Multiple sequence alignment - TraesCS7D01G403600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G403600 chr7D 100.000 5922 0 0 1 5922 520515473 520521394 0.000000e+00 10936.0
1 TraesCS7D01G403600 chr7D 82.727 110 13 3 104 212 92720160 92720056 6.320000e-15 93.5
2 TraesCS7D01G403600 chr7B 94.160 2209 78 21 631 2833 553649282 553651445 0.000000e+00 3317.0
3 TraesCS7D01G403600 chr7B 92.653 2341 115 23 2830 5125 553651484 553653812 0.000000e+00 3317.0
4 TraesCS7D01G403600 chr7B 90.370 270 17 6 1 268 553647974 553648236 4.390000e-91 346.0
5 TraesCS7D01G403600 chr7B 86.614 254 31 2 269 520 553648337 553648589 1.630000e-70 278.0
6 TraesCS7D01G403600 chr7B 93.750 112 6 1 5119 5229 553653930 553654041 3.670000e-37 167.0
7 TraesCS7D01G403600 chr7A 92.518 1644 90 12 1005 2635 596741269 596742892 0.000000e+00 2324.0
8 TraesCS7D01G403600 chr7A 84.446 1228 144 34 3403 4609 596743698 596744899 0.000000e+00 1166.0
9 TraesCS7D01G403600 chr7A 92.587 634 34 3 4609 5229 596744937 596745570 0.000000e+00 898.0
10 TraesCS7D01G403600 chr7A 95.259 464 15 4 5276 5733 596745569 596746031 0.000000e+00 728.0
11 TraesCS7D01G403600 chr7A 86.803 538 49 7 2877 3395 596743303 596743837 1.110000e-161 580.0
12 TraesCS7D01G403600 chr7A 96.266 241 6 2 683 922 596740658 596740896 5.560000e-105 392.0
13 TraesCS7D01G403600 chr7A 86.813 273 23 10 1 268 596739289 596739553 5.800000e-75 292.0
14 TraesCS7D01G403600 chr7A 90.909 187 17 0 2647 2833 596743031 596743217 9.850000e-63 252.0
15 TraesCS7D01G403600 chr4A 81.988 161 25 4 5765 5922 678293538 678293379 3.720000e-27 134.0
16 TraesCS7D01G403600 chr4A 96.000 50 2 0 36 85 111071896 111071847 1.370000e-11 82.4
17 TraesCS7D01G403600 chr3D 81.765 170 16 9 100 268 123319387 123319542 1.730000e-25 128.0
18 TraesCS7D01G403600 chr3B 79.630 162 27 6 5766 5922 739487680 739487520 1.740000e-20 111.0
19 TraesCS7D01G403600 chr5B 91.026 78 7 0 99 176 283203060 283203137 8.120000e-19 106.0
20 TraesCS7D01G403600 chr5A 78.824 170 24 8 99 267 333439522 333439680 2.920000e-18 104.0
21 TraesCS7D01G403600 chr4B 82.031 128 17 5 99 225 416255954 416256076 2.920000e-18 104.0
22 TraesCS7D01G403600 chr4B 94.000 50 2 1 33 82 437338041 437338089 2.290000e-09 75.0
23 TraesCS7D01G403600 chr6D 92.647 68 5 0 99 166 41175194 41175127 1.360000e-16 99.0
24 TraesCS7D01G403600 chr6D 81.250 128 18 4 99 225 420160731 420160853 1.360000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G403600 chr7D 520515473 520521394 5921 False 10936 10936 100.000000 1 5922 1 chr7D.!!$F1 5921
1 TraesCS7D01G403600 chr7B 553647974 553654041 6067 False 1485 3317 91.509400 1 5229 5 chr7B.!!$F1 5228
2 TraesCS7D01G403600 chr7A 596739289 596746031 6742 False 829 2324 90.700125 1 5733 8 chr7A.!!$F1 5732

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
395 500 0.317436 TTCAAATGTTGTCGTGCCGC 60.317 50.0 0.00 0.00 0.00 6.53 F
540 647 0.775861 GTTTGCATTGCCGACGAAAC 59.224 50.0 6.12 6.03 0.00 2.78 F
1353 3048 0.524862 CTTGGTGATCTGCTTGTGCC 59.475 55.0 0.00 0.00 38.71 5.01 F
2070 3766 1.113788 ACATCGCCCCCAAATCATTG 58.886 50.0 0.00 0.00 36.25 2.82 F
3425 5332 2.285084 GCGCTAGTAATCAGTTTCGTGC 60.285 50.0 0.00 0.00 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1353 3048 0.822164 ACTATCGAACCGGACCAAGG 59.178 55.0 9.46 0.00 0.00 3.61 R
1374 3069 1.399744 TAGCTCCGCCCCACACATAG 61.400 60.0 0.00 0.00 0.00 2.23 R
2872 4751 0.460311 ATTCTACCTCAACCTCCGCG 59.540 55.0 0.00 0.00 0.00 6.46 R
3574 5482 0.107945 GGAGCAGGAGCCTGTAACTG 60.108 60.0 17.23 0.00 45.24 3.16 R
5203 7314 0.104120 TCACGGCCGATATCAACCAG 59.896 55.0 35.90 7.77 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
167 170 9.508294 CTTTATGTAAAGGCTAGCGTTCTGCTG 62.508 44.444 21.95 5.75 45.08 4.41
212 215 3.615496 GGTCGATGTTTACGTGCTTGTAT 59.385 43.478 0.00 0.00 0.00 2.29
369 474 0.863144 GTACGTGTCACCGTTGCATT 59.137 50.000 0.00 0.00 42.00 3.56
380 485 1.604947 CCGTTGCATTGCACCATTCAA 60.605 47.619 11.66 0.00 38.71 2.69
385 490 3.741249 TGCATTGCACCATTCAAATGTT 58.259 36.364 7.38 0.00 31.86 2.71
389 494 3.010624 TGCACCATTCAAATGTTGTCG 57.989 42.857 2.80 0.00 32.15 4.35
395 500 0.317436 TTCAAATGTTGTCGTGCCGC 60.317 50.000 0.00 0.00 0.00 6.53
396 501 2.074353 CAAATGTTGTCGTGCCGCG 61.074 57.895 0.00 0.00 43.01 6.46
399 504 2.438385 AATGTTGTCGTGCCGCGTTC 62.438 55.000 4.92 0.00 42.13 3.95
405 512 2.089936 TCGTGCCGCGTTCATACAC 61.090 57.895 4.92 2.56 42.13 2.90
425 532 6.959639 ACACTAACTGGACATGTCAAATTT 57.040 33.333 26.47 15.91 0.00 1.82
449 556 2.334971 TTCATTGCAATGCACGAGTG 57.665 45.000 30.57 10.09 38.71 3.51
453 560 3.251972 TCATTGCAATGCACGAGTGTTTA 59.748 39.130 30.57 9.43 38.71 2.01
499 606 1.679680 TGTATGAATCCCGTCGTCTCC 59.320 52.381 0.00 0.00 0.00 3.71
511 618 5.947566 TCCCGTCGTCTCCATATGAATTATA 59.052 40.000 3.65 0.00 0.00 0.98
514 621 7.764443 CCCGTCGTCTCCATATGAATTATATTT 59.236 37.037 3.65 0.00 29.37 1.40
532 639 6.913873 ATATTTGAATCTGTTTGCATTGCC 57.086 33.333 6.12 0.00 0.00 4.52
540 647 0.775861 GTTTGCATTGCCGACGAAAC 59.224 50.000 6.12 6.03 0.00 2.78
547 654 3.850374 GCATTGCCGACGAAACTTTACAA 60.850 43.478 0.00 0.00 0.00 2.41
562 669 5.982324 ACTTTACAAATTCGAAAGACCGAC 58.018 37.500 0.00 0.00 41.84 4.79
563 670 4.634349 TTACAAATTCGAAAGACCGACG 57.366 40.909 0.00 0.00 41.84 5.12
564 671 2.476821 ACAAATTCGAAAGACCGACGT 58.523 42.857 0.00 0.00 41.84 4.34
568 675 3.770263 ATTCGAAAGACCGACGTATCA 57.230 42.857 0.00 0.00 41.84 2.15
570 677 1.805943 TCGAAAGACCGACGTATCACA 59.194 47.619 0.00 0.00 33.14 3.58
