0.00 4.35
1182 2367 0.309922 CCTTCTGCAACAGCTGTGTG 59.690 55.000 22.49 20.15 36.84 3.82
1187 2372 2.723746 CAACAGCTGTGTGGCCAC 59.276 61.111 29.67 29.67 42.19 5.01
1217 2402 1.742880 TGAGGCAGCGTGAGAATGC 60.743 57.895 0.00 0.00 42.44 3.56
1249 2434 2.045926 AATGCCCCGACTGTGAGC 60.046 61.111 0.00 0.00 0.00 4.26
1291 2476 2.040544 CCCATGGTGCGGTGAGTTC 61.041 63.158 11.73 0.00 0.00 3.01
1292 2477 1.003355 CCATGGTGCGGTGAGTTCT 60.003 57.895 2.57 0.00 0.00 3.01
1293 2478 0.249120 CCATGGTGCGGTGAGTTCTA 59.751 55.000 2.57 0.00 0.00 2.10
1294 2479 1.359848 CATGGTGCGGTGAGTTCTAC 58.640 55.000 0.00 0.00 0.00 2.59
1301 2486 2.290768 TGCGGTGAGTTCTACCTACTCT 60.291 50.000 0.00 0.00 41.99 3.24
1314 2499 8.355913 GTTCTACCTACTCTCTAGTCTCTACTC 58.644 44.444 0.00 0.00 37.15 2.59
1325 2510 6.277605 TCTAGTCTCTACTCGATCTCTTGTG 58.722 44.000 0.00 0.00 37.15 3.33
1326 2511 4.839121 AGTCTCTACTCGATCTCTTGTGT 58.161 43.478 0.00 0.00 0.00 3.72
1328 2513 5.708230 AGTCTCTACTCGATCTCTTGTGTTT 59.292 40.000 0.00 0.00 0.00 2.83
1329 2514 5.797934 GTCTCTACTCGATCTCTTGTGTTTG 59.202 44.000 0.00 0.00 0.00 2.93
1330 2515 5.060662 TCTACTCGATCTCTTGTGTTTGG 57.939 43.478 0.00 0.00 0.00 3.28
1331 2516 3.753294 ACTCGATCTCTTGTGTTTGGT 57.247 42.857 0.00 0.00 0.00 3.67
1332 2517 3.393800 ACTCGATCTCTTGTGTTTGGTG 58.606 45.455 0.00 0.00 0.00 4.17
1333 2518 2.738846 CTCGATCTCTTGTGTTTGGTGG 59.261 50.000 0.00 0.00 0.00 4.61
1334 2519 2.104111 TCGATCTCTTGTGTTTGGTGGT 59.896 45.455 0.00 0.00 0.00 4.16
1335 2520 2.878406 CGATCTCTTGTGTTTGGTGGTT 59.122 45.455 0.00 0.00 0.00 3.67
1336 2521 3.058914 CGATCTCTTGTGTTTGGTGGTTC 60.059 47.826 0.00 0.00 0.00 3.62
1337 2522 3.358111 TCTCTTGTGTTTGGTGGTTCA 57.642 42.857 0.00 0.00 0.00 3.18
1338 2523 3.278574 TCTCTTGTGTTTGGTGGTTCAG 58.721 45.455 0.00 0.00 0.00 3.02
1339 2524 3.054728 TCTCTTGTGTTTGGTGGTTCAGA 60.055 43.478 0.00 0.00 0.00 3.27
1340 2525 3.278574 TCTTGTGTTTGGTGGTTCAGAG 58.721 45.455 0.00 0.00 0.00 3.35
1341 2526 3.054728 TCTTGTGTTTGGTGGTTCAGAGA 60.055 43.478 0.00 0.00 0.00 3.10
1342 2527 3.576078 TGTGTTTGGTGGTTCAGAGAT 57.424 42.857 0.00 0.00 0.00 2.75
1343 2528 3.213506 TGTGTTTGGTGGTTCAGAGATG 58.786 45.455 0.00 0.00 0.00 2.90
1344 2529 3.118075 TGTGTTTGGTGGTTCAGAGATGA 60.118 43.478 0.00 0.00 0.00 2.92
1345 2530 3.499918 GTGTTTGGTGGTTCAGAGATGAG 59.500 47.826 0.00 0.00 0.00 2.90
1352 2537 3.434984 GTGGTTCAGAGATGAGTTTGCTC 59.565 47.826 0.00 0.00 41.97 4.26
1357 2542 0.458543 GAGATGAGTTTGCTCGCCGA 60.459 55.000 0.00 0.00 44.48 5.54
1361 2546 4.699522 AGTTTGCTCGCCGACCCC 62.700 66.667 0.00 0.00 0.00 4.95
1389 2575 5.594199 ACTCAAATTAACCCCCTTGTACT 57.406 39.130 0.00 0.00 0.00 2.73
1401 2587 3.624777 CCCTTGTACTCAGGCATGAAAT 58.375 45.455 1.37 0.00 34.23 2.17
1402 2588 3.629398 CCCTTGTACTCAGGCATGAAATC 59.371 47.826 1.37 0.00 34.23 2.17
1403 2589 3.310774 CCTTGTACTCAGGCATGAAATCG 59.689 47.826 1.37 0.00 34.23 3.34
1404 2590 3.885724 TGTACTCAGGCATGAAATCGA 57.114 42.857 1.37 0.00 34.23 3.59
1405 2591 3.521560 TGTACTCAGGCATGAAATCGAC 58.478 45.455 1.37 0.00 34.23 4.20
1407 2593 1.303309 CTCAGGCATGAAATCGACCC 58.697 55.000 1.37 0.00 34.23 4.46
1418 2613 1.125093 AATCGACCCCACCACAGTCA 61.125 55.000 0.00 0.00 0.00 3.41
1423 2618 2.030562 CCCACCACAGTCACCGAC 59.969 66.667 0.00 0.00 0.00 4.79
1446 2641 0.035439 AATGAAGATTCACCGGCGGT 60.035 50.000 28.83 28.83 40.49 5.68
1549 2768 1.078918 CGCCCATGACTTCTGCTCA 60.079 57.895 0.00 0.00 0.00 4.26
1561 2780 1.597742 TCTGCTCAAGCTGTGTTTCC 58.402 50.000 3.32 0.00 42.66 3.13
1572 2791 2.355363 TGTTTCCCGTCGACTGCG 60.355 61.111 14.70 0.00 39.35 5.18
1709 3063 1.566018 CGCTCGTCCAACTTCCCAAC 61.566 60.000 0.00 0.00 0.00 3.77
1710 3064 1.566018 GCTCGTCCAACTTCCCAACG 61.566 60.000 0.00 0.00 34.80 4.10
1711 3065 0.249741 CTCGTCCAACTTCCCAACGT 60.250 55.000 0.00 0.00 35.04 3.99
1762 3116 3.200593 CAGCATCAGCCTGCCGAC 61.201 66.667 0.31 0.00 43.33 4.79
1763 3117 4.479993 AGCATCAGCCTGCCGACC 62.480 66.667 0.31 0.00 43.33 4.79
1764 3118 4.479993 GCATCAGCCTGCCGACCT 62.480 66.667 0.00 0.00 36.10 3.85
1765 3119 2.202987 CATCAGCCTGCCGACCTC 60.203 66.667 0.00 0.00 0.00 3.85
1766 3120 3.842923 ATCAGCCTGCCGACCTCG 61.843 66.667 0.00 0.00 39.44 4.63
1817 3177 0.179073 CAATGGAGATTCGCCGGTCT 60.179 55.000 1.90 0.00 0.00 3.85
1867 3227 3.610619 CTGCATGGAGACGGTGCCA 62.611 63.158 8.85 2.23 42.05 4.92
1925 3285 2.776670 CTTCTGCTCCAGCTGCGTCA 62.777 60.000 8.66 4.04 42.66 4.35
1938 3298 3.045142 CGTCACCCAGTACGTGGT 58.955 61.111 0.00 3.76 46.37 4.16
1940 3300 1.521450 CGTCACCCAGTACGTGGTCT 61.521 60.000 0.00 0.00 46.37 3.85
1941 3301 0.677842 GTCACCCAGTACGTGGTCTT 59.322 55.000 0.00 0.00 46.37 3.01
2005 3365 1.602237 CTGCGAGGGTGGTACCATT 59.398 57.895 19.72 7.07 41.02 3.16
2046 3406 2.545550 ATCATCCCCACGGACCTCCA 62.546 60.000 0.00 0.00 42.48 3.86
2143 3528 2.651361 CTCTTGCTCACCGACGGT 59.349 61.111 15.37 15.37 35.62 4.83
2392 3777 6.275335 GTGCAATTACATCAAATGCAGGTAT 58.725 36.000 0.20 0.00 0.00 2.73
2604 4063 4.431416 ACGATTTGGTTGGCTATGGATA 57.569 40.909 0.00 0.00 0.00 2.59
2605 4064 4.134563 ACGATTTGGTTGGCTATGGATAC 58.865 43.478 0.00 0.00 0.00 2.24
2646 4110 1.406069 GCCACATGAGTTCATCTCGGT 60.406 52.381 0.00 0.00 45.46 4.69
2669 4152 6.377146 GGTCATGTTTCCTCAAGCCTTTATTA 59.623 38.462 0.00 0.00 0.00 0.98
2671 4154 8.470002 GTCATGTTTCCTCAAGCCTTTATTAAT 58.530 33.333 0.00 0.00 0.00 1.40
2672 4155 9.034800 TCATGTTTCCTCAAGCCTTTATTAATT 57.965 29.630 0.00 0.00 0.00 1.40
2673 4156 9.305925 CATGTTTCCTCAAGCCTTTATTAATTC 57.694 33.333 0.00 0.00 0.00 2.17
2675 4158 8.522830 TGTTTCCTCAAGCCTTTATTAATTCAG 58.477 33.333 0.00 0.00 0.00 3.02
2677 4160 8.650143 TTCCTCAAGCCTTTATTAATTCAGTT 57.350 30.769 0.00 0.00 0.00 3.16
2678 4161 8.650143 TCCTCAAGCCTTTATTAATTCAGTTT 57.350 30.769 0.00 0.00 0.00 2.66
2679 4162 9.088987 TCCTCAAGCCTTTATTAATTCAGTTTT 57.911 29.630 0.00 0.00 0.00 2.43
2714 4197 8.870116 ACATCTACATCTACCATAAGTATTGCA 58.130 33.333 0.00 0.00 0.00 4.08
2715 4198 9.144747 CATCTACATCTACCATAAGTATTGCAC 57.855 37.037 0.00 0.00 0.00 4.57
2716 4199 8.245195 TCTACATCTACCATAAGTATTGCACA 57.755 34.615 0.00 0.00 0.00 4.57
2717 4200 8.870116 TCTACATCTACCATAAGTATTGCACAT 58.130 33.333 0.00 0.00 0.00 3.21
2718 4201 7.969536 ACATCTACCATAAGTATTGCACATC 57.030 36.000 0.00 0.00 0.00 3.06
2719 4202 7.739825 ACATCTACCATAAGTATTGCACATCT 58.260 34.615 0.00 0.00 0.00 2.90
2720 4203 8.870116 ACATCTACCATAAGTATTGCACATCTA 58.130 33.333 0.00 0.00 0.00 1.98
2729 4212 5.911752 AGTATTGCACATCTAAGTCAGGAG 58.088 41.667 0.00 0.00 0.00 3.69
