Multiple sequence alignment - TraesCS7D01G403400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G403400 chr7D 100.000 4160 0 0 1 4160 520414562 520410403 0.000000e+00 7683.0
1 TraesCS7D01G403400 chr7D 91.786 487 23 9 930 1407 638016636 638017114 0.000000e+00 662.0
2 TraesCS7D01G403400 chr7D 85.811 296 40 2 1996 2290 538579415 538579709 3.120000e-81 313.0
3 TraesCS7D01G403400 chr7D 94.675 169 9 0 3895 4063 312574292 312574124 3.190000e-66 263.0
4 TraesCS7D01G403400 chr7D 90.909 77 6 1 2856 2932 428723350 428723275 7.360000e-18 102.0
5 TraesCS7D01G403400 chr7D 95.238 63 3 0 2863 2925 631542768 631542830 2.650000e-17 100.0
6 TraesCS7D01G403400 chr7A 91.210 2355 122 31 1 2290 596731729 596729395 0.000000e+00 3123.0
7 TraesCS7D01G403400 chr7A 90.000 930 59 17 2923 3821 596728734 596727808 0.000000e+00 1171.0
8 TraesCS7D01G403400 chr7A 88.195 1025 62 20 1098 2110 517128098 517129075 0.000000e+00 1168.0
9 TraesCS7D01G403400 chr7A 88.095 588 48 15 2294 2864 596729315 596728733 0.000000e+00 678.0
10 TraesCS7D01G403400 chr7A 95.181 166 8 0 3895 4060 643186890 643187055 3.190000e-66 263.0
11 TraesCS7D01G403400 chr7A 94.186 172 9 1 3889 4059 156115833 156116004 1.150000e-65 261.0
12 TraesCS7D01G403400 chr7B 90.995 2021 85 45 126 2110 553638705 553636746 0.000000e+00 2634.0
13 TraesCS7D01G403400 chr7B 89.517 849 51 18 2987 3821 553635945 553635121 0.000000e+00 1040.0
14 TraesCS7D01G403400 chr7B 89.189 592 38 7 2294 2864 553636575 553635989 0.000000e+00 715.0
15 TraesCS7D01G403400 chr7B 97.368 38 1 0 2923 2960 553635990 553635953 9.650000e-07 65.8
16 TraesCS7D01G403400 chr6B 87.646 1028 65 24 1098 2110 103259395 103260375 0.000000e+00 1138.0
17 TraesCS7D01G403400 chrUn 87.122 1025 73 24 1098 2110 184899845 184900822 0.000000e+00 1107.0
18 TraesCS7D01G403400 chrUn 85.853 721 60 14 1403 2110 218749831 218749140 0.000000e+00 728.0
19 TraesCS7D01G403400 chr2B 87.122 1025 73 24 1098 2110 755391625 755390648 0.000000e+00 1107.0
20 TraesCS7D01G403400 chr2B 87.578 483 42 9 935 1407 227175228 227174754 1.020000e-150 544.0
21 TraesCS7D01G403400 chr2B 89.796 196 19 1 2294 2488 102555335 102555530 2.480000e-62 250.0
22 TraesCS7D01G403400 chr2A 86.927 1025 76 21 1098 2110 82805698 82804720 0.000000e+00 1098.0
23 TraesCS7D01G403400 chr2A 85.655 481 66 3 1811 2290 443003588 443004066 1.730000e-138 503.0
24 TraesCS7D01G403400 chr5B 86.829 1025 77 15 1098 2110 553580054 553579076 0.000000e+00 1092.0
25 TraesCS7D01G403400 chr4D 85.769 787 85 13 1528 2292 242983039 242982258 0.000000e+00 808.0
26 TraesCS7D01G403400 chr5D 87.050 556 65 7 1739 2290 300556094 300555542 4.570000e-174 621.0
27 TraesCS7D01G403400 chr5D 94.253 174 10 0 3887 4060 13287945 13287772 2.470000e-67 267.0
28 TraesCS7D01G403400 chr5D 94.643 168 9 0 3892 4059 42949727 42949560 1.150000e-65 261.0
29 TraesCS7D01G403400 chr5D 89.796 196 19 1 2294 2488 300555466 300555271 2.480000e-62 250.0
30 TraesCS7D01G403400 chr5D 96.774 62 2 0 2863 2924 472275345 472275284 2.050000e-18 104.0
31 TraesCS7D01G403400 chr5D 95.238 63 2 1 2863 2925 489809788 489809849 9.520000e-17 99.0
32 TraesCS7D01G403400 chr6A 85.811 296 40 2 1996 2290 413098209 413097915 3.120000e-81 313.0
33 TraesCS7D01G403400 chr6A 88.095 210 21 3 2294 2499 413097835 413097626 3.210000e-61 246.0
34 TraesCS7D01G403400 chr6A 93.056 72 5 0 2862 2933 73455665 73455594 5.690000e-19 106.0
35 TraesCS7D01G403400 chr2D 85.811 296 40 2 1996 2290 166478868 166479162 3.120000e-81 313.0
36 TraesCS7D01G403400 chr2D 95.181 166 8 0 3895 4060 395175256 395175091 3.190000e-66 263.0
37 TraesCS7D01G403400 chr2D 90.306 196 18 1 2294 2488 166479242 166479437 5.340000e-64 255.0
38 TraesCS7D01G403400 chr2D 91.549 71 6 0 2863 2933 11793858 11793788 9.520000e-17 99.0
39 TraesCS7D01G403400 chr3B 82.153 353 50 9 1015 1359 1618223 1617876 1.460000e-74 291.0
40 TraesCS7D01G403400 chr3B 88.945 199 21 1 2294 2491 738227482 738227284 1.160000e-60 244.0
41 TraesCS7D01G403400 chr6D 95.238 168 8 0 3892 4059 218407207 218407374 2.470000e-67 267.0
42 TraesCS7D01G403400 chr3D 94.675 169 9 0 3895 4063 131406529 131406697 3.190000e-66 263.0
43 TraesCS7D01G403400 chr1D 95.181 166 8 0 3895 4060 220154298 220154133 3.190000e-66 263.0
44 TraesCS7D01G403400 chr4B 89.286 196 20 1 2294 2488 602164652 602164457 1.160000e-60 244.0
45 TraesCS7D01G403400 chr4B 89.286 196 20 1 2294 2488 610017223 610017418 1.160000e-60 244.0
46 TraesCS7D01G403400 chr1B 98.387 62 1 0 2863 2924 279776766 279776705 4.400000e-20 110.0
47 TraesCS7D01G403400 chr1B 91.667 72 2 1 2863 2930 642043805 642043876 3.420000e-16 97.1
48 TraesCS7D01G403400 chr4A 93.846 65 2 1 2863 2927 295020458 295020396 3.420000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G403400 chr7D 520410403 520414562 4159 True 7683.000000 7683 100.000000 1 4160 1 chr7D.!!$R3 4159
1 TraesCS7D01G403400 chr7A 596727808 596731729 3921 True 1657.333333 3123 89.768333 1 3821 3 chr7A.!!$R1 3820
2 TraesCS7D01G403400 chr7A 517128098 517129075 977 False 1168.000000 1168 88.195000 1098 2110 1 chr7A.!!$F2 1012
3 TraesCS7D01G403400 chr7B 553635121 553638705 3584 True 1113.700000 2634 91.767250 126 3821 4 chr7B.!!$R1 3695
4 TraesCS7D01G403400 chr6B 103259395 103260375 980 False 1138.000000 1138 87.646000 1098 2110 1 chr6B.!!$F1 1012
5 TraesCS7D01G403400 chrUn 184899845 184900822 977 False 1107.000000 1107 87.122000 1098 2110 1 chrUn.!!$F1 1012
6 TraesCS7D01G403400 chrUn 218749140 218749831 691 True 728.000000 728 85.853000 1403 2110 1 chrUn.!!$R1 707
7 TraesCS7D01G403400 chr2B 755390648 755391625 977 True 1107.000000 1107 87.122000 1098 2110 1 chr2B.!!$R2 1012
8 TraesCS7D01G403400 chr2A 82804720 82805698 978 True 1098.000000 1098 86.927000 1098 2110 1 chr2A.!!$R1 1012
9 TraesCS7D01G403400 chr5B 553579076 553580054 978 True 1092.000000 1092 86.829000 1098 2110 1 chr5B.!!$R1 1012
10 TraesCS7D01G403400 chr4D 242982258 242983039 781 True 808.000000 808 85.769000 1528 2292 1 chr4D.!!$R1 764
11 TraesCS7D01G403400 chr5D 300555271 300556094 823 True 435.500000 621 88.423000 1739 2488 2 chr5D.!!$R4 749
12 TraesCS7D01G403400 chr6A 413097626 413098209 583 True 279.500000 313 86.953000 1996 2499 2 chr6A.!!$R2 503
13 TraesCS7D01G403400 chr2D 166478868 166479437 569 False 284.000000 313 88.058500 1996 2488 2 chr2D.!!$F1 492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
794 827 0.034896 CGGAGATTATTCCCCCGTGG 59.965 60.0 0.00 0.0 35.24 4.94 F
1843 1950 0.308684 TGAGCTCTTGCGCTTTTGTG 59.691 50.0 16.19 0.0 45.42 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2362 2627 0.443869 GCACACAGCATAACAGACGG 59.556 55.0 0.0 0.00 44.79 4.79 R
3398 3701 0.249911 AGAGTTGCACGAGTCCCAAC 60.250 55.0 0.0 7.52 39.20 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.028020 GTGGCAGCTAACTACACTTCCT 60.028 50.000 0.00 0.00 32.85 3.36
35 36 9.522804 CTAACTACACTTCCTTTCATACTGATC 57.477 37.037 0.00 0.00 0.00 2.92
36 37 6.879400 ACTACACTTCCTTTCATACTGATCC 58.121 40.000 0.00 0.00 0.00 3.36
63 64 5.016173 TCATTCATCCCCGAAAGAAATTGT 58.984 37.500 0.00 0.00 0.00 2.71
76 77 6.589523 CGAAAGAAATTGTTAATGCCATTCCA 59.410 34.615 0.00 0.00 0.00 3.53
90 91 3.629398 GCCATTCCAGTTCATCTTGGTAG 59.371 47.826 0.00 0.00 0.00 3.18
92 93 4.637534 CCATTCCAGTTCATCTTGGTAGTG 59.362 45.833 0.00 0.00 0.00 2.74
93 94 5.491070 CATTCCAGTTCATCTTGGTAGTGA 58.509 41.667 0.00 0.00 0.00 3.41
94 95 4.808414 TCCAGTTCATCTTGGTAGTGAG 57.192 45.455 0.00 0.00 0.00 3.51