622 1406 3.570912 ATAGTATGTCCGTTTTGGGGG 57.429 47.619 0.00 0.00 38.76 5.40
644 2036 3.552875 CATGTTGGAGATGGCTCTGAAT 58.447 45.455 0.00 0.00 41.06 2.57
651 2043 3.135530 GGAGATGGCTCTGAATACAGGTT 59.864 47.826 0.00 0.00 43.60 3.50
658 2050 3.428999 GCTCTGAATACAGGTTCGCACTA 60.429 47.826 0.00 0.00 43.60 2.74
659 2051 4.744570 CTCTGAATACAGGTTCGCACTAA 58.255 43.478 0.00 0.00 43.60 2.24
670 2063 4.171416 GCACTAAGCCGCAGCAGC 62.171 66.667 0.00 0.00 43.56 5.25
706 2111 5.798125 ATAGTATCACTCTGACATGTGGG 57.202 43.478 1.15 0.00 35.15 4.61
843 2248 4.700365 TCGTCACGTGCAGCTCCG 62.700 66.667 11.67 6.01 0.00 4.63
890 2295 1.468340 GACCAACAAAACGTGCGTGC 61.468 55.000 0.00 0.00 0.00 5.34
894 2299 3.085010 CAAAACGTGCGTGCGCTC 61.085 61.111 17.49 12.78 42.51 5.03
895 2300 4.307908 AAAACGTGCGTGCGCTCC 62.308 61.111 17.49 7.33 42.51 4.70
943 2348 1.766143 GCATCCGCATCGTGTTCTCC 61.766 60.000 0.00 0.00 38.36 3.71
950 2355 1.079819 ATCGTGTTCTCCGTGCCAG 60.080 57.895 0.00 0.00 0.00 4.85
1353 3048 0.524862 CTTGGTGATCTGCTTGTGCC 59.475 55.000 0.00 0.00 38.71 5.01
1363 3058 2.672996 CTTGTGCCCTTGGTCCGG 60.673 66.667 0.00 0.00 0.00 5.14
1373 3068 2.026641 CCTTGGTCCGGTTCGATAGTA 58.973 52.381 0.00 0.00 37.40 1.82
1374 3069 2.223665 CCTTGGTCCGGTTCGATAGTAC 60.224 54.545 0.00 0.00 35.43 2.73
1376 3071 3.558931 TGGTCCGGTTCGATAGTACTA 57.441 47.619 4.77 4.77 36.54 1.82
1377 3072 4.090761 TGGTCCGGTTCGATAGTACTAT 57.909 45.455 15.37 15.37 36.54 2.12
1378 3073 3.817084 TGGTCCGGTTCGATAGTACTATG 59.183 47.826 20.13 11.95 36.54 2.23
1510 3205 2.300437 GTTCCACTGAGTAGACCTTGCT 59.700 50.000 0.00 0.00 0.00 3.91
1570 3265 9.004717 TGTCATTTATTTCGGAGAATTTGTGTA 57.995 29.630 0.00 0.00 45.90 2.90
1591 3286 6.147821 GTGTATCTCAACATGTTTAGCACTGT 59.852 38.462 8.77 0.00 0.00 3.55
1676 3372 9.931210 GTACATAAGCATAATGAAGTGGTTTAC 57.069 33.333 0.00 0.00 37.29 2.01
1750 3446 7.713073 GTGGGGTTTCTCATAATTTTTCAAACA 59.287 33.333 0.00 0.00 0.00 2.83
1848 3544 9.902684 AAAGTCTCAGTCATTGATGATTATTCT 57.097 29.630 0.00 0.00 39.30 2.40
2069 3765 1.756538 GAACATCGCCCCCAAATCATT 59.243 47.619 0.00 0.00 0.00 2.57
2070 3766 1.113788 ACATCGCCCCCAAATCATTG 58.886 50.000 0.00 0.00 36.25 2.82
2206 3902 4.762251 AGAGCAACCAAGAAACAGGTATTC 59.238 41.667 0.00 0.00 37.07 1.75
2207 3903 4.729868 AGCAACCAAGAAACAGGTATTCT 58.270 39.130 0.00 0.00 37.07 2.40
2212 3908 7.464358 CAACCAAGAAACAGGTATTCTTATCG 58.536 38.462 1.58 0.00 43.41 2.92
2259 3955 7.700322 ACACATGATAACGCTACTCAATAAG 57.300 36.000 0.00 0.00 0.00 1.73
2264 3960 3.454371 AACGCTACTCAATAAGCCGAT 57.546 42.857 0.00 0.00 35.22 4.18
2425 4133 6.465439 TCATAGGGTGAGTACAAGTATGTG 57.535 41.667 0.00 0.00 35.26 3.21
2445 4154 3.437049 GTGCTGTATTGGACCTCAAGAAC 59.563 47.826 0.00 0.00 38.95 3.01
2459 4168 5.360999 ACCTCAAGAACTTTCTTTCCCTTTG 59.639 40.000 1.28 0.00 44.70 2.77
2509 4218 8.291740 TGATATTTTGTCTTGACATTGTGTGAG 58.708 33.333 4.18 0.00 0.00 3.51
2564 4273 2.773993 CCCTTTTAGGCAGACGGTTA 57.226 50.000 0.00 0.00 32.73 2.85
2642 4351 5.334260 CCAAATATGCAAAGCAGGTGTTTTG 60.334 40.000 13.26 13.26 43.65 2.44
2655 4491 8.752005 AGCAGGTGTTTTGTTATACATCATAT 57.248 30.769 0.00 0.00 0.00 1.78
2767 4603 7.824289 TCTTTTGTCTGCAACAATATAGCTAGT 59.176 33.333 12.95 0.00 46.94 2.57
2770 4606 8.420374 TTGTCTGCAACAATATAGCTAGTTAC 57.580 34.615 0.00 0.00 42.95 2.50
2841 4720 4.458295 AGCTTGGCTATTGCACATATGATC 59.542 41.667 10.38 0.86 41.91 2.92
2851 4730 7.709269 ATTGCACATATGATCAATCTTTTGC 57.291 32.000 10.38 5.24 32.61 3.68
2872 4751 4.568359 TGCGTTCTTTAGAGATTCATCAGC 59.432 41.667 0.00 0.00 0.00 4.26
2874 4753 4.317698 CGTTCTTTAGAGATTCATCAGCGC 60.318 45.833 0.00 0.00 0.00 5.92
2902 4781 7.363031 AGGTTGAGGTAGAATGTATAGAAGGA 58.637 38.462 0.00 0.00 0.00 3.36
2967 4874 7.230108 CCAAAAGATCATTGGTGCACTATATCT 59.770 37.037 17.98 15.40 41.95 1.98
3126 5033 4.233789 CTCTCGTAAATCAGGCTATCAGC 58.766 47.826 0.00 0.00 41.46 4.26
3161 5068 4.348168 AGATACTTCCACTTGGAGTGTTGT 59.652 41.667 10.10 5.56 44.50 3.32
3284 5191 5.791974 CGAGTAATCAGTTTCTTGCATTGTG 59.208 40.000 0.00 0.00 0.00 3.33
3371 5278 4.301628 CTTCTTTGTTGGGCAGAATGTTC 58.698 43.478 0.00 0.00 39.31 3.18
3408 5315 4.839668 ATTAAGAGAGTCGAATAGCGCT 57.160 40.909 17.26 17.26 40.61 5.92
3425 5332 2.285084 GCGCTAGTAATCAGTTTCGTGC 60.285 50.000 0.00 0.00 0.00 5.34
3439 5346 5.225743 CAGTTTCGTGCATTGTGAAATATCG 59.774 40.000 8.82 0.00 34.47 2.92
3471 5378 9.307121 CTGTCCAGTAGAGTTTATTTCTATGTG 57.693 37.037 0.00 0.00 30.45 3.21
3472 5379 7.764443 TGTCCAGTAGAGTTTATTTCTATGTGC 59.236 37.037 0.00 0.00 30.45 4.57
3525 5433 5.007626 TCGTTGGCAGAATGTTAATATGCTC 59.992 40.000 0.00 0.00 39.31 4.26
3546 5454 5.234543 GCTCGTTCTAAATTAAGAGCGGAAT 59.765 40.000 9.64 0.00 46.37 3.01
3627 5535 0.460987 CCTTTAGCGCCTCTGTCCAG 60.461 60.000 2.29 0.00 0.00 3.86
3636 5544 2.611292 CGCCTCTGTCCAGAATTTGATC 59.389 50.000 0.00 0.00 36.94 2.92
3670 5578 8.158169 TGTTACATTTGATAGGAGCATCATTC 57.842 34.615 0.00 0.00 34.95 2.67
3756 5667 8.883731 TCTGCAGTTATAATCTTCTTAACTTGC 58.116 33.333 14.67 0.00 34.73 4.01
3846 5758 5.709631 GGCATTTATCAATGTTTGGGGTTTT 59.290 36.000 1.77 0.00 41.84 2.43
3871 5794 6.593382 TGACACCAATTTTGTGAAAAAGAAGG 59.407 34.615 10.96 0.00 33.47 3.46
3958 5883 5.356470 GGAAGGTGAGGAATCATTGAAGAAG 59.644 44.000 0.00 0.00 0.00 2.85
4074 5999 4.310288 GCCCTCTGCAGAAAGGTC 57.690 61.111 25.73 17.39 40.77 3.85
4121 6046 6.095300 CACATCAGATTTTATAACTGTGCCCA 59.905 38.462 0.00 0.00 33.93 5.36