2730 4213 3.616956 TTGCACATCTAAGTCAGGAGG 57.383 47.619 0.00 0.00 0.00 4.30
2731 4214 1.833630 TGCACATCTAAGTCAGGAGGG 59.166 52.381 0.00 0.00 0.00 4.30
2739 4222 4.240323 TCTAAGTCAGGAGGGGAACTTTT 58.760 43.478 0.00 0.00 0.00 2.27
2740 4223 2.959465 AGTCAGGAGGGGAACTTTTG 57.041 50.000 0.00 0.00 0.00 2.44
2741 4224 1.425448 AGTCAGGAGGGGAACTTTTGG 59.575 52.381 0.00 0.00 0.00 3.28
2743 4226 1.423921 TCAGGAGGGGAACTTTTGGTC 59.576 52.381 0.00 0.00 34.82 4.02
2744 4227 1.425448 CAGGAGGGGAACTTTTGGTCT 59.575 52.381 0.00 0.00 36.15 3.85
2745 4228 2.642807 CAGGAGGGGAACTTTTGGTCTA 59.357 50.000 0.00 0.00 36.15 2.59
2747 4230 3.267031 AGGAGGGGAACTTTTGGTCTATG 59.733 47.826 0.00 0.00 36.15 2.23
2748 4231 3.621558 GAGGGGAACTTTTGGTCTATGG 58.378 50.000 0.00 0.00 36.15 2.74
2750 4233 2.623239 GGGGAACTTTTGGTCTATGGGG 60.623 54.545 0.00 0.00 36.15 4.96
2751 4234 2.310647 GGGAACTTTTGGTCTATGGGGA 59.689 50.000 0.00 0.00 36.15 4.81
2752 4235 3.353557 GGAACTTTTGGTCTATGGGGAC 58.646 50.000 0.00 0.00 36.15 4.46
2753 4236 3.245122 GGAACTTTTGGTCTATGGGGACA 60.245 47.826 0.00 0.00 39.95 4.02
2764 4247 1.922057 TGGGGACATATGCACCCTG 59.078 57.895 26.78 0.25 43.72 4.45
2766 4249 1.136828 GGGGACATATGCACCCTGTA 58.863 55.000 26.98 0.00 42.86 2.74
2768 4251 2.553028 GGGGACATATGCACCCTGTATG 60.553 54.545 26.98 6.07 42.86 2.39
2807 4290 9.843874 GTAATTCAACAAAAAGTCGAAAATTCC 57.156 29.630 0.00 0.00 0.00 3.01
2808 4291 8.716646 AATTCAACAAAAAGTCGAAAATTCCT 57.283 26.923 0.00 0.00 0.00 3.36
2809 4292 7.518731 TTCAACAAAAAGTCGAAAATTCCTG 57.481 32.000 0.00 0.00 0.00 3.86
2810 4293 6.857956 TCAACAAAAAGTCGAAAATTCCTGA 58.142 32.000 0.00 0.00 0.00 3.86
2811 4294 7.316640 TCAACAAAAAGTCGAAAATTCCTGAA 58.683 30.769 0.00 0.00 0.00 3.02
2812 4295 7.815068 TCAACAAAAAGTCGAAAATTCCTGAAA 59.185 29.630 0.00 0.00 0.00 2.69
2813 4296 8.439286 CAACAAAAAGTCGAAAATTCCTGAAAA 58.561 29.630 0.00 0.00 0.00 2.29
2814 4297 8.716646 ACAAAAAGTCGAAAATTCCTGAAAAT 57.283 26.923 0.00 0.00 0.00 1.82
2815 4298 9.810545 ACAAAAAGTCGAAAATTCCTGAAAATA 57.189 25.926 0.00 0.00 0.00 1.40
2851 4334 8.553459 AAACTTGACCTTCTATTGTACTCATG 57.447 34.615 0.00 0.00 0.00 3.07
2852 4335 7.482169 ACTTGACCTTCTATTGTACTCATGA 57.518 36.000 0.00 0.00 0.00 3.07
2853 4336 7.551585 ACTTGACCTTCTATTGTACTCATGAG 58.448 38.462 21.37 21.37 0.00 2.90
2854 4337 7.397476 ACTTGACCTTCTATTGTACTCATGAGA 59.603 37.037 29.27 10.06 0.00 3.27
2855 4338 7.718334 TGACCTTCTATTGTACTCATGAGAA 57.282 36.000 29.27 13.44 0.00 2.87
2856 4339 8.134202 TGACCTTCTATTGTACTCATGAGAAA 57.866 34.615 29.27 18.68 30.03 2.52
2857 4340 8.593679 TGACCTTCTATTGTACTCATGAGAAAA 58.406 33.333 29.27 18.35 30.03 2.29
2858 4341 9.606631 GACCTTCTATTGTACTCATGAGAAAAT 57.393 33.333 29.27 22.87 30.03 1.82
2867 4350 9.513906 TTGTACTCATGAGAAAATAAATCCACA 57.486 29.630 29.27 10.88 0.00 4.17
2868 4351 9.513906 TGTACTCATGAGAAAATAAATCCACAA 57.486 29.630 29.27 0.00 0.00 3.33
2898 4381 9.987272 AAAATATCCCTTTGACTTCTTTTTCAG 57.013 29.630 0.00 0.00 0.00 3.02
2899 4382 8.940397 AATATCCCTTTGACTTCTTTTTCAGA 57.060 30.769 0.00 0.00 0.00 3.27
2900 4383 8.940397 ATATCCCTTTGACTTCTTTTTCAGAA 57.060 30.769 0.00 0.00 39.39 3.02
2901 4384 7.660030 ATCCCTTTGACTTCTTTTTCAGAAA 57.340 32.000 0.00 0.00 41.25 2.52
2902 4385 7.475137 TCCCTTTGACTTCTTTTTCAGAAAA 57.525 32.000 4.06 4.06 41.25 2.29
2916 4399 8.962857 TTTTTCAGAAAAGACAAATTTTTGGC 57.037 26.923 8.34 4.44 46.60 4.52
2929 4412 9.255304 GACAAATTTTTGGCTAAAATAGTGTGA 57.745 29.630 25.81 0.92 43.84 3.58
2930 4413 9.606631 ACAAATTTTTGGCTAAAATAGTGTGAA 57.393 25.926 22.86 0.00 43.84 3.18
2934 4417 8.980143 TTTTTGGCTAAAATAGTGTGAATAGC 57.020 30.769 8.93 0.00 35.82 2.97
2935 4418 5.984233 TGGCTAAAATAGTGTGAATAGCG 57.016 39.130 0.00 0.00 37.28 4.26
2936 4419 5.666462 TGGCTAAAATAGTGTGAATAGCGA 58.334 37.500 0.00 0.00 37.28 4.93
2937 4420 5.522460 TGGCTAAAATAGTGTGAATAGCGAC 59.478 40.000 0.00 0.00 37.28 5.19
2938 4421 5.050295 GGCTAAAATAGTGTGAATAGCGACC 60.050 44.000 0.00 0.00 37.28 4.79
2939 4422 5.753921 GCTAAAATAGTGTGAATAGCGACCT 59.246 40.000 0.00 0.00 0.00 3.85
2940 4423 6.921857 GCTAAAATAGTGTGAATAGCGACCTA 59.078 38.462 0.00 0.00 0.00 3.08
2941 4424 7.599245 GCTAAAATAGTGTGAATAGCGACCTAT 59.401 37.037 0.00 0.00 35.80 2.57
2944 4427 9.998106 AAAATAGTGTGAATAGCGACCTATAAT 57.002 29.630 0.00 0.00 33.14 1.28
2947 4430 6.622549 AGTGTGAATAGCGACCTATAATAGC 58.377 40.000 0.00 0.00 33.14 2.97
2948 4431 6.208797 AGTGTGAATAGCGACCTATAATAGCA 59.791 38.462 0.00 0.00 33.14 3.49
2949 4432 6.866770 GTGTGAATAGCGACCTATAATAGCAA 59.133 38.462 0.00 0.00 33.14 3.91
2950 4433 7.384115 GTGTGAATAGCGACCTATAATAGCAAA 59.616 37.037 0.00 0.00 33.14 3.68
2951 4434 8.094548 TGTGAATAGCGACCTATAATAGCAAAT 58.905 33.333 0.00 0.00 33.14 2.32
2952 4435 9.582431 GTGAATAGCGACCTATAATAGCAAATA 57.418 33.333 0.00 0.00 33.14 1.40
2984 4467 4.799564 TTTTTGCTGTGAGGTCAACTTT 57.200 36.364 0.00 0.00 0.00 2.66
2985 4468 4.799564 TTTTGCTGTGAGGTCAACTTTT 57.200 36.364 0.00 0.00 0.00 2.27
2986 4469 3.781079 TTGCTGTGAGGTCAACTTTTG 57.219 42.857 0.00 0.00 0.00 2.44
2987 4470 2.722094 TGCTGTGAGGTCAACTTTTGT 58.278 42.857 0.00 0.00 0.00 2.83
2988 4471 3.088532 TGCTGTGAGGTCAACTTTTGTT 58.911 40.909 0.00 0.00 44.66 2.83
2989 4472 3.509575 TGCTGTGAGGTCAACTTTTGTTT 59.490 39.130 0.00 0.00 41.35 2.83
2990 4473 4.021544 TGCTGTGAGGTCAACTTTTGTTTT 60.022 37.500 0.00 0.00 41.35 2.43
2991 4474 4.929211 GCTGTGAGGTCAACTTTTGTTTTT 59.071 37.500 0.00 0.00 41.35 1.94
3018 4501 9.594478 TTTCATCGAGATTTATTTACTAGTGCA 57.406 29.630 5.39 0.00 0.00 4.57
3019 4502 9.594478 TTCATCGAGATTTATTTACTAGTGCAA 57.406 29.630 5.39 0.00 0.00 4.08
3020 4503 9.594478 TCATCGAGATTTATTTACTAGTGCAAA 57.406 29.630 5.39 0.00 0.00 3.68
3023 4506 9.431887 TCGAGATTTATTTACTAGTGCAAAAGT 57.568 29.630 5.39 7.32 0.00 2.66
3032 4515 8.726870 TTTACTAGTGCAAAAGTAAGTCAAGT 57.273 30.769 17.10 0.00 38.89 3.16
3033 4516 6.604735 ACTAGTGCAAAAGTAAGTCAAGTG 57.395 37.500 0.00 0.00 0.00 3.16
3034 4517 6.113411 ACTAGTGCAAAAGTAAGTCAAGTGT 58.887 36.000 0.00 0.00 0.00 3.55
3035 4518 5.897377 AGTGCAAAAGTAAGTCAAGTGTT 57.103 34.783 0.00 0.00 0.00 3.32
3036 4519 6.267496 AGTGCAAAAGTAAGTCAAGTGTTT 57.733 33.333 0.00 0.00 0.00 2.83
3037 4520 6.687604 AGTGCAAAAGTAAGTCAAGTGTTTT 58.312 32.000 0.00 0.00 0.00 2.43
3038 4521 6.586082 AGTGCAAAAGTAAGTCAAGTGTTTTG 59.414 34.615 0.00 0.00 37.74 2.44
3039 4522 6.364976 GTGCAAAAGTAAGTCAAGTGTTTTGT 59.635 34.615 0.00 0.00 37.26 2.83
3040 4523 6.584563 TGCAAAAGTAAGTCAAGTGTTTTGTC 59.415 34.615 0.00 0.00 37.26 3.18
