Multiple sequence alignment - TraesCS7D01G399700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G399700 chr7D 100.000 3487 0 0 1 3487 515820338 515823824 0.000000e+00 6440.0
1 TraesCS7D01G399700 chr7B 91.014 2593 169 37 940 3487 548162181 548164754 0.000000e+00 3439.0
2 TraesCS7D01G399700 chr7B 92.778 180 12 1 771 950 548161975 548162153 3.450000e-65 259.0
3 TraesCS7D01G399700 chr7A 87.544 2842 215 68 686 3487 589453504 589456246 0.000000e+00 3158.0
4 TraesCS7D01G399700 chr6A 82.443 262 20 13 488 728 530600666 530600922 4.560000e-49 206.0
5 TraesCS7D01G399700 chr4B 95.745 47 2 0 235 281 517431084 517431130 3.730000e-10 76.8
6 TraesCS7D01G399700 chr4B 100.000 32 0 0 306 337 454696957 454696926 3.760000e-05 60.2
7 TraesCS7D01G399700 chr5A 95.122 41 1 1 236 276 699477047 699477008 2.910000e-06 63.9
8 TraesCS7D01G399700 chr3B 100.000 32 0 0 306 337 499093770 499093739 3.760000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G399700 chr7D 515820338 515823824 3486 False 6440 6440 100.000 1 3487 1 chr7D.!!$F1 3486
1 TraesCS7D01G399700 chr7B 548161975 548164754 2779 False 1849 3439 91.896 771 3487 2 chr7B.!!$F1 2716
2 TraesCS7D01G399700 chr7A 589453504 589456246 2742 False 3158 3158 87.544 686 3487 1 chr7A.!!$F1 2801

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
646 647 0.17904 TGGGTTCAACAGTTCCGTCC 60.179 55.0 0.0 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2515 2629 1.552337 AGACCATGTACAGAGCCACAG 59.448 52.381 0.33 0.0 0.0 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.247861 AGCAAATTTTGAATAGGATGACTAAGT 57.752 29.630 13.26 0.00 34.79 2.24
28 29 9.508567 GCAAATTTTGAATAGGATGACTAAGTC 57.491 33.333 13.26 0.00 34.79 3.01
36 37 9.658799 TGAATAGGATGACTAAGTCTGAAAAAG 57.341 33.333 0.00 0.00 34.79 2.27
37 38 9.877178 GAATAGGATGACTAAGTCTGAAAAAGA 57.123 33.333 0.00 0.00 34.79 2.52
39 40 7.971183 AGGATGACTAAGTCTGAAAAAGAAC 57.029 36.000 0.00 0.00 36.40 3.01
40 41 7.740805 AGGATGACTAAGTCTGAAAAAGAACT 58.259 34.615 0.00 0.00 36.40 3.01
41 42 7.659390 AGGATGACTAAGTCTGAAAAAGAACTG 59.341 37.037 0.00 0.00 36.40 3.16
42 43 7.442666 GGATGACTAAGTCTGAAAAAGAACTGT 59.557 37.037 0.00 0.00 36.40 3.55
43 44 9.477484 GATGACTAAGTCTGAAAAAGAACTGTA 57.523 33.333 0.00 0.00 36.40 2.74
44 45 8.873215 TGACTAAGTCTGAAAAAGAACTGTAG 57.127 34.615 0.00 0.00 36.40 2.74
45 46 8.692710 TGACTAAGTCTGAAAAAGAACTGTAGA 58.307 33.333 0.00 0.00 36.40 2.59
46 47 9.530633 GACTAAGTCTGAAAAAGAACTGTAGAA 57.469 33.333 0.00 0.00 36.40 2.10
49 50 8.964476 AAGTCTGAAAAAGAACTGTAGAATCA 57.036 30.769 0.00 0.00 36.40 2.57
50 51 9.566432 AAGTCTGAAAAAGAACTGTAGAATCAT 57.434 29.630 0.00 0.00 36.40 2.45
51 52 8.997323 AGTCTGAAAAAGAACTGTAGAATCATG 58.003 33.333 0.00 0.00 36.40 3.07
52 53 8.993121 GTCTGAAAAAGAACTGTAGAATCATGA 58.007 33.333 0.00 0.00 36.40 3.07
53 54 9.730705 TCTGAAAAAGAACTGTAGAATCATGAT 57.269 29.630 1.18 1.18 29.54 2.45
54 55 9.985318 CTGAAAAAGAACTGTAGAATCATGATC 57.015 33.333 9.06 2.96 0.00 2.92
55 56 9.506018 TGAAAAAGAACTGTAGAATCATGATCA 57.494 29.630 9.06 0.00 0.00 2.92
58 59 9.512588 AAAAGAACTGTAGAATCATGATCAAGT 57.487 29.630 9.06 5.87 0.00 3.16
59 60 8.715191 AAGAACTGTAGAATCATGATCAAGTC 57.285 34.615 9.06 2.70 0.00 3.01
60 61 8.076910 AGAACTGTAGAATCATGATCAAGTCT 57.923 34.615 9.06 10.49 0.00 3.24
61 62 9.194972 AGAACTGTAGAATCATGATCAAGTCTA 57.805 33.333 9.06 9.48 0.00 2.59
62 63 9.809096 GAACTGTAGAATCATGATCAAGTCTAA 57.191 33.333 9.06 3.61 0.00 2.10
87 88 1.781786 AGCATCGGATGGTCAGTACT 58.218 50.000 16.45 1.90 35.90 2.73
88 89 1.683917 AGCATCGGATGGTCAGTACTC 59.316 52.381 16.45 0.00 35.90 2.59
89 90 1.409064 GCATCGGATGGTCAGTACTCA 59.591 52.381 18.96 0.00 0.00 3.41
90 91 2.544694 GCATCGGATGGTCAGTACTCAG 60.545 54.545 18.96 0.00 0.00 3.35
91 92 2.801077 TCGGATGGTCAGTACTCAGA 57.199 50.000 0.00 0.00 0.00 3.27
92 93 3.298686 TCGGATGGTCAGTACTCAGAT 57.701 47.619 0.00 0.00 0.00 2.90
93 94 4.432980 TCGGATGGTCAGTACTCAGATA 57.567 45.455 0.00 0.00 0.00 1.98
94 95 4.986783 TCGGATGGTCAGTACTCAGATAT 58.013 43.478 0.00 0.00 0.00 1.63
95 96 4.762251 TCGGATGGTCAGTACTCAGATATG 59.238 45.833 0.00 0.00 0.00 1.78
96 97 4.762251 CGGATGGTCAGTACTCAGATATGA 59.238 45.833 0.00 0.00 0.00 2.15
97 98 5.241728 CGGATGGTCAGTACTCAGATATGAA 59.758 44.000 0.00 0.00 0.00 2.57
98 99 6.071672 CGGATGGTCAGTACTCAGATATGAAT 60.072 42.308 0.00 0.00 0.00 2.57
99 100 7.121315 CGGATGGTCAGTACTCAGATATGAATA 59.879 40.741 0.00 0.00 0.00 1.75
100 101 8.465999 GGATGGTCAGTACTCAGATATGAATAG 58.534 40.741 0.00 0.00 0.00 1.73
101 102 7.220741 TGGTCAGTACTCAGATATGAATAGC 57.779 40.000 0.00 0.00 0.00 2.97
102 103 6.209589 TGGTCAGTACTCAGATATGAATAGCC 59.790 42.308 0.00 0.00 0.00 3.93
103 104 6.209589 GGTCAGTACTCAGATATGAATAGCCA 59.790 42.308 0.00 0.00 0.00 4.75
104 105 7.087639 GTCAGTACTCAGATATGAATAGCCAC 58.912 42.308 0.00 0.00 0.00 5.01
105 106 6.777580 TCAGTACTCAGATATGAATAGCCACA 59.222 38.462 0.00 0.00 0.00 4.17
106 107 7.452813 TCAGTACTCAGATATGAATAGCCACAT 59.547 37.037 0.00 0.00 0.00 3.21
107 108 7.758980 CAGTACTCAGATATGAATAGCCACATC 59.241 40.741 0.00 0.00 0.00 3.06
108 109 6.676990 ACTCAGATATGAATAGCCACATCA 57.323 37.500 0.00 0.00 0.00 3.07
109 110 7.255199 ACTCAGATATGAATAGCCACATCAT 57.745 36.000 0.00 0.00 37.54 2.45
110 111 7.104290 ACTCAGATATGAATAGCCACATCATG 58.896 38.462 0.00 0.00 35.53 3.07
111 112 7.038516 ACTCAGATATGAATAGCCACATCATGA 60.039 37.037 0.00 0.00 35.53 3.07
112 113 7.682628 TCAGATATGAATAGCCACATCATGAA 58.317 34.615 0.00 0.00 35.53 2.57
113 114 8.158789 TCAGATATGAATAGCCACATCATGAAA 58.841 33.333 0.00 0.00 35.53 2.69
114 115 8.957466 CAGATATGAATAGCCACATCATGAAAT 58.043 33.333 0.00 0.00 35.53 2.17
119 120 8.523915 TGAATAGCCACATCATGAAATAAACT 57.476 30.769 0.00 0.00 0.00 2.66
