Multiple sequence alignment - TraesCS7D01G400800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G400800 chr7D 100.000 7357 0 0 1 7357 518052078 518044722 0.000000e+00 13586.0
1 TraesCS7D01G400800 chr7D 82.872 397 59 7 376 769 271502253 271501863 1.520000e-91 348.0
2 TraesCS7D01G400800 chr7A 95.123 3158 123 15 3713 6860 592918752 592915616 0.000000e+00 4950.0
3 TraesCS7D01G400800 chr7A 95.428 1531 64 5 1716 3244 592921100 592919574 0.000000e+00 2435.0
4 TraesCS7D01G400800 chr7A 94.482 888 28 11 805 1685 592921971 592921098 0.000000e+00 1349.0
5 TraesCS7D01G400800 chr7A 97.363 493 9 2 3226 3715 592919398 592918907 0.000000e+00 835.0
6 TraesCS7D01G400800 chr7A 85.859 495 49 7 6864 7346 592915421 592914936 2.370000e-139 507.0
7 TraesCS7D01G400800 chr7A 82.587 402 55 12 376 773 303097267 303096877 2.540000e-89 340.0
8 TraesCS7D01G400800 chr7A 85.833 240 25 8 1 239 592922735 592922504 5.700000e-61 246.0
9 TraesCS7D01G400800 chr7B 93.716 2769 107 30 2205 4961 551065709 551062996 0.000000e+00 4087.0
10 TraesCS7D01G400800 chr7B 91.383 1764 104 24 4959 6691 551062363 551060617 0.000000e+00 2372.0
11 TraesCS7D01G400800 chr7B 93.108 711 24 5 805 1495 551067935 551067230 0.000000e+00 1018.0
12 TraesCS7D01G400800 chr7B 88.184 347 26 5 1560 1905 551067226 551066894 4.140000e-107 399.0
13 TraesCS7D01G400800 chr7B 92.937 269 12 2 1947 2209 551066707 551066440 1.160000e-102 385.0
14 TraesCS7D01G400800 chr7B 82.090 402 62 8 376 773 268509629 268510024 1.180000e-87 335.0
15 TraesCS7D01G400800 chr7B 81.401 414 64 11 377 786 327460198 327459794 7.120000e-85 326.0
16 TraesCS7D01G400800 chr7B 81.538 195 15 9 97 280 551458676 551458492 2.770000e-29 141.0
17 TraesCS7D01G400800 chr3B 96.099 974 32 3 2121 3094 589653224 589652257 0.000000e+00 1583.0
18 TraesCS7D01G400800 chr6D 85.258 407 52 6 375 776 461709606 461710009 5.310000e-111 412.0
19 TraesCS7D01G400800 chr1B 84.080 402 57 6 377 774 186803370 186803768 1.500000e-101 381.0
20 TraesCS7D01G400800 chr4B 83.750 400 56 8 375 770 391542474 391542868 3.240000e-98 370.0
21 TraesCS7D01G400800 chr2B 82.620 397 60 7 382 774 373994199 373994590 7.070000e-90 342.0
22 TraesCS7D01G400800 chr5B 82.412 398 61 7 380 773 467027078 467026686 9.140000e-89 339.0
23 TraesCS7D01G400800 chr4A 80.702 114 21 1 6988 7100 710229687 710229574 3.660000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G400800 chr7D 518044722 518052078 7356 True 13586.000000 13586 100.0000 1 7357 1 chr7D.!!$R2 7356
1 TraesCS7D01G400800 chr7A 592914936 592922735 7799 True 1720.333333 4950 92.3480 1 7346 6 chr7A.!!$R2 7345
2 TraesCS7D01G400800 chr7B 551060617 551067935 7318 True 1652.200000 4087 91.8656 805 6691 5 chr7B.!!$R3 5886
3 TraesCS7D01G400800 chr3B 589652257 589653224 967 True 1583.000000 1583 96.0990 2121 3094 1 chr3B.!!$R1 973

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
381 728 0.030195 TGGGCATGTATCAGGGGAGA 60.030 55.0 0.00 0.0 0.00 3.71 F
1506 1893 0.035439 GGGGGATCGCTTTCTGTTGA 60.035 55.0 9.90 0.0 0.00 3.18 F
2988 4268 0.537188 GGAGTAGGCACTAGCTTGCA 59.463 55.0 12.28 0.0 44.14 4.08 F
3263 4736 0.094730 GATCGTTTTCAAGGCGTCCG 59.905 55.0 0.00 0.0 0.00 4.79 F
4824 6461 0.165944 GAATGACCACGAGGCAAACG 59.834 55.0 0.00 0.0 39.06 3.60 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2322 3600 0.620556 CCTATGCACAACCCCACTCT 59.379 55.0 0.00 0.0 0.00 3.24 R
3263 4736 1.298859 CCACTCAAGCACCGCCTTAC 61.299 60.0 0.00 0.0 0.00 2.34 R
3855 5490 0.249531 TGCACGCGGTTAGAAGACAA 60.250 50.0 12.47 0.0 0.00 3.18 R
5014 7287 0.180171 CTGACCCATATTGCCCGACA 59.820 55.0 0.00 0.0 0.00 4.35 R
6799 9104 0.178992 ACAGCAGGCACCAAAGCTTA 60.179 50.0 0.00 0.0 34.61 3.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.387445 CGGCGCCGATGAAGTTTCA 61.387 57.895 44.86 0.00 42.83 2.69
24 25 2.223144 CGCCGATGAAGTTTCACTTTGA 59.777 45.455 0.00 0.00 38.80 2.69
158 159 3.623703 TGATGCACACAATCTAGCCAAT 58.376 40.909 0.00 0.00 0.00 3.16
159 160 4.779696 TGATGCACACAATCTAGCCAATA 58.220 39.130 0.00 0.00 0.00 1.90
160 161 4.576053 TGATGCACACAATCTAGCCAATAC 59.424 41.667 0.00 0.00 0.00 1.89
161 162 4.220693 TGCACACAATCTAGCCAATACT 57.779 40.909 0.00 0.00 0.00 2.12
162 163 4.191544 TGCACACAATCTAGCCAATACTC 58.808 43.478 0.00 0.00 0.00 2.59
163 164 4.080919 TGCACACAATCTAGCCAATACTCT 60.081 41.667 0.00 0.00 0.00 3.24
164 165 4.509600 GCACACAATCTAGCCAATACTCTC 59.490 45.833 0.00 0.00 0.00 3.20
165 166 5.683509 GCACACAATCTAGCCAATACTCTCT 60.684 44.000 0.00 0.00 0.00 3.10
174 175 4.718961 AGCCAATACTCTCTCTCTCTCTC 58.281 47.826 0.00 0.00 0.00 3.20
175 176 3.821033 GCCAATACTCTCTCTCTCTCTCC 59.179 52.174 0.00 0.00 0.00 3.71
201 202 2.110213 GGGTCGTCACTTGTGGCA 59.890 61.111 6.18 0.00 0.00 4.92
209 210 2.604914 CGTCACTTGTGGCATATCTCAC 59.395 50.000 6.18 0.00 34.71 3.51
216 217 1.421268 GTGGCATATCTCACCCCATGA 59.579 52.381 0.00 0.00 35.45 3.07
219 220 1.271597 GCATATCTCACCCCATGACCC 60.272 57.143 0.00 0.00 32.37 4.46
221 222 1.806496 TATCTCACCCCATGACCCAG 58.194 55.000 0.00 0.00 32.37 4.45
231 232 1.212688 CCATGACCCAGCTTGTATCCA 59.787 52.381 0.00 0.00 0.00 3.41
247 592 7.917505 GCTTGTATCCATCTAAATGTCCAAAAG 59.082 37.037 0.00 0.00 0.00 2.27
251 596 7.830099 ATCCATCTAAATGTCCAAAAGGATC 57.170 36.000 0.00 0.00 0.00 3.36
254 599 7.840716 TCCATCTAAATGTCCAAAAGGATCAAT 59.159 33.333 0.00 0.00 0.00 2.57
271 616 4.126520 TCAATAAAGTTTTGGCTCCCCT 57.873 40.909 0.00 0.00 0.00 4.79
274 619 2.001076 AAAGTTTTGGCTCCCCTCAG 57.999 50.000 0.00 0.00 0.00 3.35
276 621 1.149101 AGTTTTGGCTCCCCTCAGAA 58.851 50.000 0.00 0.00 0.00 3.02
277 622 1.499007 AGTTTTGGCTCCCCTCAGAAA 59.501 47.619 0.00 0.00 0.00 2.52
278 623 2.091333 AGTTTTGGCTCCCCTCAGAAAA 60.091 45.455 0.00 0.00 0.00 2.29
279 624 2.698274 GTTTTGGCTCCCCTCAGAAAAA 59.302 45.455 0.00 0.00 0.00 1.94
280 625 2.292828 TTGGCTCCCCTCAGAAAAAG 57.707 50.000 0.00 0.00 0.00 2.27
281 626 1.444933 TGGCTCCCCTCAGAAAAAGA 58.555 50.000 0.00 0.00 0.00 2.52
282 627 1.780309 TGGCTCCCCTCAGAAAAAGAA 59.220 47.619 0.00 0.00 0.00 2.52
283 628 2.176798 TGGCTCCCCTCAGAAAAAGAAA 59.823 45.455 0.00 0.00 0.00 2.52
307 652 5.836024 AACTAGAAGTGGGGTGTATTTGA 57.164 39.130 0.00 0.00 0.00 2.69
310 655 6.790319 ACTAGAAGTGGGGTGTATTTGAATT 58.210 36.000 0.00 0.00 0.00 2.17
379 726 1.145531 CATTGGGCATGTATCAGGGGA 59.854 52.381 0.00 0.00 0.00 4.81
380 727 0.846015 TTGGGCATGTATCAGGGGAG 59.154 55.000 0.00 0.00 0.00 4.30
381 728 0.030195 TGGGCATGTATCAGGGGAGA 60.030 55.000 0.00 0.00 0.00 3.71
382 729 1.140312 GGGCATGTATCAGGGGAGAA 58.860 55.000 0.00 0.00 0.00 2.87
384 731 2.912956 GGGCATGTATCAGGGGAGAATA 59.087 50.000 0.00 0.00 0.00 1.75
385 732 3.525199 GGGCATGTATCAGGGGAGAATAT 59.475 47.826 0.00 0.00 0.00 1.28
386 733 4.384647 GGGCATGTATCAGGGGAGAATATC 60.385 50.000 0.00 0.00 0.00 1.63
387 734 4.225942 GGCATGTATCAGGGGAGAATATCA 59.774 45.833 0.00 0.00 0.00 2.15
388 735 5.104193 GGCATGTATCAGGGGAGAATATCAT 60.104 44.000 0.00 0.00 0.00 2.45
389 736 6.100279 GGCATGTATCAGGGGAGAATATCATA 59.900 42.308 0.00 0.00 0.00 2.15
390 737 6.989169 GCATGTATCAGGGGAGAATATCATAC 59.011 42.308 0.00 0.00 0.00 2.39
391 738 6.775594 TGTATCAGGGGAGAATATCATACG 57.224 41.667 0.00 0.00 0.00 3.06
392 739 5.656859 TGTATCAGGGGAGAATATCATACGG 59.343 44.000 0.00 0.00 0.00 4.02
393 740 4.397919 TCAGGGGAGAATATCATACGGA 57.602 45.455 0.00 0.00 0.00 4.69
394 741 4.747583 TCAGGGGAGAATATCATACGGAA 58.252 43.478 0.00 0.00 0.00 4.30
395 742 5.152193 TCAGGGGAGAATATCATACGGAAA 58.848 41.667 0.00 0.00 0.00 3.13
396 743 5.011738 TCAGGGGAGAATATCATACGGAAAC 59.988 44.000 0.00 0.00 0.00 2.78
397 744 4.286291 AGGGGAGAATATCATACGGAAACC 59.714 45.833 0.00 0.00 0.00 3.27
398 745 4.041198 GGGGAGAATATCATACGGAAACCA 59.959 45.833 0.00 0.00 0.00 3.67
399 746 5.455612 GGGGAGAATATCATACGGAAACCAA 60.456 44.000 0.00 0.00 0.00 3.67
400 747 5.469084 GGGAGAATATCATACGGAAACCAAC 59.531 44.000 0.00 0.00 0.00 3.77
401 748 6.053005 GGAGAATATCATACGGAAACCAACA 58.947 40.000 0.00 0.00 0.00 3.33
402 749 6.710744 GGAGAATATCATACGGAAACCAACAT 59.289 38.462 0.00 0.00 0.00 2.71
403 750 7.228706 GGAGAATATCATACGGAAACCAACATT 59.771 37.037 0.00 0.00 0.00 2.71
404 751 8.154649 AGAATATCATACGGAAACCAACATTC 57.845 34.615 0.00 0.00 0.00 2.67