3041 4524 6.584563 GCAAAAGTAAGTCAAGTGTTTTGTCA 59.415 34.615 0.00 0.00 37.26 3.58
3042 4525 7.115663 GCAAAAGTAAGTCAAGTGTTTTGTCAA 59.884 33.333 0.00 0.00 37.26 3.18
3043 4526 8.973378 CAAAAGTAAGTCAAGTGTTTTGTCAAA 58.027 29.630 0.00 0.00 32.65 2.69
3044 4527 9.535878 AAAAGTAAGTCAAGTGTTTTGTCAAAA 57.464 25.926 6.65 6.65 0.00 2.44
3045 4528 9.705290 AAAGTAAGTCAAGTGTTTTGTCAAAAT 57.295 25.926 13.65 0.00 32.22 1.82
3048 4531 9.783256 GTAAGTCAAGTGTTTTGTCAAAATAGT 57.217 29.630 13.65 11.04 32.22 2.12
3050 4533 8.911247 AGTCAAGTGTTTTGTCAAAATAGTTC 57.089 30.769 19.36 12.43 34.29 3.01
3051 4534 8.739972 AGTCAAGTGTTTTGTCAAAATAGTTCT 58.260 29.630 19.36 13.92 34.29 3.01
3052 4535 9.353999 GTCAAGTGTTTTGTCAAAATAGTTCTT 57.646 29.630 19.36 11.77 34.29 2.52
3055 4538 9.797556 AAGTGTTTTGTCAAAATAGTTCTTACC 57.202 29.630 17.46 2.76 31.98 2.85
3056 4539 9.185680 AGTGTTTTGTCAAAATAGTTCTTACCT 57.814 29.630 13.65 0.34 32.22 3.08
3123 4606 5.996644 TGTATATACACCCAGGAACCAAAG 58.003 41.667 11.62 0.00 0.00 2.77
3124 4607 5.489637 TGTATATACACCCAGGAACCAAAGT 59.510 40.000 11.62 0.00 0.00 2.66
3125 4608 2.649531 TACACCCAGGAACCAAAGTG 57.350 50.000 0.00 0.00 0.00 3.16
3126 4609 0.629058 ACACCCAGGAACCAAAGTGT 59.371 50.000 0.00 6.87 33.81 3.55
3127 4610 1.847737 ACACCCAGGAACCAAAGTGTA 59.152 47.619 9.76 0.00 36.73 2.90
3128 4611 2.445525 ACACCCAGGAACCAAAGTGTAT 59.554 45.455 9.76 0.00 36.73 2.29
3129 4612 3.117284 ACACCCAGGAACCAAAGTGTATT 60.117 43.478 9.76 0.00 36.73 1.89
3130 4613 3.895041 CACCCAGGAACCAAAGTGTATTT 59.105 43.478 0.00 0.00 0.00 1.40
3131 4614 4.022329 CACCCAGGAACCAAAGTGTATTTC 60.022 45.833 0.00 0.00 0.00 2.17
3132 4615 3.509967 CCCAGGAACCAAAGTGTATTTCC 59.490 47.826 0.00 0.00 36.71 3.13
3133 4616 3.509967 CCAGGAACCAAAGTGTATTTCCC 59.490 47.826 0.00 0.00 37.09 3.97
3134 4617 4.148838 CAGGAACCAAAGTGTATTTCCCA 58.851 43.478 0.00 0.00 37.09 4.37
3135 4618 4.772100 CAGGAACCAAAGTGTATTTCCCAT 59.228 41.667 0.00 0.00 37.09 4.00
3136 4619 5.016831 AGGAACCAAAGTGTATTTCCCATC 58.983 41.667 0.00 0.00 37.09 3.51
3137 4620 5.016831 GGAACCAAAGTGTATTTCCCATCT 58.983 41.667 0.00 0.00 31.19 2.90
3138 4621 6.011981 AGGAACCAAAGTGTATTTCCCATCTA 60.012 38.462 0.00 0.00 37.09 1.98
3139 4622 6.661805 GGAACCAAAGTGTATTTCCCATCTAA 59.338 38.462 0.00 0.00 31.19 2.10
3140 4623 7.148069 GGAACCAAAGTGTATTTCCCATCTAAG 60.148 40.741 0.00 0.00 31.19 2.18
3141 4624 6.790319 ACCAAAGTGTATTTCCCATCTAAGT 58.210 36.000 0.00 0.00 0.00 2.24
3142 4625 6.884836 ACCAAAGTGTATTTCCCATCTAAGTC 59.115 38.462 0.00 0.00 0.00 3.01
3143 4626 6.884295 CCAAAGTGTATTTCCCATCTAAGTCA 59.116 38.462 0.00 0.00 0.00 3.41
3144 4627 7.557719 CCAAAGTGTATTTCCCATCTAAGTCAT 59.442 37.037 0.00 0.00 0.00 3.06
3145 4628 9.613428 CAAAGTGTATTTCCCATCTAAGTCATA 57.387 33.333 0.00 0.00 0.00 2.15
3147 4630 9.784531 AAGTGTATTTCCCATCTAAGTCATATG 57.215 33.333 0.00 0.00 0.00 1.78
3148 4631 8.938883 AGTGTATTTCCCATCTAAGTCATATGT 58.061 33.333 1.90 0.00 0.00 2.29
3149 4632 9.209175 GTGTATTTCCCATCTAAGTCATATGTC 57.791 37.037 1.90 0.00 0.00 3.06
3150 4633 8.933653 TGTATTTCCCATCTAAGTCATATGTCA 58.066 33.333 1.90 0.00 0.00 3.58
3151 4634 9.950496 GTATTTCCCATCTAAGTCATATGTCAT 57.050 33.333 1.90 0.00 0.00 3.06
3153 4636 8.681486 TTTCCCATCTAAGTCATATGTCATTG 57.319 34.615 1.90 0.00 0.00 2.82
3154 4637 7.616528 TCCCATCTAAGTCATATGTCATTGA 57.383 36.000 1.90 0.00 0.00 2.57
3155 4638 8.211030 TCCCATCTAAGTCATATGTCATTGAT 57.789 34.615 1.90 0.00 0.00 2.57
3156 4639 8.316946 TCCCATCTAAGTCATATGTCATTGATC 58.683 37.037 1.90 0.00 0.00 2.92
3157 4640 8.319881 CCCATCTAAGTCATATGTCATTGATCT 58.680 37.037 1.90 0.00 0.00 2.75
3158 4641 9.722184 CCATCTAAGTCATATGTCATTGATCTT 57.278 33.333 1.90 4.98 0.00 2.40
3163 4646 7.649370 AGTCATATGTCATTGATCTTAAGCG 57.351 36.000 1.90 0.00 0.00 4.68
3164 4647 6.648310 AGTCATATGTCATTGATCTTAAGCGG 59.352 38.462 1.90 0.00 0.00 5.52
3165 4648 6.646653 GTCATATGTCATTGATCTTAAGCGGA 59.353 38.462 1.90 0.00 0.00 5.54
3166 4649 6.870439 TCATATGTCATTGATCTTAAGCGGAG 59.130 38.462 1.90 0.00 0.00 4.63
3167 4650 4.471904 TGTCATTGATCTTAAGCGGAGT 57.528 40.909 0.00 0.00 0.00 3.85
3168 4651 4.832248 TGTCATTGATCTTAAGCGGAGTT 58.168 39.130 0.00 0.00 0.00 3.01
3169 4652 5.245531 TGTCATTGATCTTAAGCGGAGTTT 58.754 37.500 0.00 0.00 33.78 2.66
3170 4653 5.351465 TGTCATTGATCTTAAGCGGAGTTTC 59.649 40.000 0.00 0.00 30.33 2.78
3171 4654 4.566759 TCATTGATCTTAAGCGGAGTTTCG 59.433 41.667 0.00 0.00 30.33 3.46
3172 4655 3.587797 TGATCTTAAGCGGAGTTTCGT 57.412 42.857 0.00 0.00 30.33 3.85
3173 4656 3.250744 TGATCTTAAGCGGAGTTTCGTG 58.749 45.455 0.00 0.00 30.33 4.35
3174 4657 2.806608 TCTTAAGCGGAGTTTCGTGT 57.193 45.000 0.00 0.00 30.33 4.49
3175 4658 2.400399 TCTTAAGCGGAGTTTCGTGTG 58.600 47.619 0.00 0.00 30.33 3.82
3176 4659 1.459592 CTTAAGCGGAGTTTCGTGTGG 59.540 52.381 0.00 0.00 30.33 4.17
3177 4660 0.320073 TAAGCGGAGTTTCGTGTGGG 60.320 55.000 0.00 0.00 30.33 4.61
3178 4661 2.280592 GCGGAGTTTCGTGTGGGT 60.281 61.111 0.00 0.00 0.00 4.51
3179 4662 1.005867 GCGGAGTTTCGTGTGGGTA 60.006 57.895 0.00 0.00 0.00 3.69
3180 4663 0.390735 GCGGAGTTTCGTGTGGGTAT 60.391 55.000 0.00 0.00 0.00 2.73
3181 4664 1.942586 GCGGAGTTTCGTGTGGGTATT 60.943 52.381 0.00 0.00 0.00 1.89
3182 4665 2.419667 CGGAGTTTCGTGTGGGTATTT 58.580 47.619 0.00 0.00 0.00 1.40
3183 4666 2.809696 CGGAGTTTCGTGTGGGTATTTT 59.190 45.455 0.00 0.00 0.00 1.82
3184 4667 3.120442 CGGAGTTTCGTGTGGGTATTTTC 60.120 47.826 0.00 0.00 0.00 2.29
3185 4668 4.070009 GGAGTTTCGTGTGGGTATTTTCT 58.930 43.478 0.00 0.00 0.00 2.52
3186 4669 4.517832 GGAGTTTCGTGTGGGTATTTTCTT 59.482 41.667 0.00 0.00 0.00 2.52
3187 4670 5.009310 GGAGTTTCGTGTGGGTATTTTCTTT 59.991 40.000 0.00 0.00 0.00 2.52
3188 4671 6.068473 AGTTTCGTGTGGGTATTTTCTTTC 57.932 37.500 0.00 0.00 0.00 2.62
3189 4672 5.009310 AGTTTCGTGTGGGTATTTTCTTTCC 59.991 40.000 0.00 0.00 0.00 3.13
3190 4673 4.360951 TCGTGTGGGTATTTTCTTTCCT 57.639 40.909 0.00 0.00 0.00 3.36
3191 4674 4.721132 TCGTGTGGGTATTTTCTTTCCTT 58.279 39.130 0.00 0.00 0.00 3.36
3192 4675 5.134661 TCGTGTGGGTATTTTCTTTCCTTT 58.865 37.500 0.00 0.00 0.00 3.11
3193 4676 5.595133 TCGTGTGGGTATTTTCTTTCCTTTT 59.405 36.000 0.00 0.00 0.00 2.27
3194 4677 6.097129 TCGTGTGGGTATTTTCTTTCCTTTTT 59.903 34.615 0.00 0.00 0.00 1.94
3195 4678 7.284944 TCGTGTGGGTATTTTCTTTCCTTTTTA 59.715 33.333 0.00 0.00 0.00 1.52
3196 4679 8.085909 CGTGTGGGTATTTTCTTTCCTTTTTAT 58.914 33.333 0.00 0.00 0.00 1.40
3212 4695 9.793259 TTCCTTTTTATACTTGATTGAGTCACT 57.207 29.630 0.00 0.00 36.32 3.41
