Multiple sequence alignment - TraesCS7D01G399900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G399900 chr7D 100.000 6850 0 0 1317 8166 516032856 516026007 0.000000e+00 12650.0
1 TraesCS7D01G399900 chr7D 100.000 1059 0 0 1 1059 516034172 516033114 0.000000e+00 1956.0
2 TraesCS7D01G399900 chr7D 91.304 138 10 2 6905 7042 46718000 46717865 3.890000e-43 187.0
3 TraesCS7D01G399900 chr7D 94.286 105 5 1 3891 3994 516030187 516030083 8.480000e-35 159.0
4 TraesCS7D01G399900 chr7D 94.286 105 5 1 3986 4090 516030282 516030179 8.480000e-35 159.0
5 TraesCS7D01G399900 chr7D 93.827 81 4 1 6215 6294 436961868 436961948 4.000000e-23 121.0
6 TraesCS7D01G399900 chr7D 92.593 81 5 1 6215 6295 529906100 529906179 1.860000e-21 115.0
7 TraesCS7D01G399900 chr7D 82.609 69 10 2 6547 6613 478795356 478795288 8.850000e-05 60.2
8 TraesCS7D01G399900 chr7D 97.059 34 1 0 5092 5125 125836447 125836414 3.180000e-04 58.4
9 TraesCS7D01G399900 chr7D 96.970 33 1 0 5092 5124 125836519 125836551 1.000000e-03 56.5
10 TraesCS7D01G399900 chr7D 89.362 47 2 3 5089 5132 504668222 504668176 1.000000e-03 56.5
11 TraesCS7D01G399900 chr7D 87.234 47 5 1 5092 5138 570160647 570160602 1.500000e-02 52.8
12 TraesCS7D01G399900 chr7A 94.799 4249 136 31 1326 5542 589762788 589758593 0.000000e+00 6543.0
13 TraesCS7D01G399900 chr7A 91.566 1079 40 23 1 1050 589764159 589763103 0.000000e+00 1441.0
14 TraesCS7D01G399900 chr7A 92.424 858 44 14 7039 7887 589756877 589756032 0.000000e+00 1205.0
15 TraesCS7D01G399900 chr7A 91.872 689 35 6 5543 6218 589758345 589757665 0.000000e+00 942.0
16 TraesCS7D01G399900 chr7A 97.133 279 8 0 7888 8166 589756062 589755784 9.590000e-129 472.0
17 TraesCS7D01G399900 chr7A 96.000 275 9 1 6215 6487 589757614 589757340 5.810000e-121 446.0
18 TraesCS7D01G399900 chr7A 92.013 313 10 7 6598 6908 589757179 589756880 7.580000e-115 425.0
19 TraesCS7D01G399900 chr7A 95.238 105 4 1 3986 4090 589760245 589760142 1.820000e-36 165.0
20 TraesCS7D01G399900 chr7A 93.333 105 6 1 3891 3994 589760150 589760046 3.950000e-33 154.0
21 TraesCS7D01G399900 chr7A 92.500 80 6 0 6215 6294 462978660 462978739 1.860000e-21 115.0
22 TraesCS7D01G399900 chr7B 96.834 1958 58 3 3069 5023 548386547 548384591 0.000000e+00 3269.0
23 TraesCS7D01G399900 chr7B 92.722 1690 82 23 1326 3012 548388205 548386554 0.000000e+00 2401.0
24 TraesCS7D01G399900 chr7B 83.961 1116 82 52 7035 8111 548382610 548381553 0.000000e+00 979.0
25 TraesCS7D01G399900 chr7B 93.575 607 23 9 460 1059 548388899 548388302 0.000000e+00 891.0
26 TraesCS7D01G399900 chr7B 88.095 672 55 11 5546 6196 548383793 548383126 0.000000e+00 774.0
27 TraesCS7D01G399900 chr7B 91.968 249 13 4 5118 5366 548384593 548384352 7.850000e-90 342.0
28 TraesCS7D01G399900 chr7B 84.472 322 28 8 6587 6905 548382918 548382616 1.720000e-76 298.0
29 TraesCS7D01G399900 chr7B 88.034 234 16 4 6293 6523 548383127 548382903 4.860000e-67 267.0
30 TraesCS7D01G399900 chr7B 92.571 175 12 1 5364 5538 548384249 548384076 4.890000e-62 250.0
31 TraesCS7D01G399900 chr7B 88.517 209 19 4 91 296 548389364 548389158 1.760000e-61 248.0
32 TraesCS7D01G399900 chr7B 95.238 105 4 1 3986 4090 548385725 548385622 1.820000e-36 165.0
33 TraesCS7D01G399900 chr7B 94.286 105 5 1 3891 3994 548385630 548385526 8.480000e-35 159.0
34 TraesCS7D01G399900 chr7B 93.827 81 4 1 6215 6294 453623363 453623443 4.000000e-23 121.0
35 TraesCS7D01G399900 chr7B 92.537 67 4 1 1 67 548389421 548389356 2.430000e-15 95.3
36 TraesCS7D01G399900 chr7B 92.308 65 4 1 5026 5090 457403476 457403413 3.140000e-14 91.6
37 TraesCS7D01G399900 chr7B 85.714 77 4 2 355 430 548389022 548388952 3.160000e-09 75.0
38 TraesCS7D01G399900 chr4D 95.082 122 6 0 6904 7025 27156416 27156537 8.360000e-45 193.0
39 TraesCS7D01G399900 chr4D 95.122 41 2 0 5026 5066 366693474 366693434 1.900000e-06 65.8
40 TraesCS7D01G399900 chr4D 92.683 41 3 0 5026 5066 439689621 439689661 8.850000e-05 60.2
41 TraesCS7D01G399900 chr4D 100.000 30 0 0 5031 5060 48467586 48467615 1.000000e-03 56.5
42 TraesCS7D01G399900 chr4D 100.000 29 0 0 5092 5120 366693452 366693480 4.000000e-03 54.7
43 TraesCS7D01G399900 chr4A 95.763 118 5 0 6908 7025 589013492 589013609 3.010000e-44 191.0
44 TraesCS7D01G399900 chr2B 94.309 123 7 0 6904 7026 518048446 518048324 1.080000e-43 189.0
45 TraesCS7D01G399900 chr1A 93.651 126 8 0 6908 7033 188148889 188148764 1.080000e-43 189.0
46 TraesCS7D01G399900 chr1A 91.566 83 7 0 6215 6297 385659214 385659132 1.860000e-21 115.0
47 TraesCS7D01G399900 chr1A 93.333 45 3 0 5018 5062 457952003 457952047 5.290000e-07 67.6
48 TraesCS7D01G399900 chr1A 94.872 39 2 0 5028 5066 20155411 20155373 2.460000e-05 62.1
49 TraesCS7D01G399900 chr1A 92.683 41 3 0 5026 5066 282703827 282703787 8.850000e-05 60.2
50 TraesCS7D01G399900 chr1A 94.444 36 2 0 5027 5062 282703429 282703464 1.000000e-03 56.5
51 TraesCS7D01G399900 chr1A 100.000 30 0 0 5092 5121 457952105 457952134 1.000000e-03 56.5
52 TraesCS7D01G399900 chr1A 100.000 30 0 0 5092 5121 508273251 508273280 1.000000e-03 56.5
53 TraesCS7D01G399900 chr1A 100.000 30 0 0 5092 5121 508332183 508332212 1.000000e-03 56.5
54 TraesCS7D01G399900 chr6D 93.023 129 7 2 6904 7031 17055124 17054997 3.890000e-43 187.0
55 TraesCS7D01G399900 chr6D 100.000 30 0 0 5092 5121 401201574 401201545 1.000000e-03 56.5
56 TraesCS7D01G399900 chr6D 100.000 28 0 0 5092 5119 2065622 2065649 1.500000e-02 52.8
57 TraesCS7D01G399900 chr6D 96.774 31 1 0 5092 5122 62116162 62116132 1.500000e-02 52.8
58 TraesCS7D01G399900 chr6D 100.000 28 0 0 5092 5119 354422724 354422697 1.500000e-02 52.8
59 TraesCS7D01G399900 chr6B 92.424 132 8 1 6904 7033 293966293 293966162 3.890000e-43 187.0
60 TraesCS7D01G399900 chr6B 95.122 41 2 0 5026 5066 672460470 672460510 1.900000e-06 65.8
61 TraesCS7D01G399900 chr3A 94.262 122 7 0 6908 7029 108378874 108378995 3.890000e-43 187.0
62 TraesCS7D01G399900 chr3A 91.860 86 6 1 6215 6299 466791081 466791166 1.440000e-22 119.0
63 TraesCS7D01G399900 chr2D 92.800 125 9 0 6905 7029 443245928 443246052 1.810000e-41 182.0
64 TraesCS7D01G399900 chr2D 81.707 82 8 1 5017 5091 591309940 591310021 2.460000e-05 62.1
65 TraesCS7D01G399900 chr5D 91.566 83 7 0 6215 6297 339356938 339357020 1.860000e-21 115.0
66 TraesCS7D01G399900 chr5D 92.157 51 3 1 6547 6597 369429186 369429235 4.090000e-08 71.3
67 TraesCS7D01G399900 chr5D 91.489 47 3 1 5017 5062 11314085 11314131 6.840000e-06 63.9
68 TraesCS7D01G399900 chr1D 92.500 80 6 0 6215 6294 97132549 97132470 1.860000e-21 115.0
69 TraesCS7D01G399900 chr1D 86.154 65 3 5 6547 6611 478256495 478256437 1.900000e-06 65.8
70 TraesCS7D01G399900 chr1D 97.297 37 1 0 5026 5062 44639063 44639027 6.840000e-06 63.9
71 TraesCS7D01G399900 chr1D 100.000 29 0 0 5092 5120 44639041 44639069 4.000000e-03 54.7
72 TraesCS7D01G399900 chr5B 92.308 52 2 2 6546 6596 580676716 580676666 1.140000e-08 73.1
73 TraesCS7D01G399900 chr5B 89.286 56 1 4 6547 6601 455737564 455737615 1.900000e-06 65.8
74 TraesCS7D01G399900 chr5B 87.719 57 6 1 6551 6607 603456573 603456518 1.900000e-06 65.8
75 TraesCS7D01G399900 chr5B 97.143 35 1 0 5057 5091 604717371 604717405 8.850000e-05 60.2
76 TraesCS7D01G399900 chr1B 97.619 42 1 0 5021 5062 48740467 48740508 1.140000e-08 73.1
77 TraesCS7D01G399900 chr3D 91.667 48 4 0 5019 5066 225859587 225859634 5.290000e-07 67.6
78 TraesCS7D01G399900 chr3B 89.091 55 4 2 6547 6600 563965260 563965313 5.290000e-07 67.6
79 TraesCS7D01G399900 chr3B 89.091 55 4 2 6547 6600 563981543 563981596 5.290000e-07 67.6
80 TraesCS7D01G399900 chr3B 89.091 55 4 2 6547 6600 563999106 563999159 5.290000e-07 67.6
81 TraesCS7D01G399900 chr4B 95.122 41 2 0 5026 5066 659336501 659336541 1.900000e-06 65.8
82 TraesCS7D01G399900 chr5A 93.023 43 3 0 5020 5062 369531768 369531810 6.840000e-06 63.9
83 TraesCS7D01G399900 chr6A 100.000 31 0 0 5095 5125 531028513 531028543 3.180000e-04 58.4
84 TraesCS7D01G399900 chr6A 100.000 29 0 0 5092 5120 185134794 185134822 4.000000e-03 54.7
85 TraesCS7D01G399900 chrUn 100.000 30 0 0 5092 5121 346709915 346709944 1.000000e-03 56.5
86 TraesCS7D01G399900 chrUn 100.000 30 0 0 5092 5121 373706572 373706543 1.000000e-03 56.5