120 121 8.623903 TGAATAGCCACATCATGAAATAAACTC 58.376 33.333 0.00 0.00 0.00 3.01
121 122 8.523915 AATAGCCACATCATGAAATAAACTCA 57.476 30.769 0.00 0.00 0.00 3.41
122 123 6.199937 AGCCACATCATGAAATAAACTCAC 57.800 37.500 0.00 0.00 0.00 3.51
123 124 5.711506 AGCCACATCATGAAATAAACTCACA 59.288 36.000 0.00 0.00 0.00 3.58
124 125 6.209192 AGCCACATCATGAAATAAACTCACAA 59.791 34.615 0.00 0.00 0.00 3.33
125 126 7.037438 GCCACATCATGAAATAAACTCACAAT 58.963 34.615 0.00 0.00 0.00 2.71
126 127 8.190122 GCCACATCATGAAATAAACTCACAATA 58.810 33.333 0.00 0.00 0.00 1.90
127 128 9.726232 CCACATCATGAAATAAACTCACAATAG 57.274 33.333 0.00 0.00 0.00 1.73
128 129 9.229784 CACATCATGAAATAAACTCACAATAGC 57.770 33.333 0.00 0.00 0.00 2.97
129 130 9.182214 ACATCATGAAATAAACTCACAATAGCT 57.818 29.630 0.00 0.00 0.00 3.32
133 134 9.722056 CATGAAATAAACTCACAATAGCTTACC 57.278 33.333 0.00 0.00 0.00 2.85
134 135 8.856153 TGAAATAAACTCACAATAGCTTACCA 57.144 30.769 0.00 0.00 0.00 3.25
135 136 8.726988 TGAAATAAACTCACAATAGCTTACCAC 58.273 33.333 0.00 0.00 0.00 4.16
136 137 8.863872 AAATAAACTCACAATAGCTTACCACT 57.136 30.769 0.00 0.00 0.00 4.00
137 138 7.849804 ATAAACTCACAATAGCTTACCACTG 57.150 36.000 0.00 0.00 0.00 3.66
138 139 4.207891 ACTCACAATAGCTTACCACTGG 57.792 45.455 0.00 0.00 0.00 4.00
139 140 3.838317 ACTCACAATAGCTTACCACTGGA 59.162 43.478 0.71 0.00 0.00 3.86
140 141 4.286032 ACTCACAATAGCTTACCACTGGAA 59.714 41.667 0.71 0.00 0.00 3.53
141 142 4.575885 TCACAATAGCTTACCACTGGAAC 58.424 43.478 0.71 0.00 0.00 3.62
142 143 4.041075 TCACAATAGCTTACCACTGGAACA 59.959 41.667 0.71 0.00 0.00 3.18
143 144 4.759693 CACAATAGCTTACCACTGGAACAA 59.240 41.667 0.71 0.00 38.70 2.83
144 145 5.003804 ACAATAGCTTACCACTGGAACAAG 58.996 41.667 0.71 3.60 38.70 3.16
145 146 1.897560 AGCTTACCACTGGAACAAGC 58.102 50.000 18.36 18.36 41.47 4.01
146 147 1.142870 AGCTTACCACTGGAACAAGCA 59.857 47.619 23.60 0.00 43.15 3.91
147 148 1.953686 GCTTACCACTGGAACAAGCAA 59.046 47.619 19.90 0.00 40.96 3.91
148 149 2.360801 GCTTACCACTGGAACAAGCAAA 59.639 45.455 19.90 0.00 40.96 3.68
149 150 3.795488 GCTTACCACTGGAACAAGCAAAC 60.795 47.826 19.90 1.50 40.96 2.93
150 151 1.846007 ACCACTGGAACAAGCAAACA 58.154 45.000 0.71 0.00 38.70 2.83
151 152 2.387757 ACCACTGGAACAAGCAAACAT 58.612 42.857 0.71 0.00 38.70 2.71
152 153 2.765699 ACCACTGGAACAAGCAAACATT 59.234 40.909 0.71 0.00 38.70 2.71
153 154 3.125316 CCACTGGAACAAGCAAACATTG 58.875 45.455 0.00 0.00 38.70 2.82
154 155 3.430651 CCACTGGAACAAGCAAACATTGT 60.431 43.478 0.00 0.00 42.55 2.71
155 156 3.798337 CACTGGAACAAGCAAACATTGTC 59.202 43.478 0.00 0.00 39.91 3.18
156 157 3.181476 ACTGGAACAAGCAAACATTGTCC 60.181 43.478 0.00 0.00 39.91 4.02
157 158 3.030291 TGGAACAAGCAAACATTGTCCT 58.970 40.909 0.00 0.00 39.91 3.85
158 159 4.211125 TGGAACAAGCAAACATTGTCCTA 58.789 39.130 0.00 0.00 39.91 2.94
159 160 4.037446 TGGAACAAGCAAACATTGTCCTAC 59.963 41.667 0.00 0.00 39.91 3.18
160 161 4.037446 GGAACAAGCAAACATTGTCCTACA 59.963 41.667 0.00 0.00 39.91 2.74
161 162 5.278957 GGAACAAGCAAACATTGTCCTACAT 60.279 40.000 0.00 0.00 39.91 2.29
162 163 5.376854 ACAAGCAAACATTGTCCTACATC 57.623 39.130 0.00 0.00 36.10 3.06
163 164 5.072741 ACAAGCAAACATTGTCCTACATCT 58.927 37.500 0.00 0.00 36.10 2.90
164 165 5.048504 ACAAGCAAACATTGTCCTACATCTG 60.049 40.000 0.00 0.00 36.10 2.90
165 166 4.012374 AGCAAACATTGTCCTACATCTGG 58.988 43.478 0.00 0.00 0.00 3.86
166 167 4.009675 GCAAACATTGTCCTACATCTGGA 58.990 43.478 0.00 0.00 0.00 3.86
167 168 4.458989 GCAAACATTGTCCTACATCTGGAA 59.541 41.667 0.00 0.00 35.10 3.53
168 169 5.048083 GCAAACATTGTCCTACATCTGGAAA 60.048 40.000 0.00 0.00 35.10 3.13
169 170 6.516527 GCAAACATTGTCCTACATCTGGAAAA 60.517 38.462 0.00 0.00 35.50 2.29
170 171 7.605449 CAAACATTGTCCTACATCTGGAAAAT 58.395 34.615 0.00 0.00 40.99 1.82
171 172 8.739039 CAAACATTGTCCTACATCTGGAAAATA 58.261 33.333 0.00 0.00 38.96 1.40
172 173 8.877864 AACATTGTCCTACATCTGGAAAATAA 57.122 30.769 0.00 0.00 38.96 1.40
173 174 8.281212 ACATTGTCCTACATCTGGAAAATAAC 57.719 34.615 0.00 0.00 38.96 1.89
174 175 8.109634 ACATTGTCCTACATCTGGAAAATAACT 58.890 33.333 0.00 0.00 38.96 2.24
175 176 8.960591 CATTGTCCTACATCTGGAAAATAACTT 58.039 33.333 0.00 0.00 38.96 2.66
176 177 7.921786 TGTCCTACATCTGGAAAATAACTTG 57.078 36.000 0.00 0.00 35.10 3.16
177 178 7.685481 TGTCCTACATCTGGAAAATAACTTGA 58.315 34.615 0.00 0.00 35.10 3.02
178 179 8.328758 TGTCCTACATCTGGAAAATAACTTGAT 58.671 33.333 0.00 0.00 35.10 2.57
179 180 9.178758 GTCCTACATCTGGAAAATAACTTGATT 57.821 33.333 0.00 0.00 35.10 2.57
180 181 9.753674 TCCTACATCTGGAAAATAACTTGATTT 57.246 29.630 0.00 0.00 0.00 2.17
197 198 9.946165 AACTTGATTTTACTTAAGTTGCACTAC 57.054 29.630 14.49 1.37 40.65 2.73
198 199 9.116067 ACTTGATTTTACTTAAGTTGCACTACA 57.884 29.630 14.49 3.86 29.65 2.74
199 200 9.944663 CTTGATTTTACTTAAGTTGCACTACAA 57.055 29.630 14.49 10.63 35.33 2.41
206 207 7.308782 ACTTAAGTTGCACTACAATAGATGC 57.691 36.000 1.12 0.00 41.27 3.91
207 208 6.316390 ACTTAAGTTGCACTACAATAGATGCC 59.684 38.462 1.12 0.00 41.27 4.40
208 209 4.494091 AGTTGCACTACAATAGATGCCT 57.506 40.909 0.00 0.00 41.27 4.75
209 210 4.848357 AGTTGCACTACAATAGATGCCTT 58.152 39.130 0.00 0.00 41.27 4.35
210 211 5.256474 AGTTGCACTACAATAGATGCCTTT 58.744 37.500 0.00 0.00 41.27 3.11
211 212 5.355350 AGTTGCACTACAATAGATGCCTTTC 59.645 40.000 0.00 0.00 41.27 2.62
212 213 4.842574 TGCACTACAATAGATGCCTTTCA 58.157 39.130 0.00 0.00 34.28 2.69
213 214 4.877823 TGCACTACAATAGATGCCTTTCAG 59.122 41.667 0.00 0.00 34.28 3.02
214 215 4.260948 GCACTACAATAGATGCCTTTCAGC 60.261 45.833 0.00 0.00 31.28 4.26
215 216 4.274459 CACTACAATAGATGCCTTTCAGCC 59.726 45.833 0.00 0.00 0.00 4.85
216 217 2.659428 ACAATAGATGCCTTTCAGCCC 58.341 47.619 0.00 0.00 0.00 5.19