405 752 7.773224 AGAATATCATACGGAAACCAACATTCA 59.227 33.333 0.00 0.00 0.00 2.57
406 753 7.873719 ATATCATACGGAAACCAACATTCAA 57.126 32.000 0.00 0.00 0.00 2.69
407 754 6.582677 ATCATACGGAAACCAACATTCAAA 57.417 33.333 0.00 0.00 0.00 2.69
408 755 6.007936 TCATACGGAAACCAACATTCAAAG 57.992 37.500 0.00 0.00 0.00 2.77
409 756 5.765677 TCATACGGAAACCAACATTCAAAGA 59.234 36.000 0.00 0.00 0.00 2.52
410 757 4.993029 ACGGAAACCAACATTCAAAGAA 57.007 36.364 0.00 0.00 0.00 2.52
411 758 5.331876 ACGGAAACCAACATTCAAAGAAA 57.668 34.783 0.00 0.00 0.00 2.52
412 759 5.725362 ACGGAAACCAACATTCAAAGAAAA 58.275 33.333 0.00 0.00 0.00 2.29
413 760 5.579119 ACGGAAACCAACATTCAAAGAAAAC 59.421 36.000 0.00 0.00 0.00 2.43
414 761 5.810074 CGGAAACCAACATTCAAAGAAAACT 59.190 36.000 0.00 0.00 0.00 2.66
415 762 6.312672 CGGAAACCAACATTCAAAGAAAACTT 59.687 34.615 0.00 0.00 0.00 2.66
416 763 7.464045 CGGAAACCAACATTCAAAGAAAACTTC 60.464 37.037 0.00 0.00 0.00 3.01
417 764 7.333174 GGAAACCAACATTCAAAGAAAACTTCA 59.667 33.333 0.00 0.00 0.00 3.02
418 765 8.791327 AAACCAACATTCAAAGAAAACTTCAT 57.209 26.923 0.00 0.00 0.00 2.57
419 766 7.775397 ACCAACATTCAAAGAAAACTTCATG 57.225 32.000 0.00 0.00 0.00 3.07
420 767 7.555087 ACCAACATTCAAAGAAAACTTCATGA 58.445 30.769 0.00 0.00 0.00 3.07
421 768 8.040132 ACCAACATTCAAAGAAAACTTCATGAA 58.960 29.630 8.12 8.12 39.99 2.57
422 769 8.881743 CCAACATTCAAAGAAAACTTCATGAAA 58.118 29.630 9.88 0.00 39.51 2.69
425 772 8.882736 ACATTCAAAGAAAACTTCATGAAAACC 58.117 29.630 9.88 0.00 39.51 3.27
426 773 8.881743 CATTCAAAGAAAACTTCATGAAAACCA 58.118 29.630 9.88 0.00 39.51 3.67
427 774 9.617523 ATTCAAAGAAAACTTCATGAAAACCAT 57.382 25.926 9.88 0.00 39.51 3.55
441 788 7.972527 CATGAAAACCATGTTTGAAAGTTTCA 58.027 30.769 14.35 14.35 45.83 2.69
442 789 8.449397 CATGAAAACCATGTTTGAAAGTTTCAA 58.551 29.630 23.91 23.91 45.83 2.69
443 790 9.007901 ATGAAAACCATGTTTGAAAGTTTCAAA 57.992 25.926 30.77 30.77 46.59 2.69
479 826 8.837099 AAAAATATGGGATGTTAACAGGATGA 57.163 30.769 14.65 0.00 39.69 2.92
480 827 9.438163 AAAAATATGGGATGTTAACAGGATGAT 57.562 29.630 14.65 5.06 39.69 2.45
481 828 8.413309 AAATATGGGATGTTAACAGGATGATG 57.587 34.615 14.65 0.00 39.69 3.07
482 829 4.860802 TGGGATGTTAACAGGATGATGT 57.139 40.909 14.65 0.00 39.69 3.06
483 830 5.191727 TGGGATGTTAACAGGATGATGTT 57.808 39.130 14.65 0.00 45.19 2.71
484 831 5.192927 TGGGATGTTAACAGGATGATGTTC 58.807 41.667 14.65 3.18 42.33 3.18
485 832 5.044919 TGGGATGTTAACAGGATGATGTTCT 60.045 40.000 14.65 0.00 42.33 3.01
486 833 6.157820 TGGGATGTTAACAGGATGATGTTCTA 59.842 38.462 14.65 0.00 42.33 2.10
487 834 7.147320 TGGGATGTTAACAGGATGATGTTCTAT 60.147 37.037 14.65 0.00 42.33 1.98
488 835 7.721399 GGGATGTTAACAGGATGATGTTCTATT 59.279 37.037 14.65 0.00 42.33 1.73
489 836 8.562892 GGATGTTAACAGGATGATGTTCTATTG 58.437 37.037 14.65 0.00 42.33 1.90
490 837 9.113838 GATGTTAACAGGATGATGTTCTATTGT 57.886 33.333 14.65 0.00 42.33 2.71
491 838 8.492673 TGTTAACAGGATGATGTTCTATTGTC 57.507 34.615 3.59 0.00 42.33 3.18
492 839 8.100164 TGTTAACAGGATGATGTTCTATTGTCA 58.900 33.333 3.59 0.00 42.33 3.58
493 840 9.113838 GTTAACAGGATGATGTTCTATTGTCAT 57.886 33.333 0.00 0.00 42.33 3.06
494 841 7.563888 AACAGGATGATGTTCTATTGTCATG 57.436 36.000 0.00 0.00 39.13 3.07
495 842 6.656902 ACAGGATGATGTTCTATTGTCATGT 58.343 36.000 0.00 0.00 39.69 3.21
496 843 7.114754 ACAGGATGATGTTCTATTGTCATGTT 58.885 34.615 0.00 0.00 39.69 2.71
497 844 8.267183 ACAGGATGATGTTCTATTGTCATGTTA 58.733 33.333 0.00 0.00 39.69 2.41
498 845 9.112725 CAGGATGATGTTCTATTGTCATGTTAA 57.887 33.333 0.00 0.00 39.69 2.01
499 846 9.685276 AGGATGATGTTCTATTGTCATGTTAAA 57.315 29.630 0.00 0.00 31.86 1.52
523 870 8.582433 AATTTCAAGTTAAAACACATTACGGG 57.418 30.769 0.00 0.00 0.00 5.28
524 871 6.939132 TTCAAGTTAAAACACATTACGGGA 57.061 33.333 0.00 0.00 0.00 5.14
525 872 7.513371 TTCAAGTTAAAACACATTACGGGAT 57.487 32.000 0.00 0.00 0.00 3.85
526 873 8.618702 TTCAAGTTAAAACACATTACGGGATA 57.381 30.769 0.00 0.00 0.00 2.59
527 874 8.618702 TCAAGTTAAAACACATTACGGGATAA 57.381 30.769 0.00 0.00 0.00 1.75
528 875 8.723311 TCAAGTTAAAACACATTACGGGATAAG 58.277 33.333 0.00 0.00 0.00 1.73
529 876 7.080353 AGTTAAAACACATTACGGGATAAGC 57.920 36.000 0.00 0.00 0.00 3.09
530 877 6.882678 AGTTAAAACACATTACGGGATAAGCT 59.117 34.615 0.00 0.00 0.00 3.74
531 878 8.042515 AGTTAAAACACATTACGGGATAAGCTA 58.957 33.333 0.00 0.00 0.00 3.32
532 879 8.833493 GTTAAAACACATTACGGGATAAGCTAT 58.167 33.333 0.00 0.00 0.00 2.97
533 880 6.861065 AAACACATTACGGGATAAGCTATG 57.139 37.500 0.00 0.00 0.00 2.23
534 881 5.801531 ACACATTACGGGATAAGCTATGA 57.198 39.130 0.00 0.00 0.00 2.15
535 882 6.169557 ACACATTACGGGATAAGCTATGAA 57.830 37.500 0.00 0.00 0.00 2.57
536 883 6.588204 ACACATTACGGGATAAGCTATGAAA 58.412 36.000 0.00 0.00 0.00 2.69
537 884 7.051623 ACACATTACGGGATAAGCTATGAAAA 58.948 34.615 0.00 0.00 0.00 2.29
538 885 7.554835 ACACATTACGGGATAAGCTATGAAAAA 59.445 33.333 0.00 0.00 0.00 1.94
539 886 8.070171 CACATTACGGGATAAGCTATGAAAAAG 58.930 37.037 0.00 0.00 0.00 2.27
540 887 7.990886 ACATTACGGGATAAGCTATGAAAAAGA 59.009 33.333 0.00 0.00 0.00 2.52
541 888 9.003658 CATTACGGGATAAGCTATGAAAAAGAT 57.996 33.333 0.00 0.00 0.00 2.40
544 891 8.974060 ACGGGATAAGCTATGAAAAAGATAAA 57.026 30.769 0.00 0.00 0.00 1.40
545 892 9.574516 ACGGGATAAGCTATGAAAAAGATAAAT 57.425 29.630 0.00 0.00 0.00 1.40
564 911 9.261180 AGATAAATACCACAATGAATAGTGACG 57.739 33.333 0.00 0.00 37.97 4.35
565 912 8.958119 ATAAATACCACAATGAATAGTGACGT 57.042 30.769 0.00 0.00 37.97 4.34
567 914 7.766219 AATACCACAATGAATAGTGACGTAC 57.234 36.000 0.00 0.00 37.97 3.67
568 915 5.401531 ACCACAATGAATAGTGACGTACT 57.598 39.130 0.00 0.00 43.56 2.73
569 916 5.168569 ACCACAATGAATAGTGACGTACTG 58.831 41.667 0.00 0.00 40.65 2.74
570 917 5.168569 CCACAATGAATAGTGACGTACTGT 58.831 41.667 0.00 0.00 40.65 3.55
571 918 5.637810 CCACAATGAATAGTGACGTACTGTT 59.362 40.000 0.00 0.00 42.57 3.16
572 919 6.147164 CCACAATGAATAGTGACGTACTGTTT 59.853 38.462 0.00 0.00 40.34 2.83
573 920 7.009440 CACAATGAATAGTGACGTACTGTTTG 58.991 38.462 0.00 0.00 40.34 2.93
574 921 6.926826 ACAATGAATAGTGACGTACTGTTTGA 59.073 34.615 0.00 0.00 40.34 2.69
575 922 6.946229 ATGAATAGTGACGTACTGTTTGAC 57.054 37.500 0.00 0.00 40.34 3.18
576 923 5.834169 TGAATAGTGACGTACTGTTTGACA 58.166 37.500 0.00 0.00 40.34 3.58
577 924 5.688621 TGAATAGTGACGTACTGTTTGACAC 59.311 40.000 0.00 0.00 40.34 3.67
578 925 3.795623 AGTGACGTACTGTTTGACACT 57.204 42.857 9.81 9.81 38.49 3.55
579 926 4.906065 AGTGACGTACTGTTTGACACTA 57.094 40.909 12.55 0.00 38.49 2.74
580 927 5.449107 AGTGACGTACTGTTTGACACTAT 57.551 39.130 12.55 0.00 38.49 2.12
581 928 5.839621 AGTGACGTACTGTTTGACACTATT 58.160 37.500 12.55 0.00 38.49 1.73
582 929 5.919141 AGTGACGTACTGTTTGACACTATTC 59.081 40.000 12.55 0.00 38.49 1.75
583 930 5.688621 GTGACGTACTGTTTGACACTATTCA 59.311 40.000 0.00 0.00 0.00 2.57
584 931 6.199531 GTGACGTACTGTTTGACACTATTCAA 59.800 38.462 0.00 0.00 33.55 2.69
585 932 6.926826 TGACGTACTGTTTGACACTATTCAAT 59.073 34.615 0.00 0.00 35.42 2.57
586 933 8.083462 TGACGTACTGTTTGACACTATTCAATA 58.917 33.333 0.00 0.00 35.42 1.90
587 934 8.236084 ACGTACTGTTTGACACTATTCAATAC 57.764 34.615 0.00 0.00 35.42 1.89
588 935 8.086522 ACGTACTGTTTGACACTATTCAATACT 58.913 33.333 0.00 0.00 35.42 2.12
589 936 8.373256 CGTACTGTTTGACACTATTCAATACTG 58.627 37.037 0.00 0.00 35.42 2.74
590 937 9.419297 GTACTGTTTGACACTATTCAATACTGA 57.581 33.333 0.00 0.00 35.42 3.41
592 939 9.507329 ACTGTTTGACACTATTCAATACTGATT 57.493 29.630 0.00 0.00 35.42 2.57
605 952 9.965824 ATTCAATACTGATTTTGTTTTTCTCGT 57.034 25.926 0.00 0.00 0.00 4.18
606 953 8.781067 TCAATACTGATTTTGTTTTTCTCGTG 57.219 30.769 0.00 0.00 0.00 4.35
607 954 7.860373 TCAATACTGATTTTGTTTTTCTCGTGG 59.140 33.333 0.00 0.00 0.00 4.94
608 955 4.359706 ACTGATTTTGTTTTTCTCGTGGC 58.640 39.130 0.00 0.00 0.00 5.01
609 956 4.097892 ACTGATTTTGTTTTTCTCGTGGCT 59.902 37.500 0.00 0.00 0.00 4.75
610 957 4.606961 TGATTTTGTTTTTCTCGTGGCTC 58.393 39.130 0.00 0.00 0.00 4.70
611 958 4.097135 TGATTTTGTTTTTCTCGTGGCTCA 59.903 37.500 0.00 0.00 0.00 4.26
612 959 3.414549 TTTGTTTTTCTCGTGGCTCAC 57.585 42.857 0.00 0.00 0.00 3.51
613 960 2.031258 TGTTTTTCTCGTGGCTCACA 57.969 45.000 6.21 0.00 33.40 3.58
614 961 2.571212 TGTTTTTCTCGTGGCTCACAT 58.429 42.857 6.21 0.00 33.40 3.21