95 96 3.055819 TCCAGTTCATCTTGGTAGTGAGC 60.056 47.826 0.00 0.00 0.00 4.26
151 165 6.073314 TCCTAGTACTGTTCACTAACCACTT 58.927 40.000 5.39 0.00 34.49 3.16
153 167 6.208994 CCTAGTACTGTTCACTAACCACTTCT 59.791 42.308 5.39 0.00 34.49 2.85
183 197 1.000955 ACCTTGCTACCTGAACTGACG 59.999 52.381 0.00 0.00 0.00 4.35
190 204 0.464036 ACCTGAACTGACGACAAGCA 59.536 50.000 0.00 0.00 0.00 3.91
191 205 1.134521 ACCTGAACTGACGACAAGCAA 60.135 47.619 0.00 0.00 0.00 3.91
192 206 1.939934 CCTGAACTGACGACAAGCAAA 59.060 47.619 0.00 0.00 0.00 3.68
193 207 2.032549 CCTGAACTGACGACAAGCAAAG 60.033 50.000 0.00 0.00 0.00 2.77
194 208 1.330521 TGAACTGACGACAAGCAAAGC 59.669 47.619 0.00 0.00 0.00 3.51
206 220 2.704725 AGCAAAGCATTGTGGTAACG 57.295 45.000 3.31 0.00 38.85 3.18
235 250 0.755079 TGCCATTCCAGATCCTCGAG 59.245 55.000 5.13 5.13 0.00 4.04
381 396 2.887568 GTCCTGCATCGGCGACAG 60.888 66.667 13.76 16.25 45.35 3.51
431 446 2.352032 AAGGAGAAGGCCGAGGACG 61.352 63.158 0.00 0.00 39.43 4.79
496 514 4.116328 CCGCTGCTCGACGAGGAA 62.116 66.667 25.31 1.12 41.67 3.36
508 526 1.064357 GACGAGGAAGATGGAGACGAC 59.936 57.143 0.00 0.00 0.00 4.34
564 582 1.880675 AGGAGTATGATACGACAGCCG 59.119 52.381 0.00 0.00 45.44 5.52
581 600 5.050490 ACAGCCGTGCTAGATAAGTTTATG 58.950 41.667 0.00 0.00 36.40 1.90
594 621 4.663636 AAGTTTATGTACGCTGACAAGC 57.336 40.909 0.00 0.00 46.66 4.01
758 791 5.441709 TTTAGATGGAAAAACACGGGAAC 57.558 39.130 0.00 0.00 0.00 3.62
794 827 0.034896 CGGAGATTATTCCCCCGTGG 59.965 60.000 0.00 0.00 35.24 4.94
1011 1070 3.718210 GACGACCATGGAGCCCGTC 62.718 68.421 21.47 23.82 41.85 4.79
1012 1071 4.873129 CGACCATGGAGCCCGTCG 62.873 72.222 21.47 12.48 41.70 5.12
1013 1072 4.530857 GACCATGGAGCCCGTCGG 62.531 72.222 21.47 3.60 0.00 4.79
1359 1418 2.353803 CCCCGAGTTCAAGTTCTGGTAG 60.354 54.545 0.00 0.00 0.00 3.18
1360 1419 2.299297 CCCGAGTTCAAGTTCTGGTAGT 59.701 50.000 0.00 0.00 0.00 2.73
1361 1420 3.508793 CCCGAGTTCAAGTTCTGGTAGTA 59.491 47.826 0.00 0.00 0.00 1.82
1410 1470 0.909623 TCTCCGGTCCCCTTTGATTC 59.090 55.000 0.00 0.00 0.00 2.52
1450 1510 3.184783 GCTGAATTCGAGATCAGATGCAG 59.815 47.826 25.18 13.10 44.64 4.41
1630 1698 2.223829 CCAGCTCCTACGTTAGATGTGG 60.224 54.545 0.00 0.00 0.00 4.17
1701 1771 3.447742 CCACTTGCTGACAAAGTTTTCC 58.552 45.455 0.00 0.00 34.74 3.13
1747 1829 3.669251 ACTCTAGGTGAACTCTTGCAC 57.331 47.619 0.00 0.00 0.00 4.57
1750 1832 4.241681 CTCTAGGTGAACTCTTGCACTTC 58.758 47.826 0.00 0.00 35.43 3.01
1781 1863 1.226746 ACTTTTGTAGTGCAGCGACC 58.773 50.000 0.00 0.00 35.19 4.79
1814 1899 6.605849 CATATTCTGGAAAGGATATGTTGCG 58.394 40.000 6.02 0.00 0.00 4.85
1824 1910 5.099042 AGGATATGTTGCGTTTTCTAGGT 57.901 39.130 0.00 0.00 0.00 3.08
1825 1911 4.876107 AGGATATGTTGCGTTTTCTAGGTG 59.124 41.667 0.00 0.00 0.00 4.00
1835 1942 2.370281 TTTCTAGGTGAGCTCTTGCG 57.630 50.000 16.19 0.00 45.42 4.85
1843 1950 0.308684 TGAGCTCTTGCGCTTTTGTG 59.691 50.000 16.19 0.00 45.42 3.33
1858 1965 4.685924 CTTTTGTGCAAGTTCCATCTTGT 58.314 39.130 7.98 0.00 44.41 3.16
1870 1977 5.009010 AGTTCCATCTTGTTAACTGCTGTTG 59.991 40.000 18.22 2.18 37.59 3.33
1900 2007 3.740115 TGAAGAGCTGTTAACCTTCCAC 58.260 45.455 15.43 4.94 35.42 4.02
1909 2016 6.039382 AGCTGTTAACCTTCCACTTTGTAAAG 59.961 38.462 2.48 2.94 41.73 1.85
1962 2077 1.544691 TCTTTCGGTGGTAGTCTCAGC 59.455 52.381 0.00 0.00 0.00 4.26
2061 2178 0.524862 CTCTGCCGCATTGCTTTTCT 59.475 50.000 7.12 0.00 0.00 2.52
2064 2181 1.739466 CTGCCGCATTGCTTTTCTAGA 59.261 47.619 7.12 0.00 0.00 2.43
2065 2182 1.739466 TGCCGCATTGCTTTTCTAGAG 59.261 47.619 7.12 0.00 0.00 2.43
2093 2210 8.862325 TGTGATGTTCTTTCAGTGGTATTTAT 57.138 30.769 0.00 0.00 0.00 1.40
2120 2237 4.318332 CTGTTGTATGGTTCAGAAGCTCA 58.682 43.478 13.45 7.44 0.00 4.26
2129 2246 3.465871 GTTCAGAAGCTCAGATGGGATC 58.534 50.000 0.00 0.00 0.00 3.36
2131 2248 0.392336 AGAAGCTCAGATGGGATCGC 59.608 55.000 2.14 2.14 0.00 4.58
2160 2279 6.064717 ACAATCTCTTTCCAGTTACTTTGCT 58.935 36.000 0.00 0.00 0.00 3.91
2166 2285 2.479837 TCCAGTTACTTTGCTCACGTG 58.520 47.619 9.94 9.94 0.00 4.49
2167 2286 1.069906 CCAGTTACTTTGCTCACGTGC 60.070 52.381 11.67 0.00 0.00 5.34
2183 2302 4.921515 TCACGTGCTACAGATTAAGTTCAC 59.078 41.667 11.67 0.00 0.00 3.18
2184 2303 4.684242 CACGTGCTACAGATTAAGTTCACA 59.316 41.667 0.82 0.00 0.00 3.58
2226 2345 1.331214 CTTTTCCCCAGCAAGCTCAA 58.669 50.000 0.00 0.00 0.00 3.02
2229 2348 0.612732 TTCCCCAGCAAGCTCAATGG 60.613 55.000 4.46 4.46 0.00 3.16
2233 2352 1.067354 CCCAGCAAGCTCAATGGAAAC 60.067 52.381 11.55 0.00 34.60 2.78
2253 2372 6.350110 GGAAACATACATTAGCTGCTTTTGGA 60.350 38.462 7.79 2.92 0.00 3.53
2268 2387 4.466828 CTTTTGGAGCACATGAAGTAACG 58.533 43.478 0.00 0.00 0.00 3.18
2269 2388 2.831685 TGGAGCACATGAAGTAACGT 57.168 45.000 0.00 0.00 0.00 3.99
2340 2605 8.503196 GTTTGAAAAGATTTTGTTTTCTGGTGT 58.497 29.630 10.12 0.00 42.17 4.16
2351 2616 3.328382 TTTCTGGTGTCTATGGGTTCG 57.672 47.619 0.00 0.00 0.00 3.95
2352 2617 0.535335 TCTGGTGTCTATGGGTTCGC 59.465 55.000 0.00 0.00 0.00 4.70
2362 2627 3.733960 GGGTTCGCGGCCTTTGTC 61.734 66.667 17.48 0.66 0.00 3.18
2363 2628 3.733960 GGTTCGCGGCCTTTGTCC 61.734 66.667 6.13 0.00 0.00 4.02
2401 2666 4.566360 GTGCAGTGCAAATGTACAAAAACT 59.434 37.500 21.67 0.00 46.65 2.66
2421 2686 3.444388 ACTACACTAACCTACTGCTGCTC 59.556 47.826 0.00 0.00 0.00 4.26
2495 2760 5.414789 TCTTCTCGGTATTTGATGTTCCA 57.585 39.130 0.00 0.00 0.00 3.53
2626 2891 1.671850 GCAGGTACGAGTTTGCTGCTA 60.672 52.381 9.83 0.00 33.88 3.49
2646 2912 7.963465 GCTGCTAGTTGGAAGTTAATTAGTTTC 59.037 37.037 0.00 3.62 0.00 2.78
2672 2938 7.653767 TCAGCTGCTTTAAACTTAAGTAGAC 57.346 36.000 9.47 0.44 37.48 2.59
2712 2991 1.782044 CAAAGTTGTTTCCATGCCCG 58.218 50.000 0.00 0.00 0.00 6.13
2713 2992 0.678950 AAAGTTGTTTCCATGCCCGG 59.321 50.000 0.00 0.00 0.00 5.73
2726 3005 0.908910 TGCCCGGTCAGTCATTACAT 59.091 50.000 0.00 0.00 0.00 2.29
2787 3073 2.066262 CACTTGTACTACTTGGTGCCG 58.934 52.381 0.00 0.00 0.00 5.69
2823 3117 1.177401 GAACCCTGTGAATGCTTCCC 58.823 55.000 0.00 0.00 0.00 3.97
2831 3125 3.355378 TGTGAATGCTTCCCGATTGAAT 58.645 40.909 0.00 0.00 0.00 2.57
2876 3170 7.573968 GAGTAAACTATACTCCCTCCGTAAA 57.426 40.000 4.62 0.00 38.33 2.01
2877 3171 7.340122 AGTAAACTATACTCCCTCCGTAAAC 57.660 40.000 0.00 0.00 0.00 2.01
2878 3172 7.122048 AGTAAACTATACTCCCTCCGTAAACT 58.878 38.462 0.00 0.00 0.00 2.66
2879 3173 8.275040 AGTAAACTATACTCCCTCCGTAAACTA 58.725 37.037 0.00 0.00 0.00 2.24
2880 3174 7.961326 AAACTATACTCCCTCCGTAAACTAA 57.039 36.000 0.00 0.00 0.00 2.24
2881 3175 8.544687 AAACTATACTCCCTCCGTAAACTAAT 57.455 34.615 0.00 0.00 0.00 1.73
2882 3176 9.646522 AAACTATACTCCCTCCGTAAACTAATA 57.353 33.333 0.00 0.00 0.00 0.98
2883 3177 9.819754 AACTATACTCCCTCCGTAAACTAATAT 57.180 33.333 0.00 0.00 0.00 1.28
2888 3182 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2889 3183 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
2890 3184 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
2891 3185 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
2892 3186 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
2893 3187 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
2894 3188 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
2895 3189 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
2896 3190 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
2908 3202 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
2909 3203 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
2910 3204 7.828712 AGAGCGTTTAGATCACTACTTTAGTT 58.171 34.615 0.00 0.00 37.82 2.24