4144 6069 7.246311 CCACTCATGAGTTTTTAGCTTGTATG 58.754 38.462 25.84 9.16 40.20 2.39
4148 6073 6.654582 TCATGAGTTTTTAGCTTGTATGCTGA 59.345 34.615 0.00 0.00 43.87 4.26
4155 6080 9.573133 GTTTTTAGCTTGTATGCTGAATATTGT 57.427 29.630 0.00 0.00 43.87 2.71
4156 6081 9.787532 TTTTTAGCTTGTATGCTGAATATTGTC 57.212 29.630 0.00 0.00 43.87 3.18
4157 6082 8.737168 TTTAGCTTGTATGCTGAATATTGTCT 57.263 30.769 0.00 0.00 43.87 3.41
4335 6264 8.882736 GGATTTCTTTGTTTGAACATTTTGACT 58.117 29.630 0.00 0.00 38.95 3.41
4438 6371 5.389859 TTTTCCATGTGATTTCGAGCATT 57.610 34.783 0.00 0.00 0.00 3.56
4489 6424 5.024785 AGTGCTTGGTTTAGAGTATAGCC 57.975 43.478 0.00 0.00 0.00 3.93
4503 6439 3.439129 AGTATAGCCCTTCGTTTTGTTGC 59.561 43.478 0.00 0.00 0.00 4.17
4670 6656 3.772025 ACACTATTTACCTCTGAGCTGCT 59.228 43.478 0.00 0.00 0.00 4.24
4726 6712 4.119862 TGCTTATGGTTCTAATGCTCGAC 58.880 43.478 0.00 0.00 0.00 4.20
4746 6733 6.168389 TCGACCCCTTTTCTCTGTTATAAAC 58.832 40.000 0.00 0.00 0.00 2.01
4774 6761 1.282157 CAAAAGGATCCTCTTCGGGGT 59.718 52.381 16.52 0.00 0.00 4.95
4804 6791 5.469421 GGATAAGATGCTGGAAGAGATTGTG 59.531 44.000 0.00 0.00 34.07 3.33
4816 6803 2.159043 AGAGATTGTGGCCGTGATACAG 60.159 50.000 0.00 0.00 0.00 2.74
4825 6812 1.852895 GCCGTGATACAGAATGACGAC 59.147 52.381 0.00 0.00 46.65 4.34
4832 6819 1.450312 CAGAATGACGACCCAGGGC 60.450 63.158 4.91 0.00 39.69 5.19
4833 6820 1.613630 AGAATGACGACCCAGGGCT 60.614 57.895 4.91 0.00 0.00 5.19
4939 6926 6.367374 TTCTGAACATGGTGGTGATTACTA 57.633 37.500 0.00 0.00 0.00 1.82
4947 6934 4.021229 TGGTGGTGATTACTAGACACGAT 58.979 43.478 0.00 0.00 35.68 3.73
4978 6965 5.390567 CGAGGCAATTTACTGTAAGAACCAC 60.391 44.000 0.00 0.82 37.43 4.16
4981 6968 5.335661 GGCAATTTACTGTAAGAACCACAGG 60.336 44.000 7.35 0.00 46.25 4.00
4982 6969 5.472137 GCAATTTACTGTAAGAACCACAGGA 59.528 40.000 7.35 0.00 46.25 3.86
4983 6970 6.348540 GCAATTTACTGTAAGAACCACAGGAG 60.349 42.308 7.35 0.00 46.25 3.69
5005 6992 8.053963 AGGAGTACTAGTTAGCTACAGAATTCA 58.946 37.037 8.44 0.00 0.00 2.57
5169 7280 0.108615 TTAGCTCTTGAGCCTCGCAC 60.109 55.000 17.78 0.00 34.90 5.34
5218 7329 0.603975 GCCTCTGGTTGATATCGGCC 60.604 60.000 0.00 0.00 0.00 6.13
5229 7340 2.223876 TGATATCGGCCGTGAAACCTAC 60.224 50.000 27.15 8.63 0.00 3.18
5230 7341 1.477553 TATCGGCCGTGAAACCTACT 58.522 50.000 27.15 0.84 0.00 2.57
5231 7342 0.175073 ATCGGCCGTGAAACCTACTC 59.825 55.000 27.15 0.00 0.00 2.59
5232 7343 1.447314 CGGCCGTGAAACCTACTCC 60.447 63.158 19.50 0.00 0.00 3.85
5233 7344 1.078637 GGCCGTGAAACCTACTCCC 60.079 63.158 0.00 0.00 0.00 4.30
5234 7345 1.551019 GGCCGTGAAACCTACTCCCT 61.551 60.000 0.00 0.00 0.00 4.20
5235 7346 0.108281 GCCGTGAAACCTACTCCCTC 60.108 60.000 0.00 0.00 0.00 4.30
5236 7347 1.558233 CCGTGAAACCTACTCCCTCT 58.442 55.000 0.00 0.00 0.00 3.69
5237 7348 1.204941 CCGTGAAACCTACTCCCTCTG 59.795 57.143 0.00 0.00 0.00 3.35
5238 7349 1.893801 CGTGAAACCTACTCCCTCTGT 59.106 52.381 0.00 0.00 0.00 3.41
5239 7350 3.087031 CGTGAAACCTACTCCCTCTGTA 58.913 50.000 0.00 0.00 0.00 2.74
5240 7351 3.508793 CGTGAAACCTACTCCCTCTGTAA 59.491 47.826 0.00 0.00 0.00 2.41
5241 7352 4.159879 CGTGAAACCTACTCCCTCTGTAAT 59.840 45.833 0.00 0.00 0.00 1.89
5242 7353 5.420409 GTGAAACCTACTCCCTCTGTAATG 58.580 45.833 0.00 0.00 0.00 1.90
5243 7354 5.187186 GTGAAACCTACTCCCTCTGTAATGA 59.813 44.000 0.00 0.00 0.00 2.57
5244 7355 5.783360 TGAAACCTACTCCCTCTGTAATGAA 59.217 40.000 0.00 0.00 0.00 2.57
5245 7356 6.271391 TGAAACCTACTCCCTCTGTAATGAAA 59.729 38.462 0.00 0.00 0.00 2.69
5246 7357 6.893020 AACCTACTCCCTCTGTAATGAAAT 57.107 37.500 0.00 0.00 0.00 2.17
5247 7358 7.989947 AACCTACTCCCTCTGTAATGAAATA 57.010 36.000 0.00 0.00 0.00 1.40
5248 7359 7.362802 ACCTACTCCCTCTGTAATGAAATAC 57.637 40.000 0.00 0.00 0.00 1.89
5249 7360 7.133483 ACCTACTCCCTCTGTAATGAAATACT 58.867 38.462 0.00 0.00 0.00 2.12
5250 7361 7.624077 ACCTACTCCCTCTGTAATGAAATACTT 59.376 37.037 0.00 0.00 0.00 2.24
5251 7362 7.928706 CCTACTCCCTCTGTAATGAAATACTTG 59.071 40.741 0.00 0.00 0.00 3.16
5252 7363 7.259088 ACTCCCTCTGTAATGAAATACTTGT 57.741 36.000 0.00 0.00 0.00 3.16
5253 7364 7.690256 ACTCCCTCTGTAATGAAATACTTGTT 58.310 34.615 0.00 0.00 0.00 2.83
5254 7365 7.607991 ACTCCCTCTGTAATGAAATACTTGTTG 59.392 37.037 0.00 0.00 0.00 3.33
5255 7366 7.458397 TCCCTCTGTAATGAAATACTTGTTGT 58.542 34.615 0.00 0.00 0.00 3.32
5256 7367 7.942341 TCCCTCTGTAATGAAATACTTGTTGTT 59.058 33.333 0.00 0.00 0.00 2.83
5257 7368 8.023128 CCCTCTGTAATGAAATACTTGTTGTTG 58.977 37.037 0.00 0.00 0.00 3.33
5258 7369 8.023128 CCTCTGTAATGAAATACTTGTTGTTGG 58.977 37.037 0.00 0.00 0.00 3.77
5259 7370 7.881142 TCTGTAATGAAATACTTGTTGTTGGG 58.119 34.615 0.00 0.00 0.00 4.12
5260 7371 6.987386 TGTAATGAAATACTTGTTGTTGGGG 58.013 36.000 0.00 0.00 0.00 4.96
5261 7372 5.482163 AATGAAATACTTGTTGTTGGGGG 57.518 39.130 0.00 0.00 0.00 5.40
5262 7373 4.186077 TGAAATACTTGTTGTTGGGGGA 57.814 40.909 0.00 0.00 0.00 4.81
5263 7374 4.547671 TGAAATACTTGTTGTTGGGGGAA 58.452 39.130 0.00 0.00 0.00 3.97
5264 7375 4.962995 TGAAATACTTGTTGTTGGGGGAAA 59.037 37.500 0.00 0.00 0.00 3.13
5265 7376 4.948341 AATACTTGTTGTTGGGGGAAAC 57.052 40.909 0.00 0.00 0.00 2.78
5266 7377 2.543037 ACTTGTTGTTGGGGGAAACT 57.457 45.000 0.00 0.00 0.00 2.66
5267 7378 2.827755 ACTTGTTGTTGGGGGAAACTT 58.172 42.857 0.00 0.00 0.00 2.66
5268 7379 2.499693 ACTTGTTGTTGGGGGAAACTTG 59.500 45.455 0.00 0.00 0.00 3.16
5269 7380 2.534042 TGTTGTTGGGGGAAACTTGA 57.466 45.000 0.00 0.00 0.00 3.02
5270 7381 2.383855 TGTTGTTGGGGGAAACTTGAG 58.616 47.619 0.00 0.00 0.00 3.02