615 962 2.290367 TGTTTTTCTCGTGGCTCACATG 59.710 45.455 6.21 0.00 37.44 3.21
616 963 2.254546 TTTTCTCGTGGCTCACATGT 57.745 45.000 0.00 0.00 37.38 3.21
617 964 1.795768 TTTCTCGTGGCTCACATGTC 58.204 50.000 0.00 0.00 37.38 3.06
618 965 0.678950 TTCTCGTGGCTCACATGTCA 59.321 50.000 0.00 0.00 37.38 3.58
619 966 0.897621 TCTCGTGGCTCACATGTCAT 59.102 50.000 0.00 0.00 37.38 3.06
620 967 2.099405 TCTCGTGGCTCACATGTCATA 58.901 47.619 0.00 0.00 37.38 2.15
621 968 2.159240 TCTCGTGGCTCACATGTCATAC 60.159 50.000 0.00 0.00 37.38 2.39
622 969 1.824852 TCGTGGCTCACATGTCATACT 59.175 47.619 0.00 0.00 37.38 2.12
623 970 1.929169 CGTGGCTCACATGTCATACTG 59.071 52.381 0.00 0.00 33.40 2.74
624 971 2.675032 CGTGGCTCACATGTCATACTGT 60.675 50.000 0.00 0.00 33.40 3.55
625 972 2.674852 GTGGCTCACATGTCATACTGTG 59.325 50.000 0.00 0.00 43.24 3.66
632 979 6.726258 TCACATGTCATACTGTGATTGAAC 57.274 37.500 0.00 0.00 45.01 3.18
633 980 6.466812 TCACATGTCATACTGTGATTGAACT 58.533 36.000 0.00 0.00 45.01 3.01
634 981 6.936335 TCACATGTCATACTGTGATTGAACTT 59.064 34.615 0.00 0.00 45.01 2.66
635 982 7.019418 CACATGTCATACTGTGATTGAACTTG 58.981 38.462 0.00 0.00 44.35 3.16
636 983 6.936335 ACATGTCATACTGTGATTGAACTTGA 59.064 34.615 0.00 0.00 39.48 3.02
637 984 7.445096 ACATGTCATACTGTGATTGAACTTGAA 59.555 33.333 0.00 0.00 39.48 2.69
638 985 7.800155 TGTCATACTGTGATTGAACTTGAAA 57.200 32.000 0.00 0.00 39.48 2.69
639 986 8.394971 TGTCATACTGTGATTGAACTTGAAAT 57.605 30.769 0.00 0.00 39.48 2.17
640 987 8.849168 TGTCATACTGTGATTGAACTTGAAATT 58.151 29.630 0.00 0.00 39.48 1.82
641 988 9.683069 GTCATACTGTGATTGAACTTGAAATTT 57.317 29.630 0.00 0.00 39.48 1.82
644 991 7.237920 ACTGTGATTGAACTTGAAATTTTGC 57.762 32.000 0.00 0.00 0.00 3.68
645 992 6.817641 ACTGTGATTGAACTTGAAATTTTGCA 59.182 30.769 0.00 0.00 0.00 4.08
646 993 7.010738 ACTGTGATTGAACTTGAAATTTTGCAG 59.989 33.333 0.00 0.00 0.00 4.41
647 994 6.258287 TGTGATTGAACTTGAAATTTTGCAGG 59.742 34.615 0.00 0.00 0.00 4.85
648 995 5.759273 TGATTGAACTTGAAATTTTGCAGGG 59.241 36.000 0.00 0.00 0.00 4.45
649 996 3.465871 TGAACTTGAAATTTTGCAGGGC 58.534 40.909 0.00 0.00 0.00 5.19
650 997 3.118482 TGAACTTGAAATTTTGCAGGGCA 60.118 39.130 0.00 0.00 36.47 5.36
664 1011 4.592942 TGCAGGGCAATAGAATATCATCC 58.407 43.478 0.00 0.00 34.76 3.51
665 1012 4.290459 TGCAGGGCAATAGAATATCATCCT 59.710 41.667 0.00 0.00 34.76 3.24
666 1013 4.880696 GCAGGGCAATAGAATATCATCCTC 59.119 45.833 0.00 0.00 0.00 3.71
667 1014 5.339035 GCAGGGCAATAGAATATCATCCTCT 60.339 44.000 0.00 0.00 0.00 3.69
668 1015 6.347696 CAGGGCAATAGAATATCATCCTCTC 58.652 44.000 0.00 0.00 0.00 3.20
669 1016 6.028131 AGGGCAATAGAATATCATCCTCTCA 58.972 40.000 0.00 0.00 0.00 3.27
670 1017 6.503217 AGGGCAATAGAATATCATCCTCTCAA 59.497 38.462 0.00 0.00 0.00 3.02
671 1018 6.597280 GGGCAATAGAATATCATCCTCTCAAC 59.403 42.308 0.00 0.00 0.00 3.18
672 1019 7.164122 GGCAATAGAATATCATCCTCTCAACA 58.836 38.462 0.00 0.00 0.00 3.33
673 1020 7.828223 GGCAATAGAATATCATCCTCTCAACAT 59.172 37.037 0.00 0.00 0.00 2.71
674 1021 8.881743 GCAATAGAATATCATCCTCTCAACATC 58.118 37.037 0.00 0.00 0.00 3.06
677 1024 6.923012 AGAATATCATCCTCTCAACATCTCG 58.077 40.000 0.00 0.00 0.00 4.04
678 1025 6.493115 AGAATATCATCCTCTCAACATCTCGT 59.507 38.462 0.00 0.00 0.00 4.18
679 1026 7.667635 AGAATATCATCCTCTCAACATCTCGTA 59.332 37.037 0.00 0.00 0.00 3.43
680 1027 7.953005 ATATCATCCTCTCAACATCTCGTAT 57.047 36.000 0.00 0.00 0.00 3.06
681 1028 6.662865 ATCATCCTCTCAACATCTCGTATT 57.337 37.500 0.00 0.00 0.00 1.89
682 1029 6.471233 TCATCCTCTCAACATCTCGTATTT 57.529 37.500 0.00 0.00 0.00 1.40
683 1030 6.878317 TCATCCTCTCAACATCTCGTATTTT 58.122 36.000 0.00 0.00 0.00 1.82
684 1031 7.331026 TCATCCTCTCAACATCTCGTATTTTT 58.669 34.615 0.00 0.00 0.00 1.94
722 1069 9.695884 TTCGAAACTTTAAAACATCATTTTTGC 57.304 25.926 0.00 0.00 31.15 3.68
723 1070 8.053072 TCGAAACTTTAAAACATCATTTTTGCG 58.947 29.630 0.00 0.00 31.15 4.85
724 1071 7.843686 CGAAACTTTAAAACATCATTTTTGCGT 59.156 29.630 0.00 0.00 31.15 5.24
725 1072 8.819152 AAACTTTAAAACATCATTTTTGCGTG 57.181 26.923 0.00 0.00 31.15 5.34
726 1073 6.942891 ACTTTAAAACATCATTTTTGCGTGG 58.057 32.000 0.00 0.00 31.15 4.94
727 1074 6.536941 ACTTTAAAACATCATTTTTGCGTGGT 59.463 30.769 0.00 0.00 31.15 4.16
728 1075 6.910536 TTAAAACATCATTTTTGCGTGGTT 57.089 29.167 0.00 0.00 31.15 3.67
729 1076 5.809719 AAAACATCATTTTTGCGTGGTTT 57.190 30.435 0.00 0.00 0.00 3.27
730 1077 5.809719 AAACATCATTTTTGCGTGGTTTT 57.190 30.435 0.00 0.00 0.00 2.43
731 1078 5.402464 AACATCATTTTTGCGTGGTTTTC 57.598 34.783 0.00 0.00 0.00 2.29
732 1079 4.437239 ACATCATTTTTGCGTGGTTTTCA 58.563 34.783 0.00 0.00 0.00 2.69
733 1080 5.055812 ACATCATTTTTGCGTGGTTTTCAT 58.944 33.333 0.00 0.00 0.00 2.57
734 1081 5.177327 ACATCATTTTTGCGTGGTTTTCATC 59.823 36.000 0.00 0.00 0.00 2.92
735 1082 3.733224 TCATTTTTGCGTGGTTTTCATCG 59.267 39.130 0.00 0.00 0.00 3.84
736 1083 2.126914 TTTTGCGTGGTTTTCATCGG 57.873 45.000 0.00 0.00 0.00 4.18
737 1084 1.025812 TTTGCGTGGTTTTCATCGGT 58.974 45.000 0.00 0.00 0.00 4.69
738 1085 1.025812 TTGCGTGGTTTTCATCGGTT 58.974 45.000 0.00 0.00 0.00 4.44
739 1086 1.025812 TGCGTGGTTTTCATCGGTTT 58.974 45.000 0.00 0.00 0.00 3.27
740 1087 1.405821 TGCGTGGTTTTCATCGGTTTT 59.594 42.857 0.00 0.00 0.00 2.43
741 1088 2.048498 GCGTGGTTTTCATCGGTTTTC 58.952 47.619 0.00 0.00 0.00 2.29
742 1089 2.541999 GCGTGGTTTTCATCGGTTTTCA 60.542 45.455 0.00 0.00 0.00 2.69
743 1090 3.040099 CGTGGTTTTCATCGGTTTTCAC 58.960 45.455 0.00 0.00 0.00 3.18
744 1091 3.242936 CGTGGTTTTCATCGGTTTTCACT 60.243 43.478 0.00 0.00 0.00 3.41
745 1092 4.024725 CGTGGTTTTCATCGGTTTTCACTA 60.025 41.667 0.00 0.00 0.00 2.74
746 1093 5.504337 CGTGGTTTTCATCGGTTTTCACTAA 60.504 40.000 0.00 0.00 0.00 2.24
747 1094 6.267070 GTGGTTTTCATCGGTTTTCACTAAA 58.733 36.000 0.00 0.00 0.00 1.85
748 1095 6.197655 GTGGTTTTCATCGGTTTTCACTAAAC 59.802 38.462 0.00 0.00 44.39 2.01
749 1096 5.397240 GGTTTTCATCGGTTTTCACTAAACG 59.603 40.000 0.00 0.00 45.75 3.60
750 1097 5.738118 TTTCATCGGTTTTCACTAAACGT 57.262 34.783 0.00 0.00 45.75 3.99
751 1098 5.738118 TTCATCGGTTTTCACTAAACGTT 57.262 34.783 0.00 0.00 45.75 3.99
752 1099 5.085636 TCATCGGTTTTCACTAAACGTTG 57.914 39.130 0.00 0.00 45.75 4.10
753 1100 3.948196 TCGGTTTTCACTAAACGTTGG 57.052 42.857 0.00 0.17 45.75 3.77
754 1101 3.269178 TCGGTTTTCACTAAACGTTGGT 58.731 40.909 0.00 0.90 45.75 3.67
755 1102 3.688673 TCGGTTTTCACTAAACGTTGGTT 59.311 39.130 0.00 0.00 45.75 3.67
756 1103 4.155644 TCGGTTTTCACTAAACGTTGGTTT 59.844 37.500 0.00 0.00 45.75 3.27
757 1104 4.858140 CGGTTTTCACTAAACGTTGGTTTT 59.142 37.500 0.00 0.00 43.69 2.43
758 1105 5.003684 CGGTTTTCACTAAACGTTGGTTTTC 59.996 40.000 0.00 0.00 43.69 2.29
759 1106 5.862860 GGTTTTCACTAAACGTTGGTTTTCA 59.137 36.000 0.00 0.00 43.69 2.69
760 1107 6.532302 GGTTTTCACTAAACGTTGGTTTTCAT 59.468 34.615 0.00 0.00 43.69 2.57
761 1108 7.701501 GGTTTTCACTAAACGTTGGTTTTCATA 59.298 33.333 0.00 0.00 43.69 2.15
762 1109 9.240159 GTTTTCACTAAACGTTGGTTTTCATAT 57.760 29.630 0.00 0.00 43.69 1.78
763 1110 8.789881 TTTCACTAAACGTTGGTTTTCATATG 57.210 30.769 0.00 0.00 43.69 1.78
764 1111 7.731882 TCACTAAACGTTGGTTTTCATATGA 57.268 32.000 0.00 0.00 43.69 2.15
765 1112 8.330466 TCACTAAACGTTGGTTTTCATATGAT 57.670 30.769 6.17 0.00 43.69 2.45
766 1113 8.233868 TCACTAAACGTTGGTTTTCATATGATG 58.766 33.333 6.17 0.00 43.69 3.07
767 1114 8.020819 CACTAAACGTTGGTTTTCATATGATGT 58.979 33.333 6.17 0.00 43.69 3.06
768 1115 8.573035 ACTAAACGTTGGTTTTCATATGATGTT 58.427 29.630 6.17 0.00 43.69 2.71
769 1116 9.405587 CTAAACGTTGGTTTTCATATGATGTTT 57.594 29.630 6.17 9.49 43.69 2.83
770 1117 7.867445 AACGTTGGTTTTCATATGATGTTTC 57.133 32.000 6.17 0.00 30.42 2.78
771 1118 6.386654 ACGTTGGTTTTCATATGATGTTTCC 58.613 36.000 6.17 6.19 0.00 3.13
772 1119 5.804979 CGTTGGTTTTCATATGATGTTTCCC 59.195 40.000 6.17 2.37 0.00 3.97
773 1120 5.930837 TGGTTTTCATATGATGTTTCCCC 57.069 39.130 6.17 1.37 0.00 4.81
779 1126 8.935844 GTTTTCATATGATGTTTCCCCTTTTTC 58.064 33.333 6.17 0.00 0.00 2.29
780 1127 8.434589 TTTCATATGATGTTTCCCCTTTTTCT 57.565 30.769 6.17 0.00 0.00 2.52
788 1135 5.739959 TGTTTCCCCTTTTTCTTTTCCAAG 58.260 37.500 0.00 0.00 0.00 3.61
797 1144 7.015195 CCCTTTTTCTTTTCCAAGATGACCTAA 59.985 37.037 0.00 0.00 38.89 2.69
799 1146 9.987272 CTTTTTCTTTTCCAAGATGACCTAAAT 57.013 29.630 0.00 0.00 38.89 1.40