2911 3205 8.305317 AGAGCGTTTAGATCACTACTTTAGTTT 58.695 33.333 0.00 0.00 37.82 2.66
2912 3206 9.565213 GAGCGTTTAGATCACTACTTTAGTTTA 57.435 33.333 0.00 0.00 36.76 2.01
2913 3207 9.351570 AGCGTTTAGATCACTACTTTAGTTTAC 57.648 33.333 0.00 0.00 36.76 2.01
2914 3208 9.132521 GCGTTTAGATCACTACTTTAGTTTACA 57.867 33.333 0.00 0.00 36.76 2.41
2919 3213 8.068892 AGATCACTACTTTAGTTTACAGAGGG 57.931 38.462 0.00 0.00 36.76 4.30
2920 3214 7.894364 AGATCACTACTTTAGTTTACAGAGGGA 59.106 37.037 0.00 0.00 36.76 4.20
2921 3215 7.463961 TCACTACTTTAGTTTACAGAGGGAG 57.536 40.000 0.00 0.00 36.76 4.30
2922 3216 7.008941 TCACTACTTTAGTTTACAGAGGGAGT 58.991 38.462 0.00 0.00 36.76 3.85
2923 3217 8.166061 TCACTACTTTAGTTTACAGAGGGAGTA 58.834 37.037 0.00 0.00 36.76 2.59
2924 3218 8.968969 CACTACTTTAGTTTACAGAGGGAGTAT 58.031 37.037 0.00 0.00 36.76 2.12
2960 3254 6.670695 TCAGGAGCTAGCATGTCATTATTA 57.329 37.500 18.83 0.00 0.00 0.98
2961 3255 7.066307 TCAGGAGCTAGCATGTCATTATTAA 57.934 36.000 18.83 0.00 0.00 1.40
3016 3316 6.311200 CCATGGATTAGCAAGCTTTTTAACAC 59.689 38.462 5.56 0.00 0.00 3.32
3037 3337 3.328931 ACCATACCAGCATATTCTCCCTG 59.671 47.826 0.00 0.00 0.00 4.45
3042 3342 3.184628 CCAGCATATTCTCCCTGGGATA 58.815 50.000 17.51 6.25 40.86 2.59
3044 3344 4.141528 CCAGCATATTCTCCCTGGGATATC 60.142 50.000 17.51 6.13 40.86 1.63
3064 3364 5.613358 ATCCACTTCAAAAGTTAGCGAAG 57.387 39.130 0.00 0.00 40.46 3.79
3160 3461 4.598036 ACCAGTGGATCCAAAGATTGAT 57.402 40.909 18.20 0.00 30.90 2.57
3165 3466 1.677576 GGATCCAAAGATTGATGCGCA 59.322 47.619 14.96 14.96 30.90 6.09
3203 3505 2.568612 CTCTTCTGCGAGGCGACA 59.431 61.111 0.00 0.00 0.00 4.35
3218 3520 4.818642 AGGCGACAGATAATCAGATGATG 58.181 43.478 0.00 0.00 34.49 3.07
3279 3582 9.257651 GACAGTGAATGTACAAACTAGTAACTT 57.742 33.333 0.00 0.00 44.17 2.66
3336 3639 5.038651 AGATCAGTAGTAGCTTCCGTACT 57.961 43.478 0.00 0.00 34.96 2.73
3354 3657 5.329493 CGTACTCTGATCATTTGTCACGTA 58.671 41.667 0.00 0.00 0.00 3.57
3398 3701 2.543012 TGTGCAATGCAAATCAAAACCG 59.457 40.909 10.44 0.00 41.47 4.44
3445 3758 2.632537 ACCACCTACTCCATTTCCTGT 58.367 47.619 0.00 0.00 0.00 4.00
3636 3961 2.746277 AATGTTGGTCGCGCTCCC 60.746 61.111 5.56 5.43 0.00 4.30
3637 3962 3.254024 AATGTTGGTCGCGCTCCCT 62.254 57.895 5.56 0.00 0.00 4.20
3685 4010 1.982073 GCCACGGCTCCTTTGATTCG 61.982 60.000 0.00 0.00 38.26 3.34
3697 4022 5.253330 TCCTTTGATTCGAAGGCATTTAGT 58.747 37.500 23.16 0.00 43.00 2.24
3710 4035 6.759497 AGGCATTTAGTAGAATTTGTGGAC 57.241 37.500 0.00 0.00 0.00 4.02
3724 4049 4.561500 TTGTGGACGATTTGGATCCTTA 57.438 40.909 14.23 0.59 33.34 2.69
3727 4052 4.224147 TGTGGACGATTTGGATCCTTAGAA 59.776 41.667 14.23 3.23 33.34 2.10
3728 4053 4.571176 GTGGACGATTTGGATCCTTAGAAC 59.429 45.833 14.23 0.00 33.34 3.01
3821 4148 5.649395 TGCACTCTATCTTGGAGGAAAATTG 59.351 40.000 0.00 0.00 35.34 2.32
3822 4149 5.067023 GCACTCTATCTTGGAGGAAAATTGG 59.933 44.000 0.00 0.00 35.34 3.16
3823 4150 6.183347 CACTCTATCTTGGAGGAAAATTGGT 58.817 40.000 0.00 0.00 35.34 3.67
3824 4151 6.094603 CACTCTATCTTGGAGGAAAATTGGTG 59.905 42.308 0.00 0.00 35.34 4.17
3825 4152 5.509498 TCTATCTTGGAGGAAAATTGGTGG 58.491 41.667 0.00 0.00 0.00 4.61
3826 4153 3.893753 TCTTGGAGGAAAATTGGTGGA 57.106 42.857 0.00 0.00 0.00 4.02
3827 4154 4.191804 TCTTGGAGGAAAATTGGTGGAA 57.808 40.909 0.00 0.00 0.00 3.53
3828 4155 4.750941 TCTTGGAGGAAAATTGGTGGAAT 58.249 39.130 0.00 0.00 0.00 3.01
3829 4156 5.154418 TCTTGGAGGAAAATTGGTGGAATT 58.846 37.500 0.00 0.00 35.65 2.17
3830 4157 5.606329 TCTTGGAGGAAAATTGGTGGAATTT 59.394 36.000 0.00 0.00 44.66 1.82
3831 4158 5.482163 TGGAGGAAAATTGGTGGAATTTC 57.518 39.130 0.00 0.00 42.41 2.17
3832 4159 5.154418 TGGAGGAAAATTGGTGGAATTTCT 58.846 37.500 0.00 0.00 42.41 2.52
3833 4160 5.606329 TGGAGGAAAATTGGTGGAATTTCTT 59.394 36.000 0.00 0.00 42.41 2.52
3834 4161 6.101005 TGGAGGAAAATTGGTGGAATTTCTTT 59.899 34.615 0.00 0.00 42.41 2.52
3835 4162 6.998074 GGAGGAAAATTGGTGGAATTTCTTTT 59.002 34.615 0.00 0.00 42.41 2.27
3836 4163 7.041167 GGAGGAAAATTGGTGGAATTTCTTTTG 60.041 37.037 0.00 0.00 42.41 2.44
3837 4164 6.262944 AGGAAAATTGGTGGAATTTCTTTTGC 59.737 34.615 0.00 0.59 42.41 3.68
3838 4165 6.262944 GGAAAATTGGTGGAATTTCTTTTGCT 59.737 34.615 0.00 0.00 42.41 3.91
3839 4166 7.201812 GGAAAATTGGTGGAATTTCTTTTGCTT 60.202 33.333 0.00 0.00 42.41 3.91
3840 4167 7.643569 AAATTGGTGGAATTTCTTTTGCTTT 57.356 28.000 0.00 0.00 39.65 3.51
3841 4168 7.643569 AATTGGTGGAATTTCTTTTGCTTTT 57.356 28.000 0.00 0.00 29.22 2.27
3842 4169 6.676237 TTGGTGGAATTTCTTTTGCTTTTC 57.324 33.333 0.00 0.00 0.00 2.29
3843 4170 5.122519 TGGTGGAATTTCTTTTGCTTTTCC 58.877 37.500 0.00 0.00 34.54 3.13
3844 4171 4.515191 GGTGGAATTTCTTTTGCTTTTCCC 59.485 41.667 0.00 0.00 33.30 3.97
3845 4172 4.211164 GTGGAATTTCTTTTGCTTTTCCCG 59.789 41.667 0.00 0.00 33.30 5.14
3846 4173 4.141824 TGGAATTTCTTTTGCTTTTCCCGT 60.142 37.500 0.00 0.00 33.30 5.28
3847 4174 4.211164 GGAATTTCTTTTGCTTTTCCCGTG 59.789 41.667 0.00 0.00 0.00 4.94
3848 4175 2.217429 TTCTTTTGCTTTTCCCGTGC 57.783 45.000 0.00 0.00 0.00 5.34
3849 4176 1.398692 TCTTTTGCTTTTCCCGTGCT 58.601 45.000 0.00 0.00 0.00 4.40
3850 4177 2.577700 TCTTTTGCTTTTCCCGTGCTA 58.422 42.857 0.00 0.00 0.00 3.49
3851 4178 3.153919 TCTTTTGCTTTTCCCGTGCTAT 58.846 40.909 0.00 0.00 0.00 2.97
3852 4179 3.190535 TCTTTTGCTTTTCCCGTGCTATC 59.809 43.478 0.00 0.00 0.00 2.08
3853 4180 2.192664 TTGCTTTTCCCGTGCTATCA 57.807 45.000 0.00 0.00 0.00 2.15
3854 4181 2.192664 TGCTTTTCCCGTGCTATCAA 57.807 45.000 0.00 0.00 0.00 2.57
3855 4182 2.509569 TGCTTTTCCCGTGCTATCAAA 58.490 42.857 0.00 0.00 0.00 2.69
3856 4183 2.227865 TGCTTTTCCCGTGCTATCAAAC 59.772 45.455 0.00 0.00 0.00 2.93
3857 4184 2.227865 GCTTTTCCCGTGCTATCAAACA 59.772 45.455 0.00 0.00 0.00 2.83
3858 4185 3.305064 GCTTTTCCCGTGCTATCAAACAA 60.305 43.478 0.00 0.00 0.00 2.83
3859 4186 4.618227 GCTTTTCCCGTGCTATCAAACAAT 60.618 41.667 0.00 0.00 0.00 2.71
3860 4187 4.433186 TTTCCCGTGCTATCAAACAATG 57.567 40.909 0.00 0.00 0.00 2.82
3861 4188 2.364632 TCCCGTGCTATCAAACAATGG 58.635 47.619 0.00 0.00 0.00 3.16
3862 4189 2.091541 CCCGTGCTATCAAACAATGGT 58.908 47.619 0.00 0.00 0.00 3.55
3863 4190 2.491693 CCCGTGCTATCAAACAATGGTT 59.508 45.455 0.00 0.00 39.43 3.67
3865 4192 4.156922 CCCGTGCTATCAAACAATGGTTTA 59.843 41.667 0.00 0.00 45.18 2.01
3866 4193 5.163561 CCCGTGCTATCAAACAATGGTTTAT 60.164 40.000 0.00 0.00 45.18 1.40
3867 4194 5.971202 CCGTGCTATCAAACAATGGTTTATC 59.029 40.000 0.00 0.00 45.18 1.75
3868 4195 6.183360 CCGTGCTATCAAACAATGGTTTATCT 60.183 38.462 0.00 0.00 45.18 1.98
3869 4196 6.688385 CGTGCTATCAAACAATGGTTTATCTG 59.312 38.462 0.00 0.00 45.18 2.90
3870 4197 7.413988 CGTGCTATCAAACAATGGTTTATCTGA 60.414 37.037 0.00 0.00 45.18 3.27
3871 4198 8.243426 GTGCTATCAAACAATGGTTTATCTGAA 58.757 33.333 0.00 0.00 45.18 3.02
3872 4199 8.970020 TGCTATCAAACAATGGTTTATCTGAAT 58.030 29.630 0.00 0.00 45.18 2.57
3873 4200 9.807649 GCTATCAAACAATGGTTTATCTGAATT 57.192 29.630 0.00 0.00 45.18 2.17
3877 4204 9.642327 TCAAACAATGGTTTATCTGAATTCATG 57.358 29.630 8.96 2.80 45.18 3.07
3878 4205 9.426837 CAAACAATGGTTTATCTGAATTCATGT 57.573 29.630 8.96 3.45 45.18 3.21
3881 4208 9.466497 ACAATGGTTTATCTGAATTCATGTAGT 57.534 29.630 8.96 0.00 0.00 2.73
3900 4227 9.620660 CATGTAGTTTTGTAATTTTGTACTCCC 57.379 33.333 0.00 0.00 0.00 4.30
3901 4228 8.983702 TGTAGTTTTGTAATTTTGTACTCCCT 57.016 30.769 0.00 0.00 0.00 4.20
3902 4229 9.059260 TGTAGTTTTGTAATTTTGTACTCCCTC 57.941 33.333 0.00 0.00 0.00 4.30
3903 4230 7.520451 AGTTTTGTAATTTTGTACTCCCTCC 57.480 36.000 0.00 0.00 0.00 4.30