217 218 1.959282 CAATAGATGCCTTTCAGCCCC 59.041 52.381 0.00 0.00 0.00 5.80
218 219 1.225373 ATAGATGCCTTTCAGCCCCA 58.775 50.000 0.00 0.00 0.00 4.96
219 220 0.998928 TAGATGCCTTTCAGCCCCAA 59.001 50.000 0.00 0.00 0.00 4.12
220 221 0.613012 AGATGCCTTTCAGCCCCAAC 60.613 55.000 0.00 0.00 0.00 3.77
221 222 1.607801 GATGCCTTTCAGCCCCAACC 61.608 60.000 0.00 0.00 0.00 3.77
222 223 2.097978 ATGCCTTTCAGCCCCAACCT 62.098 55.000 0.00 0.00 0.00 3.50
223 224 2.278330 GCCTTTCAGCCCCAACCTG 61.278 63.158 0.00 0.00 0.00 4.00
224 225 2.278330 CCTTTCAGCCCCAACCTGC 61.278 63.158 0.00 0.00 0.00 4.85
225 226 2.203625 TTTCAGCCCCAACCTGCC 60.204 61.111 0.00 0.00 0.00 4.85
226 227 2.720144 CTTTCAGCCCCAACCTGCCT 62.720 60.000 0.00 0.00 0.00 4.75
227 228 1.431195 TTTCAGCCCCAACCTGCCTA 61.431 55.000 0.00 0.00 0.00 3.93
228 229 1.214305 TTCAGCCCCAACCTGCCTAT 61.214 55.000 0.00 0.00 0.00 2.57
229 230 1.214305 TCAGCCCCAACCTGCCTATT 61.214 55.000 0.00 0.00 0.00 1.73
230 231 0.550914 CAGCCCCAACCTGCCTATTA 59.449 55.000 0.00 0.00 0.00 0.98
231 232 0.551396 AGCCCCAACCTGCCTATTAC 59.449 55.000 0.00 0.00 0.00 1.89
232 233 0.551396 GCCCCAACCTGCCTATTACT 59.449 55.000 0.00 0.00 0.00 2.24
233 234 1.772453 GCCCCAACCTGCCTATTACTA 59.228 52.381 0.00 0.00 0.00 1.82
234 235 2.224548 GCCCCAACCTGCCTATTACTAG 60.225 54.545 0.00 0.00 0.00 2.57
235 236 3.046374 CCCCAACCTGCCTATTACTAGT 58.954 50.000 0.00 0.00 0.00 2.57
236 237 4.228824 CCCCAACCTGCCTATTACTAGTA 58.771 47.826 0.00 0.00 0.00 1.82
237 238 4.283722 CCCCAACCTGCCTATTACTAGTAG 59.716 50.000 2.23 0.00 0.00 2.57
238 239 4.900054 CCCAACCTGCCTATTACTAGTAGT 59.100 45.833 8.14 8.14 0.00 2.73
239 240 5.221461 CCCAACCTGCCTATTACTAGTAGTG 60.221 48.000 13.29 0.00 0.00 2.74
240 241 5.363005 CCAACCTGCCTATTACTAGTAGTGT 59.637 44.000 13.29 4.36 0.00 3.55
241 242 6.461231 CCAACCTGCCTATTACTAGTAGTGTC 60.461 46.154 13.29 0.00 0.00 3.67
242 243 4.820716 ACCTGCCTATTACTAGTAGTGTCG 59.179 45.833 13.29 0.00 0.00 4.35
243 244 5.061853 CCTGCCTATTACTAGTAGTGTCGA 58.938 45.833 13.29 0.00 0.00 4.20
244 245 5.530171 CCTGCCTATTACTAGTAGTGTCGAA 59.470 44.000 13.29 0.00 0.00 3.71
245 246 6.039047 CCTGCCTATTACTAGTAGTGTCGAAA 59.961 42.308 13.29 0.00 0.00 3.46
246 247 7.395190 TGCCTATTACTAGTAGTGTCGAAAA 57.605 36.000 13.29 0.00 0.00 2.29
247 248 7.253422 TGCCTATTACTAGTAGTGTCGAAAAC 58.747 38.462 13.29 0.00 0.00 2.43
248 249 6.413235 GCCTATTACTAGTAGTGTCGAAAACG 59.587 42.308 13.29 0.00 0.00 3.60
249 250 6.413235 CCTATTACTAGTAGTGTCGAAAACGC 59.587 42.308 13.29 0.00 38.74 4.84
251 252 3.819537 ACTAGTAGTGTCGAAAACGCTC 58.180 45.455 0.85 0.00 45.69 5.03
252 253 3.501445 ACTAGTAGTGTCGAAAACGCTCT 59.499 43.478 0.85 0.00 45.69 4.09
253 254 3.366440 AGTAGTGTCGAAAACGCTCTT 57.634 42.857 0.00 0.00 45.69 2.85
254 255 4.494350 AGTAGTGTCGAAAACGCTCTTA 57.506 40.909 0.00 0.00 45.69 2.10
255 256 5.056894 AGTAGTGTCGAAAACGCTCTTAT 57.943 39.130 0.00 0.00 45.69 1.73
256 257 5.094134 AGTAGTGTCGAAAACGCTCTTATC 58.906 41.667 0.00 0.00 45.69 1.75
257 258 4.175787 AGTGTCGAAAACGCTCTTATCT 57.824 40.909 0.00 0.00 45.69 1.98
258 259 4.557205 AGTGTCGAAAACGCTCTTATCTT 58.443 39.130 0.00 0.00 45.69 2.40
259 260 5.706916 AGTGTCGAAAACGCTCTTATCTTA 58.293 37.500 0.00 0.00 45.69 2.10
260 261 6.331061 AGTGTCGAAAACGCTCTTATCTTAT 58.669 36.000 0.00 0.00 45.69 1.73
261 262 6.253727 AGTGTCGAAAACGCTCTTATCTTATG 59.746 38.462 0.00 0.00 45.69 1.90
262 263 6.252869 GTGTCGAAAACGCTCTTATCTTATGA 59.747 38.462 0.00 0.00 35.42 2.15
263 264 6.472486 TGTCGAAAACGCTCTTATCTTATGAG 59.528 38.462 0.00 0.00 34.20 2.90
264 265 6.691818 GTCGAAAACGCTCTTATCTTATGAGA 59.308 38.462 0.00 0.00 33.20 3.27
265 266 6.691818 TCGAAAACGCTCTTATCTTATGAGAC 59.308 38.462 0.00 0.00 33.99 3.36
266 267 6.344312 CGAAAACGCTCTTATCTTATGAGACG 60.344 42.308 0.00 0.00 36.53 4.18
267 268 4.491234 ACGCTCTTATCTTATGAGACGG 57.509 45.455 0.00 0.00 35.72 4.79
268 269 4.135306 ACGCTCTTATCTTATGAGACGGA 58.865 43.478 0.00 0.00 35.72 4.69
269 270 4.214545 ACGCTCTTATCTTATGAGACGGAG 59.785 45.833 0.00 0.00 35.72 4.63
270 271 4.378978 CGCTCTTATCTTATGAGACGGAGG 60.379 50.000 12.02 3.40 33.99 4.30
271 272 4.082463 GCTCTTATCTTATGAGACGGAGGG 60.082 50.000 12.02 3.53 33.99 4.30
272 273 5.317808 CTCTTATCTTATGAGACGGAGGGA 58.682 45.833 0.00 0.00 33.99 4.20
273 274 5.317808 TCTTATCTTATGAGACGGAGGGAG 58.682 45.833 0.00 0.00 33.99 4.30
274 275 3.603965 ATCTTATGAGACGGAGGGAGT 57.396 47.619 0.00 0.00 33.99 3.85
275 276 4.726035 ATCTTATGAGACGGAGGGAGTA 57.274 45.455 0.00 0.00 33.99 2.59
276 277 3.818180 TCTTATGAGACGGAGGGAGTAC 58.182 50.000 0.00 0.00 0.00 2.73
277 278 3.458857 TCTTATGAGACGGAGGGAGTACT 59.541 47.826 0.00 0.00 0.00 2.73
278 279 2.830651 ATGAGACGGAGGGAGTACTT 57.169 50.000 0.00 0.00 0.00 2.24
279 280 2.599408 TGAGACGGAGGGAGTACTTT 57.401 50.000 0.00 0.00 0.00 2.66
280 281 2.885616 TGAGACGGAGGGAGTACTTTT 58.114 47.619 0.00 0.00 0.00 2.27
281 282 2.561419 TGAGACGGAGGGAGTACTTTTG 59.439 50.000 0.00 0.00 0.00 2.44
282 283 2.561858 GAGACGGAGGGAGTACTTTTGT 59.438 50.000 0.00 0.00 0.00 2.83
283 284 3.760684 GAGACGGAGGGAGTACTTTTGTA 59.239 47.826 0.00 0.00 0.00 2.41
334 335 9.892130 ACATCTTAAATTAGTTTACAGAGGGAG 57.108 33.333 13.49 1.15 31.17 4.30
335 336 9.892130 CATCTTAAATTAGTTTACAGAGGGAGT 57.108 33.333 0.00 0.00 29.82 3.85
340 341 7.793948 AATTAGTTTACAGAGGGAGTAGTGT 57.206 36.000 0.00 0.00 0.00 3.55
341 342 6.585695 TTAGTTTACAGAGGGAGTAGTGTG 57.414 41.667 0.00 0.00 0.00 3.82
342 343 4.481072 AGTTTACAGAGGGAGTAGTGTGT 58.519 43.478 0.00 0.00 0.00 3.72
343 344 5.638133 AGTTTACAGAGGGAGTAGTGTGTA 58.362 41.667 0.00 0.00 0.00 2.90
344 345 5.711036 AGTTTACAGAGGGAGTAGTGTGTAG 59.289 44.000 0.00 0.00 0.00 2.74
345 346 5.509832 TTACAGAGGGAGTAGTGTGTAGA 57.490 43.478 0.00 0.00 0.00 2.59