3232 4718 8.883731 AGTCACTTATTAATTTGATTCTCCACG 58.116 33.333 0.00 0.00 0.00 4.94
3255 4741 3.886505 TGTAGGTGTGGATTGGTGAAAAC 59.113 43.478 0.00 0.00 0.00 2.43
3338 4830 4.083217 TCGCCGTGCTTGTTTTATAATGTT 60.083 37.500 0.00 0.00 0.00 2.71
3349 4842 5.157781 GTTTTATAATGTTCGGCTTGCACA 58.842 37.500 0.00 0.00 0.00 4.57
3357 4854 1.164411 TCGGCTTGCACAAACTATGG 58.836 50.000 0.00 0.00 0.00 2.74
3401 4901 6.788598 ACTACTGATCAATCATCACTGACT 57.211 37.500 0.00 0.00 36.51 3.41
3404 4904 5.662456 ACTGATCAATCATCACTGACTGAG 58.338 41.667 0.00 0.00 40.63 3.35
3410 4910 3.160679 TCATCACTGACTGAGACCTGA 57.839 47.619 0.00 0.00 30.20 3.86
3412 4912 2.364972 TCACTGACTGAGACCTGACA 57.635 50.000 0.00 0.00 0.00 3.58
3444 4944 3.628280 GAGCCTGTCACGGTCGACC 62.628 68.421 25.28 25.28 34.88 4.79
3450 4950 0.038618 TGTCACGGTCGACCAAGATG 60.039 55.000 32.80 23.20 34.88 2.90
3475 4975 8.356657 TGGTTAACATTGACTGGTCTAAAAATG 58.643 33.333 8.10 6.23 0.00 2.32
3476 4976 7.328493 GGTTAACATTGACTGGTCTAAAAATGC 59.672 37.037 8.10 0.00 0.00 3.56
3481 4986 5.186256 TGACTGGTCTAAAAATGCCCATA 57.814 39.130 2.38 0.00 0.00 2.74
3494 4999 7.494922 AAAATGCCCATAATAAGGTGTTCTT 57.505 32.000 0.00 0.00 39.40 2.52
3495 5000 6.715347 AATGCCCATAATAAGGTGTTCTTC 57.285 37.500 0.00 0.00 36.93 2.87
3497 5002 4.017958 TGCCCATAATAAGGTGTTCTTCCA 60.018 41.667 0.00 0.00 36.93 3.53
3498 5003 4.338400 GCCCATAATAAGGTGTTCTTCCAC 59.662 45.833 0.00 0.00 36.93 4.02
3507 5012 2.162681 GTGTTCTTCCACCTCCATTGG 58.837 52.381 0.00 0.00 35.18 3.16
3508 5013 1.075374 TGTTCTTCCACCTCCATTGGG 59.925 52.381 2.09 0.00 34.56 4.12
3509 5014 0.039618 TTCTTCCACCTCCATTGGGC 59.960 55.000 2.09 0.00 34.56 5.36
3510 5015 1.380380 CTTCCACCTCCATTGGGCC 60.380 63.158 2.09 0.00 34.56 5.80
3511 5016 2.153898 CTTCCACCTCCATTGGGCCA 62.154 60.000 0.00 0.00 34.56 5.36
3512 5017 1.517538 TTCCACCTCCATTGGGCCAT 61.518 55.000 7.26 0.00 34.56 4.40
3513 5018 1.759299 CCACCTCCATTGGGCCATG 60.759 63.158 7.26 8.05 0.00 3.66
3514 5019 2.042639 ACCTCCATTGGGCCATGC 60.043 61.111 7.26 0.00 0.00 4.06
3515 5020 3.221389 CCTCCATTGGGCCATGCG 61.221 66.667 7.26 0.00 0.00 4.73
3516 5021 3.221389 CTCCATTGGGCCATGCGG 61.221 66.667 7.26 8.70 0.00 5.69
3517 5022 3.719646 CTCCATTGGGCCATGCGGA 62.720 63.158 7.26 12.93 0.00 5.54
3519 5024 2.732016 CATTGGGCCATGCGGATG 59.268 61.111 7.26 10.35 0.00 3.51
3520 5025 1.829096 CATTGGGCCATGCGGATGA 60.829 57.895 19.50 0.00 0.00 2.92
3521 5026 1.076118 ATTGGGCCATGCGGATGAA 60.076 52.632 19.50 4.79 0.00 2.57
3522 5027 0.687098 ATTGGGCCATGCGGATGAAA 60.687 50.000 19.50 7.52 0.00 2.69
3523 5028 0.687098 TTGGGCCATGCGGATGAAAT 60.687 50.000 19.50 0.00 0.00 2.17
3526 5031 1.134431 GGGCCATGCGGATGAAATTTT 60.134 47.619 19.50 0.00 0.00 1.82
3527 5032 1.935199 GGCCATGCGGATGAAATTTTG 59.065 47.619 19.50 0.37 0.00 2.44
3529 5034 2.604462 GCCATGCGGATGAAATTTTGTC 59.396 45.455 19.50 0.00 0.00 3.18
3530 5035 3.847542 CCATGCGGATGAAATTTTGTCA 58.152 40.909 19.50 0.00 0.00 3.58
3531 5036 3.613737 CCATGCGGATGAAATTTTGTCAC 59.386 43.478 19.50 0.00 0.00 3.67
3532 5037 3.998099 TGCGGATGAAATTTTGTCACA 57.002 38.095 0.00 0.00 0.00 3.58
3533 5038 3.899734 TGCGGATGAAATTTTGTCACAG 58.100 40.909 0.00 0.00 0.00 3.66
3534 5039 3.567585 TGCGGATGAAATTTTGTCACAGA 59.432 39.130 0.00 0.00 0.00 3.41
3537 5042 5.097529 CGGATGAAATTTTGTCACAGATGG 58.902 41.667 0.00 0.00 0.00 3.51
3538 5043 5.413499 GGATGAAATTTTGTCACAGATGGG 58.587 41.667 0.00 0.00 0.00 4.00
3540 5045 3.006752 TGAAATTTTGTCACAGATGGGCC 59.993 43.478 0.00 0.00 0.00 5.80
3541 5046 1.176527 ATTTTGTCACAGATGGGCCG 58.823 50.000 0.00 0.00 0.00 6.13
3542 5047 0.179004 TTTTGTCACAGATGGGCCGT 60.179 50.000 0.00 0.00 0.00 5.68
3544 5049 1.763546 TTGTCACAGATGGGCCGTCA 61.764 55.000 26.86 3.84 0.00 4.35
3548 5053 1.768275 TCACAGATGGGCCGTCATATT 59.232 47.619 26.86 3.84 0.00 1.28
3549 5054 2.172505 TCACAGATGGGCCGTCATATTT 59.827 45.455 26.86 3.44 0.00 1.40
3550 5055 2.291465 CACAGATGGGCCGTCATATTTG 59.709 50.000 26.86 17.69 0.00 2.32
3551 5056 1.881973 CAGATGGGCCGTCATATTTGG 59.118 52.381 26.86 4.28 0.00 3.28
3557 5062 1.782028 GCCGTCATATTTGGCCGGTC 61.782 60.000 0.00 0.00 43.06 4.79
3558 5063 0.179056 CCGTCATATTTGGCCGGTCT 60.179 55.000 7.97 0.00 34.83 3.85
3559 5064 1.069513 CCGTCATATTTGGCCGGTCTA 59.930 52.381 7.97 0.00 34.83 2.59
3561 5066 2.736721 CGTCATATTTGGCCGGTCTATG 59.263 50.000 7.97 7.58 0.00 2.23
3562 5067 3.554129 CGTCATATTTGGCCGGTCTATGA 60.554 47.826 7.97 10.08 0.00 2.15
3563 5068 4.579869 GTCATATTTGGCCGGTCTATGAT 58.420 43.478 16.73 4.90 32.97 2.45
3564 5069 5.623596 CGTCATATTTGGCCGGTCTATGATA 60.624 44.000 16.73 6.71 32.97 2.15
3565 5070 5.812642 GTCATATTTGGCCGGTCTATGATAG 59.187 44.000 16.73 0.00 32.97 2.08
3567 5072 3.469008 TTTGGCCGGTCTATGATAGTG 57.531 47.619 7.97 0.00 0.00 2.74
3570 5075 1.272769 GGCCGGTCTATGATAGTGGTC 59.727 57.143 1.90 0.00 0.00 4.02
3571 5076 1.272769 GCCGGTCTATGATAGTGGTCC 59.727 57.143 1.90 0.00 0.00 4.46
3572 5077 2.594131 CCGGTCTATGATAGTGGTCCA 58.406 52.381 0.00 0.00 0.00 4.02
3574 5079 3.193691 CCGGTCTATGATAGTGGTCCATC 59.806 52.174 0.00 0.00 0.00 3.51
3575 5080 3.826729 CGGTCTATGATAGTGGTCCATCA 59.173 47.826 0.00 0.00 35.72 3.07
3576 5081 4.321304 CGGTCTATGATAGTGGTCCATCAC 60.321 50.000 0.00 0.00 34.15 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.413837 GCTTACTCAGCGAAAACCAGA 58.586 47.619 0.00 0.00 39.29 3.86
28 29 3.088532 TGGCCAATCAACAGGTCATAAC 58.911 45.455 0.61 0.00 33.91 1.89
76 89 3.553828 TCAAAGTTTGACCCGAGAAGT 57.446 42.857 14.35 0.00 34.08 3.01
388 406 6.238925 CCCGAGTTCACTCTTTTAAAATGGTT 60.239 38.462 0.09 0.00 40.75 3.67
392 410 6.296803 AGTCCCGAGTTCACTCTTTTAAAAT 58.703 36.000 0.09 0.00 40.75 1.82
393 411 5.677567 AGTCCCGAGTTCACTCTTTTAAAA 58.322 37.500 5.44 0.00 40.75 1.52
401 419 6.880942 AGTATATTAGTCCCGAGTTCACTC 57.119 41.667 0.00 0.00 39.55 3.51
436 454 8.835439 TCTTTGGCAAAAATAACTGGAAATTTC 58.165 29.630 14.43 9.83 0.00 2.17
485 504 4.466015 TGACAAAGAAAGGGCTGAAAAAGT 59.534 37.500 0.00 0.00 0.00 2.66
487 506 5.413309 TTGACAAAGAAAGGGCTGAAAAA 57.587 34.783 0.00 0.00 0.00 1.94
607 630 4.583871 AGGGTGTTTTTGCAATTTGTTCA 58.416 34.783 0.00 0.00 0.00 3.18
702 727 1.887707 GTAGGCCGGGCTTTGATCG 60.888 63.158 37.40 0.00 0.00 3.69
713 738 2.618053 CTGGTTTCACTAAGTAGGCCG 58.382 52.381 0.00 0.00 0.00 6.13
722 747 2.703536 TCTGCTGAACCTGGTTTCACTA 59.296 45.455 14.28 0.00 32.02 2.74
733 758 2.037772 TCAACCTTCTCTCTGCTGAACC 59.962 50.000 0.00 0.00 0.00 3.62
756 781 5.278957 CCCCAAATTATCAAAATCGGCTAGG 60.279 44.000 0.00 0.00 0.00 3.02