87 TraesCS7D01G399900 chrUn 100.000 30 0 0 5092 5121 373708438 373708409 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G399900 chr7D 516026007 516034172 8165 True 3731.000000 12650 97.143000 1 8166 4 chr7D.!!$R6 8165
1 TraesCS7D01G399900 chr7A 589755784 589764159 8375 True 1310.333333 6543 93.819778 1 8166 9 chr7A.!!$R1 8165
2 TraesCS7D01G399900 chr7B 548381553 548389421 7868 True 729.521429 3269 90.608857 1 8111 14 chr7B.!!$R2 8110

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
571 690 0.034337 TCGAGTAAACTGCCACCACC 59.966 55.000 0.00 0.0 0.00 4.61 F
572 691 0.034896 CGAGTAAACTGCCACCACCT 59.965 55.000 0.00 0.0 0.00 4.00 F
681 801 0.537188 TTCTCTTCCCACCTCATCGC 59.463 55.000 0.00 0.0 0.00 4.58 F
2441 2639 0.679505 CGGTCACCCTGAGTTCTGAA 59.320 55.000 0.00 0.0 0.00 3.02 F
3834 4040 0.108233 CTTCTGCTCCTGCTCCTGAC 60.108 60.000 0.00 0.0 40.48 3.51 F
4139 4345 0.670162 GCTGTGCTTGCCTCTTCAAA 59.330 50.000 0.00 0.0 0.00 2.69 F
4266 4472 1.134580 GCTGAGCAGGCTGACAAGATA 60.135 52.381 20.86 0.0 0.00 1.98 F
4268 4474 1.483827 TGAGCAGGCTGACAAGATAGG 59.516 52.381 20.86 0.0 0.00 2.57 F
6035 6662 0.887836 CAGAACAGCAGCAGCCTCAA 60.888 55.000 0.00 0.0 43.56 3.02 F
6878 7623 0.756903 GGCGGCCTATCTTTGTCCTA 59.243 55.000 12.87 0.0 0.00 2.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2544 2742 0.595095 GCAAGCAAACAGACTCCAGG 59.405 55.000 0.00 0.00 0.00 4.45 R
2695 2894 4.202243 ACAGTTGGTAGCAACCTAACGTAA 60.202 41.667 29.11 0.00 46.91 3.18 R
2748 2947 9.716531 TTCATCTCAACAGATAGCCATAATTAG 57.283 33.333 0.00 0.00 37.25 1.73 R
4139 4345 1.299976 GGCTCGTTCCCCTGAATGT 59.700 57.895 0.00 0.00 38.42 2.71 R
5185 5394 1.411977 CTCTCCAGATGAGTTCGGCAT 59.588 52.381 0.00 0.00 42.12 4.40 R
6018 6645 1.168407 TGTTGAGGCTGCTGCTGTTC 61.168 55.000 15.64 11.01 39.59 3.18 R
6035 6662 1.271934 TGCTGCTGTTGTTGTTGTTGT 59.728 42.857 0.00 0.00 0.00 3.32 R
6179 6813 2.504175 GGGAGTAGATGTTTACTGGCCA 59.496 50.000 4.71 4.71 34.13 5.36 R
6911 7656 0.038310 AAGCTTTTTCGGAGGGAGGG 59.962 55.000 0.00 0.00 0.00 4.30 R
8128 8941 1.003233 AGACGATGGGGTGAGTTTTCC 59.997 52.381 0.00 0.00 0.00 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 34 1.398390 CGGAATCAAGCCTCCTTTTCG 59.602 52.381 0.00 0.00 0.00 3.46
42 44 0.606401 CTCCTTTTCGCCTGGCTTGA 60.606 55.000 17.92 4.49 0.00 3.02
220 227 8.968242 GTTACTTCCATGCTAAGTTTCTTTTTG 58.032 33.333 14.57 0.00 38.18 2.44
223 230 5.288804 TCCATGCTAAGTTTCTTTTTGTGC 58.711 37.500 0.00 0.00 0.00 4.57
244 251 0.924090 CGCTAAGCTTCGATCACCAC 59.076 55.000 0.00 0.00 0.00 4.16
245 252 1.735700 CGCTAAGCTTCGATCACCACA 60.736 52.381 0.00 0.00 0.00 4.17
246 253 1.661112 GCTAAGCTTCGATCACCACAC 59.339 52.381 0.00 0.00 0.00 3.82
249 256 0.615331 AGCTTCGATCACCACACCAT 59.385 50.000 0.00 0.00 0.00 3.55
250 257 0.729116 GCTTCGATCACCACACCATG 59.271 55.000 0.00 0.00 0.00 3.66
393 487 5.176958 CAGGAGTCGTTGGTTTGTTAGTTAG 59.823 44.000 0.00 0.00 0.00 2.34
394 488 5.052481 GGAGTCGTTGGTTTGTTAGTTAGT 58.948 41.667 0.00 0.00 0.00 2.24
395 489 5.525012 GGAGTCGTTGGTTTGTTAGTTAGTT 59.475 40.000 0.00 0.00 0.00 2.24
396 490 6.701400 GGAGTCGTTGGTTTGTTAGTTAGTTA 59.299 38.462 0.00 0.00 0.00 2.24
397 491 7.386025 GGAGTCGTTGGTTTGTTAGTTAGTTAT 59.614 37.037 0.00 0.00 0.00 1.89
398 492 9.410556 GAGTCGTTGGTTTGTTAGTTAGTTATA 57.589 33.333 0.00 0.00 0.00 0.98
420 514 3.181504 ACAACTTGCAACCGTCTTTACAC 60.182 43.478 0.00 0.00 0.00 2.90
434 528 6.442952 CGTCTTTACACAAAATCCAAATCCA 58.557 36.000 0.00 0.00 0.00 3.41
436 530 7.598493 CGTCTTTACACAAAATCCAAATCCAAT 59.402 33.333 0.00 0.00 0.00 3.16
437 531 9.921637 GTCTTTACACAAAATCCAAATCCAATA 57.078 29.630 0.00 0.00 0.00 1.90
438 532 9.921637 TCTTTACACAAAATCCAAATCCAATAC 57.078 29.630 0.00 0.00 0.00 1.89
439 533 9.927668 CTTTACACAAAATCCAAATCCAATACT 57.072 29.630 0.00 0.00 0.00 2.12
442 536 8.650143 ACACAAAATCCAAATCCAATACTACT 57.350 30.769 0.00 0.00 0.00 2.57
444 538 8.190784 CACAAAATCCAAATCCAATACTACTCC 58.809 37.037 0.00 0.00 0.00 3.85
446 540 6.590656 AATCCAAATCCAATACTACTCCCA 57.409 37.500 0.00 0.00 0.00 4.37
508 627 2.271800 GGAAGACACCAGAATAGCACG 58.728 52.381 0.00 0.00 0.00 5.34
539 658 4.080526 ACAAGGATCCTATTACGGCAAACT 60.081 41.667 16.55 0.00 0.00 2.66
571 690 0.034337 TCGAGTAAACTGCCACCACC 59.966 55.000 0.00 0.00 0.00 4.61
572 691 0.034896 CGAGTAAACTGCCACCACCT 59.965 55.000 0.00 0.00 0.00 4.00
649 768 2.449322 CCCCCTGGATCCTCCCTG 60.449 72.222 14.23 0.00 35.03 4.45
650 769 3.174265 CCCCTGGATCCTCCCTGC 61.174 72.222 14.23 0.00 35.03 4.85
652 771 2.040043 CCTGGATCCTCCCTGCCT 60.040 66.667 14.23 0.00 35.03 4.75
653 772 2.146061 CCTGGATCCTCCCTGCCTC 61.146 68.421 14.23 0.00 35.03 4.70
654 773 2.444706 TGGATCCTCCCTGCCTCG 60.445 66.667 14.23 0.00 35.03 4.63
663 782 4.394712 CCTGCCTCGGCCGTTCTT 62.395 66.667 27.15 0.00 41.09 2.52
681 801 0.537188 TTCTCTTCCCACCTCATCGC 59.463 55.000 0.00 0.00 0.00 4.58
697 819 4.284550 GCCCAACCCAGCCAGACA 62.285 66.667 0.00 0.00 0.00 3.41
698 820 2.034687 CCCAACCCAGCCAGACAG 59.965 66.667 0.00 0.00 0.00 3.51
699 821 2.528818 CCCAACCCAGCCAGACAGA 61.529 63.158 0.00 0.00 0.00 3.41
700 822 1.302832 CCAACCCAGCCAGACAGAC 60.303 63.158 0.00 0.00 0.00 3.51
701 823 1.669115 CAACCCAGCCAGACAGACG 60.669 63.158 0.00 0.00 0.00 4.18
1558 1734 2.203070 GATCAGCATTCCCGCCGT 60.203 61.111 0.00 0.00 0.00 5.68
1609 1788 3.161866 TCTGAAAATAGGGTTGGGTTGC 58.838 45.455 0.00 0.00 0.00 4.17
1728 1907 7.148590 CGATGTGAATGTCATGTTCAGAAAGTA 60.149 37.037 0.00 0.00 36.35 2.24
1733 1912 6.861065 ATGTCATGTTCAGAAAGTACGTTT 57.139 33.333 0.00 0.00 0.00 3.60
1749 1928 3.815809 ACGTTTGAGGTTTCCAGATTGA 58.184 40.909 0.00 0.00 0.00 2.57
1771 1950 1.063469 GGTCGATGTTTTATGGGTGCG 59.937 52.381 0.00 0.00 0.00 5.34
1772 1951 2.004017 GTCGATGTTTTATGGGTGCGA 58.996 47.619 0.00 0.00 0.00 5.10
1782 1973 3.649986 GGGTGCGAGTGTGTGTGC 61.650 66.667 0.00 0.00 0.00 4.57
1783 1974 2.894879 GGTGCGAGTGTGTGTGCA 60.895 61.111 0.00 0.00 34.44 4.57
1787 1978 2.267426 GTGCGAGTGTGTGTGCATATA 58.733 47.619 0.00 0.00 39.85 0.86
1796 1987 5.413523 AGTGTGTGTGCATATATATGGCATG 59.586 40.000 21.50 1.81 34.32 4.06
1800 1991 6.818142 GTGTGTGCATATATATGGCATGTAGA 59.182 38.462 21.50 5.55 34.32 2.59
1801 1992 7.496920 GTGTGTGCATATATATGGCATGTAGAT 59.503 37.037 21.50 7.94 34.32 1.98
1934 2125 5.776173 AGTCGATCCTCAGGTATTACTTG 57.224 43.478 0.00 0.00 0.00 3.16
2053 2244 4.640201 TGCTTGGTACTTATTGAGATTGGC 59.360 41.667 0.00 0.00 0.00 4.52
2309 2507 8.927675 ATACGCATATGGGGAATACTTAAAAA 57.072 30.769 22.28 0.00 0.00 1.94
2310 2508 7.272037 ACGCATATGGGGAATACTTAAAAAG 57.728 36.000 22.28 0.00 0.00 2.27
2311 2509 6.831868 ACGCATATGGGGAATACTTAAAAAGT 59.168 34.615 22.28 0.00 45.40 2.66
2312 2510 7.340999 ACGCATATGGGGAATACTTAAAAAGTT 59.659 33.333 22.28 0.00 42.81 2.66
2313 2511 8.842280 CGCATATGGGGAATACTTAAAAAGTTA 58.158 33.333 11.82 0.00 42.81 2.24
2376 2574 7.956127 GCAATGTCTTTTTGCTTCCGAAGGT 62.956 44.000 10.18 0.00 46.75 3.50
2427 2625 9.675464 ACTATACCATCTTTAAAATTTCGGTCA 57.325 29.630 0.00 0.00 0.00 4.02
2441 2639 0.679505 CGGTCACCCTGAGTTCTGAA 59.320 55.000 0.00 0.00 0.00 3.02
2467 2665 7.931948 ACCCTGTCAGCAATATTTACTACATAC 59.068 37.037 0.00 0.00 0.00 2.39
2468 2666 8.150945 CCCTGTCAGCAATATTTACTACATACT 58.849 37.037 0.00 0.00 0.00 2.12
2544 2742 7.653647 TGTTTGTGTGACTTTATATTTGGTCC 58.346 34.615 0.00 0.00 0.00 4.46
2682 2881 5.231702 ACCTCTTGGTATTGGTAAAACGA 57.768 39.130 0.00 0.00 46.43 3.85
2689 2888 5.071370 TGGTATTGGTAAAACGAACCACAT 58.929 37.500 0.00 0.00 46.56 3.21
2690 2889 5.535406 TGGTATTGGTAAAACGAACCACATT 59.465 36.000 0.00 0.00 46.56 2.71
2748 2947 1.095807 GCAGCCTAAACCATCGGTCC 61.096 60.000 0.00 0.00 33.12 4.46
2836 3036 5.105756 CCCTCACTTTCACTCTTTGTGTTTT 60.106 40.000 0.00 0.00 46.27 2.43
2905 3105 8.349983 ACGGACATTATATTTAAATTCCAGTGC 58.650 33.333 5.91 4.42 0.00 4.40
2995 3195 0.511221 ATTCCACGAACAAAGACGCG 59.489 50.000 3.53 3.53 0.00 6.01
3020 3220 1.589803 AACACGGTTTCTGGCTGTAC 58.410 50.000 0.00 0.00 0.00 2.90
3024 3224 1.336240 ACGGTTTCTGGCTGTACGTAC 60.336 52.381 18.90 18.90 0.00 3.67
3039 3239 2.460918 ACGTACGTGAATGCTAGATGC 58.539 47.619 22.14 0.00 43.25 3.91