346 347 4.383931 ACAGAGGGAGTAGTGTGTAGAA 57.616 45.455 0.00 0.00 0.00 2.10
347 348 4.080687 ACAGAGGGAGTAGTGTGTAGAAC 58.919 47.826 0.00 0.00 0.00 3.01
348 349 4.202588 ACAGAGGGAGTAGTGTGTAGAACT 60.203 45.833 0.00 0.00 0.00 3.01
349 350 4.767928 CAGAGGGAGTAGTGTGTAGAACTT 59.232 45.833 0.00 0.00 0.00 2.66
350 351 5.011586 AGAGGGAGTAGTGTGTAGAACTTC 58.988 45.833 0.00 0.00 0.00 3.01
351 352 4.087907 AGGGAGTAGTGTGTAGAACTTCC 58.912 47.826 0.00 0.00 37.82 3.46
352 353 4.087907 GGGAGTAGTGTGTAGAACTTCCT 58.912 47.826 0.00 0.00 35.12 3.36
353 354 5.014966 AGGGAGTAGTGTGTAGAACTTCCTA 59.985 44.000 0.00 0.00 44.61 2.94
354 355 5.713861 GGGAGTAGTGTGTAGAACTTCCTAA 59.286 44.000 0.00 0.00 35.12 2.69
355 356 6.380560 GGGAGTAGTGTGTAGAACTTCCTAAT 59.619 42.308 0.00 0.00 35.12 1.73
356 357 7.093421 GGGAGTAGTGTGTAGAACTTCCTAATT 60.093 40.741 0.00 0.00 35.12 1.40
357 358 7.760340 GGAGTAGTGTGTAGAACTTCCTAATTG 59.240 40.741 0.00 0.00 0.00 2.32
358 359 8.191534 AGTAGTGTGTAGAACTTCCTAATTGT 57.808 34.615 0.00 0.00 0.00 2.71
359 360 8.648693 AGTAGTGTGTAGAACTTCCTAATTGTT 58.351 33.333 0.00 0.00 0.00 2.83
360 361 7.964604 AGTGTGTAGAACTTCCTAATTGTTC 57.035 36.000 0.00 0.00 40.00 3.18
362 363 7.873505 AGTGTGTAGAACTTCCTAATTGTTCTC 59.126 37.037 10.44 5.34 44.65 2.87
363 364 7.656137 GTGTGTAGAACTTCCTAATTGTTCTCA 59.344 37.037 10.44 7.23 44.65 3.27
364 365 8.208224 TGTGTAGAACTTCCTAATTGTTCTCAA 58.792 33.333 10.44 0.68 44.65 3.02
365 366 9.220767 GTGTAGAACTTCCTAATTGTTCTCAAT 57.779 33.333 10.44 0.00 44.65 2.57
387 388 8.547894 TCAATTCTGTATGTAATATCGTTGTGC 58.452 33.333 0.00 0.00 0.00 4.57
388 389 8.551205 CAATTCTGTATGTAATATCGTTGTGCT 58.449 33.333 0.00 0.00 0.00 4.40
389 390 8.662781 ATTCTGTATGTAATATCGTTGTGCTT 57.337 30.769 0.00 0.00 0.00 3.91
390 391 9.758651 ATTCTGTATGTAATATCGTTGTGCTTA 57.241 29.630 0.00 0.00 0.00 3.09
391 392 9.758651 TTCTGTATGTAATATCGTTGTGCTTAT 57.241 29.630 0.00 0.00 0.00 1.73
392 393 9.758651 TCTGTATGTAATATCGTTGTGCTTATT 57.241 29.630 0.00 0.00 0.00 1.40
393 394 9.797473 CTGTATGTAATATCGTTGTGCTTATTG 57.203 33.333 0.00 0.00 0.00 1.90
394 395 8.279800 TGTATGTAATATCGTTGTGCTTATTGC 58.720 33.333 0.00 0.00 43.25 3.56
395 396 6.918892 TGTAATATCGTTGTGCTTATTGCT 57.081 33.333 0.00 0.00 43.37 3.91
396 397 6.943981 TGTAATATCGTTGTGCTTATTGCTC 58.056 36.000 0.00 0.00 43.37 4.26
397 398 6.536941 TGTAATATCGTTGTGCTTATTGCTCA 59.463 34.615 0.00 0.00 42.51 4.26
398 399 5.663795 ATATCGTTGTGCTTATTGCTCAG 57.336 39.130 0.00 0.00 44.47 3.35
399 400 1.464608 TCGTTGTGCTTATTGCTCAGC 59.535 47.619 0.00 0.00 44.47 4.26
400 401 1.466167 CGTTGTGCTTATTGCTCAGCT 59.534 47.619 0.00 0.00 44.47 4.24
401 402 2.475187 CGTTGTGCTTATTGCTCAGCTC 60.475 50.000 0.00 0.00 44.47 4.09
402 403 2.746362 GTTGTGCTTATTGCTCAGCTCT 59.254 45.455 0.00 0.00 44.47 4.09
403 404 2.353323 TGTGCTTATTGCTCAGCTCTG 58.647 47.619 0.00 0.00 39.83 3.35
404 405 1.063764 GTGCTTATTGCTCAGCTCTGC 59.936 52.381 0.00 0.83 43.37 4.26
405 406 1.339342 TGCTTATTGCTCAGCTCTGCA 60.339 47.619 0.00 6.10 43.37 4.41
406 407 1.063764 GCTTATTGCTCAGCTCTGCAC 59.936 52.381 9.40 0.00 39.05 4.57
407 408 2.353323 CTTATTGCTCAGCTCTGCACA 58.647 47.619 9.40 3.15 39.05 4.57
408 409 2.019948 TATTGCTCAGCTCTGCACAG 57.980 50.000 9.40 0.00 39.05 3.66
409 410 1.306642 ATTGCTCAGCTCTGCACAGC 61.307 55.000 5.74 5.74 39.05 4.40
410 411 2.358369 GCTCAGCTCTGCACAGCA 60.358 61.111 16.68 0.00 42.40 4.41
411 412 1.745864 GCTCAGCTCTGCACAGCAT 60.746 57.895 16.68 0.00 42.40 3.79
412 413 0.461516 GCTCAGCTCTGCACAGCATA 60.462 55.000 16.68 2.59 42.40 3.14
413 414 1.810794 GCTCAGCTCTGCACAGCATAT 60.811 52.381 16.68 0.00 42.40 1.78
414 415 2.562635 CTCAGCTCTGCACAGCATATT 58.437 47.619 16.68 0.00 42.40 1.28
415 416 2.544686 CTCAGCTCTGCACAGCATATTC 59.455 50.000 16.68 0.00 42.40 1.75
416 417 2.093341 TCAGCTCTGCACAGCATATTCA 60.093 45.455 16.68 0.00 42.40 2.57
417 418 2.288186 CAGCTCTGCACAGCATATTCAG 59.712 50.000 16.68 0.00 42.40 3.02
418 419 2.169978 AGCTCTGCACAGCATATTCAGA 59.830 45.455 16.68 0.00 42.40 3.27
419 420 3.139850 GCTCTGCACAGCATATTCAGAT 58.860 45.455 9.30 0.00 38.13 2.90
420 421 3.058846 GCTCTGCACAGCATATTCAGATG 60.059 47.826 9.30 0.00 38.13 2.90
421 422 4.377897 CTCTGCACAGCATATTCAGATGA 58.622 43.478 0.00 0.00 38.13 2.92
422 423 4.969484 TCTGCACAGCATATTCAGATGAT 58.031 39.130 0.00 0.00 38.13 2.45
423 424 5.374071 TCTGCACAGCATATTCAGATGATT 58.626 37.500 0.00 0.00 38.13 2.57
424 425 5.826208 TCTGCACAGCATATTCAGATGATTT 59.174 36.000 0.00 0.00 38.13 2.17
425 426 6.993902 TCTGCACAGCATATTCAGATGATTTA 59.006 34.615 0.00 0.00 38.13 1.40
426 427 6.962686 TGCACAGCATATTCAGATGATTTAC 58.037 36.000 0.00 0.00 31.71 2.01
427 428 6.543100 TGCACAGCATATTCAGATGATTTACA 59.457 34.615 0.00 0.00 31.71 2.41
428 429 7.076362 GCACAGCATATTCAGATGATTTACAG 58.924 38.462 0.00 0.00 0.00 2.74
429 430 7.255035 GCACAGCATATTCAGATGATTTACAGT 60.255 37.037 0.00 0.00 0.00 3.55
430 431 9.264719 CACAGCATATTCAGATGATTTACAGTA 57.735 33.333 0.00 0.00 0.00 2.74
431 432 9.836864 ACAGCATATTCAGATGATTTACAGTAA 57.163 29.630 0.00 0.00 0.00 2.24
438 439 8.902540 TTCAGATGATTTACAGTAAACACACT 57.097 30.769 7.95 8.69 0.00 3.55
449 450 6.239908 CAGTAAACACACTGTGATAATGCA 57.760 37.500 16.30 0.00 40.89 3.96
450 451 6.845302 CAGTAAACACACTGTGATAATGCAT 58.155 36.000 16.30 0.00 40.89 3.96
451 452 6.744082 CAGTAAACACACTGTGATAATGCATG 59.256 38.462 16.30 1.99 40.89 4.06
452 453 5.963176 AAACACACTGTGATAATGCATGA 57.037 34.783 16.30 0.00 36.96 3.07
453 454 6.519679 AAACACACTGTGATAATGCATGAT 57.480 33.333 16.30 0.00 36.96 2.45
454 455 7.628769 AAACACACTGTGATAATGCATGATA 57.371 32.000 16.30 0.00 36.96 2.15
455 456 6.856135 ACACACTGTGATAATGCATGATAG 57.144 37.500 16.30 0.00 36.96 2.08
456 457 6.351711 ACACACTGTGATAATGCATGATAGT 58.648 36.000 16.30 0.00 36.96 2.12