5271 7382 1.686587 GTTGTTGGGGGAAACTTGAGG 59.313 52.381 0.00 0.00 0.00 3.86
5272 7383 0.187361 TGTTGGGGGAAACTTGAGGG 59.813 55.000 0.00 0.00 0.00 4.30
5273 7384 0.481128 GTTGGGGGAAACTTGAGGGA 59.519 55.000 0.00 0.00 0.00 4.20
5274 7385 1.133294 GTTGGGGGAAACTTGAGGGAA 60.133 52.381 0.00 0.00 0.00 3.97
5275 7386 1.466858 TGGGGGAAACTTGAGGGAAT 58.533 50.000 0.00 0.00 0.00 3.01
5276 7387 2.650013 TGGGGGAAACTTGAGGGAATA 58.350 47.619 0.00 0.00 0.00 1.75
5280 7391 4.228895 GGGGGAAACTTGAGGGAATAGTTA 59.771 45.833 0.00 0.00 32.17 2.24
5455 7570 1.190323 GAAACTCAGCACGAACGTCTG 59.810 52.381 15.12 15.12 0.00 3.51
5470 7585 0.102300 GTCTGCTGGCCGTTGTTTTT 59.898 50.000 0.00 0.00 0.00 1.94
5509 7624 3.911989 CGAAAGCAGCCATGTCATC 57.088 52.632 0.00 0.00 0.00 2.92
5523 7638 1.999735 TGTCATCGCTCAAATCCGTTC 59.000 47.619 0.00 0.00 0.00 3.95
5573 7689 1.271597 CCCACTTCTCTGTTCCCCTTG 60.272 57.143 0.00 0.00 0.00 3.61
5666 7782 6.924111 TCTCCCAAAGACATTGCTTTTATTC 58.076 36.000 4.12 0.00 36.01 1.75
5687 7803 2.744202 CGTGGGAGATCAGACCTTTTTG 59.256 50.000 0.00 0.00 0.00 2.44
5695 7811 7.308649 GGGAGATCAGACCTTTTTGTAAGTTTC 60.309 40.741 0.00 0.00 0.00 2.78
5747 7863 8.982091 TTAATTATTTTCCCATCGATGGTACA 57.018 30.769 36.09 20.71 46.65 2.90
5772 7888 4.402528 CCCCCGCCGACACAATCA 62.403 66.667 0.00 0.00 0.00 2.57
5773 7889 3.124921 CCCCGCCGACACAATCAC 61.125 66.667 0.00 0.00 0.00 3.06
5774 7890 2.358125 CCCGCCGACACAATCACA 60.358 61.111 0.00 0.00 0.00 3.58
5775 7891 1.963855 CCCGCCGACACAATCACAA 60.964 57.895 0.00 0.00 0.00 3.33
5776 7892 1.206578 CCGCCGACACAATCACAAC 59.793 57.895 0.00 0.00 0.00 3.32
5777 7893 1.502990 CCGCCGACACAATCACAACA 61.503 55.000 0.00 0.00 0.00 3.33
5778 7894 0.306228 CGCCGACACAATCACAACAA 59.694 50.000 0.00 0.00 0.00 2.83
5779 7895 1.660052 CGCCGACACAATCACAACAAG 60.660 52.381 0.00 0.00 0.00 3.16
5780 7896 1.333619 GCCGACACAATCACAACAAGT 59.666 47.619 0.00 0.00 0.00 3.16
5781 7897 2.223479 GCCGACACAATCACAACAAGTT 60.223 45.455 0.00 0.00 0.00 2.66
5782 7898 3.733684 GCCGACACAATCACAACAAGTTT 60.734 43.478 0.00 0.00 0.00 2.66
5783 7899 3.790820 CCGACACAATCACAACAAGTTTG 59.209 43.478 0.00 0.00 0.00 2.93
5784 7900 4.438065 CCGACACAATCACAACAAGTTTGA 60.438 41.667 0.00 0.00 0.00 2.69
5785 7901 5.092105 CGACACAATCACAACAAGTTTGAA 58.908 37.500 0.00 0.00 0.00 2.69
5786 7902 5.743398 CGACACAATCACAACAAGTTTGAAT 59.257 36.000 0.00 0.00 0.00 2.57
5787 7903 6.291217 CGACACAATCACAACAAGTTTGAATG 60.291 38.462 0.00 9.53 0.00 2.67
5788 7904 6.397272 ACACAATCACAACAAGTTTGAATGT 58.603 32.000 0.00 10.34 34.42 2.71
5789 7905 6.873076 ACACAATCACAACAAGTTTGAATGTT 59.127 30.769 12.10 0.00 40.24 2.71
5795 7911 5.738118 CAACAAGTTTGAATGTTGCCAAT 57.262 34.783 5.79 0.00 46.72 3.16
5796 7912 5.740406 CAACAAGTTTGAATGTTGCCAATC 58.260 37.500 5.79 0.00 46.72 2.67
5797 7913 4.050553 ACAAGTTTGAATGTTGCCAATCG 58.949 39.130 0.00 0.00 0.00 3.34
5798 7914 4.050553 CAAGTTTGAATGTTGCCAATCGT 58.949 39.130 0.00 0.00 0.00 3.73
5799 7915 5.218885 CAAGTTTGAATGTTGCCAATCGTA 58.781 37.500 0.00 0.00 0.00 3.43
5800 7916 5.446143 AGTTTGAATGTTGCCAATCGTAA 57.554 34.783 0.00 0.00 0.00 3.18
5801 7917 5.460646 AGTTTGAATGTTGCCAATCGTAAG 58.539 37.500 0.00 0.00 0.00 2.34
5802 7918 4.433186 TTGAATGTTGCCAATCGTAAGG 57.567 40.909 0.00 0.00 38.47 2.69
5807 7923 4.515404 GCCAATCGTAAGGCGTCT 57.485 55.556 0.00 0.00 41.70 4.18
5808 7924 2.763651 GCCAATCGTAAGGCGTCTT 58.236 52.632 7.72 7.72 41.70 3.01
5809 7925 0.651031 GCCAATCGTAAGGCGTCTTC 59.349 55.000 5.04 0.00 41.70 2.87
5810 7926 1.287425 CCAATCGTAAGGCGTCTTCC 58.713 55.000 5.04 0.00 42.13 3.46
5811 7927 1.134788 CCAATCGTAAGGCGTCTTCCT 60.135 52.381 5.04 0.00 42.13 3.36
5813 7929 2.295253 ATCGTAAGGCGTCTTCCTTG 57.705 50.000 5.04 0.00 45.51 3.61
5814 7930 0.245539 TCGTAAGGCGTCTTCCTTGG 59.754 55.000 5.04 0.00 45.51 3.61
5815 7931 1.359459 CGTAAGGCGTCTTCCTTGGC 61.359 60.000 5.04 0.00 45.51 4.52
5816 7932 0.321298 GTAAGGCGTCTTCCTTGGCA 60.321 55.000 5.04 0.00 45.51 4.92
5817 7933 0.618458 TAAGGCGTCTTCCTTGGCAT 59.382 50.000 5.04 0.00 45.51 4.40
5818 7934 0.618458 AAGGCGTCTTCCTTGGCATA 59.382 50.000 0.00 0.00 44.36 3.14
5819 7935 0.618458 AGGCGTCTTCCTTGGCATAA 59.382 50.000 0.00 0.00 30.82 1.90
5820 7936 1.017387 GGCGTCTTCCTTGGCATAAG 58.983 55.000 0.00 0.00 0.00 1.73
5821 7937 1.406887 GGCGTCTTCCTTGGCATAAGA 60.407 52.381 0.00 0.00 0.00 2.10
5822 7938 2.565841 GCGTCTTCCTTGGCATAAGAT 58.434 47.619 9.70 0.00 32.26 2.40
5823 7939 2.289002 GCGTCTTCCTTGGCATAAGATG 59.711 50.000 16.57 16.57 38.64 2.90
5824 7940 3.797039 CGTCTTCCTTGGCATAAGATGA 58.203 45.455 16.16 7.08 38.12 2.92
5825 7941 3.806521 CGTCTTCCTTGGCATAAGATGAG 59.193 47.826 16.16 0.00 38.12 2.90
5826 7942 4.442052 CGTCTTCCTTGGCATAAGATGAGA 60.442 45.833 16.16 3.05 38.12 3.27
5827 7943 5.431765 GTCTTCCTTGGCATAAGATGAGAA 58.568 41.667 9.70 0.00 32.26 2.87
5828 7944 5.882557 GTCTTCCTTGGCATAAGATGAGAAA 59.117 40.000 9.70 0.00 32.26 2.52
5829 7945 6.545298 GTCTTCCTTGGCATAAGATGAGAAAT 59.455 38.462 9.70 0.00 32.26 2.17
5830 7946 6.769822 TCTTCCTTGGCATAAGATGAGAAATC 59.230 38.462 0.00 0.00 0.00 2.17
5831 7947 6.257994 TCCTTGGCATAAGATGAGAAATCT 57.742 37.500 0.00 0.00 0.00 2.40
5832 7948 7.379059 TCCTTGGCATAAGATGAGAAATCTA 57.621 36.000 0.00 0.00 0.00 1.98
5833 7949 7.982252 TCCTTGGCATAAGATGAGAAATCTAT 58.018 34.615 0.00 0.00 0.00 1.98
5834 7950 8.443176 TCCTTGGCATAAGATGAGAAATCTATT 58.557 33.333 0.00 0.00 0.00 1.73
5835 7951 9.075678 CCTTGGCATAAGATGAGAAATCTATTT 57.924 33.333 0.00 0.00 0.00 1.40