3904 4231 6.206048 AGTTTTGTAATTTTGTACTCCCTCCG 59.794 38.462 0.00 0.00 0.00 4.63
3905 4232 4.895668 TGTAATTTTGTACTCCCTCCGT 57.104 40.909 0.00 0.00 0.00 4.69
3906 4233 5.231702 TGTAATTTTGTACTCCCTCCGTT 57.768 39.130 0.00 0.00 0.00 4.44
3907 4234 5.240121 TGTAATTTTGTACTCCCTCCGTTC 58.760 41.667 0.00 0.00 0.00 3.95
3908 4235 2.845363 TTTTGTACTCCCTCCGTTCC 57.155 50.000 0.00 0.00 0.00 3.62
3909 4236 0.978907 TTTGTACTCCCTCCGTTCCC 59.021 55.000 0.00 0.00 0.00 3.97
3910 4237 0.178926 TTGTACTCCCTCCGTTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
3911 4238 0.178926 TGTACTCCCTCCGTTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
3912 4239 0.978907 GTACTCCCTCCGTTCCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
3913 4240 1.558294 GTACTCCCTCCGTTCCCAAAT 59.442 52.381 0.00 0.00 0.00 2.32
3914 4241 0.328258 ACTCCCTCCGTTCCCAAATG 59.672 55.000 0.00 0.00 0.00 2.32
3915 4242 0.328258 CTCCCTCCGTTCCCAAATGT 59.672 55.000 0.00 0.00 0.00 2.71
3916 4243 1.557832 CTCCCTCCGTTCCCAAATGTA 59.442 52.381 0.00 0.00 0.00 2.29
3917 4244 1.986631 TCCCTCCGTTCCCAAATGTAA 59.013 47.619 0.00 0.00 0.00 2.41
3918 4245 2.026636 TCCCTCCGTTCCCAAATGTAAG 60.027 50.000 0.00 0.00 0.00 2.34
3919 4246 2.290705 CCCTCCGTTCCCAAATGTAAGT 60.291 50.000 0.00 0.00 0.00 2.24
3920 4247 3.007635 CCTCCGTTCCCAAATGTAAGTC 58.992 50.000 0.00 0.00 0.00 3.01
3921 4248 3.307480 CCTCCGTTCCCAAATGTAAGTCT 60.307 47.826 0.00 0.00 0.00 3.24
3922 4249 4.324267 CTCCGTTCCCAAATGTAAGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
3923 4250 4.721132 TCCGTTCCCAAATGTAAGTCTTT 58.279 39.130 0.00 0.00 0.00 2.52
3924 4251 5.134661 TCCGTTCCCAAATGTAAGTCTTTT 58.865 37.500 0.00 0.00 0.00 2.27
3925 4252 5.595133 TCCGTTCCCAAATGTAAGTCTTTTT 59.405 36.000 0.00 0.00 0.00 1.94
3926 4253 6.771749 TCCGTTCCCAAATGTAAGTCTTTTTA 59.228 34.615 0.00 0.00 0.00 1.52
3927 4254 7.040961 TCCGTTCCCAAATGTAAGTCTTTTTAG 60.041 37.037 0.00 0.00 0.00 1.85
3928 4255 7.040961 CCGTTCCCAAATGTAAGTCTTTTTAGA 60.041 37.037 0.00 0.00 0.00 2.10
3929 4256 8.015658 CGTTCCCAAATGTAAGTCTTTTTAGAG 58.984 37.037 0.00 0.00 0.00 2.43
3930 4257 9.063615 GTTCCCAAATGTAAGTCTTTTTAGAGA 57.936 33.333 0.00 0.00 0.00 3.10
3931 4258 9.807921 TTCCCAAATGTAAGTCTTTTTAGAGAT 57.192 29.630 0.00 0.00 0.00 2.75
3932 4259 9.807921 TCCCAAATGTAAGTCTTTTTAGAGATT 57.192 29.630 0.00 0.00 0.00 2.40
3943 4270 9.396022 AGTCTTTTTAGAGATTTCAACAAGTGA 57.604 29.630 0.00 0.00 0.00 3.41
3944 4271 9.439537 GTCTTTTTAGAGATTTCAACAAGTGAC 57.560 33.333 0.00 0.00 35.39 3.67
3945 4272 9.396022 TCTTTTTAGAGATTTCAACAAGTGACT 57.604 29.630 0.00 0.00 35.39 3.41
3948 4275 9.607988 TTTTAGAGATTTCAACAAGTGACTACA 57.392 29.630 0.00 0.00 35.39 2.74
3949 4276 9.778741 TTTAGAGATTTCAACAAGTGACTACAT 57.221 29.630 0.00 0.00 35.39 2.29
3951 4278 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
3952 4279 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
3953 4280 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
3954 4281 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
3955 4282 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
3956 4283 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
3957 4284 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
3958 4285 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
3959 4286 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
3960 4287 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
3961 4288 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
3962 4289 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
3963 4290 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
3964 4291 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
3965 4292 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
3966 4293 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
3967 4294 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
3968 4295 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
3969 4296 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3970 4297 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3971 4298 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
3972 4299 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
3973 4300 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
3974 4301 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
3975 4302 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
4000 4327 9.371136 ACTATAAAATATGTCTACATGCATCCG 57.629 33.333 0.00 0.00 37.15 4.18
4001 4328 9.371136 CTATAAAATATGTCTACATGCATCCGT 57.629 33.333 0.00 0.00 37.15 4.69
4003 4330 9.890629 ATAAAATATGTCTACATGCATCCGTAT 57.109 29.630 0.00 0.00 37.15 3.06
4004 4331 7.601073 AAATATGTCTACATGCATCCGTATG 57.399 36.000 0.00 0.00 40.73 2.39
4006 4333 4.400529 TGTCTACATGCATCCGTATGTT 57.599 40.909 0.00 0.00 44.98 2.71
4007 4334 4.119136 TGTCTACATGCATCCGTATGTTG 58.881 43.478 0.00 0.85 44.98 3.33
4008 4335 4.119862 GTCTACATGCATCCGTATGTTGT 58.880 43.478 0.00 0.00 44.98 3.32
4009 4336 5.163499 TGTCTACATGCATCCGTATGTTGTA 60.163 40.000 0.00 0.00 44.98 2.41
4010 4337 5.402568 GTCTACATGCATCCGTATGTTGTAG 59.597 44.000 18.50 18.50 44.98 2.74
4011 4338 4.137116 ACATGCATCCGTATGTTGTAGT 57.863 40.909 0.00 0.00 44.98 2.73
4012 4339 4.119862 ACATGCATCCGTATGTTGTAGTC 58.880 43.478 0.00 0.00 44.98 2.59
4013 4340 3.173668 TGCATCCGTATGTTGTAGTCC 57.826 47.619 0.00 0.00 35.38 3.85
4014 4341 2.498078 TGCATCCGTATGTTGTAGTCCA 59.502 45.455 0.00 0.00 35.38 4.02
4015 4342 3.133901 TGCATCCGTATGTTGTAGTCCAT 59.866 43.478 0.00 0.00 35.38 3.41
4016 4343 4.127171 GCATCCGTATGTTGTAGTCCATT 58.873 43.478 0.00 0.00 35.38 3.16
4017 4344 4.574828 GCATCCGTATGTTGTAGTCCATTT 59.425 41.667 0.00 0.00 35.38 2.32
4018 4345 5.277345 GCATCCGTATGTTGTAGTCCATTTC 60.277 44.000 0.00 0.00 35.38 2.17
4019 4346 5.408880 TCCGTATGTTGTAGTCCATTTCA 57.591 39.130 0.00 0.00 0.00 2.69
4020 4347 5.795972 TCCGTATGTTGTAGTCCATTTCAA 58.204 37.500 0.00 0.00 0.00 2.69
4021 4348 6.231951 TCCGTATGTTGTAGTCCATTTCAAA 58.768 36.000 0.00 0.00 0.00 2.69
4022 4349 6.882140 TCCGTATGTTGTAGTCCATTTCAAAT 59.118 34.615 0.00 0.00 0.00 2.32
4023 4350 6.966632 CCGTATGTTGTAGTCCATTTCAAATG 59.033 38.462 2.80 2.80 0.00 2.32
4024 4351 7.361713 CCGTATGTTGTAGTCCATTTCAAATGT 60.362 37.037 9.31 0.00 0.00 2.71
4025 4352 7.692291 CGTATGTTGTAGTCCATTTCAAATGTC 59.308 37.037 9.31 2.44 0.00 3.06
4026 4353 7.765695 ATGTTGTAGTCCATTTCAAATGTCT 57.234 32.000 9.31 9.22 0.00 3.41
4027 4354 8.862325 ATGTTGTAGTCCATTTCAAATGTCTA 57.138 30.769 9.31 8.35 0.00 2.59
4028 4355 8.684386 TGTTGTAGTCCATTTCAAATGTCTAA 57.316 30.769 9.31 0.00 0.00 2.10
4029 4356 9.126151 TGTTGTAGTCCATTTCAAATGTCTAAA 57.874 29.630 9.31 4.37 0.00 1.85
4030 4357 9.959749 GTTGTAGTCCATTTCAAATGTCTAAAA 57.040 29.630 9.31 9.35 0.00 1.52
4035 4362 9.136323 AGTCCATTTCAAATGTCTAAAAAGACT 57.864 29.630 9.31 8.53 39.41 3.24
4036 4363 9.750125 GTCCATTTCAAATGTCTAAAAAGACTT 57.250 29.630 9.31 0.00 39.41 3.01
4037 4364 9.748708 TCCATTTCAAATGTCTAAAAAGACTTG 57.251 29.630 9.31 4.63 39.41 3.16
4038 4365 9.533253 CCATTTCAAATGTCTAAAAAGACTTGT 57.467 29.630 9.31 0.00 39.41 3.16
4050 4377 9.211485 TCTAAAAAGACTTGTATTTAGGAACGG 57.789 33.333 13.94 0.00 36.48 4.44
4051 4378 9.211485 CTAAAAAGACTTGTATTTAGGAACGGA 57.789 33.333 8.91 0.00 33.69 4.69
4052 4379 8.454570 AAAAAGACTTGTATTTAGGAACGGAA 57.545 30.769 0.00 0.00 0.00 4.30
4053 4380 7.668525 AAAGACTTGTATTTAGGAACGGAAG 57.331 36.000 0.00 0.00 0.00 3.46
4054 4381 5.731591 AGACTTGTATTTAGGAACGGAAGG 58.268 41.667 0.00 0.00 0.00 3.46