457 458 7.500141 ACACACTGTGATAATGCATGATAGTA 58.500 34.615 16.30 0.00 36.96 1.82
458 459 7.986889 ACACACTGTGATAATGCATGATAGTAA 59.013 33.333 16.30 0.00 36.96 2.24
459 460 8.996271 CACACTGTGATAATGCATGATAGTAAT 58.004 33.333 15.86 0.00 35.23 1.89
470 471 7.889589 TGCATGATAGTAATATTCTTGTCGG 57.110 36.000 0.00 0.00 0.00 4.79
471 472 7.441836 TGCATGATAGTAATATTCTTGTCGGT 58.558 34.615 0.00 0.00 0.00 4.69
472 473 7.598869 TGCATGATAGTAATATTCTTGTCGGTC 59.401 37.037 0.00 0.00 0.00 4.79
473 474 7.598869 GCATGATAGTAATATTCTTGTCGGTCA 59.401 37.037 0.00 0.00 0.00 4.02
474 475 9.645059 CATGATAGTAATATTCTTGTCGGTCAT 57.355 33.333 0.00 0.00 0.00 3.06
476 477 9.692749 TGATAGTAATATTCTTGTCGGTCATTC 57.307 33.333 0.00 0.00 0.00 2.67
477 478 9.915629 GATAGTAATATTCTTGTCGGTCATTCT 57.084 33.333 0.00 0.00 0.00 2.40
480 481 9.751542 AGTAATATTCTTGTCGGTCATTCTAAG 57.248 33.333 0.00 0.00 0.00 2.18
481 482 7.484035 AATATTCTTGTCGGTCATTCTAAGC 57.516 36.000 0.00 0.00 0.00 3.09
482 483 3.247006 TCTTGTCGGTCATTCTAAGCC 57.753 47.619 0.00 0.00 0.00 4.35
483 484 2.093658 TCTTGTCGGTCATTCTAAGCCC 60.094 50.000 0.00 0.00 0.00 5.19
484 485 1.271856 TGTCGGTCATTCTAAGCCCA 58.728 50.000 0.00 0.00 0.00 5.36
485 486 1.066430 TGTCGGTCATTCTAAGCCCAC 60.066 52.381 0.00 0.00 0.00 4.61
486 487 1.066430 GTCGGTCATTCTAAGCCCACA 60.066 52.381 0.00 0.00 0.00 4.17
487 488 1.207089 TCGGTCATTCTAAGCCCACAG 59.793 52.381 0.00 0.00 0.00 3.66
488 489 1.743772 CGGTCATTCTAAGCCCACAGG 60.744 57.143 0.00 0.00 0.00 4.00
503 504 5.836024 CCCACAGGCCTATAACCTATAAA 57.164 43.478 3.98 0.00 35.10 1.40
504 505 5.557866 CCCACAGGCCTATAACCTATAAAC 58.442 45.833 3.98 0.00 35.10 2.01
505 506 5.235516 CCACAGGCCTATAACCTATAAACG 58.764 45.833 3.98 0.00 35.10 3.60
506 507 5.011329 CCACAGGCCTATAACCTATAAACGA 59.989 44.000 3.98 0.00 35.10 3.85
507 508 6.463331 CCACAGGCCTATAACCTATAAACGAA 60.463 42.308 3.98 0.00 35.10 3.85
508 509 6.423001 CACAGGCCTATAACCTATAAACGAAC 59.577 42.308 3.98 0.00 35.10 3.95
509 510 5.930569 CAGGCCTATAACCTATAAACGAACC 59.069 44.000 3.98 0.00 35.10 3.62
510 511 5.012458 AGGCCTATAACCTATAAACGAACCC 59.988 44.000 1.29 0.00 35.10 4.11
511 512 5.221702 GGCCTATAACCTATAAACGAACCCA 60.222 44.000 0.00 0.00 0.00 4.51
512 513 5.930569 GCCTATAACCTATAAACGAACCCAG 59.069 44.000 0.00 0.00 0.00 4.45
513 514 5.930569 CCTATAACCTATAAACGAACCCAGC 59.069 44.000 0.00 0.00 0.00 4.85
514 515 3.706600 AACCTATAAACGAACCCAGCA 57.293 42.857 0.00 0.00 0.00 4.41
515 516 3.706600 ACCTATAAACGAACCCAGCAA 57.293 42.857 0.00 0.00 0.00 3.91
516 517 4.230745 ACCTATAAACGAACCCAGCAAT 57.769 40.909 0.00 0.00 0.00 3.56
517 518 3.945285 ACCTATAAACGAACCCAGCAATG 59.055 43.478 0.00 0.00 0.00 2.82
518 519 4.196193 CCTATAAACGAACCCAGCAATGA 58.804 43.478 0.00 0.00 0.00 2.57
519 520 4.638421 CCTATAAACGAACCCAGCAATGAA 59.362 41.667 0.00 0.00 0.00 2.57
520 521 4.701956 ATAAACGAACCCAGCAATGAAG 57.298 40.909 0.00 0.00 0.00 3.02
521 522 2.270352 AACGAACCCAGCAATGAAGA 57.730 45.000 0.00 0.00 0.00 2.87
522 523 1.523758 ACGAACCCAGCAATGAAGAC 58.476 50.000 0.00 0.00 0.00 3.01
523 524 1.202758 ACGAACCCAGCAATGAAGACA 60.203 47.619 0.00 0.00 0.00 3.41
524 525 1.879380 CGAACCCAGCAATGAAGACAA 59.121 47.619 0.00 0.00 0.00 3.18
525 526 2.095567 CGAACCCAGCAATGAAGACAAG 60.096 50.000 0.00 0.00 0.00 3.16
526 527 2.957402 ACCCAGCAATGAAGACAAGA 57.043 45.000 0.00 0.00 0.00 3.02
527 528 3.446442 ACCCAGCAATGAAGACAAGAT 57.554 42.857 0.00 0.00 0.00 2.40
528 529 4.574674 ACCCAGCAATGAAGACAAGATA 57.425 40.909 0.00 0.00 0.00 1.98
529 530 4.521146 ACCCAGCAATGAAGACAAGATAG 58.479 43.478 0.00 0.00 0.00 2.08
530 531 4.018960 ACCCAGCAATGAAGACAAGATAGT 60.019 41.667 0.00 0.00 0.00 2.12
531 532 4.334759 CCCAGCAATGAAGACAAGATAGTG 59.665 45.833 0.00 0.00 0.00 2.74
532 533 5.181009 CCAGCAATGAAGACAAGATAGTGA 58.819 41.667 0.00 0.00 0.00 3.41
533 534 5.064452 CCAGCAATGAAGACAAGATAGTGAC 59.936 44.000 0.00 0.00 0.00 3.67
534 535 5.873712 CAGCAATGAAGACAAGATAGTGACT 59.126 40.000 0.00 0.00 0.00 3.41
535 536 6.035866 CAGCAATGAAGACAAGATAGTGACTC 59.964 42.308 0.00 0.00 0.00 3.36
536 537 5.871524 GCAATGAAGACAAGATAGTGACTCA 59.128 40.000 0.00 0.00 0.00 3.41
537 538 6.538021 GCAATGAAGACAAGATAGTGACTCAT 59.462 38.462 0.00 0.00 0.00 2.90
538 539 7.465647 GCAATGAAGACAAGATAGTGACTCATG 60.466 40.741 0.00 0.00 0.00 3.07
539 540 6.840780 TGAAGACAAGATAGTGACTCATGA 57.159 37.500 0.00 0.00 0.00 3.07
540 541 7.415592 TGAAGACAAGATAGTGACTCATGAT 57.584 36.000 0.00 0.00 0.00 2.45
541 542 7.487484 TGAAGACAAGATAGTGACTCATGATC 58.513 38.462 0.00 0.00 0.00 2.92
542 543 7.123247 TGAAGACAAGATAGTGACTCATGATCA 59.877 37.037 0.00 0.00 0.00 2.92
543 544 7.041635 AGACAAGATAGTGACTCATGATCAG 57.958 40.000 0.09 0.00 0.00 2.90
544 545 6.606796 AGACAAGATAGTGACTCATGATCAGT 59.393 38.462 15.34 15.34 34.15 3.41
545 546 6.804677 ACAAGATAGTGACTCATGATCAGTC 58.195 40.000 14.76 11.14 40.75 3.51
546 547 6.183360 ACAAGATAGTGACTCATGATCAGTCC 60.183 42.308 14.76 10.40 39.78 3.85
547 548 5.453158 AGATAGTGACTCATGATCAGTCCA 58.547 41.667 14.76 4.40 39.78 4.02
548 549 3.883830 AGTGACTCATGATCAGTCCAC 57.116 47.619 10.19 8.93 39.78 4.02
549 550 3.439154 AGTGACTCATGATCAGTCCACT 58.561 45.455 10.19 10.64 39.78 4.00
550 551 3.837146 AGTGACTCATGATCAGTCCACTT 59.163 43.478 10.19 0.00 39.78 3.16
551 552 3.931468 GTGACTCATGATCAGTCCACTTG 59.069 47.826 10.19 0.00 39.78 3.16
552 553 3.580022 TGACTCATGATCAGTCCACTTGT 59.420 43.478 10.19 0.00 39.78 3.16
553 554 4.772100 TGACTCATGATCAGTCCACTTGTA 59.228 41.667 10.19 0.00 39.78 2.41
554 555 5.105595 TGACTCATGATCAGTCCACTTGTAG 60.106 44.000 10.19 1.51 39.78 2.74
555 556 5.019470 ACTCATGATCAGTCCACTTGTAGA 58.981 41.667 0.09 0.00 0.00 2.59
556 557 5.481824 ACTCATGATCAGTCCACTTGTAGAA 59.518 40.000 0.09 0.00 0.00 2.10