3062 3262 3.119708 GCTCTTGTTCAACATCCATGTCC 60.120 47.826 0.00 0.00 40.80 4.02
3088 3288 3.586430 TGTGTCACGTGACTCATGG 57.414 52.632 39.62 4.54 44.99 3.66
3137 3337 4.561500 TTAGCTGTGCCTATAACACCAA 57.438 40.909 0.00 0.00 37.22 3.67
3264 3464 3.582208 AGTCAGAGAAACCAGCAGAAGAT 59.418 43.478 0.00 0.00 0.00 2.40
3356 3556 4.957327 GTCACCTACTGTTTCTCTAGGGAT 59.043 45.833 0.00 0.00 32.60 3.85
3693 3893 2.851195 TCTGAACAAGCTTTGACCTCC 58.149 47.619 0.00 0.00 0.00 4.30
3724 3924 4.413520 CAGAGGAAGATGGGAAAAGGGATA 59.586 45.833 0.00 0.00 0.00 2.59
3834 4040 0.108233 CTTCTGCTCCTGCTCCTGAC 60.108 60.000 0.00 0.00 40.48 3.51
3868 4074 5.877564 GCTAGTAAAGAAACCTGCAGAGAAT 59.122 40.000 17.39 0.00 0.00 2.40
3876 4082 6.587273 AGAAACCTGCAGAGAATATTCTACC 58.413 40.000 17.94 6.98 37.73 3.18
3907 4113 2.756840 TGACACTCAGGCTTCTGATG 57.243 50.000 0.00 1.72 45.45 3.07
3961 4167 1.792949 GTGACTCGGCAACTGTAACTG 59.207 52.381 0.00 0.00 0.00 3.16
4139 4345 0.670162 GCTGTGCTTGCCTCTTCAAA 59.330 50.000 0.00 0.00 0.00 2.69
4180 4386 5.396101 CCAATCTATCAAGGAGAAGAGCACA 60.396 44.000 0.00 0.00 0.00 4.57
4201 4407 2.363306 ACTTGGCAGTGGAAACATGA 57.637 45.000 0.00 0.00 46.14 3.07
4266 4472 1.134580 GCTGAGCAGGCTGACAAGATA 60.135 52.381 20.86 0.00 0.00 1.98
4268 4474 1.483827 TGAGCAGGCTGACAAGATAGG 59.516 52.381 20.86 0.00 0.00 2.57
4288 4494 3.330701 AGGGGAAAGTAGTCAATGCTTGA 59.669 43.478 0.00 0.00 33.67 3.02
4473 4679 7.670364 TGTCTATGGGTACATATCTGTTCATG 58.330 38.462 0.00 0.00 38.80 3.07
5035 5244 2.391678 GGTTCTATTACCTCCGTCCCA 58.608 52.381 0.00 0.00 35.23 4.37
5049 5258 3.325425 TCCGTCCCAAATTAGTTGACTCA 59.675 43.478 0.00 0.00 39.87 3.41
5063 5272 6.656632 AGTTGACTCAGATTTGTCTAGACA 57.343 37.500 21.74 21.74 39.98 3.41
5072 5281 7.654568 TCAGATTTGTCTAGACACGTTTTAGA 58.345 34.615 25.13 13.72 41.67 2.10
5085 5294 8.189460 AGACACGTTTTAGAGTTAGATACATCC 58.811 37.037 0.00 0.00 0.00 3.51
5089 5298 8.844244 ACGTTTTAGAGTTAGATACATCCGTAT 58.156 33.333 0.00 0.00 41.16 3.06
5104 5313 7.539712 ACATCCGTATCAGTCAACTAATTTG 57.460 36.000 0.00 0.00 36.42 2.32
5105 5314 6.538742 ACATCCGTATCAGTCAACTAATTTGG 59.461 38.462 0.00 0.00 35.69 3.28
5106 5315 6.288941 TCCGTATCAGTCAACTAATTTGGA 57.711 37.500 0.00 0.00 35.69 3.53
5107 5316 6.703319 TCCGTATCAGTCAACTAATTTGGAA 58.297 36.000 0.00 0.00 35.69 3.53
5108 5317 6.592607 TCCGTATCAGTCAACTAATTTGGAAC 59.407 38.462 0.00 0.00 35.69 3.62
5109 5318 6.455113 CCGTATCAGTCAACTAATTTGGAACG 60.455 42.308 0.00 0.00 35.69 3.95
5110 5319 5.880054 ATCAGTCAACTAATTTGGAACGG 57.120 39.130 0.00 0.00 35.69 4.44
5185 5394 6.647334 TTGCTCAATTTGACAATTCCACTA 57.353 33.333 0.00 0.00 29.41 2.74
5250 5463 5.606348 TTTTTGCCAAGTTCTATGTTGGT 57.394 34.783 3.21 0.00 44.48 3.67
5384 5702 5.086104 TGTAGTATTTTCCCACTCTGCTC 57.914 43.478 0.00 0.00 0.00 4.26
5470 5788 5.406649 CAATCCAGTCTGTTCTACTGAGTC 58.593 45.833 4.84 0.00 45.89 3.36
5538 5856 5.480073 TGGTTGGGGATCTTGAATTTTGTAG 59.520 40.000 0.00 0.00 0.00 2.74
5549 6162 9.918630 ATCTTGAATTTTGTAGTGATCCTTTTG 57.081 29.630 0.00 0.00 0.00 2.44
5552 6165 9.528018 TTGAATTTTGTAGTGATCCTTTTGTTC 57.472 29.630 0.00 0.00 0.00 3.18
5560 6173 8.188799 TGTAGTGATCCTTTTGTTCTCTATACG 58.811 37.037 0.00 0.00 0.00 3.06
5567 6180 5.805994 CCTTTTGTTCTCTATACGTCTGGTC 59.194 44.000 0.00 0.00 0.00 4.02
5623 6236 7.790027 AGATGCATTATCAGTAGGGTATGATC 58.210 38.462 0.00 0.00 38.31 2.92
5628 6241 7.416777 GCATTATCAGTAGGGTATGATCGATCA 60.417 40.741 29.09 29.09 41.70 2.92
5634 6247 5.650266 AGTAGGGTATGATCGATCACTGATC 59.350 44.000 29.49 17.41 40.03 2.92
5664 6278 2.076863 GTTGTAGGCTTGTAGCACCTG 58.923 52.381 0.00 0.00 44.75 4.00
5846 6460 8.891671 AAATGTGCAATGATAAAGAAAACTGT 57.108 26.923 0.00 0.00 0.00 3.55
5947 6562 5.636837 TGAGCGCATGGTTTTCTTTTATAC 58.363 37.500 11.47 0.00 0.00 1.47
5998 6613 3.128589 GCACTTCAACAACAGGAGTTTGA 59.871 43.478 0.00 0.00 35.28 2.69
6018 6645 2.046507 GACAGCAGCCTCCACCAG 60.047 66.667 0.00 0.00 0.00 4.00
6035 6662 0.887836 CAGAACAGCAGCAGCCTCAA 60.888 55.000 0.00 0.00 43.56 3.02
6093 6720 4.018490 CCAGACACCCAATCAATCATCAA 58.982 43.478 0.00 0.00 0.00 2.57
6156 6790 2.561858 TGGCTTGATGCATGTTGCTAAA 59.438 40.909 2.46 0.00 45.31 1.85
6179 6813 8.988064 AAATATAGCGAACGTCTAATCATCAT 57.012 30.769 0.00 0.00 0.00 2.45
6198 6832 5.023533 TCATGGCCAGTAAACATCTACTC 57.976 43.478 13.05 0.00 29.36 2.59
6234 6922 9.654417 ATTATTACAAACACACTAAAACACGTC 57.346 29.630 0.00 0.00 0.00 4.34
6245 6933 9.731819 CACACTAAAACACGTCTATATACATCT 57.268 33.333 0.00 0.00 0.00 2.90
6295 6983 4.732672 AATAGTGAACGGAGGGAGTAAC 57.267 45.455 0.00 0.00 0.00 2.50
6510 7200 2.863809 ACCCTGAAGTCACATTGGTTC 58.136 47.619 0.00 0.00 0.00 3.62
6511 7201 2.443255 ACCCTGAAGTCACATTGGTTCT 59.557 45.455 0.00 0.00 0.00 3.01
6512 7202 2.816087 CCCTGAAGTCACATTGGTTCTG 59.184 50.000 0.00 0.00 0.00 3.02
6513 7203 2.227388 CCTGAAGTCACATTGGTTCTGC 59.773 50.000 0.00 0.00 0.00 4.26
6514 7204 3.144506 CTGAAGTCACATTGGTTCTGCT 58.855 45.455 0.00 0.00 0.00 4.24
6516 7206 3.316029 TGAAGTCACATTGGTTCTGCTTG 59.684 43.478 0.00 0.00 0.00 4.01
6517 7207 2.936202 AGTCACATTGGTTCTGCTTGT 58.064 42.857 0.00 0.00 0.00 3.16
6519 7209 2.618241 GTCACATTGGTTCTGCTTGTGA 59.382 45.455 0.24 0.24 43.07 3.58
6521 7211 3.890756 TCACATTGGTTCTGCTTGTGAAT 59.109 39.130 1.84 0.00 42.53 2.57
6522 7212 4.022935 TCACATTGGTTCTGCTTGTGAATC 60.023 41.667 1.84 0.00 42.53 2.52
6523 7213 3.256631 ACATTGGTTCTGCTTGTGAATCC 59.743 43.478 0.00 0.00 0.00 3.01
6524 7214 2.957402 TGGTTCTGCTTGTGAATCCT 57.043 45.000 0.00 0.00 0.00 3.24
6528 7218 3.569701 GGTTCTGCTTGTGAATCCTGAAA 59.430 43.478 0.00 0.00 0.00 2.69
6529 7219 4.037923 GGTTCTGCTTGTGAATCCTGAAAA 59.962 41.667 0.00 0.00 0.00 2.29
6530 7220 4.836125 TCTGCTTGTGAATCCTGAAAAC 57.164 40.909 0.00 0.00 0.00 2.43
6531 7221 4.464008 TCTGCTTGTGAATCCTGAAAACT 58.536 39.130 0.00 0.00 0.00 2.66
6533 7223 5.470098 TCTGCTTGTGAATCCTGAAAACTAC 59.530 40.000 0.00 0.00 0.00 2.73
6534 7224 5.376625 TGCTTGTGAATCCTGAAAACTACT 58.623 37.500 0.00 0.00 0.00 2.57
6535 7225 5.470098 TGCTTGTGAATCCTGAAAACTACTC 59.530 40.000 0.00 0.00 0.00 2.59
6536 7226 5.106515 GCTTGTGAATCCTGAAAACTACTCC 60.107 44.000 0.00 0.00 0.00 3.85
6537 7227 5.560722 TGTGAATCCTGAAAACTACTCCA 57.439 39.130 0.00 0.00 0.00 3.86
6538 7228 6.126863 TGTGAATCCTGAAAACTACTCCAT 57.873 37.500 0.00 0.00 0.00 3.41
6540 7230 6.173339 GTGAATCCTGAAAACTACTCCATCA 58.827 40.000 0.00 0.00 0.00 3.07
6541 7231 6.825721 GTGAATCCTGAAAACTACTCCATCAT 59.174 38.462 0.00 0.00 0.00 2.45
6542 7232 7.987458 GTGAATCCTGAAAACTACTCCATCATA 59.013 37.037 0.00 0.00 0.00 2.15
6543 7233 7.987458 TGAATCCTGAAAACTACTCCATCATAC 59.013 37.037 0.00 0.00 0.00 2.39
6545 7235 5.724370 TCCTGAAAACTACTCCATCATACCA 59.276 40.000 0.00 0.00 0.00 3.25
6547 7237 7.567250 TCCTGAAAACTACTCCATCATACCATA 59.433 37.037 0.00 0.00 0.00 2.74
6548 7238 7.657761 CCTGAAAACTACTCCATCATACCATAC 59.342 40.741 0.00 0.00 0.00 2.39
6549 7239 8.319057 TGAAAACTACTCCATCATACCATACT 57.681 34.615 0.00 0.00 0.00 2.12
6554 7244 9.435570 AACTACTCCATCATACCATACTAAAGT 57.564 33.333 0.00 0.00 0.00 2.66
6556 7246 9.698309 CTACTCCATCATACCATACTAAAGTTG 57.302 37.037 0.00 0.00 0.00 3.16
6557 7247 8.319057 ACTCCATCATACCATACTAAAGTTGA 57.681 34.615 0.00 0.00 0.00 3.18
6558 7248 8.424918 ACTCCATCATACCATACTAAAGTTGAG 58.575 37.037 0.00 0.00 0.00 3.02
6559 7249 8.547481 TCCATCATACCATACTAAAGTTGAGA 57.453 34.615 0.00 0.00 0.00 3.27
6560 7250 8.421784 TCCATCATACCATACTAAAGTTGAGAC 58.578 37.037 0.00 0.00 0.00 3.36
6561 7251 8.204160 CCATCATACCATACTAAAGTTGAGACA 58.796 37.037 0.00 0.00 0.00 3.41
6562 7252 9.035607 CATCATACCATACTAAAGTTGAGACAC 57.964 37.037 0.00 0.00 0.00 3.67
6572 7262 8.166422 ACTAAAGTTGAGACACTTATTTTGGG 57.834 34.615 0.00 0.00 35.87 4.12
6573 7263 7.996644 ACTAAAGTTGAGACACTTATTTTGGGA 59.003 33.333 0.00 0.00 35.87 4.37
6574 7264 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
6576 7266 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
6578 7268 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
6579 7269 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
6580 7270 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