4055 4382 5.482878 AGACTTGTATTTAGGAACGGAAGGA 59.517 40.000 0.00 0.00 0.00 3.36
4056 4383 5.731591 ACTTGTATTTAGGAACGGAAGGAG 58.268 41.667 0.00 0.00 0.00 3.69
4057 4384 5.247792 ACTTGTATTTAGGAACGGAAGGAGT 59.752 40.000 0.00 0.00 0.00 3.85
4058 4385 6.438425 ACTTGTATTTAGGAACGGAAGGAGTA 59.562 38.462 0.00 0.00 0.00 2.59
4059 4386 6.461110 TGTATTTAGGAACGGAAGGAGTAG 57.539 41.667 0.00 0.00 0.00 2.57
4060 4387 5.361857 TGTATTTAGGAACGGAAGGAGTAGG 59.638 44.000 0.00 0.00 0.00 3.18
4061 4388 3.744940 TTAGGAACGGAAGGAGTAGGA 57.255 47.619 0.00 0.00 0.00 2.94
4062 4389 2.850695 AGGAACGGAAGGAGTAGGAT 57.149 50.000 0.00 0.00 0.00 3.24
4063 4390 3.117552 AGGAACGGAAGGAGTAGGATT 57.882 47.619 0.00 0.00 0.00 3.01
4064 4391 4.261411 AGGAACGGAAGGAGTAGGATTA 57.739 45.455 0.00 0.00 0.00 1.75
4065 4392 4.617593 AGGAACGGAAGGAGTAGGATTAA 58.382 43.478 0.00 0.00 0.00 1.40
4066 4393 5.028131 AGGAACGGAAGGAGTAGGATTAAA 58.972 41.667 0.00 0.00 0.00 1.52
4067 4394 5.128991 AGGAACGGAAGGAGTAGGATTAAAG 59.871 44.000 0.00 0.00 0.00 1.85
4068 4395 5.128335 GGAACGGAAGGAGTAGGATTAAAGA 59.872 44.000 0.00 0.00 0.00 2.52
4069 4396 5.855740 ACGGAAGGAGTAGGATTAAAGAG 57.144 43.478 0.00 0.00 0.00 2.85
4070 4397 4.650131 ACGGAAGGAGTAGGATTAAAGAGG 59.350 45.833 0.00 0.00 0.00 3.69
4071 4398 4.894114 CGGAAGGAGTAGGATTAAAGAGGA 59.106 45.833 0.00 0.00 0.00 3.71
4072 4399 5.221283 CGGAAGGAGTAGGATTAAAGAGGAC 60.221 48.000 0.00 0.00 0.00 3.85
4073 4400 5.661759 GGAAGGAGTAGGATTAAAGAGGACA 59.338 44.000 0.00 0.00 0.00 4.02
4074 4401 6.407187 GGAAGGAGTAGGATTAAAGAGGACAC 60.407 46.154 0.00 0.00 0.00 3.67
4075 4402 4.645588 AGGAGTAGGATTAAAGAGGACACG 59.354 45.833 0.00 0.00 0.00 4.49
4076 4403 4.202131 GGAGTAGGATTAAAGAGGACACGG 60.202 50.000 0.00 0.00 0.00 4.94
4077 4404 2.693267 AGGATTAAAGAGGACACGGC 57.307 50.000 0.00 0.00 0.00 5.68
4078 4405 1.906574 AGGATTAAAGAGGACACGGCA 59.093 47.619 0.00 0.00 0.00 5.69
4079 4406 2.007608 GGATTAAAGAGGACACGGCAC 58.992 52.381 0.00 0.00 0.00 5.01
4080 4407 2.354805 GGATTAAAGAGGACACGGCACT 60.355 50.000 0.00 0.00 0.00 4.40
4081 4408 2.450609 TTAAAGAGGACACGGCACTC 57.549 50.000 0.00 0.00 0.00 3.51
4082 4409 1.629043 TAAAGAGGACACGGCACTCT 58.371 50.000 0.00 0.00 43.03 3.24
4083 4410 1.629043 AAAGAGGACACGGCACTCTA 58.371 50.000 0.00 0.00 40.49 2.43
4084 4411 1.629043 AAGAGGACACGGCACTCTAA 58.371 50.000 0.00 0.00 40.49 2.10
4085 4412 0.889306 AGAGGACACGGCACTCTAAC 59.111 55.000 0.00 0.00 39.65 2.34
4086 4413 0.108756 GAGGACACGGCACTCTAACC 60.109 60.000 0.00 0.00 0.00 2.85
4087 4414 1.079336 GGACACGGCACTCTAACCC 60.079 63.158 0.00 0.00 0.00 4.11
4088 4415 1.542187 GGACACGGCACTCTAACCCT 61.542 60.000 0.00 0.00 0.00 4.34
4089 4416 1.180029 GACACGGCACTCTAACCCTA 58.820 55.000 0.00 0.00 0.00 3.53
4090 4417 0.893447 ACACGGCACTCTAACCCTAC 59.107 55.000 0.00 0.00 0.00 3.18
4091 4418 1.183549 CACGGCACTCTAACCCTACT 58.816 55.000 0.00 0.00 0.00 2.57
4092 4419 1.549170 CACGGCACTCTAACCCTACTT 59.451 52.381 0.00 0.00 0.00 2.24
4093 4420 2.028385 CACGGCACTCTAACCCTACTTT 60.028 50.000 0.00 0.00 0.00 2.66
4094 4421 2.636403 ACGGCACTCTAACCCTACTTTT 59.364 45.455 0.00 0.00 0.00 2.27
4095 4422 3.072038 ACGGCACTCTAACCCTACTTTTT 59.928 43.478 0.00 0.00 0.00 1.94
4117 4444 8.824159 TTTTTCTTGTTCATGTGTTTTTGAGA 57.176 26.923 0.00 0.00 0.00 3.27
4118 4445 8.824159 TTTTCTTGTTCATGTGTTTTTGAGAA 57.176 26.923 0.00 0.00 0.00 2.87
4119 4446 9.434420 TTTTCTTGTTCATGTGTTTTTGAGAAT 57.566 25.926 0.00 0.00 0.00 2.40
4120 4447 9.434420 TTTCTTGTTCATGTGTTTTTGAGAATT 57.566 25.926 0.00 0.00 0.00 2.17
4121 4448 9.434420 TTCTTGTTCATGTGTTTTTGAGAATTT 57.566 25.926 0.00 0.00 0.00 1.82
4122 4449 9.434420 TCTTGTTCATGTGTTTTTGAGAATTTT 57.566 25.926 0.00 0.00 0.00 1.82
4139 4466 1.627864 TTTTTGGAGCAAGTAGGCCC 58.372 50.000 0.00 0.00 0.00 5.80
4140 4467 0.251608 TTTTGGAGCAAGTAGGCCCC 60.252 55.000 0.00 0.00 31.29 5.80
4141 4468 1.140134 TTTGGAGCAAGTAGGCCCCT 61.140 55.000 0.00 0.00 32.04 4.79
4142 4469 0.252974 TTGGAGCAAGTAGGCCCCTA 60.253 55.000 0.00 0.00 32.04 3.53
4143 4470 0.981277 TGGAGCAAGTAGGCCCCTAC 60.981 60.000 15.16 15.16 46.70 3.18
4152 4479 3.823281 GTAGGCCCCTACTCTCTTTTC 57.177 52.381 15.57 0.00 43.92 2.29
4153 4480 2.651642 AGGCCCCTACTCTCTTTTCT 57.348 50.000 0.00 0.00 0.00 2.52
4154 4481 2.922564 AGGCCCCTACTCTCTTTTCTT 58.077 47.619 0.00 0.00 0.00 2.52
4155 4482 2.841266 AGGCCCCTACTCTCTTTTCTTC 59.159 50.000 0.00 0.00 0.00 2.87
4156 4483 2.092861 GGCCCCTACTCTCTTTTCTTCC 60.093 54.545 0.00 0.00 0.00 3.46
4157 4484 2.841266 GCCCCTACTCTCTTTTCTTCCT 59.159 50.000 0.00 0.00 0.00 3.36
4158 4485 3.118555 GCCCCTACTCTCTTTTCTTCCTC 60.119 52.174 0.00 0.00 0.00 3.71
4159 4486 4.097418 CCCCTACTCTCTTTTCTTCCTCA 58.903 47.826 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 3.953612 TCTTTCGGGGATGAATGAAATGG 59.046 43.478 0.00 0.00 31.44 3.16
36 37 5.581126 TTCTTTCGGGGATGAATGAAATG 57.419 39.130 3.29 0.00 38.38 2.32
63 64 5.127519 CCAAGATGAACTGGAATGGCATTAA 59.872 40.000 13.65 3.80 0.00 1.40
76 77 4.081752 CAGAGCTCACTACCAAGATGAACT 60.082 45.833 17.77 0.00 0.00 3.01
151 165 1.735360 GCAAGGTGCAGCAAACAGA 59.265 52.632 19.63 0.00 44.26 3.41
183 197 2.514205 ACCACAATGCTTTGCTTGTC 57.486 45.000 11.96 0.00 36.22 3.18
190 204 0.386731 GCGCGTTACCACAATGCTTT 60.387 50.000 8.43 0.00 0.00 3.51
191 205 1.209127 GCGCGTTACCACAATGCTT 59.791 52.632 8.43 0.00 0.00 3.91
192 206 1.671054 AGCGCGTTACCACAATGCT 60.671 52.632 8.43 0.00 0.00 3.79
193 207 1.511887 CAGCGCGTTACCACAATGC 60.512 57.895 8.43 0.00 0.00 3.56
194 208 0.237235 AACAGCGCGTTACCACAATG 59.763 50.000 8.43 0.45 35.52 2.82
206 220 1.226773 GGAATGGCATGAACAGCGC 60.227 57.895 0.00 0.00 0.00 5.92
292 307 1.140407 CGCATTCGTCTCGGAACTCC 61.140 60.000 0.00 0.00 0.00 3.85
493 511 0.809385 TGTCGTCGTCTCCATCTTCC 59.191 55.000 0.00 0.00 0.00 3.46
496 514 1.751437 TCATGTCGTCGTCTCCATCT 58.249 50.000 0.00 0.00 0.00 2.90
508 526 7.111179 CGATGCTAGAAATCAAAAATCATGTCG 59.889 37.037 0.00 0.00 0.00 4.35
564 582 6.916387 TCAGCGTACATAAACTTATCTAGCAC 59.084 38.462 0.00 0.00 0.00 4.40
594 621 1.014564 GGGAGAAGGAAGCAACGACG 61.015 60.000 0.00 0.00 0.00 5.12
758 791 1.004277 TCCGTGGAATTTCTGGGAAGG 59.996 52.381 0.00 0.00 0.00 3.46
926 967 4.678743 GTGGGGTGGGCTGGGTTC 62.679 72.222 0.00 0.00 0.00 3.62
956 1008 1.543690 GGATTTCTGGGGGATGGGG 59.456 63.158 0.00 0.00 0.00 4.96
1359 1418 4.502962 GGCAGCAGAAGAGATGGATATAC 58.497 47.826 0.00 0.00 0.00 1.47
1360 1419 3.517100 GGGCAGCAGAAGAGATGGATATA 59.483 47.826 0.00 0.00 0.00 0.86
1361 1420 2.305343 GGGCAGCAGAAGAGATGGATAT 59.695 50.000 0.00 0.00 0.00 1.63
1410 1470 0.984109 GCACCAATTTCACGCAATCG 59.016 50.000 0.00 0.00 42.43 3.34
1450 1510 1.104630 CTGGGTCTCGAGAAGGGTAC 58.895 60.000 18.55 3.70 0.00 3.34
1630 1698 3.552068 GCAGGTCAACAAAATGGGTGTAC 60.552 47.826 0.00 0.00 0.00 2.90
1726 1796 4.408276 AGTGCAAGAGTTCACCTAGAGTA 58.592 43.478 0.00 0.00 33.90 2.59
1727 1805 3.235200 AGTGCAAGAGTTCACCTAGAGT 58.765 45.455 0.00 0.00 33.90 3.24
1747 1829 6.974622 ACTACAAAAGTTCAATTGCACAGAAG 59.025 34.615 10.86 0.96 33.35 2.85
1750 1832 5.051508 GCACTACAAAAGTTCAATTGCACAG 60.052 40.000 10.86 0.83 35.76 3.66
1781 1863 6.122277 TCCTTTCCAGAATATGCAACCTTAG 58.878 40.000 0.00 0.00 0.00 2.18
1814 1899 2.413453 CGCAAGAGCTCACCTAGAAAAC 59.587 50.000 17.77 0.00 43.02 2.43
1835 1942 3.375782 AGATGGAACTTGCACAAAAGC 57.624 42.857 0.00 0.00 0.00 3.51
1843 1950 9.752362 AACAGCAGTTAACAAGATGGAACTTGC 62.752 40.741 16.98 9.64 42.13 4.01
1858 1965 2.656947 AGGGAAGCAACAGCAGTTAA 57.343 45.000 0.00 0.00 35.85 2.01