836 1202 3.174779 ACCAAAGGACTCCTCTAGAACC 58.825 50.000 0.00 0.00 30.89 3.62
872 1239 0.398381 CCCTCTCCCCTCCTCTCTTG 60.398 65.000 0.00 0.00 0.00 3.02
874 1241 0.633921 CTCTCCCCTCCTCTCTTGGA 59.366 60.000 0.00 0.00 34.52 3.53
1495 1882 0.253044 TCTGCAAGAAAGGGGGATCG 59.747 55.000 0.00 0.00 42.31 3.69
1506 1893 0.035439 GGGGGATCGCTTTCTGTTGA 60.035 55.000 9.90 0.00 0.00 3.18
1519 1909 5.456763 GCTTTCTGTTGATCCCATATACCCT 60.457 44.000 0.00 0.00 0.00 4.34
1536 1926 3.374764 ACCCTTTTGAAGCCAGAAAACT 58.625 40.909 0.00 0.00 0.00 2.66
1544 1934 3.807622 TGAAGCCAGAAAACTGAAGTACG 59.192 43.478 0.00 0.00 0.00 3.67
1703 2094 4.002982 GCTTCTTTGGGCCAAAAATAAGG 58.997 43.478 30.07 21.10 32.75 2.69
1757 2148 3.769844 TCCTTGGCTAGAACTTCTGGTAG 59.230 47.826 1.17 0.00 0.00 3.18
1845 2236 4.357142 TCATTAGACGTCGGAAATGCTAC 58.643 43.478 24.43 0.00 30.99 3.58
1902 2293 6.624423 ACAAGCAGTGGTGATAATTTTCATC 58.376 36.000 1.79 2.15 0.00 2.92
1905 2296 5.359009 AGCAGTGGTGATAATTTTCATCAGG 59.641 40.000 11.56 8.65 37.41 3.86
1907 2298 5.653769 CAGTGGTGATAATTTTCATCAGGGT 59.346 40.000 11.56 0.00 37.41 4.34
1908 2299 5.653769 AGTGGTGATAATTTTCATCAGGGTG 59.346 40.000 11.56 0.00 37.41 4.61
1929 2320 1.287815 CTGTGGTTGCACAGCATGG 59.712 57.895 0.00 0.00 44.79 3.66
1935 2326 3.192422 GTGGTTGCACAGCATGGTATTTA 59.808 43.478 0.00 0.00 43.62 1.40
1936 2327 3.829026 TGGTTGCACAGCATGGTATTTAA 59.171 39.130 0.00 0.00 43.62 1.52
1944 2335 3.632145 CAGCATGGTATTTAAGGTGGGTC 59.368 47.826 0.00 0.00 0.00 4.46
1956 2492 2.908015 TGGGTCGCCTTAGCCATC 59.092 61.111 0.00 0.00 41.99 3.51
1984 2520 1.153025 GGGAATGAACTACGGGGGC 60.153 63.158 0.00 0.00 0.00 5.80
2154 2696 2.917933 CGCAGATACTGGGAATGGAAA 58.082 47.619 9.63 0.00 45.41 3.13
2322 3600 9.653287 CTGTAGTGTTTCTTGGAATGTAATCTA 57.347 33.333 0.00 0.00 0.00 1.98
2903 4181 8.480853 GTTGTGCTTTTTGTTGCGTTATTATTA 58.519 29.630 0.00 0.00 0.00 0.98
2988 4268 0.537188 GGAGTAGGCACTAGCTTGCA 59.463 55.000 12.28 0.00 44.14 4.08
3263 4736 0.094730 GATCGTTTTCAAGGCGTCCG 59.905 55.000 0.00 0.00 0.00 4.79
3419 4892 6.882678 AGTGAATGTATAACACACCCTAAACC 59.117 38.462 0.00 0.00 40.86 3.27
3660 5133 9.093970 TCCAGTTAGTATATTTCGTTTCATGTG 57.906 33.333 0.00 0.00 0.00 3.21
3745 5378 8.776680 TTTTCTCGTTTTATTGAAAGTGCTAC 57.223 30.769 0.00 0.00 31.37 3.58
3767 5400 4.217550 ACCAAATAGGACGATGGTGTTTTG 59.782 41.667 0.00 0.00 44.25 2.44
3768 5401 4.380444 CCAAATAGGACGATGGTGTTTTGG 60.380 45.833 0.00 0.00 41.22 3.28
3769 5402 3.713826 ATAGGACGATGGTGTTTTGGT 57.286 42.857 0.00 0.00 0.00 3.67
3770 5403 1.604604 AGGACGATGGTGTTTTGGTG 58.395 50.000 0.00 0.00 0.00 4.17
3771 5404 1.133915 AGGACGATGGTGTTTTGGTGT 60.134 47.619 0.00 0.00 0.00 4.16
3772 5405 1.001815 GGACGATGGTGTTTTGGTGTG 60.002 52.381 0.00 0.00 0.00 3.82
3773 5406 0.383949 ACGATGGTGTTTTGGTGTGC 59.616 50.000 0.00 0.00 0.00 4.57
3774 5407 0.318614 CGATGGTGTTTTGGTGTGCC 60.319 55.000 0.00 0.00 0.00 5.01
3829 5462 8.265764 AGTAAAACAGTTCAAAAGTCTACTCCT 58.734 33.333 0.00 0.00 0.00 3.69
3830 5463 9.538508 GTAAAACAGTTCAAAAGTCTACTCCTA 57.461 33.333 0.00 0.00 0.00 2.94
3902 5537 5.811399 TTGTGAAGAGACGACATGTTTTT 57.189 34.783 0.00 0.00 0.00 1.94
3947 5582 9.573133 CTGTTTTGAATATCCAATCAAGTAACC 57.427 33.333 0.00 0.00 36.93 2.85
4043 5678 3.066621 TGTTCTTTCACCACATGCAAGTC 59.933 43.478 0.00 0.00 33.67 3.01
4166 5802 8.601845 AAATTTGGTATTTTCCAGTAGTTTGC 57.398 30.769 0.00 0.00 38.80 3.68
4595 6231 7.355101 AGGAGACAGATAGAGGTTTGTGTATA 58.645 38.462 0.00 0.00 0.00 1.47
4670 6306 7.003402 AGCATTATTTTTAGGTTTGCTCCAA 57.997 32.000 0.00 0.00 34.02 3.53
4713 6349 3.925913 CACCATTTCATTTTTACCTGCCG 59.074 43.478 0.00 0.00 0.00 5.69
4730 6366 4.498009 CCTGCCGTCAATTTCATATGTTCC 60.498 45.833 1.90 0.00 0.00 3.62
4733 6369 5.126869 TGCCGTCAATTTCATATGTTCCATT 59.873 36.000 1.90 0.00 0.00 3.16
4824 6461 0.165944 GAATGACCACGAGGCAAACG 59.834 55.000 0.00 0.00 39.06 3.60
4881 6518 9.899226 ATACTGTGAAGTTTTAAGAAGCATTTC 57.101 29.630 0.00 0.00 0.00 2.17
4937 6575 2.380410 GCCGACACGCAACCTACAG 61.380 63.158 0.00 0.00 0.00 2.74
5014 7287 1.676967 GCTTGGGCTAGCTTGCTGT 60.677 57.895 19.45 0.00 38.15 4.40
5091 7366 6.426328 ACTGAACTTTGACAGAGAAGCAATAG 59.574 38.462 0.00 0.00 37.54 1.73
5155 7430 1.272769 GTCGTCAGTGCCCTCTAGTTT 59.727 52.381 0.00 0.00 0.00 2.66
5344 7619 1.064003 ATATCCATAGCCGTTGCCCA 58.936 50.000 0.00 0.00 38.69 5.36
5355 7630 1.679139 CGTTGCCCATGGACATATGT 58.321 50.000 15.22 8.43 0.00 2.29
5465 7740 3.191162 GGCAGACACAATGCACTTCAATA 59.809 43.478 0.00 0.00 45.68 1.90
5589 7884 4.953940 TTGTTAGATTGCCCTTTTTGCT 57.046 36.364 0.00 0.00 0.00 3.91
5619 7914 6.371278 AGCTGTAGATGGAATTTGGATTCAT 58.629 36.000 0.00 0.00 42.82 2.57
5620 7915 6.837568 AGCTGTAGATGGAATTTGGATTCATT 59.162 34.615 0.00 0.00 42.82 2.57
5722 8018 2.930019 CACCCTCTGGCCACCTCA 60.930 66.667 0.00 0.00 33.59 3.86
6006 8302 3.702792 CCTAGAGAGGTCTTGACTTGGA 58.297 50.000 0.00 0.00 38.16 3.53
6012 8308 6.239345 TAGAGAGGTCTTGACTTGGAAAGTTC 60.239 42.308 0.61 0.00 45.60 3.01
6073 8369 8.274322 TCATCCTTCACATATTGTAATCCACTT 58.726 33.333 0.00 0.00 0.00 3.16
6078 8374 5.066375 TCACATATTGTAATCCACTTGCTGC 59.934 40.000 0.00 0.00 0.00 5.25
6198 8494 9.308000 TCAGTTGGTATTGTCATTTCCTTTTAT 57.692 29.630 0.00 0.00 0.00 1.40
6267 8563 6.510879 GGATTTTGTCCGGAAGATAAAACT 57.489 37.500 5.23 0.00 45.00 2.66
6269 8565 8.221965 GGATTTTGTCCGGAAGATAAAACTAT 57.778 34.615 5.23 0.00 45.00 2.12
6274 8570 5.055144 GTCCGGAAGATAAAACTATCACCC 58.945 45.833 5.23 0.00 0.00 4.61
6285 8581 9.886132 GATAAAACTATCACCCTCTTTTGTAGA 57.114 33.333 0.00 0.00 0.00 2.59
6292 8590 5.070001 TCACCCTCTTTTGTAGAAACATGG 58.930 41.667 0.00 0.00 34.97 3.66
6342 8641 2.359230 ACTCGAGCTTTGGGCAGC 60.359 61.111 13.61 0.00 44.79 5.25
6383 8682 6.183360 GGCTCAAATTAGAGGATCAAAGTGAC 60.183 42.308 0.00 0.00 37.82 3.67
6529 8832 8.712285 TTTGATTAACTTACGTAGGAAGATGG 57.288 34.615 12.14 0.00 0.00 3.51
6648 8952 1.562008 TGATGGATTGCCCTAAACCGA 59.438 47.619 0.00 0.00 34.12 4.69
6660 8964 3.366985 CCCTAAACCGATTGCAAGGAAAC 60.367 47.826 11.47 0.00 0.00 2.78
6673 8978 3.674955 GCAAGGAAACGTTCACTGGTTTT 60.675 43.478 0.00 0.00 36.55 2.43
6722 9027 6.426328 CCAGGACATCAATCTTGATACTAAGC 59.574 42.308 5.16 0.00 45.62 3.09
6725 9030 6.701841 GGACATCAATCTTGATACTAAGCGAA 59.298 38.462 5.16 0.00 45.62 4.70
6731 9036 7.232737 TCAATCTTGATACTAAGCGAAGGGATA 59.767 37.037 0.00 0.00 31.01 2.59
6754 9059 2.353406 GCTGCATGCTCACCTTGAATTT 60.353 45.455 20.33 0.00 38.95 1.82
6756 9061 3.159472 TGCATGCTCACCTTGAATTTCT 58.841 40.909 20.33 0.00 0.00 2.52
6771 9076 6.653273 TGAATTTCTGTCACGATCAAGATC 57.347 37.500 0.00 0.00 34.56 2.75
6811 9116 3.347216 TCAGGATCTTAAGCTTTGGTGC 58.653 45.455 3.20 0.00 0.00 5.01
6817 9122 0.961019 TTAAGCTTTGGTGCCTGCTG 59.039 50.000 3.20 0.00 35.79 4.41
6832 9137 3.144506 CCTGCTGTCAATTCACTTCAGT 58.855 45.455 2.29 0.00 0.00 3.41
6839 9144 6.609237 TGTCAATTCACTTCAGTTTCTCTG 57.391 37.500 0.00 0.00 44.85 3.35
6860 9165 3.069586 TGTGCCTCCTTCCATTCTATACG 59.930 47.826 0.00 0.00 0.00 3.06
6861 9166 2.632996 TGCCTCCTTCCATTCTATACGG 59.367 50.000 0.00 0.00 0.00 4.02
6862 9167 2.897969 GCCTCCTTCCATTCTATACGGA 59.102 50.000 0.00 0.00 0.00 4.69
6868 9364 3.746045 TCCATTCTATACGGAGTTGGC 57.254 47.619 0.00 0.00 37.78 4.52
6878 9374 1.003262 CGGAGTTGGCGCATGTTTTG 61.003 55.000 10.83 0.00 0.00 2.44
6881 9377 1.522258 GAGTTGGCGCATGTTTTGTTG 59.478 47.619 10.83 0.00 0.00 3.33
6882 9378 0.581053 GTTGGCGCATGTTTTGTTGG 59.419 50.000 10.83 0.00 0.00 3.77
6883 9379 1.156645 TTGGCGCATGTTTTGTTGGC 61.157 50.000 10.83 0.00 0.00 4.52
6884 9380 1.593750 GGCGCATGTTTTGTTGGCA 60.594 52.632 10.83 0.00 0.00 4.92
6885 9381 0.950071 GGCGCATGTTTTGTTGGCAT 60.950 50.000 10.83 0.00 0.00 4.40
6886 9382 0.867086 GCGCATGTTTTGTTGGCATT 59.133 45.000 0.30 0.00 0.00 3.56
6888 9384 2.662520 GCGCATGTTTTGTTGGCATTTC 60.663 45.455 0.30 0.00 0.00 2.17
6889 9385 2.410006 CGCATGTTTTGTTGGCATTTCG 60.410 45.455 0.00 0.00 0.00 3.46
6955 9454 2.505819 TGGGAATCCTCTTGCTAACTCC 59.494 50.000 0.00 0.00 0.00 3.85
6963 9462 2.744202 CTCTTGCTAACTCCGTGCATTT 59.256 45.455 0.00 0.00 36.55 2.32
6964 9463 2.483877 TCTTGCTAACTCCGTGCATTTG 59.516 45.455 0.00 0.00 36.55 2.32
6965 9464 1.164411 TGCTAACTCCGTGCATTTGG 58.836 50.000 0.00 0.00 0.00 3.28