5857 7973 4.981806 TTTTCTGTGAGGTTTTGGTGAG 57.018 40.909 0.00 0.00 0.00 3.51
5858 7974 2.638480 TCTGTGAGGTTTTGGTGAGG 57.362 50.000 0.00 0.00 0.00 3.86
5859 7975 0.954452 CTGTGAGGTTTTGGTGAGGC 59.046 55.000 0.00 0.00 0.00 4.70
5860 7976 0.817634 TGTGAGGTTTTGGTGAGGCG 60.818 55.000 0.00 0.00 0.00 5.52
5861 7977 0.818040 GTGAGGTTTTGGTGAGGCGT 60.818 55.000 0.00 0.00 0.00 5.68
5862 7978 0.817634 TGAGGTTTTGGTGAGGCGTG 60.818 55.000 0.00 0.00 0.00 5.34
5863 7979 2.130073 GAGGTTTTGGTGAGGCGTGC 62.130 60.000 0.00 0.00 0.00 5.34
5864 7980 2.485795 GGTTTTGGTGAGGCGTGCA 61.486 57.895 0.00 0.00 0.00 4.57
5865 7981 1.659794 GTTTTGGTGAGGCGTGCAT 59.340 52.632 0.00 0.00 0.00 3.96
5866 7982 0.664166 GTTTTGGTGAGGCGTGCATG 60.664 55.000 0.09 0.09 0.00 4.06
5867 7983 2.419057 TTTTGGTGAGGCGTGCATGC 62.419 55.000 22.99 22.99 0.00 4.06
5870 7986 4.450122 GTGAGGCGTGCATGCGTG 62.450 66.667 29.24 8.99 35.06 5.34
5874 7990 3.427425 GGCGTGCATGCGTGGTTA 61.427 61.111 23.96 0.00 35.06 2.85
5875 7991 2.760159 GGCGTGCATGCGTGGTTAT 61.760 57.895 23.96 0.00 35.06 1.89
5876 7992 1.433053 GGCGTGCATGCGTGGTTATA 61.433 55.000 23.96 0.00 35.06 0.98
5877 7993 0.042188 GCGTGCATGCGTGGTTATAG 60.042 55.000 16.43 0.00 0.00 1.31
5878 7994 1.566404 CGTGCATGCGTGGTTATAGA 58.434 50.000 14.09 0.00 0.00 1.98
5879 7995 2.135139 CGTGCATGCGTGGTTATAGAT 58.865 47.619 14.09 0.00 0.00 1.98
5880 7996 3.313690 CGTGCATGCGTGGTTATAGATA 58.686 45.455 14.09 0.00 0.00 1.98
5881 7997 3.738791 CGTGCATGCGTGGTTATAGATAA 59.261 43.478 14.09 0.00 0.00 1.75
5882 7998 4.388773 CGTGCATGCGTGGTTATAGATAAT 59.611 41.667 14.09 0.00 0.00 1.28
5883 7999 5.107104 CGTGCATGCGTGGTTATAGATAATT 60.107 40.000 14.09 0.00 0.00 1.40
5884 8000 6.565811 CGTGCATGCGTGGTTATAGATAATTT 60.566 38.462 14.09 0.00 0.00 1.82
5885 8001 7.138736 GTGCATGCGTGGTTATAGATAATTTT 58.861 34.615 14.09 0.00 0.00 1.82
5886 8002 7.647715 GTGCATGCGTGGTTATAGATAATTTTT 59.352 33.333 14.09 0.00 0.00 1.94
5908 8024 7.518731 TTTTTCGTCTTCAATTCTGGTTTTG 57.481 32.000 0.00 0.00 0.00 2.44
5909 8025 4.223320 TCGTCTTCAATTCTGGTTTTGC 57.777 40.909 0.00 0.00 0.00 3.68
5910 8026 3.882888 TCGTCTTCAATTCTGGTTTTGCT 59.117 39.130 0.00 0.00 0.00 3.91
5911 8027 3.976942 CGTCTTCAATTCTGGTTTTGCTG 59.023 43.478 0.00 0.00 0.00 4.41
5912 8028 4.498009 CGTCTTCAATTCTGGTTTTGCTGT 60.498 41.667 0.00 0.00 0.00 4.40
5913 8029 4.741676 GTCTTCAATTCTGGTTTTGCTGTG 59.258 41.667 0.00 0.00 0.00 3.66
5914 8030 3.731652 TCAATTCTGGTTTTGCTGTGG 57.268 42.857 0.00 0.00 0.00 4.17
5915 8031 3.030291 TCAATTCTGGTTTTGCTGTGGT 58.970 40.909 0.00 0.00 0.00 4.16
5916 8032 3.125316 CAATTCTGGTTTTGCTGTGGTG 58.875 45.455 0.00 0.00 0.00 4.17
5917 8033 1.846007 TTCTGGTTTTGCTGTGGTGT 58.154 45.000 0.00 0.00 0.00 4.16
5918 8034 1.846007 TCTGGTTTTGCTGTGGTGTT 58.154 45.000 0.00 0.00 0.00 3.32
5919 8035 1.748493 TCTGGTTTTGCTGTGGTGTTC 59.252 47.619 0.00 0.00 0.00 3.18
5920 8036 1.476085 CTGGTTTTGCTGTGGTGTTCA 59.524 47.619 0.00 0.00 0.00 3.18
5921 8037 2.101249 CTGGTTTTGCTGTGGTGTTCAT 59.899 45.455 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 89 3.025978 ACCGAAGAATATGACCCGTGTA 58.974 45.455 0.00 0.00 0.00 2.90
178 181 5.924475 AAACATCGACCTGACAAAAGTAG 57.076 39.130 0.00 0.00 0.00 2.57
179 182 5.403166 CGTAAACATCGACCTGACAAAAGTA 59.597 40.000 0.00 0.00 0.00 2.24
195 198 8.263940 AGAACATAATACAAGCACGTAAACAT 57.736 30.769 0.00 0.00 0.00 2.71
230 233 8.994500 TGGTAATACATGTCTCCTTTTATACCA 58.006 33.333 0.00 3.19 0.00 3.25
363 468 3.741249 ACATTTGAATGGTGCAATGCAA 58.259 36.364 10.44 0.00 38.94 4.08
389 494 1.060122 GTTAGTGTATGAACGCGGCAC 59.940 52.381 12.47 9.35 41.16 5.01
395 500 5.168569 ACATGTCCAGTTAGTGTATGAACG 58.831 41.667 0.00 0.00 0.00 3.95
396 501 6.163476 TGACATGTCCAGTTAGTGTATGAAC 58.837 40.000 22.85 0.00 0.00 3.18
399 504 7.615582 ATTTGACATGTCCAGTTAGTGTATG 57.384 36.000 22.85 0.00 0.00 2.39
405 512 7.678947 AGAGAAATTTGACATGTCCAGTTAG 57.321 36.000 22.85 0.00 0.00 2.34
425 532 2.813172 TCGTGCATTGCAATGAAAGAGA 59.187 40.909 37.36 24.77 41.47 3.10
511 618 3.680937 CGGCAATGCAAACAGATTCAAAT 59.319 39.130 7.79 0.00 0.00 2.32
514 621 1.885233 TCGGCAATGCAAACAGATTCA 59.115 42.857 7.79 0.00 0.00 2.57
532 639 6.842282 TCTTTCGAATTTGTAAAGTTTCGTCG 59.158 34.615 0.00 0.00 41.22 5.12
540 647 5.070862 CGTCGGTCTTTCGAATTTGTAAAG 58.929 41.667 0.00 9.57 41.05 1.85
547 654 3.855950 GTGATACGTCGGTCTTTCGAATT 59.144 43.478 0.00 0.00 41.05 2.17
568 675 6.567687 TTCCACATATGTTTTCGAACATGT 57.432 33.333 5.37 3.67 42.79 3.21
597 1379 5.650703 CCCCAAAACGGACATACTATTTTCT 59.349 40.000 0.00 0.00 36.56 2.52
598 1380 5.163591 CCCCCAAAACGGACATACTATTTTC 60.164 44.000 0.00 0.00 36.56 2.29
599 1381 4.707934 CCCCCAAAACGGACATACTATTTT 59.292 41.667 0.00 0.00 36.56 1.82
600 1382 4.274978 CCCCCAAAACGGACATACTATTT 58.725 43.478 0.00 0.00 36.56 1.40
601 1383 3.893521 CCCCCAAAACGGACATACTATT 58.106 45.455 0.00 0.00 36.56 1.73
602 1384 2.422377 GCCCCCAAAACGGACATACTAT 60.422 50.000 0.00 0.00 36.56 2.12
603 1385 1.065272 GCCCCCAAAACGGACATACTA 60.065 52.381 0.00 0.00 36.56 1.82
604 1386 0.323087 GCCCCCAAAACGGACATACT 60.323 55.000 0.00 0.00 36.56 2.12
605 1387 0.609681 TGCCCCCAAAACGGACATAC 60.610 55.000 0.00 0.00 36.56 2.39
622 1406 1.022735 CAGAGCCATCTCCAACATGC 58.977 55.000 0.00 0.00 40.22 4.06
644 2036 0.108992 CGGCTTAGTGCGAACCTGTA 60.109 55.000 0.00 0.00 44.05 2.74
651 2043 4.371590 TGCTGCGGCTTAGTGCGA 62.372 61.111 20.27 0.00 44.05 5.10
673 2066 6.591448 TCAGAGTGATACTATTTGCACAAGTG 59.409 38.462 5.29 0.00 33.85 3.16