557 558 6.014242 ACTCATGATCAGTCCACTTGTAGAAA 60.014 38.462 0.09 0.00 0.00 2.52
558 559 6.950842 TCATGATCAGTCCACTTGTAGAAAT 58.049 36.000 0.09 0.00 0.00 2.17
559 560 7.044181 TCATGATCAGTCCACTTGTAGAAATC 58.956 38.462 0.09 0.00 0.00 2.17
560 561 6.358974 TGATCAGTCCACTTGTAGAAATCA 57.641 37.500 0.00 0.00 0.00 2.57
561 562 6.768483 TGATCAGTCCACTTGTAGAAATCAA 58.232 36.000 0.00 0.00 0.00 2.57
562 563 6.875726 TGATCAGTCCACTTGTAGAAATCAAG 59.124 38.462 0.00 4.45 45.15 3.02
572 573 7.912056 CTTGTAGAAATCAAGTTCATCCTCA 57.088 36.000 0.00 0.00 37.90 3.86
573 574 8.503458 CTTGTAGAAATCAAGTTCATCCTCAT 57.497 34.615 0.00 0.00 37.90 2.90
574 575 8.868522 TTGTAGAAATCAAGTTCATCCTCATT 57.131 30.769 0.00 0.00 0.00 2.57
575 576 8.498054 TGTAGAAATCAAGTTCATCCTCATTC 57.502 34.615 0.00 0.00 0.00 2.67
576 577 7.554118 TGTAGAAATCAAGTTCATCCTCATTCC 59.446 37.037 0.00 0.00 0.00 3.01
577 578 6.729428 AGAAATCAAGTTCATCCTCATTCCT 58.271 36.000 0.00 0.00 0.00 3.36
578 579 6.602406 AGAAATCAAGTTCATCCTCATTCCTG 59.398 38.462 0.00 0.00 0.00 3.86
579 580 5.705397 ATCAAGTTCATCCTCATTCCTGA 57.295 39.130 0.00 0.00 0.00 3.86
580 581 5.503634 TCAAGTTCATCCTCATTCCTGAA 57.496 39.130 0.00 0.00 0.00 3.02
581 582 5.248640 TCAAGTTCATCCTCATTCCTGAAC 58.751 41.667 6.23 6.23 44.89 3.18
584 585 5.096443 GTTCATCCTCATTCCTGAACTCT 57.904 43.478 6.95 0.00 42.53 3.24
585 586 6.227298 GTTCATCCTCATTCCTGAACTCTA 57.773 41.667 6.95 0.00 42.53 2.43
586 587 6.644347 GTTCATCCTCATTCCTGAACTCTAA 58.356 40.000 6.95 0.00 42.53 2.10
587 588 6.227298 TCATCCTCATTCCTGAACTCTAAC 57.773 41.667 0.00 0.00 0.00 2.34
588 589 5.129485 TCATCCTCATTCCTGAACTCTAACC 59.871 44.000 0.00 0.00 0.00 2.85
589 590 4.689062 TCCTCATTCCTGAACTCTAACCT 58.311 43.478 0.00 0.00 0.00 3.50
590 591 5.838955 TCCTCATTCCTGAACTCTAACCTA 58.161 41.667 0.00 0.00 0.00 3.08
591 592 5.657302 TCCTCATTCCTGAACTCTAACCTAC 59.343 44.000 0.00 0.00 0.00 3.18
592 593 5.422331 CCTCATTCCTGAACTCTAACCTACA 59.578 44.000 0.00 0.00 0.00 2.74
593 594 6.070767 CCTCATTCCTGAACTCTAACCTACAA 60.071 42.308 0.00 0.00 0.00 2.41
594 595 7.311092 TCATTCCTGAACTCTAACCTACAAA 57.689 36.000 0.00 0.00 0.00 2.83
595 596 7.741785 TCATTCCTGAACTCTAACCTACAAAA 58.258 34.615 0.00 0.00 0.00 2.44
596 597 8.383175 TCATTCCTGAACTCTAACCTACAAAAT 58.617 33.333 0.00 0.00 0.00 1.82
597 598 9.014297 CATTCCTGAACTCTAACCTACAAAATT 57.986 33.333 0.00 0.00 0.00 1.82
600 601 9.886132 TCCTGAACTCTAACCTACAAAATTATC 57.114 33.333 0.00 0.00 0.00 1.75
601 602 9.667107 CCTGAACTCTAACCTACAAAATTATCA 57.333 33.333 0.00 0.00 0.00 2.15
611 612 8.515473 ACCTACAAAATTATCAAGTTTTTCGC 57.485 30.769 0.00 0.00 0.00 4.70
612 613 8.357402 ACCTACAAAATTATCAAGTTTTTCGCT 58.643 29.630 0.00 0.00 0.00 4.93
613 614 9.834628 CCTACAAAATTATCAAGTTTTTCGCTA 57.165 29.630 0.00 0.00 0.00 4.26
615 616 8.211198 ACAAAATTATCAAGTTTTTCGCTACG 57.789 30.769 0.00 0.00 0.00 3.51
616 617 6.848470 AAATTATCAAGTTTTTCGCTACGC 57.152 33.333 0.00 0.00 0.00 4.42
617 618 5.796350 ATTATCAAGTTTTTCGCTACGCT 57.204 34.783 0.00 0.00 0.00 5.07
618 619 5.600908 TTATCAAGTTTTTCGCTACGCTT 57.399 34.783 0.00 0.00 0.00 4.68
619 620 3.955771 TCAAGTTTTTCGCTACGCTTT 57.044 38.095 0.00 0.00 0.00 3.51
620 621 5.600908 ATCAAGTTTTTCGCTACGCTTTA 57.399 34.783 0.00 0.00 0.00 1.85
621 622 4.764940 TCAAGTTTTTCGCTACGCTTTAC 58.235 39.130 0.00 0.00 0.00 2.01
622 623 4.270566 TCAAGTTTTTCGCTACGCTTTACA 59.729 37.500 0.00 0.00 0.00 2.41
623 624 4.799419 AGTTTTTCGCTACGCTTTACAA 57.201 36.364 0.00 0.00 0.00 2.41
624 625 5.352643 AGTTTTTCGCTACGCTTTACAAT 57.647 34.783 0.00 0.00 0.00 2.71
625 626 5.379827 AGTTTTTCGCTACGCTTTACAATC 58.620 37.500 0.00 0.00 0.00 2.67
626 627 4.994220 TTTTCGCTACGCTTTACAATCA 57.006 36.364 0.00 0.00 0.00 2.57
627 628 5.539582 TTTTCGCTACGCTTTACAATCAT 57.460 34.783 0.00 0.00 0.00 2.45
628 629 4.514545 TTCGCTACGCTTTACAATCATG 57.485 40.909 0.00 0.00 0.00 3.07
629 630 2.863740 TCGCTACGCTTTACAATCATGG 59.136 45.455 0.00 0.00 0.00 3.66
630 631 2.032894 CGCTACGCTTTACAATCATGGG 60.033 50.000 0.00 0.00 0.00 4.00
631 632 2.943033 GCTACGCTTTACAATCATGGGT 59.057 45.455 0.00 0.00 0.00 4.51
632 633 3.377172 GCTACGCTTTACAATCATGGGTT 59.623 43.478 0.00 0.00 0.00 4.11
633 634 4.495844 GCTACGCTTTACAATCATGGGTTC 60.496 45.833 0.00 0.00 0.00 3.62
634 635 3.417101 ACGCTTTACAATCATGGGTTCA 58.583 40.909 0.00 0.00 0.00 3.18
635 636 3.823873 ACGCTTTACAATCATGGGTTCAA 59.176 39.130 0.00 0.00 0.00 2.69
636 637 4.165779 CGCTTTACAATCATGGGTTCAAC 58.834 43.478 0.00 0.00 0.00 3.18
637 638 4.320861 CGCTTTACAATCATGGGTTCAACA 60.321 41.667 0.00 0.00 0.00 3.33
638 639 5.163513 GCTTTACAATCATGGGTTCAACAG 58.836 41.667 0.00 0.00 0.00 3.16
639 640 5.278957 GCTTTACAATCATGGGTTCAACAGT 60.279 40.000 0.00 0.00 0.00 3.55
640 641 6.723298 TTTACAATCATGGGTTCAACAGTT 57.277 33.333 0.00 0.00 0.00 3.16
641 642 4.853924 ACAATCATGGGTTCAACAGTTC 57.146 40.909 0.00 0.00 0.00 3.01
642 643 3.573967 ACAATCATGGGTTCAACAGTTCC 59.426 43.478 0.00 0.00 0.00 3.62
643 644 1.890876 TCATGGGTTCAACAGTTCCG 58.109 50.000 0.00 0.00 0.00 4.30
644 645 1.142060 TCATGGGTTCAACAGTTCCGT 59.858 47.619 0.00 0.00 0.00 4.69
645 646 1.535462 CATGGGTTCAACAGTTCCGTC 59.465 52.381 0.00 0.00 0.00 4.79
646 647 0.179040 TGGGTTCAACAGTTCCGTCC 60.179 55.000 0.00 0.00 0.00 4.79
647 648 0.179040 GGGTTCAACAGTTCCGTCCA 60.179 55.000 0.00 0.00 0.00 4.02
648 649 1.226746 GGTTCAACAGTTCCGTCCAG 58.773 55.000 0.00 0.00 0.00 3.86
649 650 1.226746 GTTCAACAGTTCCGTCCAGG 58.773 55.000 0.00 0.00 42.97 4.45
650 651 0.834612 TTCAACAGTTCCGTCCAGGT 59.165 50.000 0.00 0.00 41.99 4.00
651 652 1.707106 TCAACAGTTCCGTCCAGGTA 58.293 50.000 0.00 0.00 41.99 3.08
652 653 1.616865 TCAACAGTTCCGTCCAGGTAG 59.383 52.381 0.00 0.00 41.99 3.18