6582 7272 2.645797 ACTTATTTTGGGACGGAGGGAA 59.354 45.455 0.00 0.00 0.00 3.97
6583 7273 3.268595 ACTTATTTTGGGACGGAGGGAAT 59.731 43.478 0.00 0.00 0.00 3.01
6585 7275 5.044698 ACTTATTTTGGGACGGAGGGAATAA 60.045 40.000 0.00 0.00 0.00 1.40
6619 7359 6.618287 TGAATCACTTTTGTACTCAAGTGG 57.382 37.500 25.23 14.17 46.72 4.00
6807 7547 9.719355 AAATTTATCATTCCTGGTGGTTTTTAC 57.281 29.630 0.00 0.00 34.23 2.01
6816 7559 6.137559 TCCTGGTGGTTTTTACCTACATTTT 58.862 36.000 0.00 0.00 39.01 1.82
6820 7563 6.183360 TGGTGGTTTTTACCTACATTTTCACC 60.183 38.462 0.00 0.00 39.01 4.02
6834 7577 5.827797 ACATTTTCACCGCTTATGGTATCAT 59.172 36.000 0.00 0.00 41.38 2.45
6878 7623 0.756903 GGCGGCCTATCTTTGTCCTA 59.243 55.000 12.87 0.00 0.00 2.94
6920 7665 6.806959 ATATCCTATATACTCCCTCCCTCC 57.193 45.833 0.00 0.00 0.00 4.30
6921 7666 2.851194 TCCTATATACTCCCTCCCTCCG 59.149 54.545 0.00 0.00 0.00 4.63
6922 7667 2.851194 CCTATATACTCCCTCCCTCCGA 59.149 54.545 0.00 0.00 0.00 4.55
6923 7668 3.268856 CCTATATACTCCCTCCCTCCGAA 59.731 52.174 0.00 0.00 0.00 4.30
6924 7669 3.917324 ATATACTCCCTCCCTCCGAAA 57.083 47.619 0.00 0.00 0.00 3.46
6925 7670 2.563039 ATACTCCCTCCCTCCGAAAA 57.437 50.000 0.00 0.00 0.00 2.29
6926 7671 2.330661 TACTCCCTCCCTCCGAAAAA 57.669 50.000 0.00 0.00 0.00 1.94
6927 7672 0.984995 ACTCCCTCCCTCCGAAAAAG 59.015 55.000 0.00 0.00 0.00 2.27
6928 7673 0.393132 CTCCCTCCCTCCGAAAAAGC 60.393 60.000 0.00 0.00 0.00 3.51
6929 7674 0.840722 TCCCTCCCTCCGAAAAAGCT 60.841 55.000 0.00 0.00 0.00 3.74
6930 7675 0.038310 CCCTCCCTCCGAAAAAGCTT 59.962 55.000 0.00 0.00 0.00 3.74
6931 7676 1.168714 CCTCCCTCCGAAAAAGCTTG 58.831 55.000 0.00 0.00 0.00 4.01
6932 7677 1.545651 CCTCCCTCCGAAAAAGCTTGT 60.546 52.381 0.00 0.00 0.00 3.16
6933 7678 1.807142 CTCCCTCCGAAAAAGCTTGTC 59.193 52.381 0.00 0.00 0.00 3.18
6934 7679 0.881796 CCCTCCGAAAAAGCTTGTCC 59.118 55.000 0.00 0.00 0.00 4.02
6935 7680 0.881796 CCTCCGAAAAAGCTTGTCCC 59.118 55.000 0.00 0.00 0.00 4.46
6936 7681 1.545651 CCTCCGAAAAAGCTTGTCCCT 60.546 52.381 0.00 0.00 0.00 4.20
6937 7682 1.807142 CTCCGAAAAAGCTTGTCCCTC 59.193 52.381 0.00 0.00 0.00 4.30
6938 7683 1.142060 TCCGAAAAAGCTTGTCCCTCA 59.858 47.619 0.00 0.00 0.00 3.86
6939 7684 1.953686 CCGAAAAAGCTTGTCCCTCAA 59.046 47.619 0.00 0.00 34.61 3.02
6940 7685 2.360801 CCGAAAAAGCTTGTCCCTCAAA 59.639 45.455 0.00 0.00 35.48 2.69
6941 7686 3.005791 CCGAAAAAGCTTGTCCCTCAAAT 59.994 43.478 0.00 0.00 35.48 2.32
6942 7687 3.983344 CGAAAAAGCTTGTCCCTCAAATG 59.017 43.478 0.00 0.00 35.48 2.32
6943 7688 4.261572 CGAAAAAGCTTGTCCCTCAAATGA 60.262 41.667 0.00 0.00 35.48 2.57
6944 7689 5.600696 GAAAAAGCTTGTCCCTCAAATGAA 58.399 37.500 0.00 0.00 35.48 2.57
6945 7690 5.813513 AAAAGCTTGTCCCTCAAATGAAT 57.186 34.783 0.00 0.00 35.48 2.57
6946 7691 4.796038 AAGCTTGTCCCTCAAATGAATG 57.204 40.909 0.00 0.00 35.48 2.67
6947 7692 3.771216 AGCTTGTCCCTCAAATGAATGT 58.229 40.909 0.00 0.00 35.48 2.71
6948 7693 4.922206 AGCTTGTCCCTCAAATGAATGTA 58.078 39.130 0.00 0.00 35.48 2.29
6949 7694 5.513233 AGCTTGTCCCTCAAATGAATGTAT 58.487 37.500 0.00 0.00 35.48 2.29
6950 7695 5.954150 AGCTTGTCCCTCAAATGAATGTATT 59.046 36.000 0.00 0.00 35.48 1.89
6951 7696 6.438425 AGCTTGTCCCTCAAATGAATGTATTT 59.562 34.615 0.00 0.00 35.48 1.40
6952 7697 7.615365 AGCTTGTCCCTCAAATGAATGTATTTA 59.385 33.333 0.00 0.00 35.48 1.40
6953 7698 7.917505 GCTTGTCCCTCAAATGAATGTATTTAG 59.082 37.037 0.00 0.00 35.48 1.85
6954 7699 7.333528 TGTCCCTCAAATGAATGTATTTAGC 57.666 36.000 0.00 0.00 0.00 3.09
6955 7700 6.889177 TGTCCCTCAAATGAATGTATTTAGCA 59.111 34.615 0.00 0.00 0.00 3.49
6956 7701 7.148086 TGTCCCTCAAATGAATGTATTTAGCAC 60.148 37.037 0.00 0.00 0.00 4.40
6957 7702 6.321181 TCCCTCAAATGAATGTATTTAGCACC 59.679 38.462 0.00 0.00 0.00 5.01
6958 7703 6.096705 CCCTCAAATGAATGTATTTAGCACCA 59.903 38.462 0.00 0.00 0.00 4.17
6959 7704 7.363705 CCCTCAAATGAATGTATTTAGCACCAA 60.364 37.037 0.00 0.00 0.00 3.67
6960 7705 7.703621 CCTCAAATGAATGTATTTAGCACCAAG 59.296 37.037 0.00 0.00 0.00 3.61
6961 7706 8.121305 TCAAATGAATGTATTTAGCACCAAGT 57.879 30.769 0.00 0.00 0.00 3.16
6962 7707 8.584157 TCAAATGAATGTATTTAGCACCAAGTT 58.416 29.630 0.00 0.00 0.00 2.66
6963 7708 9.853555 CAAATGAATGTATTTAGCACCAAGTTA 57.146 29.630 0.00 0.00 0.00 2.24
6965 7710 8.807948 ATGAATGTATTTAGCACCAAGTTAGT 57.192 30.769 0.00 0.00 0.00 2.24
6966 7711 9.899661 ATGAATGTATTTAGCACCAAGTTAGTA 57.100 29.630 0.00 0.00 0.00 1.82
6967 7712 9.158233 TGAATGTATTTAGCACCAAGTTAGTAC 57.842 33.333 0.00 0.00 0.00 2.73
6968 7713 9.379791 GAATGTATTTAGCACCAAGTTAGTACT 57.620 33.333 0.00 0.00 35.68 2.73
6971 7716 9.246670 TGTATTTAGCACCAAGTTAGTACTAGA 57.753 33.333 2.23 0.00 33.17 2.43
6975 7720 8.812513 TTAGCACCAAGTTAGTACTAGATACA 57.187 34.615 2.23 0.00 36.09 2.29
6976 7721 7.899648 AGCACCAAGTTAGTACTAGATACAT 57.100 36.000 2.23 0.00 36.09 2.29
6977 7722 8.307582 AGCACCAAGTTAGTACTAGATACATT 57.692 34.615 2.23 0.00 36.09 2.71
6978 7723 8.414778 AGCACCAAGTTAGTACTAGATACATTC 58.585 37.037 2.23 0.00 36.09 2.67
6979 7724 8.195436 GCACCAAGTTAGTACTAGATACATTCA 58.805 37.037 2.23 0.00 36.09 2.57
6988 7733 8.783660 AGTACTAGATACATTCATTTGAGGGA 57.216 34.615 0.00 0.00 36.09 4.20
6989 7734 8.643324 AGTACTAGATACATTCATTTGAGGGAC 58.357 37.037 0.00 0.00 36.09 4.46
6990 7735 7.437713 ACTAGATACATTCATTTGAGGGACA 57.562 36.000 0.00 0.00 0.00 4.02
6991 7736 7.861629 ACTAGATACATTCATTTGAGGGACAA 58.138 34.615 0.00 0.00 36.65 3.18
6992 7737 7.989741 ACTAGATACATTCATTTGAGGGACAAG 59.010 37.037 0.00 0.00 39.77 3.16
6993 7738 5.591877 AGATACATTCATTTGAGGGACAAGC 59.408 40.000 0.00 0.00 39.77 4.01
6994 7739 3.771216 ACATTCATTTGAGGGACAAGCT 58.229 40.909 0.00 0.00 39.77 3.74
6995 7740 4.154942 ACATTCATTTGAGGGACAAGCTT 58.845 39.130 0.00 0.00 39.77 3.74
6996 7741 4.021719 ACATTCATTTGAGGGACAAGCTTG 60.022 41.667 24.84 24.84 39.77 4.01
6997 7742 2.517959 TCATTTGAGGGACAAGCTTGG 58.482 47.619 29.18 12.28 39.77 3.61
6998 7743 1.547372 CATTTGAGGGACAAGCTTGGG 59.453 52.381 29.18 6.83 39.77 4.12
6999 7744 0.850100 TTTGAGGGACAAGCTTGGGA 59.150 50.000 29.18 4.51 39.77 4.37
7000 7745 0.110486 TTGAGGGACAAGCTTGGGAC 59.890 55.000 29.18 18.90 34.20 4.46
7001 7746 1.059584 TGAGGGACAAGCTTGGGACA 61.060 55.000 29.18 17.71 0.00 4.02
7002 7747 4.092026 TTGAGGGACAAGCTTGGGACAA 62.092 50.000 29.18 21.59 37.48 3.18
7003 7748 5.893518 TTGAGGGACAAGCTTGGGACAAG 62.894 52.174 29.18 3.71 37.48 3.16
7013 7758 3.811031 TGGGACAAGCTTTTTCGGA 57.189 47.368 0.00 0.00 31.92 4.55
7014 7759 1.314730 TGGGACAAGCTTTTTCGGAC 58.685 50.000 0.00 0.00 31.92 4.79
7015 7760 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.00 0.00 4.79
7016 7761 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
7017 7762 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
7018 7763 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
7019 7764 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
7020 7765 0.108019 AAGCTTTTTCGGACGGAGGT 59.892 50.000 0.00 0.00 0.00 3.85
7021 7766 0.971386 AGCTTTTTCGGACGGAGGTA 59.029 50.000 0.00 0.00 0.00 3.08
7022 7767 1.067071 AGCTTTTTCGGACGGAGGTAG 60.067 52.381 0.00 0.00 0.00 3.18
7023 7768 1.337541 GCTTTTTCGGACGGAGGTAGT 60.338 52.381 0.00 0.00 0.00 2.73
7024 7769 2.094545 GCTTTTTCGGACGGAGGTAGTA 60.095 50.000 0.00 0.00 0.00 1.82
7025 7770 3.429960 GCTTTTTCGGACGGAGGTAGTAT 60.430 47.826 0.00 0.00 0.00 2.12
7026 7771 4.202050 GCTTTTTCGGACGGAGGTAGTATA 60.202 45.833 0.00 0.00 0.00 1.47
7027 7772 5.508657 GCTTTTTCGGACGGAGGTAGTATAT 60.509 44.000 0.00 0.00 0.00 0.86
7028 7773 6.294176 GCTTTTTCGGACGGAGGTAGTATATA 60.294 42.308 0.00 0.00 0.00 0.86
7029 7774 7.576477 GCTTTTTCGGACGGAGGTAGTATATAT 60.576 40.741 0.00 0.00 0.00 0.86
7030 7775 7.765695 TTTTCGGACGGAGGTAGTATATATT 57.234 36.000 0.00 0.00 0.00 1.28
7033 7778 8.498054 TTCGGACGGAGGTAGTATATATTTAG 57.502 38.462 0.00 0.00 0.00 1.85
7079 7826 4.639755 TCATGCTTTCACTTGTCTGAAACA 59.360 37.500 0.00 0.00 35.63 2.83
7080 7827 4.355543 TGCTTTCACTTGTCTGAAACAC 57.644 40.909 0.00 0.00 37.70 3.32
7081 7828 4.009675 TGCTTTCACTTGTCTGAAACACT 58.990 39.130 0.00 0.00 37.70 3.55
7082 7829 4.458989 TGCTTTCACTTGTCTGAAACACTT 59.541 37.500 0.00 0.00 37.70 3.16
7083 7830 4.795278 GCTTTCACTTGTCTGAAACACTTG 59.205 41.667 0.00 0.00 37.70 3.16