1900 2007 9.639601 AACAAGGAGTTCTTTTTCTTTACAAAG 57.360 29.630 0.00 0.00 34.74 2.77
1909 2016 9.237846 CAATGACTTAACAAGGAGTTCTTTTTC 57.762 33.333 0.00 0.00 41.64 2.29
1962 2077 3.436704 ACTTCTGAACCATGCATACAACG 59.563 43.478 0.00 0.00 0.00 4.10
2061 2178 6.875726 CCACTGAAAGAACATCACAATCTCTA 59.124 38.462 0.00 0.00 37.43 2.43
2064 2181 5.380043 ACCACTGAAAGAACATCACAATCT 58.620 37.500 0.00 0.00 37.43 2.40
2065 2182 5.695851 ACCACTGAAAGAACATCACAATC 57.304 39.130 0.00 0.00 37.43 2.67
2093 2210 4.350368 TCTGAACCATACAACAGCAGAA 57.650 40.909 0.00 0.00 0.00 3.02
2120 2237 0.904649 TTGTCTGTGCGATCCCATCT 59.095 50.000 0.00 0.00 0.00 2.90
2129 2246 2.414481 CTGGAAAGAGATTGTCTGTGCG 59.586 50.000 0.00 0.00 33.40 5.34
2131 2248 6.226787 AGTAACTGGAAAGAGATTGTCTGTG 58.773 40.000 0.00 0.00 34.84 3.66
2160 2279 4.921515 GTGAACTTAATCTGTAGCACGTGA 59.078 41.667 22.23 0.00 0.00 4.35
2166 2285 6.073003 AGCAGTTTGTGAACTTAATCTGTAGC 60.073 38.462 0.00 0.00 43.48 3.58
2167 2286 7.426929 AGCAGTTTGTGAACTTAATCTGTAG 57.573 36.000 0.00 0.00 43.48 2.74
2226 2345 6.780457 AAAGCAGCTAATGTATGTTTCCAT 57.220 33.333 0.00 0.00 34.97 3.41
2229 2348 6.620678 TCCAAAAGCAGCTAATGTATGTTTC 58.379 36.000 0.00 0.00 0.00 2.78
2290 2463 4.718961 AGTGCCTATTCCATACCATCAAC 58.281 43.478 0.00 0.00 0.00 3.18
2291 2464 5.606749 ACTAGTGCCTATTCCATACCATCAA 59.393 40.000 0.00 0.00 0.00 2.57
2298 2561 8.325787 TCTTTTCAAACTAGTGCCTATTCCATA 58.674 33.333 0.00 0.00 0.00 2.74
2340 2605 1.906105 AAAGGCCGCGAACCCATAGA 61.906 55.000 8.23 0.00 0.00 1.98
2362 2627 0.443869 GCACACAGCATAACAGACGG 59.556 55.000 0.00 0.00 44.79 4.79
2363 2628 3.955429 GCACACAGCATAACAGACG 57.045 52.632 0.00 0.00 44.79 4.18
2401 2666 3.698289 AGAGCAGCAGTAGGTTAGTGTA 58.302 45.455 0.00 0.00 0.00 2.90
2421 2686 5.389859 TTTGTGATGGCATACCTGAAAAG 57.610 39.130 0.00 0.00 36.63 2.27
2495 2760 4.404073 CAGAGTAGTATTGGCCAGAAGACT 59.596 45.833 5.11 7.84 32.30 3.24
2626 2891 8.568794 GCTGAAGAAACTAATTAACTTCCAACT 58.431 33.333 0.00 0.00 36.96 3.16
2646 2912 8.224437 GTCTACTTAAGTTTAAAGCAGCTGAAG 58.776 37.037 20.43 10.29 0.00 3.02
2726 3005 6.448207 TCAATGATCAATCGGCATTAAACA 57.552 33.333 0.00 0.00 31.54 2.83
2787 3073 3.526534 GGTTCTATTCTGACTGCCTCAC 58.473 50.000 0.00 0.00 0.00 3.51
2831 3125 9.581289 TTACTCCAGATCAAAGTAAATGGAAAA 57.419 29.630 10.44 1.56 36.45 2.29
2864 3158 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
2865 3159 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
2866 3160 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
2867 3161 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
2868 3162 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
2869 3163 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
2870 3164 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
2882 3176 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
2883 3177 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
2884 3178 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
2885 3179 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
2886 3180 8.463456 AAACTAAAGTAGTGATCTAAACGCTC 57.537 34.615 0.00 0.00 39.39 5.03
2887 3181 9.351570 GTAAACTAAAGTAGTGATCTAAACGCT 57.648 33.333 0.00 0.00 39.39 5.07
2888 3182 9.132521 TGTAAACTAAAGTAGTGATCTAAACGC 57.867 33.333 0.00 0.00 39.39 4.84
2893 3187 9.186837 CCCTCTGTAAACTAAAGTAGTGATCTA 57.813 37.037 0.00 0.00 39.39 1.98
2894 3188 7.894364 TCCCTCTGTAAACTAAAGTAGTGATCT 59.106 37.037 0.00 0.00 39.39 2.75
2895 3189 8.064336 TCCCTCTGTAAACTAAAGTAGTGATC 57.936 38.462 0.00 0.00 39.39 2.92
2896 3190 7.674772 ACTCCCTCTGTAAACTAAAGTAGTGAT 59.325 37.037 0.00 0.00 39.39 3.06
2897 3191 7.008941 ACTCCCTCTGTAAACTAAAGTAGTGA 58.991 38.462 0.00 0.00 39.39 3.41
2898 3192 7.229581 ACTCCCTCTGTAAACTAAAGTAGTG 57.770 40.000 0.00 0.00 39.39 2.74
2902 3196 9.490083 ACATATACTCCCTCTGTAAACTAAAGT 57.510 33.333 0.00 0.00 0.00 2.66
2907 3201 8.925338 CCTAAACATATACTCCCTCTGTAAACT 58.075 37.037 0.00 0.00 0.00 2.66
2908 3202 8.921205 TCCTAAACATATACTCCCTCTGTAAAC 58.079 37.037 0.00 0.00 0.00 2.01
2909 3203 9.144298 CTCCTAAACATATACTCCCTCTGTAAA 57.856 37.037 0.00 0.00 0.00 2.01
2910 3204 7.232941 GCTCCTAAACATATACTCCCTCTGTAA 59.767 40.741 0.00 0.00 0.00 2.41
2911 3205 6.720288 GCTCCTAAACATATACTCCCTCTGTA 59.280 42.308 0.00 0.00 0.00 2.74
2912 3206 5.540719 GCTCCTAAACATATACTCCCTCTGT 59.459 44.000 0.00 0.00 0.00 3.41
2913 3207 5.777732 AGCTCCTAAACATATACTCCCTCTG 59.222 44.000 0.00 0.00 0.00 3.35
2914 3208 5.971493 AGCTCCTAAACATATACTCCCTCT 58.029 41.667 0.00 0.00 0.00 3.69
2915 3209 5.775701 TGAGCTCCTAAACATATACTCCCTC 59.224 44.000 12.15 0.00 0.00 4.30
2916 3210 5.716979 TGAGCTCCTAAACATATACTCCCT 58.283 41.667 12.15 0.00 0.00 4.20
2917 3211 5.046950 CCTGAGCTCCTAAACATATACTCCC 60.047 48.000 12.15 0.00 0.00 4.30
2918 3212 5.775701 TCCTGAGCTCCTAAACATATACTCC 59.224 44.000 12.15 0.00 0.00 3.85
2919 3213 6.902771 TCCTGAGCTCCTAAACATATACTC 57.097 41.667 12.15 0.00 0.00 2.59
2920 3214 6.909550 CTCCTGAGCTCCTAAACATATACT 57.090 41.667 12.15 0.00 0.00 2.12
2960 3254 8.963725 CCAATATAATGCATCATATGACCAGTT 58.036 33.333 7.78 4.26 0.00 3.16
2961 3255 8.111545 ACCAATATAATGCATCATATGACCAGT 58.888 33.333 7.78 10.07 0.00 4.00
3016 3316 3.307975 CCAGGGAGAATATGCTGGTATGG 60.308 52.174 0.00 0.00 0.00 2.74
3037 3337 5.007724 CGCTAACTTTTGAAGTGGATATCCC 59.992 44.000 19.34 10.37 41.91 3.85
3042 3342 5.063880 ACTTCGCTAACTTTTGAAGTGGAT 58.936 37.500 5.73 0.00 46.69 3.41
3044 3344 4.813296 ACTTCGCTAACTTTTGAAGTGG 57.187 40.909 5.73 0.00 46.69 4.00
3064 3364 8.828688 AGATTAGTAAGCCGAAATATGGTAAC 57.171 34.615 0.00 0.00 0.00 2.50
3160 3461 2.417257 GGGATTTGGCATCTGCGCA 61.417 57.895 10.98 10.98 43.26 6.09
3165 3466 1.679944 CGACACAGGGATTTGGCATCT 60.680 52.381 0.00 0.00 0.00 2.90
3203 3505 4.806625 GCCAGCACCATCATCTGATTATCT 60.807 45.833 0.00 0.00 31.21 1.98
3218 3520 1.757423 AAAACCACCATGCCAGCACC 61.757 55.000 0.00 0.00 0.00 5.01
3279 3582 5.600484 ACAAGGTATCACCAACCAATGAAAA 59.400 36.000 0.00 0.00 41.95 2.29
3336 3639 6.398095 ACAGAATACGTGACAAATGATCAGA 58.602 36.000 0.09 0.00 0.00 3.27
3354 3657 6.265649 ACACTCTCACAGTACTACAACAGAAT 59.734 38.462 0.00 0.00 32.21 2.40
3398 3701 0.249911 AGAGTTGCACGAGTCCCAAC 60.250 55.000 0.00 7.52 39.20 3.77
3513 3827 9.507280 AATCTGAACTTTGCATATATTTGAACG 57.493 29.630 0.00 0.00 0.00 3.95
3566 3889 5.586643 GTCTAGTATTGGGCCTCAAGAAAAG 59.413 44.000 4.53 4.26 38.95 2.27
3636 3961 4.508461 TCCATGAAATCACTTTGCACAG 57.492 40.909 0.00 0.00 0.00 3.66
3637 3962 4.523558 TCATCCATGAAATCACTTTGCACA 59.476 37.500 0.00 0.00 33.08 4.57
3685 4010 7.251281 GTCCACAAATTCTACTAAATGCCTTC 58.749 38.462 0.00 0.00 0.00 3.46
3697 4022 5.588648 GGATCCAAATCGTCCACAAATTCTA 59.411 40.000 6.95 0.00 32.24 2.10
3710 4035 5.297029 GGGAAAGTTCTAAGGATCCAAATCG 59.703 44.000 15.82 0.00 32.24 3.34
3724 4049 3.326880 ACGACCAACATAGGGAAAGTTCT 59.673 43.478 0.00 0.00 0.00 3.01
3727 4052 3.782656 AACGACCAACATAGGGAAAGT 57.217 42.857 0.00 0.00 0.00 2.66
3728 4053 6.373216 TCAAATAACGACCAACATAGGGAAAG 59.627 38.462 0.00 0.00 0.00 2.62
3780 4106 5.474876 AGAGTGCAAAAGAATCCCAAGTAAG 59.525 40.000 0.00 0.00 0.00 2.34
3821 4148 4.515191 GGGAAAAGCAAAAGAAATTCCACC 59.485 41.667 4.90 0.00 38.42 4.61
3822 4149 4.211164 CGGGAAAAGCAAAAGAAATTCCAC 59.789 41.667 4.90 0.00 38.42 4.02
3823 4150 4.141824 ACGGGAAAAGCAAAAGAAATTCCA 60.142 37.500 4.90 0.00 38.42 3.53
3824 4151 4.211164 CACGGGAAAAGCAAAAGAAATTCC 59.789 41.667 0.00 0.00 36.45 3.01
3825 4152 4.318760 GCACGGGAAAAGCAAAAGAAATTC 60.319 41.667 0.00 0.00 0.00 2.17