674 2067 6.591834 GTCAGAGTGATACTATTTGCACAAGT 59.408 38.462 0.00 0.00 33.85 3.16
895 2300 2.362120 CTGGCAGAAGCTTGGGGG 60.362 66.667 9.42 0.00 41.70 5.40
1038 2733 4.475135 GTCTCCCTCGCCTTGGCC 62.475 72.222 6.02 0.00 0.00 5.36
1353 3048 0.822164 ACTATCGAACCGGACCAAGG 59.178 55.000 9.46 0.00 0.00 3.61
1363 3058 4.795308 GCCCCACACATAGTACTATCGAAC 60.795 50.000 12.62 0.00 0.00 3.95
1373 3068 3.031417 GCTCCGCCCCACACATAGT 62.031 63.158 0.00 0.00 0.00 2.12
1374 3069 1.399744 TAGCTCCGCCCCACACATAG 61.400 60.000 0.00 0.00 0.00 2.23
1376 3071 2.687200 TAGCTCCGCCCCACACAT 60.687 61.111 0.00 0.00 0.00 3.21
1377 3072 3.390521 CTAGCTCCGCCCCACACA 61.391 66.667 0.00 0.00 0.00 3.72
1378 3073 4.840005 GCTAGCTCCGCCCCACAC 62.840 72.222 7.70 0.00 0.00 3.82
1570 3265 4.083110 GCACAGTGCTAAACATGTTGAGAT 60.083 41.667 24.84 8.28 40.96 2.75
1591 3286 1.946745 TATCGTGCATTCAATCCGCA 58.053 45.000 0.00 0.00 0.00 5.69
1598 3293 1.948834 CCTGCCATTATCGTGCATTCA 59.051 47.619 0.00 0.00 33.97 2.57
1699 3395 6.245890 AGCTAAATCTGCCTCAGACTTAAT 57.754 37.500 0.00 0.00 43.63 1.40
1750 3446 3.633525 CGATGTTCCACAATGAATGGGAT 59.366 43.478 0.00 0.00 37.85 3.85
1848 3544 4.994217 TCTGACAAGTTATTGCGATGAACA 59.006 37.500 0.00 0.00 40.27 3.18
2238 3934 5.164051 CGGCTTATTGAGTAGCGTTATCATG 60.164 44.000 0.00 0.00 38.28 3.07
2259 3955 5.079397 CCGAGATAAACTACAAAATCGGC 57.921 43.478 0.00 0.00 41.56 5.54
2264 3960 8.723311 CCAAATACACCGAGATAAACTACAAAA 58.277 33.333 0.00 0.00 0.00 2.44
2425 4133 3.944087 AGTTCTTGAGGTCCAATACAGC 58.056 45.455 0.00 0.00 33.68 4.40
2445 4154 4.944619 AGAAAGCCAAAGGGAAAGAAAG 57.055 40.909 0.00 0.00 35.59 2.62
2459 4168 2.185004 TGCTGGTGTTCTAGAAAGCC 57.815 50.000 19.40 17.61 0.00 4.35
2564 4273 3.175438 ACTAAAATGCCCCTTTCTGCT 57.825 42.857 0.00 0.00 0.00 4.24
2655 4491 3.301794 ACCATTGCTATGCTCCATGAA 57.698 42.857 2.27 0.00 0.00 2.57
2841 4720 8.017373 TGAATCTCTAAAGAACGCAAAAGATTG 58.983 33.333 0.00 0.00 35.89 2.67
2851 4730 4.317698 GCGCTGATGAATCTCTAAAGAACG 60.318 45.833 0.00 0.00 34.49 3.95
2872 4751 0.460311 ATTCTACCTCAACCTCCGCG 59.540 55.000 0.00 0.00 0.00 6.46
2874 4753 4.939052 ATACATTCTACCTCAACCTCCG 57.061 45.455 0.00 0.00 0.00 4.63
2950 4857 7.859377 CAGCTTTTAAGATATAGTGCACCAATG 59.141 37.037 14.63 0.00 0.00 2.82
2991 4898 5.587388 ATGAATGCGTCATTTCAGGATTT 57.413 34.783 6.54 0.00 45.13 2.17
2992 4899 5.824624 ACTATGAATGCGTCATTTCAGGATT 59.175 36.000 7.90 0.00 45.13 3.01
3038 4945 6.683974 AAATCCTGTTAGCATGACATACAC 57.316 37.500 0.00 0.00 0.00 2.90
3043 4950 7.112122 ACAAGATAAATCCTGTTAGCATGACA 58.888 34.615 0.00 0.00 27.36 3.58
3044 4951 7.559590 ACAAGATAAATCCTGTTAGCATGAC 57.440 36.000 0.00 0.00 27.36 3.06
3126 5033 2.540101 GGAAGTATCTTCGCCACATTCG 59.460 50.000 3.88 0.00 0.00 3.34
3161 5068 5.782893 ACCAAAGTATGCTTTTAGTTGCA 57.217 34.783 6.00 0.00 42.54 4.08
3284 5191 2.866762 GTGGACTGACTGCCGATATTTC 59.133 50.000 0.00 0.00 0.00 2.17
3408 5315 5.929415 TCACAATGCACGAAACTGATTACTA 59.071 36.000 0.00 0.00 0.00 1.82
3425 5332 4.333649 ACAGACTGCCGATATTTCACAATG 59.666 41.667 1.25 0.00 0.00 2.82
3439 5346 1.551452 ACTCTACTGGACAGACTGCC 58.449 55.000 6.29 5.69 0.00 4.85
3488 5395 1.151668 CCAACGAAGGAGCACAAGAG 58.848 55.000 0.00 0.00 0.00 2.85
3525 5433 7.253321 GCAAAATTCCGCTCTTAATTTAGAACG 60.253 37.037 9.65 9.65 34.93 3.95
3574 5482 0.107945 GGAGCAGGAGCCTGTAACTG 60.108 60.000 17.23 0.00 45.24 3.16
3627 5535 6.655062 TGTAACAAGTCACACGATCAAATTC 58.345 36.000 0.00 0.00 0.00 2.17
3636 5544 6.367695 TCCTATCAAATGTAACAAGTCACACG 59.632 38.462 0.00 0.00 0.00 4.49
3670 5578 4.460382 AGGCATTCTTGTGTGTAAATCAGG 59.540 41.667 0.00 0.00 0.00 3.86
3756 5667 3.251729 CCACGCCTATGGAAATGATCAAG 59.748 47.826 0.00 0.00 43.02 3.02
3846 5758 6.593382 CCTTCTTTTTCACAAAATTGGTGTCA 59.407 34.615 0.00 0.00 37.52 3.58
3912 5836 8.750515 TTCCATAATGCTGAAACATAAGATGA 57.249 30.769 0.00 0.00 0.00 2.92
3958 5883 2.932261 ACCACCACTTCTGGAGAAAAC 58.068 47.619 0.00 0.00 40.55 2.43
4043 5968 0.807496 GAGGGCATTGAACAGTCAGC 59.193 55.000 0.00 0.00 34.49 4.26
4121 6046 6.656693 AGCATACAAGCTAAAAACTCATGAGT 59.343 34.615 22.89 22.89 44.50 3.41
4144 6069 4.507710 TGTCAGGTCAGACAATATTCAGC 58.492 43.478 2.17 0.00 44.92 4.26
4155 6080 3.507233 GCATTTTTGGATGTCAGGTCAGA 59.493 43.478 0.00 0.00 0.00 3.27
4156 6081 3.256383 TGCATTTTTGGATGTCAGGTCAG 59.744 43.478 0.00 0.00 0.00 3.51
4157 6082 3.229293 TGCATTTTTGGATGTCAGGTCA 58.771 40.909 0.00 0.00 0.00 4.02
4278 6207 3.809832 AGTGCTAGTGTCACAAATCACAC 59.190 43.478 5.62 4.87 42.84 3.82
4335 6264 7.817418 AGCACTTCAAAATACTACCAAGAAA 57.183 32.000 0.00 0.00 0.00 2.52
4438 6371 2.258591 GAGCAAGACTCGTCGCCA 59.741 61.111 0.00 0.00 35.18 5.69
4467 6402 4.141688 GGGCTATACTCTAAACCAAGCACT 60.142 45.833 0.00 0.00 0.00 4.40
4473 6408 4.284178 ACGAAGGGCTATACTCTAAACCA 58.716 43.478 0.00 0.00 0.00 3.67
4520 6457 8.788325 AGGTTTTCGCTTAACTATTTATGAGT 57.212 30.769 0.00 0.00 0.00 3.41
4670 6656 3.706600 AAACGCAAGGAATAGGTACCA 57.293 42.857 15.94 0.00 46.39 3.25
4726 6712 7.035612 GCAATGTTTATAACAGAGAAAAGGGG 58.964 38.462 0.00 0.00 45.95 4.79
4746 6733 5.589192 GAAGAGGATCCTTTTGATGCAATG 58.411 41.667 21.66 0.00 43.79 2.82
4774 6761 3.344535 TCCAGCATCTTATCCCTACCA 57.655 47.619 0.00 0.00 0.00 3.25
4804 6791 1.202371 TCGTCATTCTGTATCACGGCC 60.202 52.381 0.00 0.00 0.00 6.13
4816 6803 1.450312 CAGCCCTGGGTCGTCATTC 60.450 63.158 15.56 0.00 0.00 2.67
4861 6848 4.072088 GGAACAAGACGGCGTGCG 62.072 66.667 21.19 7.95 0.00 5.34