7086 7833 3.689161 TCACTTGTCTGAAACACTTGTGG 59.311 43.478 5.72 0.00 37.70 4.17
7339 8102 6.265422 TCTTCATTTCTCCTTTGTTTTCCCTC 59.735 38.462 0.00 0.00 0.00 4.30
7354 8117 2.391678 TCCCTCGTGTAAATACCCTCC 58.608 52.381 0.00 0.00 0.00 4.30
7432 8195 6.940831 TGTGATTGATCAAACTCAACTCAA 57.059 33.333 13.09 0.00 37.93 3.02
7441 8204 5.547465 TCAAACTCAACTCAACGTCCATAT 58.453 37.500 0.00 0.00 0.00 1.78
7465 8228 1.544691 ACCGTGTTGCCTACTGAGTAG 59.455 52.381 12.62 12.62 36.04 2.57
7470 8233 2.747989 TGTTGCCTACTGAGTAGACTCG 59.252 50.000 20.66 5.32 45.72 4.18
7476 8239 3.866910 CCTACTGAGTAGACTCGACTCAC 59.133 52.174 20.66 0.00 46.49 3.51
7482 8245 0.738762 TAGACTCGACTCACCGTCCG 60.739 60.000 0.00 0.00 39.56 4.79
7484 8247 2.238071 GACTCGACTCACCGTCCGTC 62.238 65.000 0.00 0.00 39.56 4.79
7491 8254 0.878523 CTCACCGTCCGTCAAAAGCA 60.879 55.000 0.00 0.00 0.00 3.91
7495 8258 1.001633 ACCGTCCGTCAAAAGCAGTAT 59.998 47.619 0.00 0.00 0.00 2.12
7497 8260 2.093783 CCGTCCGTCAAAAGCAGTATTC 59.906 50.000 0.00 0.00 0.00 1.75
7498 8261 2.734606 CGTCCGTCAAAAGCAGTATTCA 59.265 45.455 0.00 0.00 0.00 2.57
7499 8262 3.181530 CGTCCGTCAAAAGCAGTATTCAG 60.182 47.826 0.00 0.00 0.00 3.02
7500 8263 3.746492 GTCCGTCAAAAGCAGTATTCAGT 59.254 43.478 0.00 0.00 0.00 3.41
7501 8264 4.927425 GTCCGTCAAAAGCAGTATTCAGTA 59.073 41.667 0.00 0.00 0.00 2.74
7502 8265 5.581085 GTCCGTCAAAAGCAGTATTCAGTAT 59.419 40.000 0.00 0.00 0.00 2.12
7504 8267 6.092122 TCCGTCAAAAGCAGTATTCAGTATTG 59.908 38.462 0.00 0.00 0.00 1.90
7505 8268 5.734498 CGTCAAAAGCAGTATTCAGTATTGC 59.266 40.000 0.00 0.00 44.00 3.56
7506 8269 6.030228 GTCAAAAGCAGTATTCAGTATTGCC 58.970 40.000 0.00 0.00 44.55 4.52
7508 8271 7.065803 GTCAAAAGCAGTATTCAGTATTGCCTA 59.934 37.037 0.00 0.00 44.55 3.93
7509 8272 6.927294 AAAGCAGTATTCAGTATTGCCTAC 57.073 37.500 0.00 0.00 44.55 3.18
7520 8283 1.097547 ATTGCCTACTGATGCCGTGC 61.098 55.000 0.00 0.00 0.00 5.34
7521 8284 2.125147 GCCTACTGATGCCGTGCA 60.125 61.111 1.01 1.01 44.86 4.57
7530 8293 1.950216 TGATGCCGTGCAACTTGTTTA 59.050 42.857 2.68 0.00 43.62 2.01
7574 8337 3.057736 AGTGTTACGATCGTGCAGTACTT 60.058 43.478 30.23 2.46 0.00 2.24
7575 8338 3.300066 GTGTTACGATCGTGCAGTACTTC 59.700 47.826 30.23 11.71 0.00 3.01
7599 8362 4.082949 AGTTATAAACGTGCAAGGGAAAGC 60.083 41.667 4.26 0.00 36.23 3.51
7603 8366 2.653115 GTGCAAGGGAAAGCCAGC 59.347 61.111 0.00 0.00 35.15 4.85
7626 8389 8.689972 CAGCATTATCTTCCCAAAAACTTCTAT 58.310 33.333 0.00 0.00 0.00 1.98
7728 8501 5.394738 TCTACACATATCCCCTCGAAGAAT 58.605 41.667 0.00 0.00 34.09 2.40
7823 8602 4.978083 TGATCTGTCTACTAAACGGACC 57.022 45.455 0.00 0.00 34.96 4.46
7858 8639 2.696775 TCACCCCTCTACACAAAGGAA 58.303 47.619 0.00 0.00 34.35 3.36
7882 8694 4.331968 GGTAACAACTCCATCAACCATCA 58.668 43.478 0.00 0.00 0.00 3.07
7883 8695 4.764823 GGTAACAACTCCATCAACCATCAA 59.235 41.667 0.00 0.00 0.00 2.57
7884 8696 5.242838 GGTAACAACTCCATCAACCATCAAA 59.757 40.000 0.00 0.00 0.00 2.69
7885 8697 4.853924 ACAACTCCATCAACCATCAAAC 57.146 40.909 0.00 0.00 0.00 2.93
7886 8698 4.473444 ACAACTCCATCAACCATCAAACT 58.527 39.130 0.00 0.00 0.00 2.66
7887 8699 4.279169 ACAACTCCATCAACCATCAAACTG 59.721 41.667 0.00 0.00 0.00 3.16
7888 8700 4.371624 ACTCCATCAACCATCAAACTGA 57.628 40.909 0.00 0.00 0.00 3.41
7889 8701 4.330250 ACTCCATCAACCATCAAACTGAG 58.670 43.478 0.00 0.00 0.00 3.35
7890 8702 3.689347 TCCATCAACCATCAAACTGAGG 58.311 45.455 0.00 0.00 0.00 3.86
7897 8709 3.433306 CCATCAAACTGAGGGGTTACA 57.567 47.619 0.00 0.00 44.05 2.41
7898 8710 3.761897 CCATCAAACTGAGGGGTTACAA 58.238 45.455 0.00 0.00 44.05 2.41
7899 8711 3.506067 CCATCAAACTGAGGGGTTACAAC 59.494 47.826 0.00 0.00 44.05 3.32
7900 8712 4.398319 CATCAAACTGAGGGGTTACAACT 58.602 43.478 0.00 0.00 0.00 3.16
7901 8713 4.081322 TCAAACTGAGGGGTTACAACTC 57.919 45.455 0.00 0.00 0.00 3.01
7912 8724 5.757850 GGGTTACAACTCCATCAATCATC 57.242 43.478 0.00 0.00 0.00 2.92
8025 8837 1.792367 CTGCTGATTTTGTCGTCGTCA 59.208 47.619 0.00 0.00 0.00 4.35
8043 8855 3.480345 CGTCATCAATGTCAAACGTCTCG 60.480 47.826 0.00 0.00 0.00 4.04
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.630878 AGGAGGCTTGATTCCGTTTCT 59.369 47.619 0.00 0.00 38.54 2.52
32 34 2.570181 GTGCATGTCAAGCCAGGC 59.430 61.111 1.84 1.84 42.20 4.85
42 44 2.030412 TCCGAGTTGCGTGCATGT 59.970 55.556 7.93 0.00 38.67 3.21
96 103 0.249398 GTTCCTTTCTGCGAGCCCTA 59.751 55.000 0.00 0.00 0.00 3.53
97 104 1.003233 GTTCCTTTCTGCGAGCCCT 60.003 57.895 0.00 0.00 0.00 5.19
197 204 6.980397 CACAAAAAGAAACTTAGCATGGAAGT 59.020 34.615 0.00 0.00 38.81 3.01
220 227 2.404177 GATCGAAGCTTAGCGCGCAC 62.404 60.000 35.10 19.19 45.59 5.34
223 230 1.555538 GTGATCGAAGCTTAGCGCG 59.444 57.895 14.31 14.31 45.59 6.86
393 487 5.352643 AAGACGGTTGCAAGTTGTATAAC 57.647 39.130 0.00 7.78 37.06 1.89
394 488 6.482641 TGTAAAGACGGTTGCAAGTTGTATAA 59.517 34.615 0.00 0.00 0.00 0.98
395 489 5.990386 TGTAAAGACGGTTGCAAGTTGTATA 59.010 36.000 0.00 0.00 0.00 1.47
396 490 4.817464 TGTAAAGACGGTTGCAAGTTGTAT 59.183 37.500 0.00 0.00 0.00 2.29
397 491 4.034279 GTGTAAAGACGGTTGCAAGTTGTA 59.966 41.667 0.00 0.00 0.00 2.41
398 492 3.011119 TGTAAAGACGGTTGCAAGTTGT 58.989 40.909 0.00 0.00 0.00 3.32
420 514 7.341769 TGGGAGTAGTATTGGATTTGGATTTTG 59.658 37.037 0.00 0.00 0.00 2.44
434 528 7.916077 ATAAAGTACTGCTGGGAGTAGTATT 57.084 36.000 9.41 8.76 43.48 1.89
436 530 8.827832 TTAATAAAGTACTGCTGGGAGTAGTA 57.172 34.615 9.41 0.00 39.42 1.82
437 531 7.729124 TTAATAAAGTACTGCTGGGAGTAGT 57.271 36.000 0.00 3.32 43.57 2.73
438 532 9.046296 CAATTAATAAAGTACTGCTGGGAGTAG 57.954 37.037 0.00 0.00 33.91 2.57
439 533 7.497909 GCAATTAATAAAGTACTGCTGGGAGTA 59.502 37.037 0.00 0.00 0.00 2.59
440 534 6.318900 GCAATTAATAAAGTACTGCTGGGAGT 59.681 38.462 0.00 0.00 0.00 3.85
442 536 6.184068 TGCAATTAATAAAGTACTGCTGGGA 58.816 36.000 0.00 0.00 0.00 4.37
444 538 8.755696 TTTTGCAATTAATAAAGTACTGCTGG 57.244 30.769 0.00 0.00 0.00 4.85
446 540 9.369904 CCATTTTGCAATTAATAAAGTACTGCT 57.630 29.630 0.00 0.00 0.00 4.24
502 621 0.895530 CCTTGTCCTCTTCCGTGCTA 59.104 55.000 0.00 0.00 0.00 3.49
508 627 5.279056 CGTAATAGGATCCTTGTCCTCTTCC 60.279 48.000 22.03 0.00 45.51 3.46
539 658 2.561467 TACTCGATCTGGTCCCCGCA 62.561 60.000 0.00 0.00 0.00 5.69
571 690 5.187772 TGGGGGATCATTATCGACTAATCAG 59.812 44.000 0.00 0.00 32.44 2.90
572 691 5.090845 TGGGGGATCATTATCGACTAATCA 58.909 41.667 0.00 0.00 32.44 2.57
649 768 2.508586 AAGAGAAGAACGGCCGAGGC 62.509 60.000 35.90 19.96 41.06 4.70
650 769 0.458716 GAAGAGAAGAACGGCCGAGG 60.459 60.000 35.90 2.46 0.00 4.63
652 771 1.590147 GGAAGAGAAGAACGGCCGA 59.410 57.895 35.90 0.00 0.00 5.54
653 772 1.448013 GGGAAGAGAAGAACGGCCG 60.448 63.158 26.86 26.86 0.00 6.13
654 773 0.673956 GTGGGAAGAGAAGAACGGCC 60.674 60.000 0.00 0.00 0.00 6.13
658 777 3.677424 CGATGAGGTGGGAAGAGAAGAAC 60.677 52.174 0.00 0.00 0.00 3.01
659 778 2.497675 CGATGAGGTGGGAAGAGAAGAA 59.502 50.000 0.00 0.00 0.00 2.52
660 779 2.103373 CGATGAGGTGGGAAGAGAAGA 58.897 52.381 0.00 0.00 0.00 2.87
662 781 0.537188 GCGATGAGGTGGGAAGAGAA 59.463 55.000 0.00 0.00 0.00 2.87
663 782 1.330655 GGCGATGAGGTGGGAAGAGA 61.331 60.000 0.00 0.00 0.00 3.10
681 801 2.034687 CTGTCTGGCTGGGTTGGG 59.965 66.667 0.00 0.00 0.00 4.12
1318 1454 1.749258 GGAATCCACCAACCCGAGC 60.749 63.158 0.00 0.00 0.00 5.03
1320 1456 2.666207 CGGAATCCACCAACCCGA 59.334 61.111 0.00 0.00 42.49 5.14
1322 1458 3.131478 CGCGGAATCCACCAACCC 61.131 66.667 0.00 0.00 0.00 4.11
1323 1459 3.810896 GCGCGGAATCCACCAACC 61.811 66.667 8.83 0.00 0.00 3.77
1324 1460 4.160635 CGCGCGGAATCCACCAAC 62.161 66.667 24.84 0.00 0.00 3.77
1558 1734 1.534175 CGCAAACGGCCACAAACTTAA 60.534 47.619 2.24 0.00 40.31 1.85
1728 1907 3.815401 CTCAATCTGGAAACCTCAAACGT 59.185 43.478 0.00 0.00 0.00 3.99
1733 1912 2.305927 GACCCTCAATCTGGAAACCTCA 59.694 50.000 0.00 0.00 0.00 3.86
1749 1928 2.944094 GCACCCATAAAACATCGACCCT 60.944 50.000 0.00 0.00 0.00 4.34
1771 1950 4.996758 TGCCATATATATGCACACACACTC 59.003 41.667 16.08 0.00 32.40 3.51
1772 1951 4.971939 TGCCATATATATGCACACACACT 58.028 39.130 16.08 0.00 32.40 3.55
1787 1978 8.978874 TTAGAACAACAATCTACATGCCATAT 57.021 30.769 0.00 0.00 0.00 1.78
1796 1987 6.743575 ATGCACCTTAGAACAACAATCTAC 57.256 37.500 0.00 0.00 0.00 2.59