776 801 7.181361 TCAAATCATCTTAAGATTCAACCCCA 58.819 34.615 15.49 0.00 34.78 4.96
819 844 6.246163 ACCTTTAACCCTTCCATCTGTTTAG 58.754 40.000 0.00 0.00 0.00 1.85
822 847 4.741928 ACCTTTAACCCTTCCATCTGTT 57.258 40.909 0.00 0.00 0.00 3.16
823 848 4.741928 AACCTTTAACCCTTCCATCTGT 57.258 40.909 0.00 0.00 0.00 3.41
951 1958 7.335627 TGGTACGGATCAAAATAAGTGAATCT 58.664 34.615 0.00 0.00 0.00 2.40
958 1965 6.238648 GGGACAATGGTACGGATCAAAATAAG 60.239 42.308 0.00 0.00 0.00 1.73
967 1974 0.750850 CTCGGGACAATGGTACGGAT 59.249 55.000 0.00 0.00 36.69 4.18
970 1977 1.876714 CGCTCGGGACAATGGTACG 60.877 63.158 0.00 0.00 0.00 3.67
975 1982 2.892425 GAGCCGCTCGGGACAATG 60.892 66.667 4.23 0.00 38.47 2.82
1031 2213 3.063485 TCGATGATCAACGTTTCTTGCA 58.937 40.909 22.53 0.56 0.00 4.08
1032 2214 3.722555 TCGATGATCAACGTTTCTTGC 57.277 42.857 22.53 0.00 0.00 4.01
1033 2215 5.005682 TGCTATCGATGATCAACGTTTCTTG 59.994 40.000 22.53 10.70 0.00 3.02
1083 2265 1.136110 GGGCAGTAGAAGAGCTCACTC 59.864 57.143 17.77 11.98 43.82 3.51
1119 2301 0.396139 ATTTGTGGATGATGGGCGCT 60.396 50.000 7.64 0.00 0.00 5.92
1182 2367 2.125673 ACAGCGATGTACGTGGCC 60.126 61.111 17.32 0.00 44.60 5.36
1187 2372 1.142185 CTGCCTCACAGCGATGTACG 61.142 60.000 5.75 0.00 40.19 3.67
1217 2402 1.878522 CATTCGACGGGAAGAGCGG 60.879 63.158 0.00 0.00 38.24 5.52
1249 2434 2.182030 GAGGAGGCCGTCTTCGTG 59.818 66.667 0.00 0.00 35.01 4.35
1291 2476 6.712095 TCGAGTAGAGACTAGAGAGTAGGTAG 59.288 46.154 0.00 0.00 35.45 3.18
1292 2477 6.600388 TCGAGTAGAGACTAGAGAGTAGGTA 58.400 44.000 0.00 0.00 35.45 3.08
1293 2478 5.448654 TCGAGTAGAGACTAGAGAGTAGGT 58.551 45.833 0.00 0.00 35.45 3.08
1294 2479 6.433404 AGATCGAGTAGAGACTAGAGAGTAGG 59.567 46.154 0.00 0.00 40.19 3.18
1301 2486 6.127281 ACACAAGAGATCGAGTAGAGACTAGA 60.127 42.308 0.00 0.00 40.97 2.43
1314 2499 2.494059 ACCACCAAACACAAGAGATCG 58.506 47.619 0.00 0.00 0.00 3.69
1325 2510 3.744660 ACTCATCTCTGAACCACCAAAC 58.255 45.455 0.00 0.00 0.00 2.93
1326 2511 4.437682 AACTCATCTCTGAACCACCAAA 57.562 40.909 0.00 0.00 0.00 3.28
1328 2513 3.743521 CAAACTCATCTCTGAACCACCA 58.256 45.455 0.00 0.00 0.00 4.17
1329 2514 2.485814 GCAAACTCATCTCTGAACCACC 59.514 50.000 0.00 0.00 0.00 4.61
1330 2515 3.406764 AGCAAACTCATCTCTGAACCAC 58.593 45.455 0.00 0.00 0.00 4.16
1331 2516 3.668447 GAGCAAACTCATCTCTGAACCA 58.332 45.455 0.00 0.00 42.93 3.67
1332 2517 2.670414 CGAGCAAACTCATCTCTGAACC 59.330 50.000 0.00 0.00 43.66 3.62
1333 2518 2.093467 GCGAGCAAACTCATCTCTGAAC 59.907 50.000 0.00 0.00 43.66 3.18
1334 2519 2.341257 GCGAGCAAACTCATCTCTGAA 58.659 47.619 0.00 0.00 43.66 3.02
1335 2520 1.404717 GGCGAGCAAACTCATCTCTGA 60.405 52.381 0.00 0.00 43.66 3.27
1336 2521 1.005340 GGCGAGCAAACTCATCTCTG 58.995 55.000 0.00 0.00 43.66 3.35
1337 2522 0.459237 CGGCGAGCAAACTCATCTCT 60.459 55.000 0.00 0.00 43.66 3.10
1338 2523 0.458543 TCGGCGAGCAAACTCATCTC 60.459 55.000 4.99 0.00 43.66 2.75
1339 2524 0.737715 GTCGGCGAGCAAACTCATCT 60.738 55.000 11.20 0.00 43.66 2.90
1340 2525 1.696832 GGTCGGCGAGCAAACTCATC 61.697 60.000 31.62 6.25 43.66 2.92
1341 2526 1.741770 GGTCGGCGAGCAAACTCAT 60.742 57.895 31.62 0.00 43.66 2.90
1342 2527 2.357034 GGTCGGCGAGCAAACTCA 60.357 61.111 31.62 0.00 43.66 3.41
1343 2528 3.119096 GGGTCGGCGAGCAAACTC 61.119 66.667 35.72 17.58 39.75 3.01
1344 2529 4.699522 GGGGTCGGCGAGCAAACT 62.700 66.667 35.72 0.00 0.00 2.66
1352 2537 3.952628 GAGTTCCTTGGGGTCGGCG 62.953 68.421 0.00 0.00 0.00 6.46
1357 2542 4.157246 GGTTAATTTGAGTTCCTTGGGGT 58.843 43.478 0.00 0.00 0.00 4.95
1361 2546 4.416516 AGGGGGTTAATTTGAGTTCCTTG 58.583 43.478 0.00 0.00 0.00 3.61
1389 2575 0.107214 GGGGTCGATTTCATGCCTGA 60.107 55.000 0.00 0.00 0.00 3.86
1401 2587 2.123208 TGACTGTGGTGGGGTCGA 60.123 61.111 0.00 0.00 33.21 4.20
1402 2588 2.030562 GTGACTGTGGTGGGGTCG 59.969 66.667 0.00 0.00 33.21 4.79
1403 2589 2.430367 GGTGACTGTGGTGGGGTC 59.570 66.667 0.00 0.00 0.00 4.46
1404 2590 3.556306 CGGTGACTGTGGTGGGGT 61.556 66.667 0.00 0.00 0.00 4.95
1405 2591 3.238497 TCGGTGACTGTGGTGGGG 61.238 66.667 0.00 0.00 0.00 4.96
1407 2593 2.355837 CGTCGGTGACTGTGGTGG 60.356 66.667 0.00 0.00 0.00 4.61
1418 2613 1.338674 TGAATCTTCATTGCCGTCGGT 60.339 47.619 13.94 0.00 31.01 4.69
1423 2618 0.378257 CCGGTGAATCTTCATTGCCG 59.622 55.000 11.46 11.46 41.36 5.69
1446 2641 4.382320 GCCTACCGTTGCCGTCCA 62.382 66.667 0.00 0.00 0.00 4.02
1549 2768 0.878961 GTCGACGGGAAACACAGCTT 60.879 55.000 0.00 0.00 0.00 3.74
1561 2780 4.813526 CGTCCTCGCAGTCGACGG 62.814 72.222 11.64 11.64 42.77 4.79
1585 2804 0.679505 AGTAGAAGTGCTTGCCGTCA 59.320 50.000 0.00 0.00 0.00 4.35
1732 3086 2.033911 TGCTGCGGCATCTTTCCA 59.966 55.556 18.37 0.00 44.28 3.53
1767 3121 2.033448 GCAACATGTCCACGGGGA 59.967 61.111 0.00 0.00 42.29 4.81
1867 3227 1.073897 GCTGAACTTGAGGGTGCCT 59.926 57.895 0.00 0.00 36.03 4.75
1925 3285 1.343465 CTTCAAGACCACGTACTGGGT 59.657 52.381 13.68 9.94 45.78 4.51
1938 3298 1.270305 CCTTGTCGTCCAGCTTCAAGA 60.270 52.381 0.00 0.00 38.06 3.02
1940 3300 0.468226 ACCTTGTCGTCCAGCTTCAA 59.532 50.000 0.00 0.00 0.00 2.69
1941 3301 0.033504 GACCTTGTCGTCCAGCTTCA 59.966 55.000 0.00 0.00 0.00 3.02
1965 3325 2.513666 GGTGCGGGCATTCGATGA 60.514 61.111 0.00 0.00 0.00 2.92
1996 3356 0.616395 TCTCCGGCTCAATGGTACCA 60.616 55.000 18.99 18.99 0.00 3.25
2046 3406 1.101049 CAGCAAACCCCACTTGTCGT 61.101 55.000 0.00 0.00 0.00 4.34
2392 3777 4.753516 ACGTAGGATGATGGATTTGACA 57.246 40.909 0.00 0.00 0.00 3.58
2573 4024 3.181505 CCAACCAAATCGTTATTAGCGCA 60.182 43.478 11.47 0.00 0.00 6.09
2604 4063 1.545651 GGCTTGGTGGTAAGAAGCTGT 60.546 52.381 0.00 0.00 41.55 4.40
2605 4064 1.168714 GGCTTGGTGGTAAGAAGCTG 58.831 55.000 0.00 0.00 41.55 4.24
2607 4066 1.305930 CCGGCTTGGTGGTAAGAAGC 61.306 60.000 0.00 0.00 41.18 3.86
2608 4067 1.305930 GCCGGCTTGGTGGTAAGAAG 61.306 60.000 22.15 0.00 41.21 2.85
2646 4110 8.593945 ATTAATAAAGGCTTGAGGAAACATGA 57.406 30.769 0.00 0.00 0.00 3.07
2688 4171 8.870116 TGCAATACTTATGGTAGATGTAGATGT 58.130 33.333 0.00 0.00 33.51 3.06
2691 4174 8.245195 TGTGCAATACTTATGGTAGATGTAGA 57.755 34.615 0.00 0.00 33.51 2.59
2692 4175 9.144747 GATGTGCAATACTTATGGTAGATGTAG 57.855 37.037 0.00 0.00 33.51 2.74
2693 4176 8.870116 AGATGTGCAATACTTATGGTAGATGTA 58.130 33.333 0.00 0.00 33.51 2.29
2694 4177 7.739825 AGATGTGCAATACTTATGGTAGATGT 58.260 34.615 0.00 0.00 33.51 3.06
2695 4178 9.710900 TTAGATGTGCAATACTTATGGTAGATG 57.289 33.333 0.00 0.00 33.51 2.90
2697 4180 8.924303 ACTTAGATGTGCAATACTTATGGTAGA 58.076 33.333 0.00 0.00 33.51 2.59
2698 4181 9.197694 GACTTAGATGTGCAATACTTATGGTAG 57.802 37.037 0.00 0.00 33.51 3.18