4939 6926 1.018148 CCTCGCTAGTCATCGTGTCT 58.982 55.000 0.00 0.00 0.00 3.41
4947 6934 3.056107 ACAGTAAATTGCCTCGCTAGTCA 60.056 43.478 0.00 0.00 0.00 3.41
4978 6965 7.811117 ATTCTGTAGCTAACTAGTACTCCTG 57.189 40.000 0.00 0.00 0.00 3.86
4980 6967 8.223177 TGAATTCTGTAGCTAACTAGTACTCC 57.777 38.462 7.05 0.00 0.00 3.85
5005 6992 0.623723 AGTACATCGGGCCACCAAAT 59.376 50.000 4.39 0.00 36.13 2.32
5057 7044 5.045578 AGGTCTGCCTTTACACAACTCATAT 60.046 40.000 0.00 0.00 44.18 1.78
5169 7280 8.023128 CCTTTGTTCCAATTACACAAGATACAG 58.977 37.037 0.00 0.00 32.16 2.74
5203 7314 0.104120 TCACGGCCGATATCAACCAG 59.896 55.000 35.90 7.77 0.00 4.00
5218 7329 1.893801 ACAGAGGGAGTAGGTTTCACG 59.106 52.381 0.00 0.00 0.00 4.35
5229 7340 7.607991 ACAACAAGTATTTCATTACAGAGGGAG 59.392 37.037 0.00 0.00 0.00 4.30
5230 7341 7.458397 ACAACAAGTATTTCATTACAGAGGGA 58.542 34.615 0.00 0.00 0.00 4.20
5231 7342 7.687941 ACAACAAGTATTTCATTACAGAGGG 57.312 36.000 0.00 0.00 0.00 4.30
5232 7343 8.023128 CCAACAACAAGTATTTCATTACAGAGG 58.977 37.037 0.00 0.00 0.00 3.69
5233 7344 8.023128 CCCAACAACAAGTATTTCATTACAGAG 58.977 37.037 0.00 0.00 0.00 3.35
5234 7345 7.040062 CCCCAACAACAAGTATTTCATTACAGA 60.040 37.037 0.00 0.00 0.00 3.41
5235 7346 7.090173 CCCCAACAACAAGTATTTCATTACAG 58.910 38.462 0.00 0.00 0.00 2.74
5236 7347 6.015010 CCCCCAACAACAAGTATTTCATTACA 60.015 38.462 0.00 0.00 0.00 2.41
5237 7348 6.209788 TCCCCCAACAACAAGTATTTCATTAC 59.790 38.462 0.00 0.00 0.00 1.89
5238 7349 6.315714 TCCCCCAACAACAAGTATTTCATTA 58.684 36.000 0.00 0.00 0.00 1.90
5239 7350 5.151454 TCCCCCAACAACAAGTATTTCATT 58.849 37.500 0.00 0.00 0.00 2.57
5240 7351 4.746466 TCCCCCAACAACAAGTATTTCAT 58.254 39.130 0.00 0.00 0.00 2.57
5241 7352 4.186077 TCCCCCAACAACAAGTATTTCA 57.814 40.909 0.00 0.00 0.00 2.69
5242 7353 5.069914 AGTTTCCCCCAACAACAAGTATTTC 59.930 40.000 0.00 0.00 0.00 2.17
5243 7354 4.966168 AGTTTCCCCCAACAACAAGTATTT 59.034 37.500 0.00 0.00 0.00 1.40
5244 7355 4.552674 AGTTTCCCCCAACAACAAGTATT 58.447 39.130 0.00 0.00 0.00 1.89
5245 7356 4.193240 AGTTTCCCCCAACAACAAGTAT 57.807 40.909 0.00 0.00 0.00 2.12
5246 7357 3.673543 AGTTTCCCCCAACAACAAGTA 57.326 42.857 0.00 0.00 0.00 2.24
5247 7358 2.499693 CAAGTTTCCCCCAACAACAAGT 59.500 45.455 0.00 0.00 0.00 3.16
5248 7359 2.763448 TCAAGTTTCCCCCAACAACAAG 59.237 45.455 0.00 0.00 0.00 3.16
5249 7360 2.763448 CTCAAGTTTCCCCCAACAACAA 59.237 45.455 0.00 0.00 0.00 2.83
5250 7361 2.383855 CTCAAGTTTCCCCCAACAACA 58.616 47.619 0.00 0.00 0.00 3.33
5251 7362 1.686587 CCTCAAGTTTCCCCCAACAAC 59.313 52.381 0.00 0.00 0.00 3.32
5252 7363 1.412361 CCCTCAAGTTTCCCCCAACAA 60.412 52.381 0.00 0.00 0.00 2.83
5253 7364 0.187361 CCCTCAAGTTTCCCCCAACA 59.813 55.000 0.00 0.00 0.00 3.33
5254 7365 0.481128 TCCCTCAAGTTTCCCCCAAC 59.519 55.000 0.00 0.00 0.00 3.77
5255 7366 1.236708 TTCCCTCAAGTTTCCCCCAA 58.763 50.000 0.00 0.00 0.00 4.12
5256 7367 1.466858 ATTCCCTCAAGTTTCCCCCA 58.533 50.000 0.00 0.00 0.00 4.96
5257 7368 2.581246 ACTATTCCCTCAAGTTTCCCCC 59.419 50.000 0.00 0.00 0.00 5.40
5258 7369 4.317530 AACTATTCCCTCAAGTTTCCCC 57.682 45.455 0.00 0.00 29.25 4.81
5259 7370 6.063496 ACTAACTATTCCCTCAAGTTTCCC 57.937 41.667 0.00 0.00 35.23 3.97
5260 7371 9.110502 CATAACTAACTATTCCCTCAAGTTTCC 57.889 37.037 0.00 0.00 35.23 3.13
5261 7372 9.110502 CCATAACTAACTATTCCCTCAAGTTTC 57.889 37.037 0.00 0.00 35.23 2.78
5262 7373 8.832735 TCCATAACTAACTATTCCCTCAAGTTT 58.167 33.333 0.00 0.00 35.23 2.66
5263 7374 8.388656 TCCATAACTAACTATTCCCTCAAGTT 57.611 34.615 0.00 0.00 37.27 2.66
5264 7375 7.989947 TCCATAACTAACTATTCCCTCAAGT 57.010 36.000 0.00 0.00 0.00 3.16
5265 7376 9.853177 ATTTCCATAACTAACTATTCCCTCAAG 57.147 33.333 0.00 0.00 0.00 3.02
5266 7377 9.627123 CATTTCCATAACTAACTATTCCCTCAA 57.373 33.333 0.00 0.00 0.00 3.02
5267 7378 7.719633 GCATTTCCATAACTAACTATTCCCTCA 59.280 37.037 0.00 0.00 0.00 3.86
5268 7379 7.175119 GGCATTTCCATAACTAACTATTCCCTC 59.825 40.741 0.00 0.00 34.01 4.30
5269 7380 7.004691 GGCATTTCCATAACTAACTATTCCCT 58.995 38.462 0.00 0.00 34.01 4.20
5270 7381 6.072673 CGGCATTTCCATAACTAACTATTCCC 60.073 42.308 0.00 0.00 34.01 3.97
5271 7382 6.708949 TCGGCATTTCCATAACTAACTATTCC 59.291 38.462 0.00 0.00 34.01 3.01
5272 7383 7.724305 TCGGCATTTCCATAACTAACTATTC 57.276 36.000 0.00 0.00 34.01 1.75
5273 7384 7.174946 CCATCGGCATTTCCATAACTAACTATT 59.825 37.037 0.00 0.00 34.01 1.73
5274 7385 6.655003 CCATCGGCATTTCCATAACTAACTAT 59.345 38.462 0.00 0.00 34.01 2.12
5275 7386 5.995282 CCATCGGCATTTCCATAACTAACTA 59.005 40.000 0.00 0.00 34.01 2.24
5276 7387 4.821805 CCATCGGCATTTCCATAACTAACT 59.178 41.667 0.00 0.00 34.01 2.24
5470 7585 1.536766 CTGCTCCAAGATTCGTGCAAA 59.463 47.619 0.00 0.00 0.00 3.68
5472 7587 1.300971 GCTGCTCCAAGATTCGTGCA 61.301 55.000 0.00 0.00 0.00 4.57
5478 7593 0.807496 GCTTTCGCTGCTCCAAGATT 59.193 50.000 0.00 0.00 0.00 2.40
5508 7623 1.447140 CCCGAACGGATTTGAGCGA 60.447 57.895 15.07 0.00 37.50 4.93
5509 7624 2.461110 CCCCGAACGGATTTGAGCG 61.461 63.158 15.07 0.00 37.50 5.03
5523 7638 1.228337 ACGGTTTTCCTTTCCCCCG 60.228 57.895 0.00 0.00 41.09 5.73
5595 7711 3.872771 GCCATGGTCAATTGCAAAATAGG 59.127 43.478 14.67 0.00 0.00 2.57
5666 7782 2.744202 CAAAAAGGTCTGATCTCCCACG 59.256 50.000 0.00 0.00 0.00 4.94
5735 7851 4.261801 GGGGGATAAATGTACCATCGATG 58.738 47.826 18.76 18.76 0.00 3.84
5736 7852 4.569719 GGGGGATAAATGTACCATCGAT 57.430 45.455 0.00 0.00 0.00 3.59
5755 7871 4.402528 TGATTGTGTCGGCGGGGG 62.403 66.667 7.21 0.00 0.00 5.40
5756 7872 3.124921 GTGATTGTGTCGGCGGGG 61.125 66.667 7.21 0.00 0.00 5.73