1800 1991 7.895759 ACATAAATGCACCTTAGAACAACAAT 58.104 30.769 0.00 0.00 0.00 2.71
1801 1992 7.013750 TGACATAAATGCACCTTAGAACAACAA 59.986 33.333 0.00 0.00 0.00 2.83
1811 2002 4.545610 CAACGTTGACATAAATGCACCTT 58.454 39.130 23.90 0.00 0.00 3.50
2053 2244 4.437239 CAAGTTAGGTGAGACAGGCTATG 58.563 47.826 0.00 0.00 0.00 2.23
2151 2342 3.527533 TCACGGGCATACAAATACTGAC 58.472 45.455 0.00 0.00 0.00 3.51
2337 2535 1.129998 CATTGCACACTCTACAGCAGC 59.870 52.381 0.00 0.00 38.35 5.25
2427 2625 1.059913 CAGGGTTCAGAACTCAGGGT 58.940 55.000 15.86 0.00 33.06 4.34
2441 2639 6.308015 TGTAGTAAATATTGCTGACAGGGT 57.692 37.500 4.26 0.00 0.00 4.34
2539 2737 0.764890 CAAACAGACTCCAGGGACCA 59.235 55.000 0.00 0.00 0.00 4.02
2544 2742 0.595095 GCAAGCAAACAGACTCCAGG 59.405 55.000 0.00 0.00 0.00 4.45
2695 2894 4.202243 ACAGTTGGTAGCAACCTAACGTAA 60.202 41.667 29.11 0.00 46.91 3.18
2748 2947 9.716531 TTCATCTCAACAGATAGCCATAATTAG 57.283 33.333 0.00 0.00 37.25 1.73
2836 3036 1.904287 AGCAACCCAAGCGACAATTA 58.096 45.000 0.00 0.00 37.01 1.40
2966 3166 2.029200 TGTTCGTGGAATTGCATTGCAT 60.029 40.909 12.95 0.00 42.56 3.96
2995 3195 1.529865 GCCAGAAACCGTGTTAGTCAC 59.470 52.381 0.00 0.00 43.03 3.67
3014 3214 1.625616 AGCATTCACGTACGTACAGC 58.374 50.000 22.34 20.81 0.00 4.40
3020 3220 1.448308 CGCATCTAGCATTCACGTACG 59.552 52.381 15.01 15.01 46.13 3.67
3024 3224 0.506080 GAGCGCATCTAGCATTCACG 59.494 55.000 11.47 0.00 46.13 4.35
3039 3239 2.485426 ACATGGATGTTGAACAAGAGCG 59.515 45.455 0.62 0.00 37.90 5.03
3062 3262 2.822827 GTCACGTGACACATTTAAGCG 58.177 47.619 37.16 0.00 44.18 4.68
3088 3288 7.721286 AGTGATGCTGTATCTATTTTGTAGC 57.279 36.000 7.26 0.00 36.71 3.58
3137 3337 8.098912 TGATATGAAGCAGTATTAGCATGTCAT 58.901 33.333 0.00 0.00 35.68 3.06
3264 3464 5.559770 TCTTCCTCTGCAACATGTTTATCA 58.440 37.500 8.77 6.56 0.00 2.15
3356 3556 9.591792 CTGAGAGTGTACTTTCATCAAATGATA 57.408 33.333 5.81 0.00 39.39 2.15
3693 3893 4.655963 TCCCATCTTCCTCTGTTTCTTTG 58.344 43.478 0.00 0.00 0.00 2.77
3724 3924 7.730784 AGGTATATCAAGGTGCTCTACTAACAT 59.269 37.037 0.00 0.00 0.00 2.71
3834 4040 3.784701 TCTTTACTAGCTTCAGCGAGG 57.215 47.619 12.82 1.46 46.07 4.63
3868 4074 7.557358 AGTGTCATGAATTTGCATGGTAGAATA 59.443 33.333 0.00 0.00 44.44 1.75
3876 4082 4.421058 CCTGAGTGTCATGAATTTGCATG 58.579 43.478 0.00 0.00 45.41 4.06
3907 4113 1.676967 CAGAAACCTGAGGGGCAGC 60.677 63.158 2.38 0.00 43.50 5.25
3961 4167 2.103263 CACCCATAGGAGTAGCTTGACC 59.897 54.545 0.00 0.00 36.73 4.02
4139 4345 1.299976 GGCTCGTTCCCCTGAATGT 59.700 57.895 0.00 0.00 38.42 2.71
4180 4386 3.758554 GTCATGTTTCCACTGCCAAGTAT 59.241 43.478 0.00 0.00 33.79 2.12
4201 4407 3.152341 CTGGCTCCTCAGTTTGAAATGT 58.848 45.455 0.00 0.00 0.00 2.71
4288 4494 4.021229 TGATGATCTGCAGCTCCATTTTT 58.979 39.130 14.69 0.00 33.04 1.94
4473 4679 2.427095 AGAAATCCATGCGCTTAAACCC 59.573 45.455 9.73 0.00 0.00 4.11
4686 4895 4.870123 ATACTGCACAAAAAGCATGGAA 57.130 36.364 0.00 0.00 41.82 3.53
5004 5213 7.514721 GGAGGTAATAGAACCCAATGACAATA 58.485 38.462 0.00 0.00 40.71 1.90
5049 5258 7.659186 ACTCTAAAACGTGTCTAGACAAATCT 58.341 34.615 26.74 12.84 43.77 2.40
5063 5272 7.093322 ACGGATGTATCTAACTCTAAAACGT 57.907 36.000 0.00 0.00 0.00 3.99
5085 5294 6.455113 CCGTTCCAAATTAGTTGACTGATACG 60.455 42.308 0.00 0.00 39.87 3.06
5089 5298 4.963373 TCCGTTCCAAATTAGTTGACTGA 58.037 39.130 0.00 0.00 39.87 3.41
5090 5299 4.154195 CCTCCGTTCCAAATTAGTTGACTG 59.846 45.833 0.00 0.00 39.87 3.51
5092 5301 3.439129 CCCTCCGTTCCAAATTAGTTGAC 59.561 47.826 0.00 0.00 39.87 3.18
5094 5303 3.681593 TCCCTCCGTTCCAAATTAGTTG 58.318 45.455 0.00 0.00 36.94 3.16
5095 5304 3.329814 ACTCCCTCCGTTCCAAATTAGTT 59.670 43.478 0.00 0.00 0.00 2.24
5097 5306 3.629142 ACTCCCTCCGTTCCAAATTAG 57.371 47.619 0.00 0.00 0.00 1.73
5099 5308 5.427481 TCTTATACTCCCTCCGTTCCAAATT 59.573 40.000 0.00 0.00 0.00 1.82
5100 5309 4.966805 TCTTATACTCCCTCCGTTCCAAAT 59.033 41.667 0.00 0.00 0.00 2.32
5102 5311 3.985127 TCTTATACTCCCTCCGTTCCAA 58.015 45.455 0.00 0.00 0.00 3.53
5103 5312 3.675348 TCTTATACTCCCTCCGTTCCA 57.325 47.619 0.00 0.00 0.00 3.53
5104 5313 6.854091 ATAATCTTATACTCCCTCCGTTCC 57.146 41.667 0.00 0.00 0.00 3.62
5142 5351 7.177568 TGAGCAATATAGTCCTGAGGATAGAAC 59.822 40.741 3.65 0.00 32.73 3.01
5185 5394 1.411977 CTCTCCAGATGAGTTCGGCAT 59.588 52.381 0.00 0.00 42.12 4.40
5250 5463 9.113838 GTAATTTGGATAAGATCTGCTTTCTGA 57.886 33.333 0.00 0.00 38.05 3.27
5470 5788 5.440610 ACTAGAATGGGAAATAGCCACAAG 58.559 41.667 0.00 0.00 0.00 3.16
5538 5856 7.221067 CAGACGTATAGAGAACAAAAGGATCAC 59.779 40.741 0.00 0.00 0.00 3.06
5549 6162 5.564048 AAGTGACCAGACGTATAGAGAAC 57.436 43.478 0.00 0.00 0.00 3.01
5552 6165 9.448294 GTATTTTAAGTGACCAGACGTATAGAG 57.552 37.037 0.00 0.00 0.00 2.43
5560 6173 4.092968 CGGCAGTATTTTAAGTGACCAGAC 59.907 45.833 0.00 0.00 0.00 3.51
5567 6180 3.840890 TTGCCGGCAGTATTTTAAGTG 57.159 42.857 30.75 0.00 0.00 3.16
5614 6227 3.511540 TGGATCAGTGATCGATCATACCC 59.488 47.826 29.53 23.33 40.93 3.69
5664 6278 4.347360 AACAGGTTAACCTAGACCACAC 57.653 45.455 26.66 0.00 46.65 3.82
5682 6296 6.892658 AATGTCATGCTAACCTGTTAAACA 57.107 33.333 0.00 0.00 0.00 2.83
5729 6343 9.851686 ATGCTATCTTGTTGAACAGGATAATTA 57.148 29.630 24.19 16.10 43.53 1.40
5785 6399 6.826741 GCTAACCTGTTAAATGGGATAACTCA 59.173 38.462 0.00 0.00 34.94 3.41
5926 6540 5.393027 CCAGTATAAAAGAAAACCATGCGCT 60.393 40.000 9.73 0.00 0.00 5.92
5947 6562 1.863267 CTCTAAATCCGAGCTGCCAG 58.137 55.000 0.00 0.00 0.00 4.85
5998 6613 4.385405 GTGGAGGCTGCTGTCGCT 62.385 66.667 7.74 0.00 36.97 4.93
6018 6645 1.168407 TGTTGAGGCTGCTGCTGTTC 61.168 55.000 15.64 11.01 39.59 3.18
6035 6662 1.271934 TGCTGCTGTTGTTGTTGTTGT 59.728 42.857 0.00 0.00 0.00 3.32
6093 6720 3.570212 AACAAGTCCTGGCCGGCT 61.570 61.111 28.56 0.85 0.00 5.52
6156 6790 6.975197 CCATGATGATTAGACGTTCGCTATAT 59.025 38.462 0.00 0.00 0.00 0.86
6169 6803 6.713903 AGATGTTTACTGGCCATGATGATTAG 59.286 38.462 5.51 0.00 0.00 1.73
6179 6813 2.504175 GGGAGTAGATGTTTACTGGCCA 59.496 50.000 4.71 4.71 34.13 5.36
6198 6832 7.174946 AGTGTGTTTGTAATAATGAACAGAGGG 59.825 37.037 0.00 0.00 33.15 4.30
6245 6933 8.463930 AGATGTTGTAACCTTTTTCTGAATCA 57.536 30.769 0.00 0.00 0.00 2.57
6343 7031 3.228188 TGGGAATAATGGGATGACAGC 57.772 47.619 0.00 0.00 0.00 4.40
6358 7046 7.397761 CCCACATTTAACCTTTAACTATGGGAA 59.602 37.037 6.54 0.00 43.90 3.97
6426 7114 2.514803 AGGTCAAAACTGGCATGTACC 58.485 47.619 0.00 0.00 0.00 3.34
6510 7200 4.843220 AGTTTTCAGGATTCACAAGCAG 57.157 40.909 0.00 0.00 0.00 4.24
6511 7201 5.376625 AGTAGTTTTCAGGATTCACAAGCA 58.623 37.500 0.00 0.00 0.00 3.91
6512 7202 5.106515 GGAGTAGTTTTCAGGATTCACAAGC 60.107 44.000 0.00 0.00 0.00 4.01
6513 7203 5.997746 TGGAGTAGTTTTCAGGATTCACAAG 59.002 40.000 0.00 0.00 0.00 3.16
6514 7204 5.935945 TGGAGTAGTTTTCAGGATTCACAA 58.064 37.500 0.00 0.00 0.00 3.33
6516 7206 6.173339 TGATGGAGTAGTTTTCAGGATTCAC 58.827 40.000 0.00 0.00 0.00 3.18
6517 7207 6.373005 TGATGGAGTAGTTTTCAGGATTCA 57.627 37.500 0.00 0.00 0.00 2.57
6519 7209 7.092444 TGGTATGATGGAGTAGTTTTCAGGATT 60.092 37.037 0.00 0.00 0.00 3.01
6521 7211 5.724370 TGGTATGATGGAGTAGTTTTCAGGA 59.276 40.000 0.00 0.00 0.00 3.86
6522 7212 5.989477 TGGTATGATGGAGTAGTTTTCAGG 58.011 41.667 0.00 0.00 0.00 3.86
6523 7213 8.424918 AGTATGGTATGATGGAGTAGTTTTCAG 58.575 37.037 0.00 0.00 0.00 3.02
6524 7214 8.319057 AGTATGGTATGATGGAGTAGTTTTCA 57.681 34.615 0.00 0.00 0.00 2.69
6528 7218 9.435570 ACTTTAGTATGGTATGATGGAGTAGTT 57.564 33.333 0.00 0.00 0.00 2.24
6529 7219 9.435570 AACTTTAGTATGGTATGATGGAGTAGT 57.564 33.333 0.00 0.00 0.00 2.73
6530 7220 9.698309 CAACTTTAGTATGGTATGATGGAGTAG 57.302 37.037 0.00 0.00 0.00 2.57
6531 7221 9.429109 TCAACTTTAGTATGGTATGATGGAGTA 57.571 33.333 0.00 0.00 0.00 2.59
6533 7223 8.642432 TCTCAACTTTAGTATGGTATGATGGAG 58.358 37.037 0.00 0.00 0.00 3.86
6534 7224 8.421784 GTCTCAACTTTAGTATGGTATGATGGA 58.578 37.037 0.00 0.00 0.00 3.41
6535 7225 8.204160 TGTCTCAACTTTAGTATGGTATGATGG 58.796 37.037 0.00 0.00 0.00 3.51
6536 7226 9.035607 GTGTCTCAACTTTAGTATGGTATGATG 57.964 37.037 0.00 0.00 0.00 3.07
6537 7227 8.982723 AGTGTCTCAACTTTAGTATGGTATGAT 58.017 33.333 0.00 0.00 0.00 2.45
6538 7228 8.362464 AGTGTCTCAACTTTAGTATGGTATGA 57.638 34.615 0.00 0.00 0.00 2.15