653 654 0.320697 AACAGTTCCGTCCAGGTAGC 59.679 55.000 0.00 0.00 41.99 3.58
654 655 0.830444 ACAGTTCCGTCCAGGTAGCA 60.830 55.000 0.00 0.00 41.99 3.49
655 656 0.389948 CAGTTCCGTCCAGGTAGCAC 60.390 60.000 0.00 0.00 41.99 4.40
656 657 0.830444 AGTTCCGTCCAGGTAGCACA 60.830 55.000 0.00 0.00 41.99 4.57
657 658 0.249398 GTTCCGTCCAGGTAGCACAT 59.751 55.000 0.00 0.00 41.99 3.21
658 659 1.479323 GTTCCGTCCAGGTAGCACATA 59.521 52.381 0.00 0.00 41.99 2.29
659 660 1.108776 TCCGTCCAGGTAGCACATAC 58.891 55.000 0.00 0.00 41.99 2.39
673 674 7.710766 GTAGCACATACCTAATACCTTTCAC 57.289 40.000 0.00 0.00 0.00 3.18
674 675 5.681639 AGCACATACCTAATACCTTTCACC 58.318 41.667 0.00 0.00 0.00 4.02
675 676 4.820173 GCACATACCTAATACCTTTCACCC 59.180 45.833 0.00 0.00 0.00 4.61
676 677 5.374071 CACATACCTAATACCTTTCACCCC 58.626 45.833 0.00 0.00 0.00 4.95
677 678 4.414514 ACATACCTAATACCTTTCACCCCC 59.585 45.833 0.00 0.00 0.00 5.40
678 679 3.231699 ACCTAATACCTTTCACCCCCT 57.768 47.619 0.00 0.00 0.00 4.79
679 680 3.548967 ACCTAATACCTTTCACCCCCTT 58.451 45.455 0.00 0.00 0.00 3.95
680 681 4.713283 ACCTAATACCTTTCACCCCCTTA 58.287 43.478 0.00 0.00 0.00 2.69
681 682 5.302818 ACCTAATACCTTTCACCCCCTTAT 58.697 41.667 0.00 0.00 0.00 1.73
682 683 5.371769 ACCTAATACCTTTCACCCCCTTATC 59.628 44.000 0.00 0.00 0.00 1.75
683 684 5.611408 CCTAATACCTTTCACCCCCTTATCT 59.389 44.000 0.00 0.00 0.00 1.98
684 685 6.790963 CCTAATACCTTTCACCCCCTTATCTA 59.209 42.308 0.00 0.00 0.00 1.98
738 739 3.482436 AGTTCGGTACTGATGCCAAAAA 58.518 40.909 4.94 0.00 35.19 1.94
743 744 1.135402 GTACTGATGCCAAAAAGCGGG 60.135 52.381 0.00 0.00 34.65 6.13
744 745 0.827507 ACTGATGCCAAAAAGCGGGT 60.828 50.000 0.00 0.00 34.65 5.28
750 751 2.984871 CCAAAAAGCGGGTTTGTGG 58.015 52.632 23.28 23.28 45.44 4.17
769 770 8.821894 GTTTGTGGTTTTGTTATAATGCTCAAA 58.178 29.630 0.00 0.00 0.00 2.69
778 779 6.686630 TGTTATAATGCTCAAAACCACAAGG 58.313 36.000 0.00 0.00 42.21 3.61
796 797 4.742201 CTCCTGTCGTGCCCACCG 62.742 72.222 0.00 0.00 0.00 4.94
816 817 1.066303 GTCTCTCGCGAACTGGATCAT 59.934 52.381 11.33 0.00 0.00 2.45
828 829 2.263741 GGATCATCCATGCCGTGCC 61.264 63.158 0.00 0.00 36.28 5.01
879 880 4.710695 CGTACACGTCGCCAGCCA 62.711 66.667 0.00 0.00 34.11 4.75
880 881 2.809601 GTACACGTCGCCAGCCAG 60.810 66.667 0.00 0.00 0.00 4.85
881 882 4.063967 TACACGTCGCCAGCCAGG 62.064 66.667 0.00 0.00 41.84 4.45
937 955 0.866427 CTTAGATCCATGCAGCAGCG 59.134 55.000 0.00 0.00 46.23 5.18
961 1023 6.224584 GGAACTGCTGAAGAATATAGTACCC 58.775 44.000 0.00 0.00 0.00 3.69
962 1024 6.042208 GGAACTGCTGAAGAATATAGTACCCT 59.958 42.308 0.00 0.00 0.00 4.34
963 1025 7.232941 GGAACTGCTGAAGAATATAGTACCCTA 59.767 40.741 0.00 0.00 0.00 3.53
964 1026 7.527568 ACTGCTGAAGAATATAGTACCCTAC 57.472 40.000 0.00 0.00 0.00 3.18
965 1027 6.494146 ACTGCTGAAGAATATAGTACCCTACC 59.506 42.308 0.00 0.00 0.00 3.18
966 1028 5.475909 TGCTGAAGAATATAGTACCCTACCG 59.524 44.000 0.00 0.00 0.00 4.02
988 1050 3.996124 ACCTTGCTCGCTCGCACT 61.996 61.111 0.00 0.00 40.09 4.40
993 1055 3.177920 GCTCGCTCGCACTCACTG 61.178 66.667 0.00 0.00 0.00 3.66
994 1056 2.256764 CTCGCTCGCACTCACTGT 59.743 61.111 0.00 0.00 0.00 3.55
996 1058 2.193865 CTCGCTCGCACTCACTGTCT 62.194 60.000 0.00 0.00 0.00 3.41
998 1060 1.287191 GCTCGCACTCACTGTCTCA 59.713 57.895 0.00 0.00 0.00 3.27
999 1061 1.006314 GCTCGCACTCACTGTCTCAC 61.006 60.000 0.00 0.00 0.00 3.51
1000 1062 0.312102 CTCGCACTCACTGTCTCACA 59.688 55.000 0.00 0.00 0.00 3.58
1001 1063 0.030773 TCGCACTCACTGTCTCACAC 59.969 55.000 0.00 0.00 0.00 3.82
1003 1065 1.536922 CGCACTCACTGTCTCACACTT 60.537 52.381 0.00 0.00 0.00 3.16
1004 1066 2.131183 GCACTCACTGTCTCACACTTC 58.869 52.381 0.00 0.00 0.00 3.01
1036 1098 3.838271 CTAGCCTCGCCCTCGCAA 61.838 66.667 0.00 0.00 35.26 4.85
1052 1118 1.915614 GCAAGATGTGGAGCGGTGTG 61.916 60.000 0.00 0.00 0.00 3.82
1499 1574 5.371526 ACAGGATCGATTGATGCATAGTTT 58.628 37.500 16.07 0.00 44.70 2.66
1500 1575 6.524734 ACAGGATCGATTGATGCATAGTTTA 58.475 36.000 16.07 0.00 44.70 2.01
1501 1576 6.648310 ACAGGATCGATTGATGCATAGTTTAG 59.352 38.462 16.07 0.00 44.70 1.85
1502 1577 5.641209 AGGATCGATTGATGCATAGTTTAGC 59.359 40.000 16.07 0.00 44.70 3.09
1503 1578 5.163814 GGATCGATTGATGCATAGTTTAGCC 60.164 44.000 9.47 0.00 42.10 3.93
1612 1688 4.164988 AGATCAAGGTGGATTGTCCCTTAG 59.835 45.833 0.00 0.00 36.45 2.18
1665 1751 3.077359 GAGCTAGCCATCTCTCTCTCTC 58.923 54.545 12.13 0.00 0.00 3.20
1666 1752 2.713167 AGCTAGCCATCTCTCTCTCTCT 59.287 50.000 12.13 0.00 0.00 3.10
1667 1753 3.077359 GCTAGCCATCTCTCTCTCTCTC 58.923 54.545 2.29 0.00 0.00 3.20
1668 1754 3.244700 GCTAGCCATCTCTCTCTCTCTCT 60.245 52.174 2.29 0.00 0.00 3.10
1669 1755 3.498774 AGCCATCTCTCTCTCTCTCTC 57.501 52.381 0.00 0.00 0.00 3.20
1670 1756 3.051581 AGCCATCTCTCTCTCTCTCTCT 58.948 50.000 0.00 0.00 0.00 3.10
1671 1757 3.461085 AGCCATCTCTCTCTCTCTCTCTT 59.539 47.826 0.00 0.00 0.00 2.85
1672 1758 4.660303 AGCCATCTCTCTCTCTCTCTCTTA 59.340 45.833 0.00 0.00 0.00 2.10
1715 1804 9.702494 AATCTGTACTTTGTAGTGGTACTTTAC 57.298 33.333 0.00 0.00 37.35 2.01
1727 1816 9.480053 GTAGTGGTACTTTACTTAACAACATGA 57.520 33.333 0.00 0.00 0.00 3.07
1859 1950 3.059884 TCACACGCAAGATCTCTTCAAC 58.940 45.455 0.00 0.00 43.62 3.18
1891 1987 7.770433 TCTGATTTGATCACAACCGATAAGATT 59.230 33.333 0.00 0.00 35.63 2.40
1948 2044 1.538512 TGCTGAGCACTGCTGATTTTC 59.461 47.619 8.69 0.00 39.88 2.29
2082 2180 7.500892 TGTCTAGGATGATCAGAAGTAGAGAAC 59.499 40.741 0.09 0.00 0.00 3.01
2149 2250 6.930731 TGCCTTAAAACACTGGGAAATAATC 58.069 36.000 0.00 0.00 0.00 1.75
2203 2304 4.706962 AGATGTTCTTTCAATTGGTAGCCC 59.293 41.667 5.42 0.00 0.00 5.19
2231 2332 6.179040 CCTCTCTTCTGAAACCATCTCAAAT 58.821 40.000 0.00 0.00 0.00 2.32
2241 2342 8.463930 TGAAACCATCTCAAATTTAACTGACT 57.536 30.769 0.00 0.00 0.00 3.41