2699 4182 8.700973 TGACTTAGATGTGCAATACTTATGGTA 58.299 33.333 0.00 0.00 34.62 3.25
2700 4183 7.564793 TGACTTAGATGTGCAATACTTATGGT 58.435 34.615 0.00 0.00 0.00 3.55
2701 4184 7.172190 CCTGACTTAGATGTGCAATACTTATGG 59.828 40.741 0.00 0.00 0.00 2.74
2702 4185 7.928167 TCCTGACTTAGATGTGCAATACTTATG 59.072 37.037 0.00 0.00 0.00 1.90
2704 4187 7.417911 CCTCCTGACTTAGATGTGCAATACTTA 60.418 40.741 0.00 0.00 0.00 2.24
2706 4189 5.163364 CCTCCTGACTTAGATGTGCAATACT 60.163 44.000 0.00 0.00 0.00 2.12
2707 4190 5.053145 CCTCCTGACTTAGATGTGCAATAC 58.947 45.833 0.00 0.00 0.00 1.89
2709 4192 3.118112 CCCTCCTGACTTAGATGTGCAAT 60.118 47.826 0.00 0.00 0.00 3.56
2710 4193 2.237143 CCCTCCTGACTTAGATGTGCAA 59.763 50.000 0.00 0.00 0.00 4.08
2711 4194 1.833630 CCCTCCTGACTTAGATGTGCA 59.166 52.381 0.00 0.00 0.00 4.57
2712 4195 1.139853 CCCCTCCTGACTTAGATGTGC 59.860 57.143 0.00 0.00 0.00 4.57
2713 4196 2.752030 TCCCCTCCTGACTTAGATGTG 58.248 52.381 0.00 0.00 0.00 3.21
2714 4197 3.108376 GTTCCCCTCCTGACTTAGATGT 58.892 50.000 0.00 0.00 0.00 3.06
2715 4198 3.379452 AGTTCCCCTCCTGACTTAGATG 58.621 50.000 0.00 0.00 0.00 2.90
2716 4199 3.786213 AGTTCCCCTCCTGACTTAGAT 57.214 47.619 0.00 0.00 0.00 1.98
2717 4200 3.562108 AAGTTCCCCTCCTGACTTAGA 57.438 47.619 0.00 0.00 31.05 2.10
2718 4201 4.327680 CAAAAGTTCCCCTCCTGACTTAG 58.672 47.826 0.00 0.00 32.44 2.18
2719 4202 3.073946 CCAAAAGTTCCCCTCCTGACTTA 59.926 47.826 0.00 0.00 32.44 2.24
2720 4203 2.158460 CCAAAAGTTCCCCTCCTGACTT 60.158 50.000 0.00 0.00 34.03 3.01
2729 4212 2.623239 CCCCATAGACCAAAAGTTCCCC 60.623 54.545 0.00 0.00 0.00 4.81
2730 4213 2.310647 TCCCCATAGACCAAAAGTTCCC 59.689 50.000 0.00 0.00 0.00 3.97
2731 4214 3.245122 TGTCCCCATAGACCAAAAGTTCC 60.245 47.826 0.00 0.00 35.83 3.62
2739 4222 2.371841 GTGCATATGTCCCCATAGACCA 59.628 50.000 4.29 0.00 36.99 4.02
2740 4223 2.290323 GGTGCATATGTCCCCATAGACC 60.290 54.545 4.29 0.00 36.99 3.85
2741 4224 2.290323 GGGTGCATATGTCCCCATAGAC 60.290 54.545 20.72 0.00 36.99 2.59
2743 4226 1.988107 AGGGTGCATATGTCCCCATAG 59.012 52.381 24.95 0.00 41.95 2.23
2744 4227 1.704628 CAGGGTGCATATGTCCCCATA 59.295 52.381 24.95 0.00 41.95 2.74
2745 4228 0.479815 CAGGGTGCATATGTCCCCAT 59.520 55.000 24.95 10.43 41.95 4.00
2747 4230 1.136828 TACAGGGTGCATATGTCCCC 58.863 55.000 24.48 21.88 41.95 4.81
2748 4231 2.553028 CCATACAGGGTGCATATGTCCC 60.553 54.545 22.23 22.23 41.36 4.46
2781 4264 9.843874 GGAATTTTCGACTTTTTGTTGAATTAC 57.156 29.630 0.00 0.00 45.50 1.89
2782 4265 9.810545 AGGAATTTTCGACTTTTTGTTGAATTA 57.189 25.926 0.00 0.00 45.50 1.40
2783 4266 8.603181 CAGGAATTTTCGACTTTTTGTTGAATT 58.397 29.630 0.00 0.00 45.50 2.17
2784 4267 7.978975 TCAGGAATTTTCGACTTTTTGTTGAAT 59.021 29.630 0.00 0.00 45.50 2.57
2785 4268 7.316640 TCAGGAATTTTCGACTTTTTGTTGAA 58.683 30.769 0.00 0.00 44.79 2.69
2786 4269 6.857956 TCAGGAATTTTCGACTTTTTGTTGA 58.142 32.000 0.00 0.00 37.30 3.18
2787 4270 7.518731 TTCAGGAATTTTCGACTTTTTGTTG 57.481 32.000 0.00 0.00 0.00 3.33
2788 4271 8.541133 TTTTCAGGAATTTTCGACTTTTTGTT 57.459 26.923 0.00 0.00 0.00 2.83
2789 4272 8.716646 ATTTTCAGGAATTTTCGACTTTTTGT 57.283 26.923 0.00 0.00 0.00 2.83
2825 4308 9.653287 CATGAGTACAATAGAAGGTCAAGTTTA 57.347 33.333 0.00 0.00 0.00 2.01
2826 4309 8.375506 TCATGAGTACAATAGAAGGTCAAGTTT 58.624 33.333 0.00 0.00 0.00 2.66
2827 4310 7.907389 TCATGAGTACAATAGAAGGTCAAGTT 58.093 34.615 0.00 0.00 0.00 2.66
2828 4311 7.397476 TCTCATGAGTACAATAGAAGGTCAAGT 59.603 37.037 21.92 0.00 0.00 3.16
2829 4312 7.776107 TCTCATGAGTACAATAGAAGGTCAAG 58.224 38.462 21.92 0.00 0.00 3.02
2830 4313 7.718334 TCTCATGAGTACAATAGAAGGTCAA 57.282 36.000 21.92 0.00 0.00 3.18
2831 4314 7.718334 TTCTCATGAGTACAATAGAAGGTCA 57.282 36.000 21.92 0.00 31.74 4.02
2832 4315 9.606631 ATTTTCTCATGAGTACAATAGAAGGTC 57.393 33.333 21.92 0.00 34.63 3.85
2841 4324 9.513906 TGTGGATTTATTTTCTCATGAGTACAA 57.486 29.630 21.92 13.21 0.00 2.41
2842 4325 9.513906 TTGTGGATTTATTTTCTCATGAGTACA 57.486 29.630 21.92 6.63 0.00 2.90
2872 4355 9.987272 CTGAAAAAGAAGTCAAAGGGATATTTT 57.013 29.630 0.00 0.00 0.00 1.82
2873 4356 9.367160 TCTGAAAAAGAAGTCAAAGGGATATTT 57.633 29.630 0.00 0.00 29.54 1.40
2874 4357 8.940397 TCTGAAAAAGAAGTCAAAGGGATATT 57.060 30.769 0.00 0.00 29.54 1.28
2875 4358 8.940397 TTCTGAAAAAGAAGTCAAAGGGATAT 57.060 30.769 0.00 0.00 40.09 1.63
2876 4359 8.760980 TTTCTGAAAAAGAAGTCAAAGGGATA 57.239 30.769 0.00 0.00 45.64 2.59
2877 4360 7.660030 TTTCTGAAAAAGAAGTCAAAGGGAT 57.340 32.000 0.00 0.00 45.64 3.85
2878 4361 7.475137 TTTTCTGAAAAAGAAGTCAAAGGGA 57.525 32.000 12.85 0.00 45.64 4.20
2890 4373 9.064804 GCCAAAAATTTGTCTTTTCTGAAAAAG 57.935 29.630 15.67 10.34 42.04 2.27
2891 4374 8.791675 AGCCAAAAATTTGTCTTTTCTGAAAAA 58.208 25.926 15.67 2.32 36.45 1.94
2892 4375 8.334263 AGCCAAAAATTTGTCTTTTCTGAAAA 57.666 26.923 14.31 14.31 36.45 2.29
2893 4376 7.920160 AGCCAAAAATTTGTCTTTTCTGAAA 57.080 28.000 0.00 0.00 36.45 2.69
2894 4377 9.442047 TTTAGCCAAAAATTTGTCTTTTCTGAA 57.558 25.926 5.27 0.00 36.45 3.02
2895 4378 9.442047 TTTTAGCCAAAAATTTGTCTTTTCTGA 57.558 25.926 5.27 0.00 36.45 3.27
2901 4384 9.830975 ACACTATTTTAGCCAAAAATTTGTCTT 57.169 25.926 11.38 0.00 43.75 3.01
2902 4385 9.260002 CACACTATTTTAGCCAAAAATTTGTCT 57.740 29.630 11.38 0.28 43.75 3.41
2903 4386 9.255304 TCACACTATTTTAGCCAAAAATTTGTC 57.745 29.630 11.38 0.00 43.75 3.18
2904 4387 9.606631 TTCACACTATTTTAGCCAAAAATTTGT 57.393 25.926 11.38 11.68 43.75 2.83
2908 4391 9.586435 GCTATTCACACTATTTTAGCCAAAAAT 57.414 29.630 11.02 11.02 46.92 1.82
2909 4392 7.753132 CGCTATTCACACTATTTTAGCCAAAAA 59.247 33.333 0.00 0.00 41.21 1.94
2910 4393 7.119992 TCGCTATTCACACTATTTTAGCCAAAA 59.880 33.333 0.00 0.00 38.00 2.44
2911 4394 6.596106 TCGCTATTCACACTATTTTAGCCAAA 59.404 34.615 0.00 0.00 30.74 3.28
2912 4395 6.036735 GTCGCTATTCACACTATTTTAGCCAA 59.963 38.462 0.00 0.00 30.74 4.52
2913 4396 5.522460 GTCGCTATTCACACTATTTTAGCCA 59.478 40.000 0.00 0.00 30.74 4.75
2914 4397 5.050295 GGTCGCTATTCACACTATTTTAGCC 60.050 44.000 0.00 0.00 30.74 3.93
2915 4398 5.753921 AGGTCGCTATTCACACTATTTTAGC 59.246 40.000 0.00 0.00 0.00 3.09
2918 4401 9.998106 ATTATAGGTCGCTATTCACACTATTTT 57.002 29.630 0.00 0.00 0.00 1.82
2921 4404 8.407064 GCTATTATAGGTCGCTATTCACACTAT 58.593 37.037 1.12 0.00 0.00 2.12
2922 4405 7.392393 TGCTATTATAGGTCGCTATTCACACTA 59.608 37.037 1.12 0.00 0.00 2.74
2923 4406 6.208797 TGCTATTATAGGTCGCTATTCACACT 59.791 38.462 1.12 0.00 0.00 3.55
2924 4407 6.387465 TGCTATTATAGGTCGCTATTCACAC 58.613 40.000 1.12 0.00 0.00 3.82