6966 9465 1.165270 GCTAACTCCGTGCATTTGGT 58.835 50.000 0.00 0.00 0.00 3.67
6967 9466 1.539827 GCTAACTCCGTGCATTTGGTT 59.460 47.619 0.00 0.00 0.00 3.67
6968 9467 2.030274 GCTAACTCCGTGCATTTGGTTT 60.030 45.455 0.00 0.00 0.00 3.27
6969 9468 3.189702 GCTAACTCCGTGCATTTGGTTTA 59.810 43.478 0.00 0.00 0.00 2.01
6970 9469 4.142469 GCTAACTCCGTGCATTTGGTTTAT 60.142 41.667 0.00 0.00 0.00 1.40
6971 9470 4.434713 AACTCCGTGCATTTGGTTTATC 57.565 40.909 0.00 0.00 0.00 1.75
6974 9473 1.202245 CCGTGCATTTGGTTTATCCGG 60.202 52.381 0.00 0.00 39.52 5.14
6986 9485 4.202440 TGGTTTATCCGGTTTACTGGTTCA 60.202 41.667 0.00 0.00 43.01 3.18
6987 9486 4.393990 GGTTTATCCGGTTTACTGGTTCAG 59.606 45.833 0.00 0.00 43.01 3.02
6994 9493 6.165577 TCCGGTTTACTGGTTCAGTTTATAC 58.834 40.000 0.00 0.88 42.59 1.47
7003 9502 6.543100 ACTGGTTCAGTTTATACGGTTTTTCA 59.457 34.615 0.00 0.00 42.59 2.69
7004 9503 7.067251 ACTGGTTCAGTTTATACGGTTTTTCAA 59.933 33.333 0.00 0.00 42.59 2.69
7037 9536 8.418662 TGATACTAATACTTCAGTAAATGCGGT 58.581 33.333 0.00 0.00 33.76 5.68
7041 9540 6.861065 AATACTTCAGTAAATGCGGTATGG 57.139 37.500 0.00 0.00 33.76 2.74
7061 9560 8.755028 GGTATGGTATTAAAGATGGTTTGGTTT 58.245 33.333 0.00 0.00 0.00 3.27
7122 9626 3.570559 ACCATAAAACCAAATTGACGCG 58.429 40.909 3.53 3.53 0.00 6.01
7142 9646 6.146216 ACGCGAATTTGAAAATGATGTGTAA 58.854 32.000 15.93 0.00 0.00 2.41
7242 9749 7.067859 GCATGCATGGATTAGATGGTTATGTAT 59.932 37.037 27.34 0.00 0.00 2.29
7245 9752 7.391275 TGCATGGATTAGATGGTTATGTATGTG 59.609 37.037 0.00 0.00 0.00 3.21
7303 9811 7.692908 ACAAGAAAAATGGATGTGTTTAACG 57.307 32.000 0.00 0.00 0.00 3.18
7306 9814 4.529109 AAAATGGATGTGTTTAACGGGG 57.471 40.909 0.00 0.00 0.00 5.73
7307 9815 1.470051 ATGGATGTGTTTAACGGGGC 58.530 50.000 0.00 0.00 0.00 5.80
7311 9819 2.093341 GGATGTGTTTAACGGGGCTCTA 60.093 50.000 0.00 0.00 0.00 2.43
7313 9821 1.338389 TGTGTTTAACGGGGCTCTAGC 60.338 52.381 0.00 0.00 41.14 3.42
7315 9823 1.206371 TGTTTAACGGGGCTCTAGCTC 59.794 52.381 1.39 0.00 41.88 4.09
7320 9828 0.106167 ACGGGGCTCTAGCTCATGTA 60.106 55.000 3.89 0.00 45.20 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 3.230134 TGGCCAAAACTAATTCAGCTGT 58.770 40.909 14.67 0.00 0.00 4.40
39 40 3.988819 TGTTGGCCAAAACTAATTCAGC 58.011 40.909 22.47 3.33 0.00 4.26
40 41 5.355596 TGTTGTTGGCCAAAACTAATTCAG 58.644 37.500 28.16 0.00 34.07 3.02
131 132 5.163581 GGCTAGATTGTGTGCATCAGAATTT 60.164 40.000 11.14 9.05 39.59 1.82
136 137 2.635714 TGGCTAGATTGTGTGCATCAG 58.364 47.619 0.00 0.00 0.00 2.90
158 159 4.163458 GTCAAGGGAGAGAGAGAGAGAGTA 59.837 50.000 0.00 0.00 0.00 2.59
159 160 3.054361 GTCAAGGGAGAGAGAGAGAGAGT 60.054 52.174 0.00 0.00 0.00 3.24
160 161 3.545703 GTCAAGGGAGAGAGAGAGAGAG 58.454 54.545 0.00 0.00 0.00 3.20
161 162 2.241176 GGTCAAGGGAGAGAGAGAGAGA 59.759 54.545 0.00 0.00 0.00 3.10
162 163 2.025416 TGGTCAAGGGAGAGAGAGAGAG 60.025 54.545 0.00 0.00 0.00 3.20
163 164 1.996291 TGGTCAAGGGAGAGAGAGAGA 59.004 52.381 0.00 0.00 0.00 3.10
164 165 2.378038 CTGGTCAAGGGAGAGAGAGAG 58.622 57.143 0.00 0.00 0.00 3.20
165 166 1.006519 CCTGGTCAAGGGAGAGAGAGA 59.993 57.143 0.00 0.00 43.15 3.10
175 176 1.004918 GTGACGACCCTGGTCAAGG 60.005 63.158 16.17 3.00 45.20 3.61
201 202 2.342659 CTGGGTCATGGGGTGAGATAT 58.657 52.381 0.00 0.00 37.56 1.63
209 210 0.552848 ATACAAGCTGGGTCATGGGG 59.447 55.000 0.00 0.00 0.00 4.96
247 592 4.141937 GGGGAGCCAAAACTTTATTGATCC 60.142 45.833 0.00 0.00 34.93 3.36
251 596 3.831911 TGAGGGGAGCCAAAACTTTATTG 59.168 43.478 0.00 0.00 0.00 1.90
254 599 2.714250 TCTGAGGGGAGCCAAAACTTTA 59.286 45.455 0.00 0.00 0.00 1.85
282 627 7.064229 TCAAATACACCCCACTTCTAGTTTTT 58.936 34.615 0.00 0.00 0.00 1.94
283 628 6.607019 TCAAATACACCCCACTTCTAGTTTT 58.393 36.000 0.00 0.00 0.00 2.43
296 641 7.385778 TGCTACAAGTAATTCAAATACACCC 57.614 36.000 0.00 0.00 0.00 4.61
297 642 9.685828 TTTTGCTACAAGTAATTCAAATACACC 57.314 29.630 0.00 0.00 0.00 4.16
307 652 7.947282 TGCCTTAACTTTTGCTACAAGTAATT 58.053 30.769 0.00 0.00 33.12 1.40
310 655 8.801882 ATATGCCTTAACTTTTGCTACAAGTA 57.198 30.769 0.00 0.00 33.12 2.24
359 706 1.145531 TCCCCTGATACATGCCCAATG 59.854 52.381 0.00 0.00 42.48 2.82
362 709 0.030195 TCTCCCCTGATACATGCCCA 60.030 55.000 0.00 0.00 0.00 5.36
376 723 5.223449 TGGTTTCCGTATGATATTCTCCC 57.777 43.478 0.00 0.00 0.00 4.30
379 726 7.773224 TGAATGTTGGTTTCCGTATGATATTCT 59.227 33.333 0.00 0.00 0.00 2.40
380 727 7.925993 TGAATGTTGGTTTCCGTATGATATTC 58.074 34.615 0.00 0.00 0.00 1.75
381 728 7.873719 TGAATGTTGGTTTCCGTATGATATT 57.126 32.000 0.00 0.00 0.00 1.28
382 729 7.873719 TTGAATGTTGGTTTCCGTATGATAT 57.126 32.000 0.00 0.00 0.00 1.63
384 731 6.432783 TCTTTGAATGTTGGTTTCCGTATGAT 59.567 34.615 0.00 0.00 0.00 2.45
385 732 5.765677 TCTTTGAATGTTGGTTTCCGTATGA 59.234 36.000 0.00 0.00 0.00 2.15
386 733 6.007936 TCTTTGAATGTTGGTTTCCGTATG 57.992 37.500 0.00 0.00 0.00 2.39
387 734 6.642707 TTCTTTGAATGTTGGTTTCCGTAT 57.357 33.333 0.00 0.00 0.00 3.06
388 735 6.452494 TTTCTTTGAATGTTGGTTTCCGTA 57.548 33.333 0.00 0.00 0.00 4.02
389 736 4.993029 TTCTTTGAATGTTGGTTTCCGT 57.007 36.364 0.00 0.00 0.00 4.69
390 737 5.810074 AGTTTTCTTTGAATGTTGGTTTCCG 59.190 36.000 0.00 0.00 0.00 4.30
391 738 7.333174 TGAAGTTTTCTTTGAATGTTGGTTTCC 59.667 33.333 0.00 0.00 40.61 3.13
392 739 8.250538 TGAAGTTTTCTTTGAATGTTGGTTTC 57.749 30.769 0.00 0.00 40.61 2.78
393 740 8.667463 CATGAAGTTTTCTTTGAATGTTGGTTT 58.333 29.630 0.00 0.00 40.61 3.27
394 741 8.040132 TCATGAAGTTTTCTTTGAATGTTGGTT 58.960 29.630 0.00 0.00 40.61 3.67
395 742 7.555087 TCATGAAGTTTTCTTTGAATGTTGGT 58.445 30.769 0.00 0.00 40.61 3.67
396 743 8.422973 TTCATGAAGTTTTCTTTGAATGTTGG 57.577 30.769 3.38 0.00 40.61 3.77
399 746 8.882736 GGTTTTCATGAAGTTTTCTTTGAATGT 58.117 29.630 8.41 0.00 40.61 2.71
400 747 8.881743 TGGTTTTCATGAAGTTTTCTTTGAATG 58.118 29.630 8.41 0.00 40.61 2.67
401 748 9.617523 ATGGTTTTCATGAAGTTTTCTTTGAAT 57.382 25.926 8.41 0.00 40.61 2.57
415 762 7.821359 TGAAACTTTCAAACATGGTTTTCATGA 59.179 29.630 12.23 0.00 44.94 3.07
416 763 7.972527 TGAAACTTTCAAACATGGTTTTCATG 58.027 30.769 0.00 4.64 46.15 3.07
417 764 8.558973 TTGAAACTTTCAAACATGGTTTTCAT 57.441 26.923 13.50 0.00 45.94 2.57
418 765 7.969536 TTGAAACTTTCAAACATGGTTTTCA 57.030 28.000 13.50 0.00 45.94 2.69
454 801 8.837099 TCATCCTGTTAACATCCCATATTTTT 57.163 30.769 9.13 0.00 0.00 1.94
455 802 8.863086 CATCATCCTGTTAACATCCCATATTTT 58.137 33.333 9.13 0.00 0.00 1.82
456 803 8.006564 ACATCATCCTGTTAACATCCCATATTT 58.993 33.333 9.13 0.00 0.00 1.40
457 804 7.529555 ACATCATCCTGTTAACATCCCATATT 58.470 34.615 9.13 0.00 0.00 1.28
458 805 7.095183 ACATCATCCTGTTAACATCCCATAT 57.905 36.000 9.13 0.00 0.00 1.78
459 806 6.514012 ACATCATCCTGTTAACATCCCATA 57.486 37.500 9.13 0.00 0.00 2.74
460 807 5.393068 ACATCATCCTGTTAACATCCCAT 57.607 39.130 9.13 0.00 0.00 4.00
461 808 4.860802 ACATCATCCTGTTAACATCCCA 57.139 40.909 9.13 0.00 0.00 4.37
462 809 5.440610 AGAACATCATCCTGTTAACATCCC 58.559 41.667 9.13 0.00 39.40 3.85
463 810 8.562892 CAATAGAACATCATCCTGTTAACATCC 58.437 37.037 9.13 0.00 39.40 3.51
464 811 9.113838 ACAATAGAACATCATCCTGTTAACATC 57.886 33.333 9.13 0.32 39.40 3.06
465 812 9.113838 GACAATAGAACATCATCCTGTTAACAT 57.886 33.333 9.13 0.00 39.40 2.71
466 813 8.100164 TGACAATAGAACATCATCCTGTTAACA 58.900 33.333 8.28 8.28 39.40 2.41
467 814 8.492673 TGACAATAGAACATCATCCTGTTAAC 57.507 34.615 0.00 0.00 39.40 2.01
468 815 9.112725 CATGACAATAGAACATCATCCTGTTAA 57.887 33.333 0.00 0.00 39.40 2.01
469 816 8.267183 ACATGACAATAGAACATCATCCTGTTA 58.733 33.333 0.00 0.00 39.40 2.41
470 817 7.114754 ACATGACAATAGAACATCATCCTGTT 58.885 34.615 0.00 0.00 41.92 3.16
471 818 6.656902 ACATGACAATAGAACATCATCCTGT 58.343 36.000 0.00 0.00 29.25 4.00
472 819 7.563888 AACATGACAATAGAACATCATCCTG 57.436 36.000 0.00 0.00 29.25 3.86
473 820 9.685276 TTTAACATGACAATAGAACATCATCCT 57.315 29.630 0.00 0.00 29.25 3.24
497 844 9.036671 CCCGTAATGTGTTTTAACTTGAAATTT 57.963 29.630 0.00 0.00 0.00 1.82
498 845 8.414778 TCCCGTAATGTGTTTTAACTTGAAATT 58.585 29.630 0.00 0.00 0.00 1.82
499 846 7.942990 TCCCGTAATGTGTTTTAACTTGAAAT 58.057 30.769 0.00 0.00 0.00 2.17
500 847 7.330900 TCCCGTAATGTGTTTTAACTTGAAA 57.669 32.000 0.00 0.00 0.00 2.69
501 848 6.939132 TCCCGTAATGTGTTTTAACTTGAA 57.061 33.333 0.00 0.00 0.00 2.69