6547 7237 7.996644 TCCCAAAATAAGTGTCTCAACTTTAGT 59.003 33.333 0.00 0.00 40.77 2.24
6548 7238 8.290325 GTCCCAAAATAAGTGTCTCAACTTTAG 58.710 37.037 0.00 0.00 40.77 1.85
6549 7239 7.041644 CGTCCCAAAATAAGTGTCTCAACTTTA 60.042 37.037 0.00 0.00 40.77 1.85
6551 7241 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
6552 7242 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
6553 7243 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
6554 7244 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
6556 7246 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
6557 7247 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
6558 7248 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
6559 7249 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
6560 7250 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
6561 7251 2.271777 TCCCTCCGTCCCAAAATAAGT 58.728 47.619 0.00 0.00 0.00 2.24
6562 7252 3.359695 TTCCCTCCGTCCCAAAATAAG 57.640 47.619 0.00 0.00 0.00 1.73
6565 7255 3.268595 AGTTATTCCCTCCGTCCCAAAAT 59.731 43.478 0.00 0.00 0.00 1.82
6566 7256 2.645797 AGTTATTCCCTCCGTCCCAAAA 59.354 45.455 0.00 0.00 0.00 2.44
6567 7257 2.271777 AGTTATTCCCTCCGTCCCAAA 58.728 47.619 0.00 0.00 0.00 3.28
6568 7258 1.961133 AGTTATTCCCTCCGTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
6569 7259 2.023695 AGTAGTTATTCCCTCCGTCCCA 60.024 50.000 0.00 0.00 0.00 4.37
6570 7260 2.675583 AGTAGTTATTCCCTCCGTCCC 58.324 52.381 0.00 0.00 0.00 4.46
6571 7261 4.321824 GCATAGTAGTTATTCCCTCCGTCC 60.322 50.000 0.00 0.00 0.00 4.79
6572 7262 4.523558 AGCATAGTAGTTATTCCCTCCGTC 59.476 45.833 0.00 0.00 0.00 4.79
6573 7263 4.481072 AGCATAGTAGTTATTCCCTCCGT 58.519 43.478 0.00 0.00 0.00 4.69
6574 7264 5.010719 TCAAGCATAGTAGTTATTCCCTCCG 59.989 44.000 0.00 0.00 0.00 4.63
6576 7266 8.150945 TGATTCAAGCATAGTAGTTATTCCCTC 58.849 37.037 0.00 0.00 0.00 4.30
6578 7268 7.934120 AGTGATTCAAGCATAGTAGTTATTCCC 59.066 37.037 0.00 0.00 0.00 3.97
6579 7269 8.894768 AGTGATTCAAGCATAGTAGTTATTCC 57.105 34.615 0.00 0.00 0.00 3.01
6583 7273 9.502091 ACAAAAGTGATTCAAGCATAGTAGTTA 57.498 29.630 0.00 0.00 0.00 2.24
6585 7275 7.986085 ACAAAAGTGATTCAAGCATAGTAGT 57.014 32.000 0.00 0.00 0.00 2.73
6619 7359 9.691362 ATGGTTCACAAGTTGACATTAAAATAC 57.309 29.630 10.54 0.00 32.26 1.89
6705 7445 7.451566 GGATAATTACTGGTTCTGGGCAATATT 59.548 37.037 0.00 0.00 0.00 1.28
6713 7453 8.980481 ACTAAATGGATAATTACTGGTTCTGG 57.020 34.615 0.00 0.00 0.00 3.86
6775 7515 6.153340 CCACCAGGAATGATAAATTTCAGTGT 59.847 38.462 0.00 0.00 36.89 3.55
6807 7547 3.945285 ACCATAAGCGGTGAAAATGTAGG 59.055 43.478 0.00 0.00 38.07 3.18
6816 7559 4.681074 TCAATGATACCATAAGCGGTGA 57.319 40.909 0.00 0.00 40.39 4.02
6820 7563 6.544038 TGTGAATCAATGATACCATAAGCG 57.456 37.500 0.00 0.00 31.59 4.68
6834 7577 5.935206 TGGTTACTAAGCGATTGTGAATCAA 59.065 36.000 0.00 0.00 37.78 2.57
6878 7623 7.806180 AGGATATAAAATGTGTGAAGTAGGCT 58.194 34.615 0.00 0.00 0.00 4.58
6908 7653 0.984995 CTTTTTCGGAGGGAGGGAGT 59.015 55.000 0.00 0.00 0.00 3.85
6909 7654 0.393132 GCTTTTTCGGAGGGAGGGAG 60.393 60.000 0.00 0.00 0.00 4.30
6910 7655 0.840722 AGCTTTTTCGGAGGGAGGGA 60.841 55.000 0.00 0.00 0.00 4.20
6911 7656 0.038310 AAGCTTTTTCGGAGGGAGGG 59.962 55.000 0.00 0.00 0.00 4.30
6912 7657 1.168714 CAAGCTTTTTCGGAGGGAGG 58.831 55.000 0.00 0.00 0.00 4.30
6913 7658 1.807142 GACAAGCTTTTTCGGAGGGAG 59.193 52.381 0.00 0.00 0.00 4.30
6914 7659 1.544759 GGACAAGCTTTTTCGGAGGGA 60.545 52.381 0.00 0.00 0.00 4.20
6915 7660 0.881796 GGACAAGCTTTTTCGGAGGG 59.118 55.000 0.00 0.00 0.00 4.30
6916 7661 0.881796 GGGACAAGCTTTTTCGGAGG 59.118 55.000 0.00 0.00 0.00 4.30
6917 7662 1.807142 GAGGGACAAGCTTTTTCGGAG 59.193 52.381 0.00 0.00 0.00 4.63
6918 7663 1.142060 TGAGGGACAAGCTTTTTCGGA 59.858 47.619 0.00 0.00 0.00 4.55
6919 7664 1.604604 TGAGGGACAAGCTTTTTCGG 58.395 50.000 0.00 0.00 0.00 4.30
6920 7665 3.708563 TTTGAGGGACAAGCTTTTTCG 57.291 42.857 0.00 0.00 39.77 3.46
6921 7666 5.200368 TCATTTGAGGGACAAGCTTTTTC 57.800 39.130 0.00 0.00 39.77 2.29
6922 7667 5.612725 TTCATTTGAGGGACAAGCTTTTT 57.387 34.783 0.00 0.00 39.77 1.94
6923 7668 5.070847 ACATTCATTTGAGGGACAAGCTTTT 59.929 36.000 0.00 0.00 39.77 2.27
6924 7669 4.590222 ACATTCATTTGAGGGACAAGCTTT 59.410 37.500 0.00 0.00 39.77 3.51
6925 7670 4.154942 ACATTCATTTGAGGGACAAGCTT 58.845 39.130 0.00 0.00 39.77 3.74
6926 7671 3.771216 ACATTCATTTGAGGGACAAGCT 58.229 40.909 0.00 0.00 39.77 3.74
6927 7672 5.841957 ATACATTCATTTGAGGGACAAGC 57.158 39.130 0.00 0.00 39.77 4.01
6928 7673 7.917505 GCTAAATACATTCATTTGAGGGACAAG 59.082 37.037 0.00 0.00 39.77 3.16
6929 7674 7.395772 TGCTAAATACATTCATTTGAGGGACAA 59.604 33.333 0.00 0.00 36.65 3.18
6930 7675 6.889177 TGCTAAATACATTCATTTGAGGGACA 59.111 34.615 0.00 0.00 30.84 4.02
6931 7676 7.196331 GTGCTAAATACATTCATTTGAGGGAC 58.804 38.462 0.00 0.00 30.84 4.46
6932 7677 6.321181 GGTGCTAAATACATTCATTTGAGGGA 59.679 38.462 0.00 0.00 30.84 4.20
6933 7678 6.096705 TGGTGCTAAATACATTCATTTGAGGG 59.903 38.462 0.00 0.00 30.84 4.30
6934 7679 7.099266 TGGTGCTAAATACATTCATTTGAGG 57.901 36.000 0.00 0.00 30.84 3.86
6935 7680 8.246180 ACTTGGTGCTAAATACATTCATTTGAG 58.754 33.333 0.00 0.00 30.84 3.02
6936 7681 8.121305 ACTTGGTGCTAAATACATTCATTTGA 57.879 30.769 0.00 0.00 30.84 2.69
6937 7682 8.761575 AACTTGGTGCTAAATACATTCATTTG 57.238 30.769 0.00 0.00 30.84 2.32
6939 7684 9.243105 ACTAACTTGGTGCTAAATACATTCATT 57.757 29.630 0.00 0.00 0.00 2.57
6940 7685 8.807948 ACTAACTTGGTGCTAAATACATTCAT 57.192 30.769 0.00 0.00 0.00 2.57
6941 7686 9.158233 GTACTAACTTGGTGCTAAATACATTCA 57.842 33.333 0.00 0.00 0.00 2.57
6942 7687 9.379791 AGTACTAACTTGGTGCTAAATACATTC 57.620 33.333 0.00 0.00 29.00 2.67
6945 7690 9.246670 TCTAGTACTAACTTGGTGCTAAATACA 57.753 33.333 3.76 0.00 37.15 2.29
6949 7694 9.246670 TGTATCTAGTACTAACTTGGTGCTAAA 57.753 33.333 3.76 0.00 37.15 1.85
6950 7695 8.812513 TGTATCTAGTACTAACTTGGTGCTAA 57.187 34.615 3.76 0.00 37.15 3.09
6951 7696 8.991783 ATGTATCTAGTACTAACTTGGTGCTA 57.008 34.615 3.76 3.64 37.15 3.49
6952 7697 7.899648 ATGTATCTAGTACTAACTTGGTGCT 57.100 36.000 3.76 1.68 37.15 4.40
6953 7698 8.195436 TGAATGTATCTAGTACTAACTTGGTGC 58.805 37.037 3.76 0.00 37.15 5.01
6962 7707 9.877222 TCCCTCAAATGAATGTATCTAGTACTA 57.123 33.333 1.89 1.89 34.27 1.82
6963 7708 8.643324 GTCCCTCAAATGAATGTATCTAGTACT 58.357 37.037 0.00 0.00 34.27 2.73
6964 7709 8.421784 TGTCCCTCAAATGAATGTATCTAGTAC 58.578 37.037 0.00 0.00 0.00 2.73
6965 7710 8.547481 TGTCCCTCAAATGAATGTATCTAGTA 57.453 34.615 0.00 0.00 0.00 1.82
6966 7711 7.437713 TGTCCCTCAAATGAATGTATCTAGT 57.562 36.000 0.00 0.00 0.00 2.57
6967 7712 7.041508 GCTTGTCCCTCAAATGAATGTATCTAG 60.042 40.741 0.00 0.00 35.48 2.43
6968 7713 6.767902 GCTTGTCCCTCAAATGAATGTATCTA 59.232 38.462 0.00 0.00 35.48 1.98
6969 7714 5.591877 GCTTGTCCCTCAAATGAATGTATCT 59.408 40.000 0.00 0.00 35.48 1.98
6970 7715 5.591877 AGCTTGTCCCTCAAATGAATGTATC 59.408 40.000 0.00 0.00 35.48 2.24
6971 7716 5.513233 AGCTTGTCCCTCAAATGAATGTAT 58.487 37.500 0.00 0.00 35.48 2.29
6972 7717 4.922206 AGCTTGTCCCTCAAATGAATGTA 58.078 39.130 0.00 0.00 35.48 2.29
6973 7718 3.771216 AGCTTGTCCCTCAAATGAATGT 58.229 40.909 0.00 0.00 35.48 2.71
6974 7719 4.491676 CAAGCTTGTCCCTCAAATGAATG 58.508 43.478 18.65 0.00 35.48 2.67
6975 7720 3.512724 CCAAGCTTGTCCCTCAAATGAAT 59.487 43.478 24.35 0.00 35.48 2.57
6976 7721 2.892852 CCAAGCTTGTCCCTCAAATGAA 59.107 45.455 24.35 0.00 35.48 2.57
6977 7722 2.517959 CCAAGCTTGTCCCTCAAATGA 58.482 47.619 24.35 0.00 35.48 2.57
6978 7723 1.547372 CCCAAGCTTGTCCCTCAAATG 59.453 52.381 24.35 5.47 35.48 2.32
6979 7724 1.428912 TCCCAAGCTTGTCCCTCAAAT 59.571 47.619 24.35 0.00 35.48 2.32
6980 7725 0.850100 TCCCAAGCTTGTCCCTCAAA 59.150 50.000 24.35 0.00 35.48 2.69
6981 7726 0.110486 GTCCCAAGCTTGTCCCTCAA 59.890 55.000 24.35 0.00 34.61 3.02
6982 7727 1.059584 TGTCCCAAGCTTGTCCCTCA 61.060 55.000 24.35 12.85 0.00 3.86
6983 7728 0.110486 TTGTCCCAAGCTTGTCCCTC 59.890 55.000 24.35 10.65 0.00 4.30
6984 7729 0.111253 CTTGTCCCAAGCTTGTCCCT 59.889 55.000 24.35 0.00 0.00 4.20
6985 7730 1.527433 GCTTGTCCCAAGCTTGTCCC 61.527 60.000 24.35 11.81 40.01 4.46
6986 7731 1.959848 GCTTGTCCCAAGCTTGTCC 59.040 57.895 24.35 12.15 40.01 4.02