2925 4408 6.584185 TGCTATTATAGGTCGCTATTCACA 57.416 37.500 1.12 0.00 0.00 3.58
2926 4409 7.884816 TTTGCTATTATAGGTCGCTATTCAC 57.115 36.000 1.12 0.00 0.00 3.18
2963 4446 4.799564 AAAGTTGACCTCACAGCAAAAA 57.200 36.364 0.00 0.00 0.00 1.94
2964 4447 4.021544 ACAAAAGTTGACCTCACAGCAAAA 60.022 37.500 0.00 0.00 0.00 2.44
2965 4448 3.509575 ACAAAAGTTGACCTCACAGCAAA 59.490 39.130 0.00 0.00 0.00 3.68
2966 4449 3.088532 ACAAAAGTTGACCTCACAGCAA 58.911 40.909 0.00 0.00 0.00 3.91
2967 4450 2.722094 ACAAAAGTTGACCTCACAGCA 58.278 42.857 0.00 0.00 0.00 4.41
2968 4451 3.782889 AACAAAAGTTGACCTCACAGC 57.217 42.857 0.00 0.00 0.00 4.40
2992 4475 9.594478 TGCACTAGTAAATAAATCTCGATGAAA 57.406 29.630 0.00 0.00 0.00 2.69
2993 4476 9.594478 TTGCACTAGTAAATAAATCTCGATGAA 57.406 29.630 0.00 0.00 0.00 2.57
2994 4477 9.594478 TTTGCACTAGTAAATAAATCTCGATGA 57.406 29.630 0.00 0.00 0.00 2.92
2997 4480 9.431887 ACTTTTGCACTAGTAAATAAATCTCGA 57.568 29.630 0.00 0.00 0.00 4.04
3006 4489 9.338622 ACTTGACTTACTTTTGCACTAGTAAAT 57.661 29.630 16.44 9.87 36.66 1.40
3007 4490 8.609176 CACTTGACTTACTTTTGCACTAGTAAA 58.391 33.333 16.44 1.77 36.66 2.01
3008 4491 7.767198 ACACTTGACTTACTTTTGCACTAGTAA 59.233 33.333 15.40 15.40 35.96 2.24
3009 4492 7.270047 ACACTTGACTTACTTTTGCACTAGTA 58.730 34.615 0.00 3.57 0.00 1.82
3010 4493 6.113411 ACACTTGACTTACTTTTGCACTAGT 58.887 36.000 5.34 5.34 0.00 2.57
3011 4494 6.604735 ACACTTGACTTACTTTTGCACTAG 57.395 37.500 0.00 0.00 0.00 2.57
3012 4495 6.995511 AACACTTGACTTACTTTTGCACTA 57.004 33.333 0.00 0.00 0.00 2.74
3013 4496 5.897377 AACACTTGACTTACTTTTGCACT 57.103 34.783 0.00 0.00 0.00 4.40
3014 4497 6.364976 ACAAAACACTTGACTTACTTTTGCAC 59.635 34.615 0.00 0.00 33.72 4.57
3015 4498 6.451393 ACAAAACACTTGACTTACTTTTGCA 58.549 32.000 0.00 0.00 33.72 4.08
3016 4499 6.584563 TGACAAAACACTTGACTTACTTTTGC 59.415 34.615 0.00 0.00 33.72 3.68
3017 4500 8.514136 TTGACAAAACACTTGACTTACTTTTG 57.486 30.769 0.00 0.00 35.61 2.44
3018 4501 9.535878 TTTTGACAAAACACTTGACTTACTTTT 57.464 25.926 9.30 0.00 0.00 2.27
3019 4502 9.705290 ATTTTGACAAAACACTTGACTTACTTT 57.295 25.926 15.36 0.00 32.37 2.66
3022 4505 9.783256 ACTATTTTGACAAAACACTTGACTTAC 57.217 29.630 15.36 0.00 32.37 2.34
3024 4507 9.353999 GAACTATTTTGACAAAACACTTGACTT 57.646 29.630 15.36 0.00 32.37 3.01
3025 4508 8.739972 AGAACTATTTTGACAAAACACTTGACT 58.260 29.630 15.36 7.03 32.37 3.41
3026 4509 8.911247 AGAACTATTTTGACAAAACACTTGAC 57.089 30.769 15.36 5.14 32.37 3.18
3029 4512 9.797556 GGTAAGAACTATTTTGACAAAACACTT 57.202 29.630 15.36 15.89 32.37 3.16
3030 4513 9.185680 AGGTAAGAACTATTTTGACAAAACACT 57.814 29.630 15.36 3.23 32.37 3.55
3100 4583 5.489637 ACTTTGGTTCCTGGGTGTATATACA 59.510 40.000 11.62 11.62 0.00 2.29
3101 4584 5.820947 CACTTTGGTTCCTGGGTGTATATAC 59.179 44.000 5.89 5.89 0.00 1.47
3102 4585 5.489637 ACACTTTGGTTCCTGGGTGTATATA 59.510 40.000 1.53 0.00 36.37 0.86
3103 4586 4.291249 ACACTTTGGTTCCTGGGTGTATAT 59.709 41.667 1.53 0.00 36.37 0.86
3104 4587 3.653836 ACACTTTGGTTCCTGGGTGTATA 59.346 43.478 1.53 0.00 36.37 1.47
3105 4588 2.445525 ACACTTTGGTTCCTGGGTGTAT 59.554 45.455 1.53 0.00 36.37 2.29
3106 4589 1.847737 ACACTTTGGTTCCTGGGTGTA 59.152 47.619 1.53 0.00 36.37 2.90
3107 4590 0.629058 ACACTTTGGTTCCTGGGTGT 59.371 50.000 0.00 0.00 33.82 4.16
3108 4591 2.649531 TACACTTTGGTTCCTGGGTG 57.350 50.000 0.00 0.00 0.00 4.61
3109 4592 3.895704 AATACACTTTGGTTCCTGGGT 57.104 42.857 0.00 0.00 0.00 4.51
3110 4593 3.509967 GGAAATACACTTTGGTTCCTGGG 59.490 47.826 0.00 0.00 0.00 4.45
3111 4594 3.509967 GGGAAATACACTTTGGTTCCTGG 59.490 47.826 0.00 0.00 0.00 4.45
3112 4595 4.148838 TGGGAAATACACTTTGGTTCCTG 58.851 43.478 0.00 0.00 0.00 3.86
3113 4596 4.463050 TGGGAAATACACTTTGGTTCCT 57.537 40.909 0.00 0.00 0.00 3.36
3114 4597 5.016831 AGATGGGAAATACACTTTGGTTCC 58.983 41.667 0.00 0.00 0.00 3.62
3115 4598 7.393515 ACTTAGATGGGAAATACACTTTGGTTC 59.606 37.037 0.00 0.00 0.00 3.62
3116 4599 7.238710 ACTTAGATGGGAAATACACTTTGGTT 58.761 34.615 0.00 0.00 0.00 3.67
3117 4600 6.790319 ACTTAGATGGGAAATACACTTTGGT 58.210 36.000 0.00 0.00 0.00 3.67
3118 4601 6.884295 TGACTTAGATGGGAAATACACTTTGG 59.116 38.462 0.00 0.00 0.00 3.28
3119 4602 7.921786 TGACTTAGATGGGAAATACACTTTG 57.078 36.000 0.00 0.00 0.00 2.77
3121 4604 9.784531 CATATGACTTAGATGGGAAATACACTT 57.215 33.333 0.00 0.00 0.00 3.16
3122 4605 8.938883 ACATATGACTTAGATGGGAAATACACT 58.061 33.333 10.38 0.00 32.26 3.55
3123 4606 9.209175 GACATATGACTTAGATGGGAAATACAC 57.791 37.037 10.38 0.00 32.26 2.90
3124 4607 8.933653 TGACATATGACTTAGATGGGAAATACA 58.066 33.333 10.38 0.00 32.26 2.29
3125 4608 9.950496 ATGACATATGACTTAGATGGGAAATAC 57.050 33.333 10.38 0.00 32.26 1.89
3127 4610 9.293404 CAATGACATATGACTTAGATGGGAAAT 57.707 33.333 10.38 0.00 32.26 2.17
3128 4611 8.493607 TCAATGACATATGACTTAGATGGGAAA 58.506 33.333 10.38 0.00 32.26 3.13
3129 4612 8.033178 TCAATGACATATGACTTAGATGGGAA 57.967 34.615 10.38 0.00 32.26 3.97
3130 4613 7.616528 TCAATGACATATGACTTAGATGGGA 57.383 36.000 10.38 0.00 32.26 4.37
3131 4614 8.319881 AGATCAATGACATATGACTTAGATGGG 58.680 37.037 10.38 0.00 32.26 4.00
3132 4615 9.722184 AAGATCAATGACATATGACTTAGATGG 57.278 33.333 10.38 0.00 32.26 3.51
3137 4620 9.196552 CGCTTAAGATCAATGACATATGACTTA 57.803 33.333 10.38 3.79 0.00 2.24
3138 4621 7.172190 CCGCTTAAGATCAATGACATATGACTT 59.828 37.037 10.38 0.00 0.00 3.01
3139 4622 6.648310 CCGCTTAAGATCAATGACATATGACT 59.352 38.462 10.38 0.00 0.00 3.41
3140 4623 6.646653 TCCGCTTAAGATCAATGACATATGAC 59.353 38.462 10.38 3.62 0.00 3.06
3141 4624 6.758254 TCCGCTTAAGATCAATGACATATGA 58.242 36.000 10.38 0.00 0.00 2.15
3142 4625 6.648310 ACTCCGCTTAAGATCAATGACATATG 59.352 38.462 6.67 0.00 0.00 1.78
3143 4626 6.763355 ACTCCGCTTAAGATCAATGACATAT 58.237 36.000 6.67 0.00 0.00 1.78
3144 4627 6.161855 ACTCCGCTTAAGATCAATGACATA 57.838 37.500 6.67 0.00 0.00 2.29
3145 4628 5.028549 ACTCCGCTTAAGATCAATGACAT 57.971 39.130 6.67 0.00 0.00 3.06
3146 4629 4.471904 ACTCCGCTTAAGATCAATGACA 57.528 40.909 6.67 0.00 0.00 3.58
3147 4630 5.500931 CGAAACTCCGCTTAAGATCAATGAC 60.501 44.000 6.67 0.00 0.00 3.06
3148 4631 4.566759 CGAAACTCCGCTTAAGATCAATGA 59.433 41.667 6.67 0.00 0.00 2.57
3149 4632 4.330074 ACGAAACTCCGCTTAAGATCAATG 59.670 41.667 6.67 0.00 0.00 2.82
3150 4633 4.330074 CACGAAACTCCGCTTAAGATCAAT 59.670 41.667 6.67 0.00 0.00 2.57
3151 4634 3.678072 CACGAAACTCCGCTTAAGATCAA 59.322 43.478 6.67 0.00 0.00 2.57
3152 4635 3.250744 CACGAAACTCCGCTTAAGATCA 58.749 45.455 6.67 0.00 0.00 2.92
3153 4636 3.060895 CACACGAAACTCCGCTTAAGATC 59.939 47.826 6.67 0.00 0.00 2.75