5757 7873 1.963855 TTGTGATTGTGTCGGCGGG 60.964 57.895 7.21 0.00 0.00 6.13
5758 7874 1.206578 GTTGTGATTGTGTCGGCGG 59.793 57.895 7.21 0.00 0.00 6.13
5759 7875 0.306228 TTGTTGTGATTGTGTCGGCG 59.694 50.000 0.00 0.00 0.00 6.46
5760 7876 1.333619 ACTTGTTGTGATTGTGTCGGC 59.666 47.619 0.00 0.00 0.00 5.54
5761 7877 3.691049 AACTTGTTGTGATTGTGTCGG 57.309 42.857 0.00 0.00 0.00 4.79
5762 7878 4.657055 TCAAACTTGTTGTGATTGTGTCG 58.343 39.130 0.00 0.00 0.00 4.35
5763 7879 6.531240 ACATTCAAACTTGTTGTGATTGTGTC 59.469 34.615 15.96 0.00 35.60 3.67
5764 7880 6.397272 ACATTCAAACTTGTTGTGATTGTGT 58.603 32.000 15.96 11.11 35.60 3.72
5765 7881 6.890663 ACATTCAAACTTGTTGTGATTGTG 57.109 33.333 15.96 10.76 35.60 3.33
5766 7882 7.293402 CAACATTCAAACTTGTTGTGATTGT 57.707 32.000 7.45 13.57 44.79 2.71
5791 7907 2.677037 AAGGAAGACGCCTTACGATTGG 60.677 50.000 0.00 0.00 46.18 3.16
5792 7908 2.348666 CAAGGAAGACGCCTTACGATTG 59.651 50.000 0.00 0.00 46.29 2.67
5793 7909 2.618053 CAAGGAAGACGCCTTACGATT 58.382 47.619 0.00 0.00 46.29 3.34
5794 7910 1.134788 CCAAGGAAGACGCCTTACGAT 60.135 52.381 0.00 0.00 46.29 3.73
5795 7911 0.245539 CCAAGGAAGACGCCTTACGA 59.754 55.000 0.00 0.00 46.29 3.43
5796 7912 1.359459 GCCAAGGAAGACGCCTTACG 61.359 60.000 0.00 0.00 46.29 3.18
5797 7913 0.321298 TGCCAAGGAAGACGCCTTAC 60.321 55.000 0.00 0.00 46.29 2.34
5798 7914 0.618458 ATGCCAAGGAAGACGCCTTA 59.382 50.000 0.00 0.00 46.29 2.69
5800 7916 0.618458 TTATGCCAAGGAAGACGCCT 59.382 50.000 0.00 0.00 40.93 5.52
5801 7917 1.017387 CTTATGCCAAGGAAGACGCC 58.983 55.000 0.00 0.00 0.00 5.68
5802 7918 2.024176 TCTTATGCCAAGGAAGACGC 57.976 50.000 0.00 0.00 0.00 5.19
5803 7919 3.797039 TCATCTTATGCCAAGGAAGACG 58.203 45.455 0.00 0.00 32.25 4.18
5804 7920 5.028549 TCTCATCTTATGCCAAGGAAGAC 57.971 43.478 0.00 0.00 32.25 3.01
5805 7921 5.698741 TTCTCATCTTATGCCAAGGAAGA 57.301 39.130 0.00 0.00 33.90 2.87
5806 7922 6.771749 AGATTTCTCATCTTATGCCAAGGAAG 59.228 38.462 0.00 0.00 0.00 3.46
5807 7923 6.666678 AGATTTCTCATCTTATGCCAAGGAA 58.333 36.000 0.00 0.00 0.00 3.36
5808 7924 6.257994 AGATTTCTCATCTTATGCCAAGGA 57.742 37.500 0.00 0.00 0.00 3.36
5809 7925 8.632906 AATAGATTTCTCATCTTATGCCAAGG 57.367 34.615 0.00 0.00 0.00 3.61
5835 7951 4.159506 CCTCACCAAAACCTCACAGAAAAA 59.840 41.667 0.00 0.00 0.00 1.94
5836 7952 3.699038 CCTCACCAAAACCTCACAGAAAA 59.301 43.478 0.00 0.00 0.00 2.29
5837 7953 3.287222 CCTCACCAAAACCTCACAGAAA 58.713 45.455 0.00 0.00 0.00 2.52
5838 7954 2.930950 CCTCACCAAAACCTCACAGAA 58.069 47.619 0.00 0.00 0.00 3.02
5839 7955 1.476833 GCCTCACCAAAACCTCACAGA 60.477 52.381 0.00 0.00 0.00 3.41
5840 7956 0.954452 GCCTCACCAAAACCTCACAG 59.046 55.000 0.00 0.00 0.00 3.66
5841 7957 0.817634 CGCCTCACCAAAACCTCACA 60.818 55.000 0.00 0.00 0.00 3.58
5842 7958 0.818040 ACGCCTCACCAAAACCTCAC 60.818 55.000 0.00 0.00 0.00 3.51
5843 7959 0.817634 CACGCCTCACCAAAACCTCA 60.818 55.000 0.00 0.00 0.00 3.86
5844 7960 1.949257 CACGCCTCACCAAAACCTC 59.051 57.895 0.00 0.00 0.00 3.85
5845 7961 2.193536 GCACGCCTCACCAAAACCT 61.194 57.895 0.00 0.00 0.00 3.50
5846 7962 1.805428 ATGCACGCCTCACCAAAACC 61.805 55.000 0.00 0.00 0.00 3.27
5847 7963 0.664166 CATGCACGCCTCACCAAAAC 60.664 55.000 0.00 0.00 0.00 2.43
5848 7964 1.659233 CATGCACGCCTCACCAAAA 59.341 52.632 0.00 0.00 0.00 2.44
5849 7965 2.918345 GCATGCACGCCTCACCAAA 61.918 57.895 14.21 0.00 0.00 3.28
5850 7966 3.364441 GCATGCACGCCTCACCAA 61.364 61.111 14.21 0.00 0.00 3.67
5853 7969 4.450122 CACGCATGCACGCCTCAC 62.450 66.667 19.57 0.00 36.19 3.51
5856 7972 3.770371 TATAACCACGCATGCACGCCT 62.770 52.381 19.57 0.96 36.19 5.52
5857 7973 1.433053 TATAACCACGCATGCACGCC 61.433 55.000 19.57 0.00 36.19 5.68
5858 7974 0.042188 CTATAACCACGCATGCACGC 60.042 55.000 19.57 0.00 36.19 5.34
5859 7975 1.566404 TCTATAACCACGCATGCACG 58.434 50.000 19.57 7.47 39.50 5.34
5860 7976 5.862924 ATTATCTATAACCACGCATGCAC 57.137 39.130 19.57 0.00 0.00 4.57
5861 7977 6.875948 AAATTATCTATAACCACGCATGCA 57.124 33.333 19.57 0.00 0.00 3.96
5884 8000 6.035542 GCAAAACCAGAATTGAAGACGAAAAA 59.964 34.615 0.00 0.00 0.00 1.94
5885 8001 5.518487 GCAAAACCAGAATTGAAGACGAAAA 59.482 36.000 0.00 0.00 0.00 2.29
5886 8002 5.040635 GCAAAACCAGAATTGAAGACGAAA 58.959 37.500 0.00 0.00 0.00 3.46
5887 8003 4.338118 AGCAAAACCAGAATTGAAGACGAA 59.662 37.500 0.00 0.00 0.00 3.85
5888 8004 3.882888 AGCAAAACCAGAATTGAAGACGA 59.117 39.130 0.00 0.00 0.00 4.20
5889 8005 3.976942 CAGCAAAACCAGAATTGAAGACG 59.023 43.478 0.00 0.00 0.00 4.18
5890 8006 4.741676 CACAGCAAAACCAGAATTGAAGAC 59.258 41.667 0.00 0.00 0.00 3.01
5891 8007 4.202141 CCACAGCAAAACCAGAATTGAAGA 60.202 41.667 0.00 0.00 0.00 2.87
5892 8008 4.053295 CCACAGCAAAACCAGAATTGAAG 58.947 43.478 0.00 0.00 0.00 3.02
5893 8009 3.450457 ACCACAGCAAAACCAGAATTGAA 59.550 39.130 0.00 0.00 0.00 2.69
5894 8010 3.030291 ACCACAGCAAAACCAGAATTGA 58.970 40.909 0.00 0.00 0.00 2.57
5895 8011 3.125316 CACCACAGCAAAACCAGAATTG 58.875 45.455 0.00 0.00 0.00 2.32
5896 8012 2.765699 ACACCACAGCAAAACCAGAATT 59.234 40.909 0.00 0.00 0.00 2.17
5897 8013 2.387757 ACACCACAGCAAAACCAGAAT 58.612 42.857 0.00 0.00 0.00 2.40
5898 8014 1.846007 ACACCACAGCAAAACCAGAA 58.154 45.000 0.00 0.00 0.00 3.02
5899 8015 1.748493 GAACACCACAGCAAAACCAGA 59.252 47.619 0.00 0.00 0.00 3.86
5900 8016 1.476085 TGAACACCACAGCAAAACCAG 59.524 47.619 0.00 0.00 0.00 4.00
5901 8017 1.550327 TGAACACCACAGCAAAACCA 58.450 45.000 0.00 0.00 0.00 3.67
5902 8018 2.888834 ATGAACACCACAGCAAAACC 57.111 45.000 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.