502 849 8.618702 TTATCCCGTAATGTGTTTTAACTTGA 57.381 30.769 0.00 0.00 0.00 3.02
503 850 7.483691 GCTTATCCCGTAATGTGTTTTAACTTG 59.516 37.037 0.00 0.00 0.00 3.16
504 851 7.392393 AGCTTATCCCGTAATGTGTTTTAACTT 59.608 33.333 0.00 0.00 0.00 2.66
505 852 6.882678 AGCTTATCCCGTAATGTGTTTTAACT 59.117 34.615 0.00 0.00 0.00 2.24
506 853 7.080353 AGCTTATCCCGTAATGTGTTTTAAC 57.920 36.000 0.00 0.00 0.00 2.01
507 854 8.832521 CATAGCTTATCCCGTAATGTGTTTTAA 58.167 33.333 0.00 0.00 0.00 1.52
508 855 8.205512 TCATAGCTTATCCCGTAATGTGTTTTA 58.794 33.333 0.00 0.00 0.00 1.52
509 856 7.051623 TCATAGCTTATCCCGTAATGTGTTTT 58.948 34.615 0.00 0.00 0.00 2.43
510 857 6.588204 TCATAGCTTATCCCGTAATGTGTTT 58.412 36.000 0.00 0.00 0.00 2.83
511 858 6.169557 TCATAGCTTATCCCGTAATGTGTT 57.830 37.500 0.00 0.00 0.00 3.32
512 859 5.801531 TCATAGCTTATCCCGTAATGTGT 57.198 39.130 0.00 0.00 0.00 3.72
513 860 7.490962 TTTTCATAGCTTATCCCGTAATGTG 57.509 36.000 0.00 0.00 0.00 3.21
514 861 7.990886 TCTTTTTCATAGCTTATCCCGTAATGT 59.009 33.333 0.00 0.00 0.00 2.71
515 862 8.378172 TCTTTTTCATAGCTTATCCCGTAATG 57.622 34.615 0.00 0.00 0.00 1.90
519 866 8.974060 TTTATCTTTTTCATAGCTTATCCCGT 57.026 30.769 0.00 0.00 0.00 5.28
538 885 9.261180 CGTCACTATTCATTGTGGTATTTATCT 57.739 33.333 2.20 0.00 34.90 1.98
539 886 9.042008 ACGTCACTATTCATTGTGGTATTTATC 57.958 33.333 2.20 0.00 34.90 1.75
540 887 8.958119 ACGTCACTATTCATTGTGGTATTTAT 57.042 30.769 2.20 0.00 34.90 1.40
541 888 9.304731 GTACGTCACTATTCATTGTGGTATTTA 57.695 33.333 0.00 0.00 34.90 1.40
542 889 8.038944 AGTACGTCACTATTCATTGTGGTATTT 58.961 33.333 0.00 0.00 34.98 1.40
543 890 7.491372 CAGTACGTCACTATTCATTGTGGTATT 59.509 37.037 0.00 0.00 34.98 1.89
544 891 6.978659 CAGTACGTCACTATTCATTGTGGTAT 59.021 38.462 0.00 0.00 34.98 2.73
545 892 6.071784 ACAGTACGTCACTATTCATTGTGGTA 60.072 38.462 0.00 0.00 34.98 3.25
546 893 5.168569 CAGTACGTCACTATTCATTGTGGT 58.831 41.667 0.00 0.00 34.98 4.16
547 894 5.168569 ACAGTACGTCACTATTCATTGTGG 58.831 41.667 0.00 0.00 34.98 4.17
548 895 6.706055 AACAGTACGTCACTATTCATTGTG 57.294 37.500 0.00 0.00 34.98 3.33
549 896 6.926826 TCAAACAGTACGTCACTATTCATTGT 59.073 34.615 0.00 0.00 34.98 2.71
550 897 7.095816 TGTCAAACAGTACGTCACTATTCATTG 60.096 37.037 0.00 0.00 34.98 2.82
551 898 6.926826 TGTCAAACAGTACGTCACTATTCATT 59.073 34.615 0.00 0.00 34.98 2.57
552 899 6.365247 GTGTCAAACAGTACGTCACTATTCAT 59.635 38.462 0.00 0.00 34.98 2.57
553 900 5.688621 GTGTCAAACAGTACGTCACTATTCA 59.311 40.000 0.00 0.00 34.98 2.57
554 901 5.919141 AGTGTCAAACAGTACGTCACTATTC 59.081 40.000 0.00 0.00 34.98 1.75
555 902 5.839621 AGTGTCAAACAGTACGTCACTATT 58.160 37.500 0.00 0.00 34.98 1.73
556 903 5.449107 AGTGTCAAACAGTACGTCACTAT 57.551 39.130 0.00 0.00 34.98 2.12
557 904 4.906065 AGTGTCAAACAGTACGTCACTA 57.094 40.909 0.00 0.00 34.98 2.74
558 905 3.795623 AGTGTCAAACAGTACGTCACT 57.204 42.857 0.00 0.00 38.32 3.41
559 906 5.688621 TGAATAGTGTCAAACAGTACGTCAC 59.311 40.000 0.00 0.00 36.89 3.67
560 907 5.834169 TGAATAGTGTCAAACAGTACGTCA 58.166 37.500 0.00 2.57 36.89 4.35
561 908 6.758593 TTGAATAGTGTCAAACAGTACGTC 57.241 37.500 0.00 0.36 36.89 4.34
562 909 8.086522 AGTATTGAATAGTGTCAAACAGTACGT 58.913 33.333 0.00 0.00 40.76 3.57
563 910 8.373256 CAGTATTGAATAGTGTCAAACAGTACG 58.627 37.037 11.05 0.00 40.76 3.67
564 911 9.419297 TCAGTATTGAATAGTGTCAAACAGTAC 57.581 33.333 17.04 0.00 40.76 2.73
566 913 9.507329 AATCAGTATTGAATAGTGTCAAACAGT 57.493 29.630 17.04 0.00 40.76 3.55
579 926 9.965824 ACGAGAAAAACAAAATCAGTATTGAAT 57.034 25.926 0.00 0.00 36.78 2.57
580 927 9.232082 CACGAGAAAAACAAAATCAGTATTGAA 57.768 29.630 0.00 0.00 36.78 2.69
581 928 7.860373 CCACGAGAAAAACAAAATCAGTATTGA 59.140 33.333 0.00 0.00 37.81 2.57
582 929 7.358352 GCCACGAGAAAAACAAAATCAGTATTG 60.358 37.037 0.00 0.00 0.00 1.90
583 930 6.640907 GCCACGAGAAAAACAAAATCAGTATT 59.359 34.615 0.00 0.00 0.00 1.89
584 931 6.016276 AGCCACGAGAAAAACAAAATCAGTAT 60.016 34.615 0.00 0.00 0.00 2.12
585 932 5.298276 AGCCACGAGAAAAACAAAATCAGTA 59.702 36.000 0.00 0.00 0.00 2.74
586 933 4.097892 AGCCACGAGAAAAACAAAATCAGT 59.902 37.500 0.00 0.00 0.00 3.41
587 934 4.610945 AGCCACGAGAAAAACAAAATCAG 58.389 39.130 0.00 0.00 0.00 2.90
588 935 4.097135 TGAGCCACGAGAAAAACAAAATCA 59.903 37.500 0.00 0.00 0.00 2.57
589 936 4.441087 GTGAGCCACGAGAAAAACAAAATC 59.559 41.667 0.00 0.00 0.00 2.17
590 937 4.142271 TGTGAGCCACGAGAAAAACAAAAT 60.142 37.500 0.00 0.00 37.14 1.82
591 938 3.191581 TGTGAGCCACGAGAAAAACAAAA 59.808 39.130 0.00 0.00 37.14 2.44
592 939 2.750166 TGTGAGCCACGAGAAAAACAAA 59.250 40.909 0.00 0.00 37.14 2.83
593 940 2.360844 TGTGAGCCACGAGAAAAACAA 58.639 42.857 0.00 0.00 37.14 2.83
594 941 2.031258 TGTGAGCCACGAGAAAAACA 57.969 45.000 0.00 0.00 37.14 2.83
595 942 2.290641 ACATGTGAGCCACGAGAAAAAC 59.709 45.455 0.00 0.00 37.14 2.43
596 943 2.548057 GACATGTGAGCCACGAGAAAAA 59.452 45.455 1.15 0.00 37.14 1.94
597 944 2.143122 GACATGTGAGCCACGAGAAAA 58.857 47.619 1.15 0.00 37.14 2.29
598 945 1.069978 TGACATGTGAGCCACGAGAAA 59.930 47.619 1.15 0.00 37.14 2.52
599 946 0.678950 TGACATGTGAGCCACGAGAA 59.321 50.000 1.15 0.00 37.14 2.87
600 947 0.897621 ATGACATGTGAGCCACGAGA 59.102 50.000 1.15 0.00 37.14 4.04
601 948 2.159184 AGTATGACATGTGAGCCACGAG 60.159 50.000 1.15 0.00 37.14 4.18
602 949 1.824852 AGTATGACATGTGAGCCACGA 59.175 47.619 1.15 0.00 37.14 4.35
603 950 1.929169 CAGTATGACATGTGAGCCACG 59.071 52.381 1.15 0.00 39.69 4.94
604 951 2.977914 ACAGTATGACATGTGAGCCAC 58.022 47.619 1.15 0.00 39.69 5.01
610 957 6.732531 AGTTCAATCACAGTATGACATGTG 57.267 37.500 1.15 0.00 46.52 3.21
611 958 6.936335 TCAAGTTCAATCACAGTATGACATGT 59.064 34.615 0.00 0.00 41.24 3.21
612 959 7.368480 TCAAGTTCAATCACAGTATGACATG 57.632 36.000 0.00 0.00 41.24 3.21
613 960 7.984422 TTCAAGTTCAATCACAGTATGACAT 57.016 32.000 0.00 0.00 41.24 3.06
614 961 7.800155 TTTCAAGTTCAATCACAGTATGACA 57.200 32.000 0.00 0.00 41.24 3.58
615 962 9.683069 AAATTTCAAGTTCAATCACAGTATGAC 57.317 29.630 0.00 0.00 41.24 3.06
618 965 8.981647 GCAAAATTTCAAGTTCAATCACAGTAT 58.018 29.630 0.00 0.00 0.00 2.12
619 966 7.978414 TGCAAAATTTCAAGTTCAATCACAGTA 59.022 29.630 0.00 0.00 0.00 2.74
620 967 6.817641 TGCAAAATTTCAAGTTCAATCACAGT 59.182 30.769 0.00 0.00 0.00 3.55
621 968 7.236674 TGCAAAATTTCAAGTTCAATCACAG 57.763 32.000 0.00 0.00 0.00 3.66
622 969 6.258287 CCTGCAAAATTTCAAGTTCAATCACA 59.742 34.615 0.00 0.00 0.00 3.58
623 970 6.293027 CCCTGCAAAATTTCAAGTTCAATCAC 60.293 38.462 0.00 0.00 0.00 3.06
624 971 5.759273 CCCTGCAAAATTTCAAGTTCAATCA 59.241 36.000 0.00 0.00 0.00 2.57
625 972 5.334337 GCCCTGCAAAATTTCAAGTTCAATC 60.334 40.000 0.00 0.00 0.00 2.67
626 973 4.516321 GCCCTGCAAAATTTCAAGTTCAAT 59.484 37.500 0.00 0.00 0.00 2.57
627 974 3.876320 GCCCTGCAAAATTTCAAGTTCAA 59.124 39.130 0.00 0.00 0.00 2.69
628 975 3.118482 TGCCCTGCAAAATTTCAAGTTCA 60.118 39.130 0.00 0.00 34.76 3.18
629 976 3.465871 TGCCCTGCAAAATTTCAAGTTC 58.534 40.909 0.00 0.00 34.76 3.01
630 977 3.557228 TGCCCTGCAAAATTTCAAGTT 57.443 38.095 0.00 0.00 34.76 2.66
631 978 3.557228 TTGCCCTGCAAAATTTCAAGT 57.443 38.095 0.00 0.00 45.96 3.16
642 989 4.290459 AGGATGATATTCTATTGCCCTGCA 59.710 41.667 0.00 0.00 36.47 4.41
643 990 4.853007 AGGATGATATTCTATTGCCCTGC 58.147 43.478 0.00 0.00 0.00 4.85
644 991 6.070366 TGAGAGGATGATATTCTATTGCCCTG 60.070 42.308 0.00 0.00 0.00 4.45
645 992 6.028131 TGAGAGGATGATATTCTATTGCCCT 58.972 40.000 0.00 0.00 0.00 5.19
646 993 6.305272 TGAGAGGATGATATTCTATTGCCC 57.695 41.667 0.00 0.00 0.00 5.36
647 994 7.164122 TGTTGAGAGGATGATATTCTATTGCC 58.836 38.462 0.00 0.00 0.00 4.52
648 995 8.789825 ATGTTGAGAGGATGATATTCTATTGC 57.210 34.615 0.00 0.00 0.00 3.56
651 998 8.685427 CGAGATGTTGAGAGGATGATATTCTAT 58.315 37.037 0.00 0.00 0.00 1.98
652 999 7.667635 ACGAGATGTTGAGAGGATGATATTCTA 59.332 37.037 0.00 0.00 0.00 2.10
653 1000 6.493115 ACGAGATGTTGAGAGGATGATATTCT 59.507 38.462 0.00 0.00 0.00 2.40
654 1001 6.686630 ACGAGATGTTGAGAGGATGATATTC 58.313 40.000 0.00 0.00 0.00 1.75
655 1002 6.662865 ACGAGATGTTGAGAGGATGATATT 57.337 37.500 0.00 0.00 0.00 1.28
656 1003 7.953005 ATACGAGATGTTGAGAGGATGATAT 57.047 36.000 0.00 0.00 0.00 1.63
657 1004 7.767250 AATACGAGATGTTGAGAGGATGATA 57.233 36.000 0.00 0.00 0.00 2.15
658 1005 6.662865 AATACGAGATGTTGAGAGGATGAT 57.337 37.500 0.00 0.00 0.00 2.45