6992 7737 1.602920 CCGAAAAAGCTTGTCCCAAGC 60.603 52.381 18.69 18.69 43.31 4.01
6993 7738 1.953686 TCCGAAAAAGCTTGTCCCAAG 59.046 47.619 0.00 0.00 0.00 3.61
6994 7739 1.679153 GTCCGAAAAAGCTTGTCCCAA 59.321 47.619 0.00 0.00 0.00 4.12
6995 7740 1.314730 GTCCGAAAAAGCTTGTCCCA 58.685 50.000 0.00 0.00 0.00 4.37
6996 7741 0.237498 CGTCCGAAAAAGCTTGTCCC 59.763 55.000 0.00 0.00 0.00 4.46
6997 7742 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
6998 7743 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
6999 7744 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
7000 7745 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
7001 7746 0.108019 ACCTCCGTCCGAAAAAGCTT 59.892 50.000 0.00 0.00 0.00 3.74
7002 7747 0.971386 TACCTCCGTCCGAAAAAGCT 59.029 50.000 0.00 0.00 0.00 3.74
7003 7748 1.337541 ACTACCTCCGTCCGAAAAAGC 60.338 52.381 0.00 0.00 0.00 3.51
7004 7749 2.738013 ACTACCTCCGTCCGAAAAAG 57.262 50.000 0.00 0.00 0.00 2.27
7005 7750 7.765695 ATATATACTACCTCCGTCCGAAAAA 57.234 36.000 0.00 0.00 0.00 1.94
7006 7751 7.765695 AATATATACTACCTCCGTCCGAAAA 57.234 36.000 0.00 0.00 0.00 2.29
7007 7752 7.765695 AAATATATACTACCTCCGTCCGAAA 57.234 36.000 0.00 0.00 0.00 3.46
7008 7753 8.103305 ACTAAATATATACTACCTCCGTCCGAA 58.897 37.037 0.00 0.00 0.00 4.30
7009 7754 7.624549 ACTAAATATATACTACCTCCGTCCGA 58.375 38.462 0.00 0.00 0.00 4.55
7010 7755 7.856145 ACTAAATATATACTACCTCCGTCCG 57.144 40.000 0.00 0.00 0.00 4.79
7027 7772 8.556194 CGGCTGCATAAGAATTGTTACTAAATA 58.444 33.333 0.50 0.00 0.00 1.40
7028 7773 7.417612 CGGCTGCATAAGAATTGTTACTAAAT 58.582 34.615 0.50 0.00 0.00 1.40
7029 7774 6.183360 CCGGCTGCATAAGAATTGTTACTAAA 60.183 38.462 0.50 0.00 0.00 1.85
7030 7775 5.295787 CCGGCTGCATAAGAATTGTTACTAA 59.704 40.000 0.50 0.00 0.00 2.24
7033 7778 3.377172 ACCGGCTGCATAAGAATTGTTAC 59.623 43.478 0.00 0.00 0.00 2.50
7037 7782 2.423185 TGAACCGGCTGCATAAGAATTG 59.577 45.455 0.00 0.00 0.00 2.32
7079 7826 3.636300 TGCTGCAGAATTAAACCACAAGT 59.364 39.130 20.43 0.00 0.00 3.16
7080 7827 4.022935 TCTGCTGCAGAATTAAACCACAAG 60.023 41.667 28.72 0.00 37.57 3.16
7081 7828 3.888323 TCTGCTGCAGAATTAAACCACAA 59.112 39.130 28.72 2.25 37.57 3.33
7082 7829 3.485394 TCTGCTGCAGAATTAAACCACA 58.515 40.909 28.72 2.46 37.57 4.17
7083 7830 3.119708 CCTCTGCTGCAGAATTAAACCAC 60.120 47.826 30.00 0.00 40.18 4.16
7086 7833 3.753272 TGACCTCTGCTGCAGAATTAAAC 59.247 43.478 30.00 18.37 40.18 2.01
7272 8034 1.133513 TCAAGGAGGCTGGCTGAAAAA 60.134 47.619 9.06 0.00 0.00 1.94
7277 8039 2.045131 GCTTCAAGGAGGCTGGCTG 61.045 63.158 9.06 0.00 31.81 4.85
7354 8117 1.807742 TCACGTTTTATGGCTTTCCGG 59.192 47.619 0.00 0.00 34.14 5.14
7432 8195 3.125658 GCAACACGGTTTTATATGGACGT 59.874 43.478 0.00 0.00 34.61 4.34
7441 8204 3.181463 ACTCAGTAGGCAACACGGTTTTA 60.181 43.478 0.00 0.00 41.41 1.52
7476 8239 1.722011 ATACTGCTTTTGACGGACGG 58.278 50.000 0.00 0.00 0.00 4.79
7482 8245 6.030228 GGCAATACTGAATACTGCTTTTGAC 58.970 40.000 0.00 0.00 33.49 3.18
7484 8247 6.199937 AGGCAATACTGAATACTGCTTTTG 57.800 37.500 0.00 0.00 33.49 2.44
7498 8261 1.762957 ACGGCATCAGTAGGCAATACT 59.237 47.619 0.00 0.00 46.04 2.12
7499 8262 1.867233 CACGGCATCAGTAGGCAATAC 59.133 52.381 0.00 0.00 32.88 1.89
7500 8263 1.810031 GCACGGCATCAGTAGGCAATA 60.810 52.381 0.00 0.00 32.88 1.90
7501 8264 1.097547 GCACGGCATCAGTAGGCAAT 61.098 55.000 0.00 0.00 32.88 3.56
7502 8265 1.745115 GCACGGCATCAGTAGGCAA 60.745 57.895 0.00 0.00 32.88 4.52
7504 8267 1.745115 TTGCACGGCATCAGTAGGC 60.745 57.895 0.00 0.00 38.76 3.93
7505 8268 0.391661 AGTTGCACGGCATCAGTAGG 60.392 55.000 8.86 0.00 38.76 3.18
7506 8269 1.129251 CAAGTTGCACGGCATCAGTAG 59.871 52.381 8.86 0.00 38.76 2.57
7508 8271 0.819259 ACAAGTTGCACGGCATCAGT 60.819 50.000 1.81 5.17 38.76 3.41
7509 8272 0.311790 AACAAGTTGCACGGCATCAG 59.688 50.000 1.81 4.71 38.76 2.90
7515 8278 2.598907 CGTGAGTAAACAAGTTGCACGG 60.599 50.000 18.07 5.54 42.51 4.94
7520 8283 6.145534 TGAGATAAGCGTGAGTAAACAAGTTG 59.854 38.462 0.00 0.00 0.00 3.16
7521 8284 6.220930 TGAGATAAGCGTGAGTAAACAAGTT 58.779 36.000 0.00 0.00 0.00 2.66
7530 8293 7.148052 ACACTTATAACTGAGATAAGCGTGAGT 60.148 37.037 10.92 0.00 39.51 3.41
7559 8322 2.264109 ACTGAAGTACTGCACGATCG 57.736 50.000 14.88 14.88 0.00 3.69
7574 8337 4.274602 TCCCTTGCACGTTTATAACTGA 57.725 40.909 0.00 0.00 0.00 3.41
7575 8338 5.365403 TTTCCCTTGCACGTTTATAACTG 57.635 39.130 0.00 0.00 0.00 3.16
7599 8362 5.665916 AGTTTTTGGGAAGATAATGCTGG 57.334 39.130 0.00 0.00 0.00 4.85
7626 8389 6.714810 ACATAGAAAGCACCTGTAACATCAAA 59.285 34.615 0.00 0.00 0.00 2.69
7728 8501 3.743396 GCGTGGCAATTTTGTTCCATTTA 59.257 39.130 0.00 0.00 0.00 1.40
7747 8520 2.358039 TGGCTAACCAGTACAGCGT 58.642 52.632 0.00 0.00 42.67 5.07
7784 8557 6.069963 ACAGATCAAAGTCCAGCTATACCTTT 60.070 38.462 0.00 0.00 0.00 3.11
7785 8558 5.426833 ACAGATCAAAGTCCAGCTATACCTT 59.573 40.000 0.00 0.00 0.00 3.50
7786 8559 4.965532 ACAGATCAAAGTCCAGCTATACCT 59.034 41.667 0.00 0.00 0.00 3.08
7789 8562 7.063593 AGTAGACAGATCAAAGTCCAGCTATA 58.936 38.462 8.72 0.00 35.38 1.31
7790 8563 5.896678 AGTAGACAGATCAAAGTCCAGCTAT 59.103 40.000 8.72 0.00 35.38 2.97
7791 8564 5.265191 AGTAGACAGATCAAAGTCCAGCTA 58.735 41.667 8.72 0.00 35.38 3.32
7823 8602 2.741985 TGATTGCGCCACTCCACG 60.742 61.111 4.18 0.00 0.00 4.94
7858 8639 2.714250 TGGTTGATGGAGTTGTTACCCT 59.286 45.455 0.00 0.00 0.00 4.34
7882 8694 2.781174 TGGAGTTGTAACCCCTCAGTTT 59.219 45.455 0.00 0.00 0.00 2.66
7883 8695 2.414612 TGGAGTTGTAACCCCTCAGTT 58.585 47.619 0.00 0.00 0.00 3.16
7884 8696 2.112279 TGGAGTTGTAACCCCTCAGT 57.888 50.000 0.00 0.00 0.00 3.41
7885 8697 2.571653 TGATGGAGTTGTAACCCCTCAG 59.428 50.000 0.00 0.00 0.00 3.35
7886 8698 2.626785 TGATGGAGTTGTAACCCCTCA 58.373 47.619 0.00 2.70 0.00 3.86
7887 8699 3.713826 TTGATGGAGTTGTAACCCCTC 57.286 47.619 0.00 0.52 0.00 4.30
7888 8700 3.591527 TGATTGATGGAGTTGTAACCCCT 59.408 43.478 0.00 0.00 0.00 4.79
7889 8701 3.963129 TGATTGATGGAGTTGTAACCCC 58.037 45.455 0.00 0.00 0.00 4.95
7890 8702 5.192927 TGATGATTGATGGAGTTGTAACCC 58.807 41.667 0.00 0.00 0.00 4.11
7891 8703 6.757897 TTGATGATTGATGGAGTTGTAACC 57.242 37.500 0.00 0.00 0.00 2.85
7892 8704 7.820648 AGTTTGATGATTGATGGAGTTGTAAC 58.179 34.615 0.00 0.00 0.00 2.50
7893 8705 9.685276 ATAGTTTGATGATTGATGGAGTTGTAA 57.315 29.630 0.00 0.00 0.00 2.41
7894 8706 9.330063 GATAGTTTGATGATTGATGGAGTTGTA 57.670 33.333 0.00 0.00 0.00 2.41
7895 8707 8.051535 AGATAGTTTGATGATTGATGGAGTTGT 58.948 33.333 0.00 0.00 0.00 3.32
7896 8708 8.447924 AGATAGTTTGATGATTGATGGAGTTG 57.552 34.615 0.00 0.00 0.00 3.16
7897 8709 7.440556 CGAGATAGTTTGATGATTGATGGAGTT 59.559 37.037 0.00 0.00 0.00 3.01
7898 8710 6.927936 CGAGATAGTTTGATGATTGATGGAGT 59.072 38.462 0.00 0.00 0.00 3.85
7899 8711 7.150640 TCGAGATAGTTTGATGATTGATGGAG 58.849 38.462 0.00 0.00 0.00 3.86
7900 8712 7.054491 TCGAGATAGTTTGATGATTGATGGA 57.946 36.000 0.00 0.00 0.00 3.41
7901 8713 7.387122 ACATCGAGATAGTTTGATGATTGATGG 59.613 37.037 7.94 0.00 40.11 3.51
7902 8714 8.307921 ACATCGAGATAGTTTGATGATTGATG 57.692 34.615 7.94 0.00 40.11 3.07
7903 8715 9.987272 TTACATCGAGATAGTTTGATGATTGAT 57.013 29.630 7.94 0.00 40.11 2.57
7904 8716 9.816354 TTTACATCGAGATAGTTTGATGATTGA 57.184 29.630 7.94 0.00 40.11 2.57
7905 8717 9.855361 GTTTACATCGAGATAGTTTGATGATTG 57.145 33.333 7.94 0.00 40.11 2.67
7906 8718 9.046296 GGTTTACATCGAGATAGTTTGATGATT 57.954 33.333 7.94 0.00 40.11 2.57
7907 8719 8.424918 AGGTTTACATCGAGATAGTTTGATGAT 58.575 33.333 7.94 0.00 40.11 2.45
7908 8720 7.782049 AGGTTTACATCGAGATAGTTTGATGA 58.218 34.615 7.94 0.00 40.11 2.92
7909 8721 7.169982 GGAGGTTTACATCGAGATAGTTTGATG 59.830 40.741 0.00 0.00 42.33 3.07
7910 8722 7.210873 GGAGGTTTACATCGAGATAGTTTGAT 58.789 38.462 0.00 0.00 0.00 2.57
7911 8723 6.406624 GGGAGGTTTACATCGAGATAGTTTGA 60.407 42.308 0.00 0.00 0.00 2.69
7912 8724 5.753921 GGGAGGTTTACATCGAGATAGTTTG 59.246 44.000 0.00 0.00 0.00 2.93
8025 8837 4.055360 TGTTCGAGACGTTTGACATTGAT 58.945 39.130 0.00 0.00 0.00 2.57
8043 8855 2.105006 TCCAGATGCTGAAGCTGTTC 57.895 50.000 0.00 0.00 42.66 3.18
8128 8941 1.003233 AGACGATGGGGTGAGTTTTCC 59.997 52.381 0.00 0.00 0.00 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.