3826 4153 3.559655 GCACGGGAAAAGCAAAAGAAATT 59.440 39.130 0.00 0.00 0.00 1.82
3827 4154 3.130633 GCACGGGAAAAGCAAAAGAAAT 58.869 40.909 0.00 0.00 0.00 2.17
3828 4155 2.167487 AGCACGGGAAAAGCAAAAGAAA 59.833 40.909 0.00 0.00 0.00 2.52
3829 4156 1.754226 AGCACGGGAAAAGCAAAAGAA 59.246 42.857 0.00 0.00 0.00 2.52
3830 4157 1.398692 AGCACGGGAAAAGCAAAAGA 58.601 45.000 0.00 0.00 0.00 2.52
3831 4158 3.057596 TGATAGCACGGGAAAAGCAAAAG 60.058 43.478 0.00 0.00 0.00 2.27
3832 4159 2.887783 TGATAGCACGGGAAAAGCAAAA 59.112 40.909 0.00 0.00 0.00 2.44
3833 4160 2.509569 TGATAGCACGGGAAAAGCAAA 58.490 42.857 0.00 0.00 0.00 3.68
3834 4161 2.192664 TGATAGCACGGGAAAAGCAA 57.807 45.000 0.00 0.00 0.00 3.91
3835 4162 2.192664 TTGATAGCACGGGAAAAGCA 57.807 45.000 0.00 0.00 0.00 3.91
3836 4163 2.227865 TGTTTGATAGCACGGGAAAAGC 59.772 45.455 0.00 0.00 0.00 3.51
3837 4164 4.497473 TTGTTTGATAGCACGGGAAAAG 57.503 40.909 0.00 0.00 0.00 2.27
3838 4165 4.321601 CCATTGTTTGATAGCACGGGAAAA 60.322 41.667 0.00 0.00 0.00 2.29
3839 4166 3.192422 CCATTGTTTGATAGCACGGGAAA 59.808 43.478 0.00 0.00 0.00 3.13
3840 4167 2.752354 CCATTGTTTGATAGCACGGGAA 59.248 45.455 0.00 0.00 0.00 3.97
3841 4168 2.290641 ACCATTGTTTGATAGCACGGGA 60.291 45.455 0.00 0.00 0.00 5.14
3842 4169 2.091541 ACCATTGTTTGATAGCACGGG 58.908 47.619 0.00 0.00 0.00 5.28
3843 4170 3.848272 AACCATTGTTTGATAGCACGG 57.152 42.857 0.00 0.00 0.00 4.94
3844 4171 6.688385 CAGATAAACCATTGTTTGATAGCACG 59.312 38.462 5.21 0.00 44.27 5.34
3845 4172 7.761409 TCAGATAAACCATTGTTTGATAGCAC 58.239 34.615 5.21 0.00 44.27 4.40
3846 4173 7.936496 TCAGATAAACCATTGTTTGATAGCA 57.064 32.000 5.21 0.00 44.27 3.49
3847 4174 9.807649 AATTCAGATAAACCATTGTTTGATAGC 57.192 29.630 5.21 0.00 44.27 2.97
3851 4178 9.642327 CATGAATTCAGATAAACCATTGTTTGA 57.358 29.630 14.54 0.00 44.27 2.69
3852 4179 9.426837 ACATGAATTCAGATAAACCATTGTTTG 57.573 29.630 14.54 3.89 44.27 2.93
3855 4182 9.466497 ACTACATGAATTCAGATAAACCATTGT 57.534 29.630 14.54 11.03 0.00 2.71
3874 4201 9.620660 GGGAGTACAAAATTACAAAACTACATG 57.379 33.333 0.00 0.00 0.00 3.21
3875 4202 9.582648 AGGGAGTACAAAATTACAAAACTACAT 57.417 29.630 0.00 0.00 0.00 2.29
3876 4203 8.983702 AGGGAGTACAAAATTACAAAACTACA 57.016 30.769 0.00 0.00 0.00 2.74
3877 4204 8.509690 GGAGGGAGTACAAAATTACAAAACTAC 58.490 37.037 0.00 0.00 0.00 2.73
3878 4205 7.388500 CGGAGGGAGTACAAAATTACAAAACTA 59.612 37.037 0.00 0.00 0.00 2.24
3879 4206 6.206048 CGGAGGGAGTACAAAATTACAAAACT 59.794 38.462 0.00 0.00 0.00 2.66
3880 4207 6.016860 ACGGAGGGAGTACAAAATTACAAAAC 60.017 38.462 0.00 0.00 0.00 2.43
3881 4208 6.063404 ACGGAGGGAGTACAAAATTACAAAA 58.937 36.000 0.00 0.00 0.00 2.44
3882 4209 5.623169 ACGGAGGGAGTACAAAATTACAAA 58.377 37.500 0.00 0.00 0.00 2.83
3883 4210 5.231702 ACGGAGGGAGTACAAAATTACAA 57.768 39.130 0.00 0.00 0.00 2.41
3884 4211 4.895668 ACGGAGGGAGTACAAAATTACA 57.104 40.909 0.00 0.00 0.00 2.41
3885 4212 4.633126 GGAACGGAGGGAGTACAAAATTAC 59.367 45.833 0.00 0.00 0.00 1.89
3886 4213 4.323715 GGGAACGGAGGGAGTACAAAATTA 60.324 45.833 0.00 0.00 0.00 1.40
3887 4214 3.560668 GGGAACGGAGGGAGTACAAAATT 60.561 47.826 0.00 0.00 0.00 1.82
3888 4215 2.026542 GGGAACGGAGGGAGTACAAAAT 60.027 50.000 0.00 0.00 0.00 1.82
3889 4216 1.348696 GGGAACGGAGGGAGTACAAAA 59.651 52.381 0.00 0.00 0.00 2.44
3890 4217 0.978907 GGGAACGGAGGGAGTACAAA 59.021 55.000 0.00 0.00 0.00 2.83
3891 4218 0.178926 TGGGAACGGAGGGAGTACAA 60.179 55.000 0.00 0.00 0.00 2.41
3892 4219 0.178926 TTGGGAACGGAGGGAGTACA 60.179 55.000 0.00 0.00 0.00 2.90
3893 4220 0.978907 TTTGGGAACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
3894 4221 1.557832 CATTTGGGAACGGAGGGAGTA 59.442 52.381 0.00 0.00 0.00 2.59
3895 4222 0.328258 CATTTGGGAACGGAGGGAGT 59.672 55.000 0.00 0.00 0.00 3.85
3896 4223 0.328258 ACATTTGGGAACGGAGGGAG 59.672 55.000 0.00 0.00 0.00 4.30
3897 4224 1.659022 TACATTTGGGAACGGAGGGA 58.341 50.000 0.00 0.00 0.00 4.20
3898 4225 2.290705 ACTTACATTTGGGAACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
3899 4226 3.007635 GACTTACATTTGGGAACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3900 4227 3.939066 AGACTTACATTTGGGAACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
3901 4228 4.360951 AAGACTTACATTTGGGAACGGA 57.639 40.909 0.00 0.00 0.00 4.69
3902 4229 5.447624 AAAAGACTTACATTTGGGAACGG 57.552 39.130 0.00 0.00 0.00 4.44
3903 4230 7.867752 TCTAAAAAGACTTACATTTGGGAACG 58.132 34.615 0.00 0.00 0.00 3.95
3904 4231 9.063615 TCTCTAAAAAGACTTACATTTGGGAAC 57.936 33.333 0.00 0.00 0.00 3.62
3905 4232 9.807921 ATCTCTAAAAAGACTTACATTTGGGAA 57.192 29.630 0.00 0.00 0.00 3.97
3906 4233 9.807921 AATCTCTAAAAAGACTTACATTTGGGA 57.192 29.630 0.00 0.00 0.00 4.37
3917 4244 9.396022 TCACTTGTTGAAATCTCTAAAAAGACT 57.604 29.630 0.00 0.00 0.00 3.24
3918 4245 9.439537 GTCACTTGTTGAAATCTCTAAAAAGAC 57.560 33.333 0.00 0.00 35.39 3.01
3919 4246 9.396022 AGTCACTTGTTGAAATCTCTAAAAAGA 57.604 29.630 0.00 0.00 35.39 2.52
3922 4249 9.607988 TGTAGTCACTTGTTGAAATCTCTAAAA 57.392 29.630 0.00 0.00 35.39 1.52
3923 4250 9.778741 ATGTAGTCACTTGTTGAAATCTCTAAA 57.221 29.630 0.00 0.00 35.39 1.85
3925 4252 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
3926 4253 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
3927 4254 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
3928 4255 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
3929 4256 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
3930 4257 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
3931 4258 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
3932 4259 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
3933 4260 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
3934 4261 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
3935 4262 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
3936 4263 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
3937 4264 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
3938 4265 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
3939 4266 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
3940 4267 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
3941 4268 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
3942 4269 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
3943 4270 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
3944 4271 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
3945 4272 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
3946 4273 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3947 4274 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
3948 4275 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
3949 4276 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
3950 4277 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
3951 4278 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
3952 4279 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3953 4280 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3954 4281 9.890629 TTATAGTGTAGATTCACTCATTTTGCT 57.109 29.630 2.59 0.00 45.79 3.91
3974 4301 9.371136 CGGATGCATGTAGACATATTTTATAGT 57.629 33.333 2.46 0.00 34.26 2.12
3975 4302 9.371136 ACGGATGCATGTAGACATATTTTATAG 57.629 33.333 2.46 0.00 34.26 1.31
3977 4304 9.890629 ATACGGATGCATGTAGACATATTTTAT 57.109 29.630 2.46 0.00 34.26 1.40
3978 4305 9.150348 CATACGGATGCATGTAGACATATTTTA 57.850 33.333 2.46 0.00 34.26 1.52
3979 4306 7.661437 ACATACGGATGCATGTAGACATATTTT 59.339 33.333 7.78 0.00 36.43 1.82