659 1006 6.471233 AAATACGAGATGTTGAGAGGATGA 57.529 37.500 0.00 0.00 0.00 2.92
660 1007 7.545362 AAAAATACGAGATGTTGAGAGGATG 57.455 36.000 0.00 0.00 0.00 3.51
696 1043 9.695884 GCAAAAATGATGTTTTAAAGTTTCGAA 57.304 25.926 0.00 0.00 0.00 3.71
697 1044 8.053072 CGCAAAAATGATGTTTTAAAGTTTCGA 58.947 29.630 0.00 0.00 0.00 3.71
698 1045 7.843686 ACGCAAAAATGATGTTTTAAAGTTTCG 59.156 29.630 0.00 0.00 0.00 3.46
699 1046 8.932963 CACGCAAAAATGATGTTTTAAAGTTTC 58.067 29.630 0.00 0.00 0.00 2.78
700 1047 7.907563 CCACGCAAAAATGATGTTTTAAAGTTT 59.092 29.630 0.00 0.00 0.00 2.66
701 1048 7.065204 ACCACGCAAAAATGATGTTTTAAAGTT 59.935 29.630 0.00 0.00 0.00 2.66
702 1049 6.536941 ACCACGCAAAAATGATGTTTTAAAGT 59.463 30.769 0.00 0.00 0.00 2.66
703 1050 6.942891 ACCACGCAAAAATGATGTTTTAAAG 58.057 32.000 0.00 0.00 0.00 1.85
704 1051 6.910536 ACCACGCAAAAATGATGTTTTAAA 57.089 29.167 0.00 0.00 0.00 1.52
705 1052 6.910536 AACCACGCAAAAATGATGTTTTAA 57.089 29.167 0.00 0.00 0.00 1.52
706 1053 6.910536 AAACCACGCAAAAATGATGTTTTA 57.089 29.167 0.00 0.00 0.00 1.52
707 1054 5.809719 AAACCACGCAAAAATGATGTTTT 57.190 30.435 0.00 0.00 0.00 2.43
708 1055 5.352569 TGAAAACCACGCAAAAATGATGTTT 59.647 32.000 0.00 0.00 0.00 2.83
709 1056 4.872691 TGAAAACCACGCAAAAATGATGTT 59.127 33.333 0.00 0.00 0.00 2.71
710 1057 4.437239 TGAAAACCACGCAAAAATGATGT 58.563 34.783 0.00 0.00 0.00 3.06
711 1058 5.594724 ATGAAAACCACGCAAAAATGATG 57.405 34.783 0.00 0.00 0.00 3.07
712 1059 4.385447 CGATGAAAACCACGCAAAAATGAT 59.615 37.500 0.00 0.00 0.00 2.45
713 1060 3.733224 CGATGAAAACCACGCAAAAATGA 59.267 39.130 0.00 0.00 0.00 2.57
714 1061 3.121058 CCGATGAAAACCACGCAAAAATG 60.121 43.478 0.00 0.00 0.00 2.32
715 1062 3.056304 CCGATGAAAACCACGCAAAAAT 58.944 40.909 0.00 0.00 0.00 1.82
716 1063 2.159226 ACCGATGAAAACCACGCAAAAA 60.159 40.909 0.00 0.00 0.00 1.94
717 1064 1.405821 ACCGATGAAAACCACGCAAAA 59.594 42.857 0.00 0.00 0.00 2.44
718 1065 1.025812 ACCGATGAAAACCACGCAAA 58.974 45.000 0.00 0.00 0.00 3.68
719 1066 1.025812 AACCGATGAAAACCACGCAA 58.974 45.000 0.00 0.00 0.00 4.85
720 1067 1.025812 AAACCGATGAAAACCACGCA 58.974 45.000 0.00 0.00 0.00 5.24
721 1068 2.048498 GAAAACCGATGAAAACCACGC 58.952 47.619 0.00 0.00 0.00 5.34
722 1069 3.040099 GTGAAAACCGATGAAAACCACG 58.960 45.455 0.00 0.00 0.00 4.94
723 1070 4.301637 AGTGAAAACCGATGAAAACCAC 57.698 40.909 0.00 0.00 0.00 4.16
724 1071 6.267070 GTTTAGTGAAAACCGATGAAAACCA 58.733 36.000 0.00 0.00 41.44 3.67
725 1072 5.397240 CGTTTAGTGAAAACCGATGAAAACC 59.603 40.000 0.00 0.00 43.90 3.27
726 1073 5.967088 ACGTTTAGTGAAAACCGATGAAAAC 59.033 36.000 0.00 0.00 43.90 2.43
727 1074 6.121613 ACGTTTAGTGAAAACCGATGAAAA 57.878 33.333 0.00 0.00 43.90 2.29
728 1075 5.738118 ACGTTTAGTGAAAACCGATGAAA 57.262 34.783 0.00 0.00 43.90 2.69
729 1076 5.503498 CAACGTTTAGTGAAAACCGATGAA 58.497 37.500 0.00 0.00 43.90 2.57
730 1077 4.024725 CCAACGTTTAGTGAAAACCGATGA 60.025 41.667 0.00 0.00 43.90 2.92
731 1078 4.215965 CCAACGTTTAGTGAAAACCGATG 58.784 43.478 0.00 0.00 43.90 3.84
732 1079 3.878699 ACCAACGTTTAGTGAAAACCGAT 59.121 39.130 0.00 0.00 43.90 4.18
733 1080 3.269178 ACCAACGTTTAGTGAAAACCGA 58.731 40.909 0.00 0.00 43.90 4.69
734 1081 3.678915 ACCAACGTTTAGTGAAAACCG 57.321 42.857 0.00 0.00 43.90 4.44
735 1082 5.862860 TGAAAACCAACGTTTAGTGAAAACC 59.137 36.000 0.00 0.00 43.90 3.27
736 1083 6.931243 TGAAAACCAACGTTTAGTGAAAAC 57.069 33.333 0.00 0.00 41.42 2.43
737 1084 9.239002 CATATGAAAACCAACGTTTAGTGAAAA 57.761 29.630 0.00 0.00 41.42 2.29
738 1085 8.622157 TCATATGAAAACCAACGTTTAGTGAAA 58.378 29.630 1.98 0.00 41.42 2.69
739 1086 8.155821 TCATATGAAAACCAACGTTTAGTGAA 57.844 30.769 1.98 0.00 41.42 3.18
740 1087 7.731882 TCATATGAAAACCAACGTTTAGTGA 57.268 32.000 1.98 0.00 41.42 3.41
741 1088 8.020819 ACATCATATGAAAACCAACGTTTAGTG 58.979 33.333 9.99 0.08 41.42 2.74
742 1089 8.106247 ACATCATATGAAAACCAACGTTTAGT 57.894 30.769 9.99 0.00 41.42 2.24
743 1090 8.964420 AACATCATATGAAAACCAACGTTTAG 57.036 30.769 9.99 0.00 41.42 1.85
744 1091 9.400638 GAAACATCATATGAAAACCAACGTTTA 57.599 29.630 9.99 0.00 41.42 2.01
745 1092 7.383843 GGAAACATCATATGAAAACCAACGTTT 59.616 33.333 9.99 8.91 44.20 3.60
746 1093 6.866248 GGAAACATCATATGAAAACCAACGTT 59.134 34.615 9.99 0.00 0.00 3.99
747 1094 6.386654 GGAAACATCATATGAAAACCAACGT 58.613 36.000 9.99 0.00 0.00 3.99
748 1095 5.804979 GGGAAACATCATATGAAAACCAACG 59.195 40.000 9.99 0.00 0.00 4.10
749 1096 6.070824 AGGGGAAACATCATATGAAAACCAAC 60.071 38.462 9.99 6.57 0.00 3.77
750 1097 6.022315 AGGGGAAACATCATATGAAAACCAA 58.978 36.000 9.99 0.00 0.00 3.67
751 1098 5.588845 AGGGGAAACATCATATGAAAACCA 58.411 37.500 9.99 0.00 0.00 3.67
752 1099 6.544928 AAGGGGAAACATCATATGAAAACC 57.455 37.500 9.99 8.93 0.00 3.27
753 1100 8.846943 AAAAAGGGGAAACATCATATGAAAAC 57.153 30.769 9.99 0.46 0.00 2.43
754 1101 8.879227 AGAAAAAGGGGAAACATCATATGAAAA 58.121 29.630 9.99 0.00 0.00 2.29
755 1102 8.434589 AGAAAAAGGGGAAACATCATATGAAA 57.565 30.769 9.99 0.00 0.00 2.69
756 1103 8.434589 AAGAAAAAGGGGAAACATCATATGAA 57.565 30.769 9.99 0.00 0.00 2.57
757 1104 8.434589 AAAGAAAAAGGGGAAACATCATATGA 57.565 30.769 8.10 8.10 0.00 2.15
758 1105 9.154847 GAAAAGAAAAAGGGGAAACATCATATG 57.845 33.333 0.00 0.00 0.00 1.78
759 1106 8.321353 GGAAAAGAAAAAGGGGAAACATCATAT 58.679 33.333 0.00 0.00 0.00 1.78
760 1107 7.291182 TGGAAAAGAAAAAGGGGAAACATCATA 59.709 33.333 0.00 0.00 0.00 2.15
761 1108 6.101005 TGGAAAAGAAAAAGGGGAAACATCAT 59.899 34.615 0.00 0.00 0.00 2.45
762 1109 5.426833 TGGAAAAGAAAAAGGGGAAACATCA 59.573 36.000 0.00 0.00 0.00 3.07
763 1110 5.924356 TGGAAAAGAAAAAGGGGAAACATC 58.076 37.500 0.00 0.00 0.00 3.06
764 1111 5.966853 TGGAAAAGAAAAAGGGGAAACAT 57.033 34.783 0.00 0.00 0.00 2.71
765 1112 5.485708 TCTTGGAAAAGAAAAAGGGGAAACA 59.514 36.000 0.00 0.00 0.00 2.83
766 1113 5.984725 TCTTGGAAAAGAAAAAGGGGAAAC 58.015 37.500 0.00 0.00 0.00 2.78
767 1114 6.385467 TCATCTTGGAAAAGAAAAAGGGGAAA 59.615 34.615 0.00 0.00 31.77 3.13
768 1115 5.902431 TCATCTTGGAAAAGAAAAAGGGGAA 59.098 36.000 0.00 0.00 31.77 3.97
769 1116 5.304357 GTCATCTTGGAAAAGAAAAAGGGGA 59.696 40.000 0.00 0.00 31.77 4.81
770 1117 5.511373 GGTCATCTTGGAAAAGAAAAAGGGG 60.511 44.000 0.00 0.00 31.77 4.79
771 1118 5.305386 AGGTCATCTTGGAAAAGAAAAAGGG 59.695 40.000 0.00 0.00 31.77 3.95
772 1119 6.410942 AGGTCATCTTGGAAAAGAAAAAGG 57.589 37.500 0.00 0.00 31.77 3.11
773 1120 9.987272 ATTTAGGTCATCTTGGAAAAGAAAAAG 57.013 29.630 0.00 0.00 31.77 2.27
779 1126 6.209391 ACCACATTTAGGTCATCTTGGAAAAG 59.791 38.462 0.00 0.00 32.90 2.27
780 1127 6.015519 CACCACATTTAGGTCATCTTGGAAAA 60.016 38.462 0.00 0.00 37.23 2.29
788 1135 5.938125 ACTGTAACACCACATTTAGGTCATC 59.062 40.000 0.00 0.00 37.23 2.92
797 1144 3.892284 TGGTTGACTGTAACACCACATT 58.108 40.909 2.00 0.00 32.22 2.71
799 1146 3.351794 TTGGTTGACTGTAACACCACA 57.648 42.857 5.04 0.00 32.22 4.17
836 1202 2.033602 GGGAGGGGTCGGTGTTTG 59.966 66.667 0.00 0.00 0.00 2.93
872 1239 1.984321 GACACGAGTCGAGGCTCTCC 61.984 65.000 21.50 2.47 34.60 3.71
874 1241 1.022451 GAGACACGAGTCGAGGCTCT 61.022 60.000 31.08 17.97 46.15 4.09
1250 1618 4.223477 CGAAAAGGATACCCCCGGATAATA 59.777 45.833 0.73 0.00 34.66 0.98
1495 1882 4.762251 GGGTATATGGGATCAACAGAAAGC 59.238 45.833 0.00 0.00 0.00 3.51
1506 1893 4.169856 TGGCTTCAAAAGGGTATATGGGAT 59.830 41.667 0.00 0.00 0.00 3.85
1519 1909 5.659440 ACTTCAGTTTTCTGGCTTCAAAA 57.341 34.783 0.00 0.00 46.94 2.44
1536 1926 2.930887 GCCTCTTGTCATGCGTACTTCA 60.931 50.000 0.00 0.00 0.00 3.02
1544 1934 1.738099 ACGACGCCTCTTGTCATGC 60.738 57.895 0.00 0.00 36.11 4.06
1703 2094 5.830000 ACAAAACCAAGTTCTGAGGTAAC 57.170 39.130 0.00 0.00 34.63 2.50
1757 2148 6.608610 ACTTAATCCGCAACACAAGAAATAC 58.391 36.000 0.00 0.00 0.00 1.89
1841 2232 8.934507 ACAAGAGAAATAAGTAGATGTGTAGC 57.065 34.615 0.00 0.00 0.00 3.58
1902 2293 2.263741 GCAACCACAGAGCACCCTG 61.264 63.158 0.00 0.00 39.93 4.45
1924 2315 2.616842 CGACCCACCTTAAATACCATGC 59.383 50.000 0.00 0.00 0.00 4.06
1926 2317 2.422377 GGCGACCCACCTTAAATACCAT 60.422 50.000 0.00 0.00 0.00 3.55
1929 2320 2.704464 AGGCGACCCACCTTAAATAC 57.296 50.000 0.00 0.00 31.87 1.89
1936 2327 3.400054 GGCTAAGGCGACCCACCT 61.400 66.667 0.00 0.00 40.02 4.00
1944 2335 0.749649 ACAGAGAGATGGCTAAGGCG 59.250 55.000 0.00 0.00 39.81 5.52