3154 4637 2.993899 CACACGAAACTCCGCTTAAGAT 59.006 45.455 6.67 0.00 0.00 2.40
3155 4638 2.400399 CACACGAAACTCCGCTTAAGA 58.600 47.619 6.67 0.00 0.00 2.10
3156 4639 1.459592 CCACACGAAACTCCGCTTAAG 59.540 52.381 0.00 0.00 0.00 1.85
3157 4640 1.504359 CCACACGAAACTCCGCTTAA 58.496 50.000 0.00 0.00 0.00 1.85
3158 4641 0.320073 CCCACACGAAACTCCGCTTA 60.320 55.000 0.00 0.00 0.00 3.09
3159 4642 1.597027 CCCACACGAAACTCCGCTT 60.597 57.895 0.00 0.00 0.00 4.68
3160 4643 1.466025 TACCCACACGAAACTCCGCT 61.466 55.000 0.00 0.00 0.00 5.52
3161 4644 0.390735 ATACCCACACGAAACTCCGC 60.391 55.000 0.00 0.00 0.00 5.54
3162 4645 2.088950 AATACCCACACGAAACTCCG 57.911 50.000 0.00 0.00 0.00 4.63
3163 4646 4.070009 AGAAAATACCCACACGAAACTCC 58.930 43.478 0.00 0.00 0.00 3.85
3164 4647 5.684550 AAGAAAATACCCACACGAAACTC 57.315 39.130 0.00 0.00 0.00 3.01
3165 4648 5.009310 GGAAAGAAAATACCCACACGAAACT 59.991 40.000 0.00 0.00 0.00 2.66
3166 4649 5.009310 AGGAAAGAAAATACCCACACGAAAC 59.991 40.000 0.00 0.00 0.00 2.78
3167 4650 5.134661 AGGAAAGAAAATACCCACACGAAA 58.865 37.500 0.00 0.00 0.00 3.46
3168 4651 4.721132 AGGAAAGAAAATACCCACACGAA 58.279 39.130 0.00 0.00 0.00 3.85
3169 4652 4.360951 AGGAAAGAAAATACCCACACGA 57.639 40.909 0.00 0.00 0.00 4.35
3170 4653 5.447624 AAAGGAAAGAAAATACCCACACG 57.552 39.130 0.00 0.00 0.00 4.49
3186 4669 9.793259 AGTGACTCAATCAAGTATAAAAAGGAA 57.207 29.630 0.00 0.00 39.72 3.36
3187 4670 9.793259 AAGTGACTCAATCAAGTATAAAAAGGA 57.207 29.630 0.00 0.00 39.72 3.36
3204 4687 9.958180 TGGAGAATCAAATTAATAAGTGACTCA 57.042 29.630 0.00 0.00 36.25 3.41
3206 4689 8.883731 CGTGGAGAATCAAATTAATAAGTGACT 58.116 33.333 0.00 0.00 36.25 3.41
3207 4690 8.665685 ACGTGGAGAATCAAATTAATAAGTGAC 58.334 33.333 0.00 0.00 36.25 3.67
3208 4691 8.664798 CACGTGGAGAATCAAATTAATAAGTGA 58.335 33.333 7.95 0.00 36.25 3.41
3209 4692 8.450964 ACACGTGGAGAATCAAATTAATAAGTG 58.549 33.333 21.57 0.00 36.25 3.16
3210 4693 8.561738 ACACGTGGAGAATCAAATTAATAAGT 57.438 30.769 21.57 0.00 36.25 2.24
3212 4695 9.104965 CCTACACGTGGAGAATCAAATTAATAA 57.895 33.333 29.71 0.00 36.25 1.40
3232 4718 2.851263 TCACCAATCCACACCTACAC 57.149 50.000 0.00 0.00 0.00 2.90
3255 4741 3.057315 ACAAATCGAAAGTGGCCAGATTG 60.057 43.478 5.11 8.77 32.59 2.67
3261 4750 5.449999 CCCTAATTACAAATCGAAAGTGGCC 60.450 44.000 0.00 0.00 0.00 5.36
3338 4830 1.164411 CCATAGTTTGTGCAAGCCGA 58.836 50.000 0.00 0.00 0.00 5.54
3349 4842 9.787435 TTTGATTTGTAGTAGTGTCCATAGTTT 57.213 29.630 0.00 0.00 0.00 2.66
3389 4889 3.446873 GTCAGGTCTCAGTCAGTGATGAT 59.553 47.826 0.00 0.00 33.51 2.45
3401 4901 3.870955 ACGCCTTGTCAGGTCTCA 58.129 55.556 0.00 0.00 43.18 3.27
3410 4910 0.671781 GCTCATCACTGACGCCTTGT 60.672 55.000 0.00 0.00 0.00 3.16
3412 4912 1.078848 GGCTCATCACTGACGCCTT 60.079 57.895 8.06 0.00 40.06 4.35
3444 4944 5.707298 AGACCAGTCAATGTTAACCATCTTG 59.293 40.000 2.48 2.55 31.75 3.02
3450 4950 7.328493 GCATTTTTAGACCAGTCAATGTTAACC 59.672 37.037 2.48 0.00 0.00 2.85
3475 4975 4.338400 GTGGAAGAACACCTTATTATGGGC 59.662 45.833 1.13 0.00 34.68 5.36
3494 4999 1.935400 ATGGCCCAATGGAGGTGGA 60.935 57.895 0.00 0.00 38.54 4.02
3495 5000 1.759299 CATGGCCCAATGGAGGTGG 60.759 63.158 0.00 0.00 35.77 4.61
3497 5002 2.042639 GCATGGCCCAATGGAGGT 60.043 61.111 0.00 0.00 0.00 3.85
3498 5003 3.221389 CGCATGGCCCAATGGAGG 61.221 66.667 0.00 0.00 0.00 4.30
3499 5004 2.989173 ATCCGCATGGCCCAATGGAG 62.989 60.000 0.00 0.00 34.14 3.86
3500 5005 3.072292 ATCCGCATGGCCCAATGGA 62.072 57.895 0.00 2.84 34.14 3.41
3502 5007 1.393487 TTCATCCGCATGGCCCAATG 61.393 55.000 0.00 0.00 34.14 2.82
3503 5008 0.687098 TTTCATCCGCATGGCCCAAT 60.687 50.000 0.00 0.00 34.14 3.16
3504 5009 0.687098 ATTTCATCCGCATGGCCCAA 60.687 50.000 0.00 0.00 34.14 4.12
3505 5010 0.687098 AATTTCATCCGCATGGCCCA 60.687 50.000 0.00 0.00 34.14 5.36
3507 5012 1.935199 CAAAATTTCATCCGCATGGCC 59.065 47.619 0.00 0.00 34.14 5.36
3508 5013 2.604462 GACAAAATTTCATCCGCATGGC 59.396 45.455 0.00 0.00 34.14 4.40
3509 5014 3.613737 GTGACAAAATTTCATCCGCATGG 59.386 43.478 0.00 0.00 0.00 3.66
3510 5015 4.236147 TGTGACAAAATTTCATCCGCATG 58.764 39.130 0.00 0.00 0.00 4.06
3511 5016 4.218200 TCTGTGACAAAATTTCATCCGCAT 59.782 37.500 0.00 0.00 0.00 4.73
3512 5017 3.567585 TCTGTGACAAAATTTCATCCGCA 59.432 39.130 0.00 0.00 0.00 5.69
3513 5018 4.159377 TCTGTGACAAAATTTCATCCGC 57.841 40.909 0.00 0.00 0.00 5.54
3514 5019 5.097529 CCATCTGTGACAAAATTTCATCCG 58.902 41.667 0.00 0.00 0.00 4.18
3515 5020 5.413499 CCCATCTGTGACAAAATTTCATCC 58.587 41.667 0.00 0.00 0.00 3.51
3516 5021 4.866486 GCCCATCTGTGACAAAATTTCATC 59.134 41.667 0.00 0.00 0.00 2.92
3517 5022 4.322953 GGCCCATCTGTGACAAAATTTCAT 60.323 41.667 0.00 0.00 0.00 2.57
3519 5024 3.588955 GGCCCATCTGTGACAAAATTTC 58.411 45.455 0.00 0.00 0.00 2.17
3520 5025 2.029110 CGGCCCATCTGTGACAAAATTT 60.029 45.455 0.00 0.00 0.00 1.82
3521 5026 1.545582 CGGCCCATCTGTGACAAAATT 59.454 47.619 0.00 0.00 0.00 1.82
3522 5027 1.176527 CGGCCCATCTGTGACAAAAT 58.823 50.000 0.00 0.00 0.00 1.82
3523 5028 0.179004 ACGGCCCATCTGTGACAAAA 60.179 50.000 0.00 0.00 31.81 2.44
3526 5031 1.552799 ATGACGGCCCATCTGTGACA 61.553 55.000 0.00 0.00 33.57 3.58
3527 5032 0.464036 TATGACGGCCCATCTGTGAC 59.536 55.000 0.00 0.00 33.57 3.67
3529 5034 2.260844 AATATGACGGCCCATCTGTG 57.739 50.000 0.00 0.00 33.57 3.66
3530 5035 2.575532 CAAATATGACGGCCCATCTGT 58.424 47.619 0.00 0.00 36.89 3.41
3531 5036 1.881973 CCAAATATGACGGCCCATCTG 59.118 52.381 0.00 0.00 0.00 2.90
3532 5037 1.819305 GCCAAATATGACGGCCCATCT 60.819 52.381 0.00 0.00 40.07 2.90
3533 5038 0.598065 GCCAAATATGACGGCCCATC 59.402 55.000 0.00 0.00 40.07 3.51
3534 5039 2.732289 GCCAAATATGACGGCCCAT 58.268 52.632 0.00 0.00 40.07 4.00
3538 5043 1.782028 GACCGGCCAAATATGACGGC 61.782 60.000 0.00 3.97 45.09 5.68
3540 5045 2.519377 TAGACCGGCCAAATATGACG 57.481 50.000 0.00 0.00 0.00 4.35
3541 5046 4.002906 TCATAGACCGGCCAAATATGAC 57.997 45.455 0.00 0.00 30.08 3.06
3542 5047 4.908601 ATCATAGACCGGCCAAATATGA 57.091 40.909 15.38 15.38 37.29 2.15
3544 5049 5.338381 CCACTATCATAGACCGGCCAAATAT 60.338 44.000 0.00 0.00 0.00 1.28
3548 5053 1.691976 CCACTATCATAGACCGGCCAA 59.308 52.381 0.00 0.00 0.00 4.52
3549 5054 1.338107 CCACTATCATAGACCGGCCA 58.662 55.000 0.00 0.00 0.00 5.36
3550 5055 1.272769 GACCACTATCATAGACCGGCC 59.727 57.143 0.00 0.00 0.00 6.13
3551 5056 1.272769 GGACCACTATCATAGACCGGC 59.727 57.143 0.00 0.00 0.00 6.13
3554 5059 4.835615 AGTGATGGACCACTATCATAGACC 59.164 45.833 0.00 0.00 44.82 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.