3980 4307 7.161404 ACATACGGATGCATGTAGACATATTT 58.839 34.615 7.78 0.00 36.43 1.40
3981 4308 6.701340 ACATACGGATGCATGTAGACATATT 58.299 36.000 7.78 0.00 36.43 1.28
3982 4309 6.286240 ACATACGGATGCATGTAGACATAT 57.714 37.500 7.78 0.00 36.43 1.78
3983 4310 5.722021 ACATACGGATGCATGTAGACATA 57.278 39.130 7.78 0.00 36.43 2.29
3984 4311 4.607293 ACATACGGATGCATGTAGACAT 57.393 40.909 7.78 0.00 36.43 3.06
3985 4312 4.119136 CAACATACGGATGCATGTAGACA 58.881 43.478 7.78 0.00 36.43 3.41
3986 4313 4.119862 ACAACATACGGATGCATGTAGAC 58.880 43.478 15.89 0.00 35.66 2.59
3987 4314 4.400529 ACAACATACGGATGCATGTAGA 57.599 40.909 15.89 0.00 35.66 2.59
3988 4315 5.829233 CTACAACATACGGATGCATGTAG 57.171 43.478 26.90 26.90 43.29 2.74
3989 4316 5.270893 ACTACAACATACGGATGCATGTA 57.729 39.130 19.97 19.97 37.51 2.29
3990 4317 4.119862 GACTACAACATACGGATGCATGT 58.880 43.478 19.89 19.89 38.92 3.21
3991 4318 3.494626 GGACTACAACATACGGATGCATG 59.505 47.826 7.78 9.99 36.43 4.06
3992 4319 3.133901 TGGACTACAACATACGGATGCAT 59.866 43.478 7.78 0.00 36.43 3.96
3993 4320 2.498078 TGGACTACAACATACGGATGCA 59.502 45.455 7.78 0.00 36.43 3.96
3994 4321 3.173668 TGGACTACAACATACGGATGC 57.826 47.619 7.78 0.00 36.43 3.91
3995 4322 5.815222 TGAAATGGACTACAACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
3996 4323 5.984725 TGAAATGGACTACAACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
3997 4324 5.408880 TGAAATGGACTACAACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
3998 4325 6.489127 TTTGAAATGGACTACAACATACGG 57.511 37.500 0.00 0.00 0.00 4.02
3999 4326 7.526608 ACATTTGAAATGGACTACAACATACG 58.473 34.615 20.69 0.00 0.00 3.06
4000 4327 8.730680 AGACATTTGAAATGGACTACAACATAC 58.269 33.333 20.69 0.00 0.00 2.39
4001 4328 8.862325 AGACATTTGAAATGGACTACAACATA 57.138 30.769 20.69 0.00 0.00 2.29
4002 4329 7.765695 AGACATTTGAAATGGACTACAACAT 57.234 32.000 20.69 0.00 0.00 2.71
4003 4330 8.684386 TTAGACATTTGAAATGGACTACAACA 57.316 30.769 20.69 7.35 0.00 3.33
4004 4331 9.959749 TTTTAGACATTTGAAATGGACTACAAC 57.040 29.630 20.69 3.63 0.00 3.32
4009 4336 9.136323 AGTCTTTTTAGACATTTGAAATGGACT 57.864 29.630 20.69 19.24 41.02 3.85
4010 4337 9.750125 AAGTCTTTTTAGACATTTGAAATGGAC 57.250 29.630 20.69 14.60 41.02 4.02
4011 4338 9.748708 CAAGTCTTTTTAGACATTTGAAATGGA 57.251 29.630 20.69 4.35 41.02 3.41
4012 4339 9.533253 ACAAGTCTTTTTAGACATTTGAAATGG 57.467 29.630 20.69 4.64 41.02 3.16
4024 4351 9.211485 CCGTTCCTAAATACAAGTCTTTTTAGA 57.789 33.333 13.43 2.40 34.90 2.10
4025 4352 9.211485 TCCGTTCCTAAATACAAGTCTTTTTAG 57.789 33.333 7.75 7.75 33.47 1.85
4026 4353 9.558396 TTCCGTTCCTAAATACAAGTCTTTTTA 57.442 29.630 0.00 0.00 0.00 1.52
4027 4354 8.454570 TTCCGTTCCTAAATACAAGTCTTTTT 57.545 30.769 0.00 0.00 0.00 1.94
4028 4355 7.174426 CCTTCCGTTCCTAAATACAAGTCTTTT 59.826 37.037 0.00 0.00 0.00 2.27
4029 4356 6.653740 CCTTCCGTTCCTAAATACAAGTCTTT 59.346 38.462 0.00 0.00 0.00 2.52
4030 4357 6.013984 TCCTTCCGTTCCTAAATACAAGTCTT 60.014 38.462 0.00 0.00 0.00 3.01
4031 4358 5.482878 TCCTTCCGTTCCTAAATACAAGTCT 59.517 40.000 0.00 0.00 0.00 3.24
4032 4359 5.727434 TCCTTCCGTTCCTAAATACAAGTC 58.273 41.667 0.00 0.00 0.00 3.01
4033 4360 5.247792 ACTCCTTCCGTTCCTAAATACAAGT 59.752 40.000 0.00 0.00 0.00 3.16
4034 4361 5.731591 ACTCCTTCCGTTCCTAAATACAAG 58.268 41.667 0.00 0.00 0.00 3.16
4035 4362 5.750352 ACTCCTTCCGTTCCTAAATACAA 57.250 39.130 0.00 0.00 0.00 2.41
4036 4363 5.361857 CCTACTCCTTCCGTTCCTAAATACA 59.638 44.000 0.00 0.00 0.00 2.29
4037 4364 5.595952 TCCTACTCCTTCCGTTCCTAAATAC 59.404 44.000 0.00 0.00 0.00 1.89
4038 4365 5.769835 TCCTACTCCTTCCGTTCCTAAATA 58.230 41.667 0.00 0.00 0.00 1.40
4039 4366 4.617593 TCCTACTCCTTCCGTTCCTAAAT 58.382 43.478 0.00 0.00 0.00 1.40
4040 4367 4.051661 TCCTACTCCTTCCGTTCCTAAA 57.948 45.455 0.00 0.00 0.00 1.85
4041 4368 3.744940 TCCTACTCCTTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
4042 4369 3.967467 ATCCTACTCCTTCCGTTCCTA 57.033 47.619 0.00 0.00 0.00 2.94
4043 4370 2.850695 ATCCTACTCCTTCCGTTCCT 57.149 50.000 0.00 0.00 0.00 3.36
4044 4371 5.128335 TCTTTAATCCTACTCCTTCCGTTCC 59.872 44.000 0.00 0.00 0.00 3.62
4045 4372 6.218108 TCTTTAATCCTACTCCTTCCGTTC 57.782 41.667 0.00 0.00 0.00 3.95
4046 4373 5.128991 CCTCTTTAATCCTACTCCTTCCGTT 59.871 44.000 0.00 0.00 0.00 4.44
4047 4374 4.650131 CCTCTTTAATCCTACTCCTTCCGT 59.350 45.833 0.00 0.00 0.00 4.69
4048 4375 4.894114 TCCTCTTTAATCCTACTCCTTCCG 59.106 45.833 0.00 0.00 0.00 4.30
4049 4376 5.661759 TGTCCTCTTTAATCCTACTCCTTCC 59.338 44.000 0.00 0.00 0.00 3.46
4050 4377 6.575267 GTGTCCTCTTTAATCCTACTCCTTC 58.425 44.000 0.00 0.00 0.00 3.46
4051 4378 5.127356 CGTGTCCTCTTTAATCCTACTCCTT 59.873 44.000 0.00 0.00 0.00 3.36
4052 4379 4.645588 CGTGTCCTCTTTAATCCTACTCCT 59.354 45.833 0.00 0.00 0.00 3.69
4053 4380 4.202131 CCGTGTCCTCTTTAATCCTACTCC 60.202 50.000 0.00 0.00 0.00 3.85
4054 4381 4.737055 GCCGTGTCCTCTTTAATCCTACTC 60.737 50.000 0.00 0.00 0.00 2.59
4055 4382 3.132467 GCCGTGTCCTCTTTAATCCTACT 59.868 47.826 0.00 0.00 0.00 2.57
4056 4383 3.118884 TGCCGTGTCCTCTTTAATCCTAC 60.119 47.826 0.00 0.00 0.00 3.18
4057 4384 3.101437 TGCCGTGTCCTCTTTAATCCTA 58.899 45.455 0.00 0.00 0.00 2.94
4058 4385 1.906574 TGCCGTGTCCTCTTTAATCCT 59.093 47.619 0.00 0.00 0.00 3.24
4059 4386 2.007608 GTGCCGTGTCCTCTTTAATCC 58.992 52.381 0.00 0.00 0.00 3.01
4060 4387 2.930682 GAGTGCCGTGTCCTCTTTAATC 59.069 50.000 0.00 0.00 0.00 1.75
4061 4388 2.567615 AGAGTGCCGTGTCCTCTTTAAT 59.432 45.455 0.00 0.00 31.64 1.40
4062 4389 1.968493 AGAGTGCCGTGTCCTCTTTAA 59.032 47.619 0.00 0.00 31.64 1.52
4063 4390 1.629043 AGAGTGCCGTGTCCTCTTTA 58.371 50.000 0.00 0.00 31.64 1.85
4064 4391 1.629043 TAGAGTGCCGTGTCCTCTTT 58.371 50.000 0.00 0.00 36.90 2.52
4065 4392 1.272769 GTTAGAGTGCCGTGTCCTCTT 59.727 52.381 0.00 0.00 36.90 2.85
4066 4393 0.889306 GTTAGAGTGCCGTGTCCTCT 59.111 55.000 0.00 0.00 38.94 3.69
4067 4394 0.108756 GGTTAGAGTGCCGTGTCCTC 60.109 60.000 0.00 0.00 0.00 3.71
4068 4395 1.542187 GGGTTAGAGTGCCGTGTCCT 61.542 60.000 0.00 0.00 0.00 3.85
4069 4396 1.079336 GGGTTAGAGTGCCGTGTCC 60.079 63.158 0.00 0.00 0.00 4.02
4070 4397 1.135170 GTAGGGTTAGAGTGCCGTGTC 60.135 57.143 0.00 0.00 0.00 3.67
4071 4398 0.893447 GTAGGGTTAGAGTGCCGTGT 59.107 55.000 0.00 0.00 0.00 4.49
4072 4399 1.183549 AGTAGGGTTAGAGTGCCGTG 58.816 55.000 0.00 0.00 0.00 4.94
4073 4400 1.934410 AAGTAGGGTTAGAGTGCCGT 58.066 50.000 0.00 0.00 0.00 5.68
4074 4401 3.329929 AAAAGTAGGGTTAGAGTGCCG 57.670 47.619 0.00 0.00 0.00 5.69
4092 4419 8.824159 TCTCAAAAACACATGAACAAGAAAAA 57.176 26.923 0.00 0.00 0.00 1.94
4093 4420 8.824159 TTCTCAAAAACACATGAACAAGAAAA 57.176 26.923 0.00 0.00 0.00 2.29
4094 4421 9.434420 AATTCTCAAAAACACATGAACAAGAAA 57.566 25.926 0.00 0.00 0.00 2.52
4095 4422 9.434420 AAATTCTCAAAAACACATGAACAAGAA 57.566 25.926 0.00 0.00 0.00 2.52
4096 4423 9.434420 AAAATTCTCAAAAACACATGAACAAGA 57.566 25.926 0.00 0.00 0.00 3.02
4120 4447 1.627864 GGGCCTACTTGCTCCAAAAA 58.372 50.000 0.84 0.00 0.00 1.94
4121 4448 3.356814 GGGCCTACTTGCTCCAAAA 57.643 52.632 0.84 0.00 0.00 2.44
4132 4459 3.376636 AGAAAAGAGAGTAGGGGCCTAC 58.623 50.000 0.84 0.00 46.70 3.18
4133 4460 3.778622 AGAAAAGAGAGTAGGGGCCTA 57.221 47.619 0.84 0.00 0.00 3.93
4134 4461 2.651642 AGAAAAGAGAGTAGGGGCCT 57.348 50.000 0.84 0.00 0.00 5.19
4135 4462 2.092861 GGAAGAAAAGAGAGTAGGGGCC 60.093 54.545 0.00 0.00 0.00 5.80
4136 4463 2.841266 AGGAAGAAAAGAGAGTAGGGGC 59.159 50.000 0.00 0.00 0.00 5.80
4137 4464 4.097418 TGAGGAAGAAAAGAGAGTAGGGG 58.903 47.826 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.