1956 2492 4.627467 CGTAGTTCATTCCCAAACAGAGAG 59.373 45.833 0.00 0.00 0.00 3.20
2154 2696 7.993183 ACCGTTATTGAGAATAATCATCTTGGT 59.007 33.333 0.00 0.00 35.92 3.67
2322 3600 0.620556 CCTATGCACAACCCCACTCT 59.379 55.000 0.00 0.00 0.00 3.24
2988 4268 5.221925 ACAGGTACAAATGACATGGAGAAGT 60.222 40.000 0.00 0.00 32.98 3.01
3169 4449 5.368256 CTGAGGACAGAAGACAAAAATGG 57.632 43.478 0.00 0.00 46.03 3.16
3263 4736 1.298859 CCACTCAAGCACCGCCTTAC 61.299 60.000 0.00 0.00 0.00 2.34
3419 4892 7.385478 TCAAAAACATGATCATGGACAACATTG 59.615 33.333 33.31 25.05 42.91 2.82
3651 5124 8.394121 GTCCTCAAGATTTATCTCACATGAAAC 58.606 37.037 0.00 0.00 35.76 2.78
3660 5133 8.329203 ACAAAACTGTCCTCAAGATTTATCTC 57.671 34.615 0.00 0.00 35.76 2.75
3734 5367 4.020928 TCGTCCTATTTGGTAGCACTTTCA 60.021 41.667 0.00 0.00 37.07 2.69
3741 5374 3.131396 CACCATCGTCCTATTTGGTAGC 58.869 50.000 0.00 0.00 40.44 3.58
3742 5375 4.402056 ACACCATCGTCCTATTTGGTAG 57.598 45.455 0.00 0.00 40.44 3.18
3745 5378 4.380444 CCAAAACACCATCGTCCTATTTGG 60.380 45.833 0.00 0.00 39.47 3.28
3755 5388 0.318614 GGCACACCAAAACACCATCG 60.319 55.000 0.00 0.00 35.26 3.84
3773 5406 1.052124 TATTACTGCTCACCCGGGGG 61.052 60.000 27.92 24.30 42.03 5.40
3774 5407 0.834612 TTATTACTGCTCACCCGGGG 59.165 55.000 27.92 12.73 0.00 5.73
3843 5478 6.291585 CGGTTAGAAGACAAAAACATGTTTGC 60.292 38.462 23.93 13.54 41.33 3.68
3855 5490 0.249531 TGCACGCGGTTAGAAGACAA 60.250 50.000 12.47 0.00 0.00 3.18
3902 5537 4.922206 ACAGATGTTCTTTTGCCCAGATA 58.078 39.130 0.00 0.00 0.00 1.98
3947 5582 8.373048 TCCTTATACGCCTGTTAACATAAATG 57.627 34.615 9.13 0.00 0.00 2.32
4043 5678 4.335416 ACCAACATACCATTCTGACTTGG 58.665 43.478 4.66 4.66 39.02 3.61
4148 5784 6.803154 ACAGAGCAAACTACTGGAAAATAC 57.197 37.500 0.00 0.00 36.17 1.89
4163 5799 3.831323 TGGAATGAGGAAAACAGAGCAA 58.169 40.909 0.00 0.00 0.00 3.91
4166 5802 5.507985 GGTTGTTGGAATGAGGAAAACAGAG 60.508 44.000 0.00 0.00 32.75 3.35
4744 6381 2.411409 ACGCAAATTTTAATGCAAGGCG 59.589 40.909 10.89 10.89 46.48 5.52
4774 6411 2.577563 TCTGGGCATCCTTCTGAAATGA 59.422 45.455 6.31 0.00 0.00 2.57
4915 6553 1.525718 TAGGTTGCGTGTCGGCTACA 61.526 55.000 0.00 0.00 39.84 2.74
4937 6575 5.424121 AACATACAAGCTCAGTTGACAAC 57.576 39.130 10.47 10.47 0.00 3.32
4948 6586 7.282585 TCATGGCTCTAATTAACATACAAGCT 58.717 34.615 0.00 0.00 0.00 3.74
5014 7287 0.180171 CTGACCCATATTGCCCGACA 59.820 55.000 0.00 0.00 0.00 4.35
5091 7366 5.448496 GGTTGGTTTTTCAAGTGGAAATTGC 60.448 40.000 0.00 0.00 44.59 3.56
5155 7430 4.081642 GTGTCCAGAACAGCTCCTTATGTA 60.082 45.833 0.00 0.00 38.97 2.29
5318 7593 6.376018 GGGCAACGGCTATGGATATTTATTTA 59.624 38.462 0.00 0.00 40.87 1.40
5344 7619 4.077108 CCTAATGCAGCACATATGTCCAT 58.923 43.478 5.07 3.95 38.34 3.41
5465 7740 9.101655 GATTTGGATTAAAAGTTATGCAGCATT 57.898 29.630 14.58 0.00 0.00 3.56
5498 7773 3.507233 TGTCTTTTTCCTCACATCATGCC 59.493 43.478 0.00 0.00 0.00 4.40
5509 7784 7.169158 TCACAGTTTGAATTGTCTTTTTCCT 57.831 32.000 0.00 0.00 0.00 3.36
5548 7840 6.304356 ACAATGAATTATACGAGCATGGTG 57.696 37.500 0.00 0.00 0.00 4.17
5589 7884 5.649395 CCAAATTCCATCTACAGCTCAAGAA 59.351 40.000 0.00 0.00 0.00 2.52
5619 7914 9.607988 ACATACATCCGTTATGTCTCAAAATAA 57.392 29.630 4.09 0.00 46.15 1.40
5620 7915 9.607988 AACATACATCCGTTATGTCTCAAAATA 57.392 29.630 4.09 0.00 46.15 1.40
5633 7929 4.941263 ACATTAGCACAACATACATCCGTT 59.059 37.500 0.00 0.00 0.00 4.44
5722 8018 6.494835 ACAAGAGGAGCTTCCACAAAAATTAT 59.505 34.615 5.21 0.00 39.61 1.28
5861 8157 3.981071 TCCACTTCATCTCCGTTCAAT 57.019 42.857 0.00 0.00 0.00 2.57
5929 8225 2.037511 CCAACAGGACATTGCACCAAAT 59.962 45.455 0.00 0.00 0.00 2.32
6003 8299 6.773976 AGTTTGAATGAACAGAACTTTCCA 57.226 33.333 0.00 0.00 31.94 3.53
6006 8302 9.573133 CTACAAAGTTTGAATGAACAGAACTTT 57.427 29.630 22.23 6.68 45.93 2.66
6012 8308 6.498304 ACAGCTACAAAGTTTGAATGAACAG 58.502 36.000 22.23 7.88 31.94 3.16
6073 8369 1.001764 CAGAGTGGAATGGGCAGCA 60.002 57.895 0.00 0.00 0.00 4.41
6078 8374 7.609532 GGATAAAATAGATCAGAGTGGAATGGG 59.390 40.741 0.00 0.00 0.00 4.00
6198 8494 2.447443 AGAGCATACTTGACGACCTCA 58.553 47.619 0.00 0.00 0.00 3.86
6267 8563 6.884295 CCATGTTTCTACAAAAGAGGGTGATA 59.116 38.462 0.00 0.00 37.91 2.15
6269 8565 5.070001 CCATGTTTCTACAAAAGAGGGTGA 58.930 41.667 0.00 0.00 37.91 4.02
6274 8570 6.095377 GGAATGCCATGTTTCTACAAAAGAG 58.905 40.000 0.00 0.00 37.91 2.85
6285 8581 2.023695 AGATCTGGGGAATGCCATGTTT 60.024 45.455 0.00 0.00 35.15 2.83
6292 8590 2.703007 ACTAGACAGATCTGGGGAATGC 59.297 50.000 26.08 6.82 37.75 3.56
6342 8641 2.289195 TGAGCCTTTACCACACCTTACG 60.289 50.000 0.00 0.00 0.00 3.18
6383 8682 5.522460 CAGGAAAAATAATGCTGATTGCTGG 59.478 40.000 0.00 0.00 43.37 4.85
6467 8769 2.040412 CCCCTCTACAAAACTGGAGCTT 59.960 50.000 0.00 0.00 0.00 3.74
6529 8832 7.096436 CGTCAATGCTACATCTTACACTACATC 60.096 40.741 0.00 0.00 0.00 3.06
6648 8952 2.034558 CCAGTGAACGTTTCCTTGCAAT 59.965 45.455 0.46 0.00 0.00 3.56
6660 8964 5.728351 TGAAACTAGAAAACCAGTGAACG 57.272 39.130 0.00 0.00 0.00 3.95
6673 8978 6.149474 GGATTTTAACTGCTGCTGAAACTAGA 59.851 38.462 13.69 0.00 0.00 2.43
6722 9027 1.233285 GCATGCAGCCTATCCCTTCG 61.233 60.000 14.21 0.00 37.23 3.79
6787 9092 5.006386 CACCAAAGCTTAAGATCCTGAACT 58.994 41.667 6.67 0.00 0.00 3.01
6799 9104 0.178992 ACAGCAGGCACCAAAGCTTA 60.179 50.000 0.00 0.00 34.61 3.09
6800 9105 1.456331 ACAGCAGGCACCAAAGCTT 60.456 52.632 0.00 0.00 34.61 3.74
6811 9116 3.144506 ACTGAAGTGAATTGACAGCAGG 58.855 45.455 16.88 4.62 32.67 4.85
6832 9137 1.434188 TGGAAGGAGGCACAGAGAAA 58.566 50.000 0.00 0.00 0.00 2.52
6839 9144 3.555168 CCGTATAGAATGGAAGGAGGCAC 60.555 52.174 0.00 0.00 36.17 5.01
6860 9165 0.031994 ACAAAACATGCGCCAACTCC 59.968 50.000 4.18 0.00 0.00 3.85
6861 9166 1.522258 CAACAAAACATGCGCCAACTC 59.478 47.619 4.18 0.00 0.00 3.01
6862 9167 1.569708 CAACAAAACATGCGCCAACT 58.430 45.000 4.18 0.00 0.00 3.16
6868 9364 2.410006 CGAAATGCCAACAAAACATGCG 60.410 45.455 0.00 0.00 0.00 4.73
6878 9374 1.274798 CGCCAACACGAAATGCCAAC 61.275 55.000 0.00 0.00 34.06 3.77
6881 9377 2.804931 GCGCCAACACGAAATGCC 60.805 61.111 0.00 0.00 34.06 4.40
6882 9378 1.444212 ATGCGCCAACACGAAATGC 60.444 52.632 4.18 0.00 34.06 3.56
6883 9379 0.387112 ACATGCGCCAACACGAAATG 60.387 50.000 4.18 0.27 35.80 2.32
6884 9380 0.387112 CACATGCGCCAACACGAAAT 60.387 50.000 4.18 0.00 34.06 2.17
6885 9381 1.009108 CACATGCGCCAACACGAAA 60.009 52.632 4.18 0.00 34.06 3.46
6886 9382 2.636462 CACATGCGCCAACACGAA 59.364 55.556 4.18 0.00 34.06 3.85
6925 9424 1.213296 GAGGATTCCCAGCCCTGTTA 58.787 55.000 0.00 0.00 33.88 2.41
6933 9432 3.432890 GGAGTTAGCAAGAGGATTCCCAG 60.433 52.174 0.00 0.00 33.88 4.45
6955 9454 1.470890 ACCGGATAAACCAAATGCACG 59.529 47.619 9.46 0.00 38.90 5.34
6963 9462 4.202440 TGAACCAGTAAACCGGATAAACCA 60.202 41.667 9.46 0.00 38.90 3.67
6964 9463 4.325972 TGAACCAGTAAACCGGATAAACC 58.674 43.478 9.46 0.00 0.00 3.27
6965 9464 4.999311 ACTGAACCAGTAAACCGGATAAAC 59.001 41.667 9.46 0.00 43.46 2.01
6966 9465 5.231702 ACTGAACCAGTAAACCGGATAAA 57.768 39.130 9.46 0.00 43.46 1.40
6967 9466 4.895668 ACTGAACCAGTAAACCGGATAA 57.104 40.909 9.46 0.00 43.46 1.75
6968 9467 4.895668 AACTGAACCAGTAAACCGGATA 57.104 40.909 9.46 0.00 44.62 2.59
6969 9468 3.782656 AACTGAACCAGTAAACCGGAT 57.217 42.857 9.46 0.00 44.62 4.18
6970 9469 3.564053 AAACTGAACCAGTAAACCGGA 57.436 42.857 9.46 0.00 44.62 5.14
6971 9470 5.062558 CGTATAAACTGAACCAGTAAACCGG 59.937 44.000 0.00 0.00 44.62 5.28
6974 9473 7.425577 AACCGTATAAACTGAACCAGTAAAC 57.574 36.000 0.00 0.00 44.62 2.01
7025 9524 8.373048 TCTTTAATACCATACCGCATTTACTG 57.627 34.615 0.00 0.00 0.00 2.74
7026 9525 8.999431 CATCTTTAATACCATACCGCATTTACT 58.001 33.333 0.00 0.00 0.00 2.24
7027 9526 8.234546 CCATCTTTAATACCATACCGCATTTAC 58.765 37.037 0.00 0.00 0.00 2.01
7033 9532 6.435428 CAAACCATCTTTAATACCATACCGC 58.565 40.000 0.00 0.00 0.00 5.68
7037 9536 9.535170 TGAAACCAAACCATCTTTAATACCATA 57.465 29.630 0.00 0.00 0.00 2.74
7119 9623 6.609907 TTACACATCATTTTCAAATTCGCG 57.390 33.333 0.00 0.00 0.00 5.87
7212 9719 5.516044 ACCATCTAATCCATGCATGCATAT 58.484 37.500 31.73 20.22 34.91 1.78
7229 9736 5.928976 TGCTAAGCACATACATAACCATCT 58.071 37.500 0.00 0.00 31.71 2.90
7303 9811 4.891992 TTTATACATGAGCTAGAGCCCC 57.108 45.455 0.00 0.00 43.38 5.80


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.