2284 2394 8.607562 AGGAAACTTAACTGAATTTCAGCTGCT 61.608 37.037 23.22 0.00 43.41 4.24
2294 2404 7.686438 TGAATTTCAGCTGCTAATAAACTCA 57.314 32.000 9.47 6.85 0.00 3.41
2295 2405 7.755591 TGAATTTCAGCTGCTAATAAACTCAG 58.244 34.615 9.47 0.00 0.00 3.35
2296 2406 7.391554 TGAATTTCAGCTGCTAATAAACTCAGT 59.608 33.333 9.47 0.00 0.00 3.41
2297 2407 6.727824 TTTCAGCTGCTAATAAACTCAGTC 57.272 37.500 9.47 0.00 0.00 3.51
2298 2408 5.405935 TCAGCTGCTAATAAACTCAGTCA 57.594 39.130 9.47 0.00 0.00 3.41
2307 2417 8.749354 TGCTAATAAACTCAGTCATCTGTTCTA 58.251 33.333 0.00 0.00 41.91 2.10
2327 2437 2.018727 CTGCAGTTGCCAAGCCAACA 62.019 55.000 5.25 0.00 45.73 3.33
2339 2449 3.741476 CCAACAGCAAGCGGAGGC 61.741 66.667 0.00 0.00 40.37 4.70
2417 2527 1.488393 TGGTGGATGATCATGGCGTAA 59.512 47.619 14.30 0.00 0.00 3.18
2423 2533 5.700832 GTGGATGATCATGGCGTAATAAGAA 59.299 40.000 14.30 0.00 0.00 2.52
2429 2539 6.367695 TGATCATGGCGTAATAAGAAATACCG 59.632 38.462 0.00 0.00 0.00 4.02
2449 2559 5.050490 ACCGATGAGTATGAACTGTTATGC 58.950 41.667 0.00 0.00 35.56 3.14
2492 2606 9.806203 CAATAAACATAACCATCATGTTGTCAT 57.194 29.630 3.19 0.00 43.94 3.06
2500 2614 6.159299 ACCATCATGTTGTCATTTTGTTCA 57.841 33.333 3.19 0.00 31.15 3.18
2502 2616 5.119588 CCATCATGTTGTCATTTTGTTCAGC 59.880 40.000 3.19 0.00 31.15 4.26
2504 2618 5.283294 TCATGTTGTCATTTTGTTCAGCAG 58.717 37.500 0.00 0.00 31.15 4.24
2510 2624 7.333921 TGTTGTCATTTTGTTCAGCAGATTTTT 59.666 29.630 0.00 0.00 0.00 1.94
2533 2647 0.615331 CCTGTGGCTCTGTACATGGT 59.385 55.000 0.00 0.00 0.00 3.55
2538 2652 2.496070 GTGGCTCTGTACATGGTCTACA 59.504 50.000 0.00 0.00 0.00 2.74
2539 2653 2.760650 TGGCTCTGTACATGGTCTACAG 59.239 50.000 13.28 13.28 41.71 2.74
2546 2660 4.556697 TGTACATGGTCTACAGATCCCAT 58.443 43.478 0.00 0.00 38.20 4.00
2572 2686 7.286215 TCTGTATGCCTATCTAGGTTACAAC 57.714 40.000 15.73 6.26 45.42 3.32
2576 2690 5.339008 TGCCTATCTAGGTTACAACTGTG 57.661 43.478 5.21 0.00 45.42 3.66
2577 2691 4.161565 TGCCTATCTAGGTTACAACTGTGG 59.838 45.833 5.21 0.00 45.42 4.17
2589 2703 7.558444 AGGTTACAACTGTGGTTAAATGAGAAA 59.442 33.333 0.00 0.00 33.88 2.52
2594 2708 7.556275 ACAACTGTGGTTAAATGAGAAAGAAGA 59.444 33.333 0.00 0.00 33.88 2.87
2595 2709 8.405531 CAACTGTGGTTAAATGAGAAAGAAGAA 58.594 33.333 0.00 0.00 33.88 2.52
2610 2726 9.995957 GAGAAAGAAGAATATTGTTTAGAAGGC 57.004 33.333 0.00 0.00 0.00 4.35
2616 2732 9.336171 GAAGAATATTGTTTAGAAGGCAGAGAT 57.664 33.333 0.00 0.00 0.00 2.75
2644 2760 3.988379 TGAACACCAAAACTGAGCATC 57.012 42.857 0.00 0.00 0.00 3.91
2692 2808 7.405469 TTGCAAACACATAACTAATGCAAAG 57.595 32.000 7.71 0.00 45.86 2.77
2712 2828 4.048970 AGCACCAAGTAGAAGTCTAGGA 57.951 45.455 0.00 0.00 0.00 2.94
2717 2833 4.527427 ACCAAGTAGAAGTCTAGGACCAAC 59.473 45.833 0.00 0.00 32.18 3.77
2733 2849 4.022849 GGACCAACAACCAATGAGAGAAAG 60.023 45.833 0.00 0.00 0.00 2.62
2745 2861 7.115414 CCAATGAGAGAAAGGACCTTCTATTT 58.885 38.462 7.34 0.00 35.76 1.40
2786 2906 7.821652 TGTTTTGATACAACAGTTTCAACAGA 58.178 30.769 0.00 0.00 34.46 3.41
2798 2918 8.225603 ACAGTTTCAACAGATCACAAATTAGT 57.774 30.769 0.00 0.00 0.00 2.24
2824 2944 0.666374 GGGTGAACCTTTTGTCCACG 59.334 55.000 0.00 0.00 35.85 4.94
2858 2978 3.398318 TCAGCCATCACTCCCTACTTA 57.602 47.619 0.00 0.00 0.00 2.24
2876 2996 4.309099 ACTTACGGCTTTTATGTTCACGA 58.691 39.130 0.00 0.00 0.00 4.35
2915 3035 2.165437 CCTGTTCTCCTCCTTTCTCTCG 59.835 54.545 0.00 0.00 0.00 4.04
2945 3065 8.165239 TGCTGCTATTGTTCTTTTCTTCTTTA 57.835 30.769 0.00 0.00 0.00 1.85
3017 3137 4.335416 TCAAAAATAGTGGCTTCTCTGGG 58.665 43.478 0.00 0.00 0.00 4.45
3027 3147 2.621668 GGCTTCTCTGGGCCATAAACTT 60.622 50.000 6.72 0.00 46.84 2.66
3067 3187 1.112113 ACTCGTGCATCCGGACTTAT 58.888 50.000 6.12 0.00 0.00 1.73
3165 3285 1.399727 CGCGCTTCACCCTAACAAAAG 60.400 52.381 5.56 0.00 0.00 2.27
3177 3297 7.339721 TCACCCTAACAAAAGAATTGTGTGTTA 59.660 33.333 10.11 10.11 32.72 2.41
3178 3298 7.647715 CACCCTAACAAAAGAATTGTGTGTTAG 59.352 37.037 21.24 21.24 42.42 2.34
3179 3299 6.640907 CCCTAACAAAAGAATTGTGTGTTAGC 59.359 38.462 22.06 0.00 41.96 3.09
3180 3300 7.425606 CCTAACAAAAGAATTGTGTGTTAGCT 58.574 34.615 22.06 0.00 41.96 3.32
3181 3301 7.379529 CCTAACAAAAGAATTGTGTGTTAGCTG 59.620 37.037 22.06 12.88 41.96 4.24
3182 3302 6.207691 ACAAAAGAATTGTGTGTTAGCTGT 57.792 33.333 0.00 0.00 0.00 4.40
3183 3303 6.630071 ACAAAAGAATTGTGTGTTAGCTGTT 58.370 32.000 0.00 0.00 0.00 3.16
3184 3304 7.767261 ACAAAAGAATTGTGTGTTAGCTGTTA 58.233 30.769 0.00 0.00 0.00 2.41
3193 3313 6.548171 TGTGTGTTAGCTGTTAAGTGAAAAC 58.452 36.000 0.00 0.00 0.00 2.43
3244 3365 7.735917 AGCAGATACAAATGTATAGGCTAACA 58.264 34.615 20.81 5.22 43.02 2.41
3350 3473 6.173339 AGACCACATCTTCAATTAATGTCGT 58.827 36.000 0.00 0.00 31.62 4.34
3452 3584 2.448542 GCCTAGCCCATCCTCCCA 60.449 66.667 0.00 0.00 0.00 4.37
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.247861 ACTTAGTCATCCTATTCAAAATTTGCT 57.752 29.630 0.00 0.00 0.00 3.91
2 3 9.508567 GACTTAGTCATCCTATTCAAAATTTGC 57.491 33.333 7.59 0.00 32.09 3.68
10 11 9.658799 CTTTTTCAGACTTAGTCATCCTATTCA 57.341 33.333 15.23 0.00 34.60 2.57
11 12 9.877178 TCTTTTTCAGACTTAGTCATCCTATTC 57.123 33.333 15.23 0.00 34.60 1.75
13 14 9.660180 GTTCTTTTTCAGACTTAGTCATCCTAT 57.340 33.333 15.23 0.00 34.60 2.57
14 15 8.871125 AGTTCTTTTTCAGACTTAGTCATCCTA 58.129 33.333 15.23 0.00 34.60 2.94
15 16 7.659390 CAGTTCTTTTTCAGACTTAGTCATCCT 59.341 37.037 15.23 0.00 34.60 3.24
16 17 7.442666 ACAGTTCTTTTTCAGACTTAGTCATCC 59.557 37.037 15.23 0.00 34.60 3.51
17 18 8.371770 ACAGTTCTTTTTCAGACTTAGTCATC 57.628 34.615 15.23 0.00 34.60 2.92
18 19 9.482627 CTACAGTTCTTTTTCAGACTTAGTCAT 57.517 33.333 15.23 0.00 34.60 3.06
19 20 8.692710 TCTACAGTTCTTTTTCAGACTTAGTCA 58.307 33.333 15.23 0.00 34.60 3.41
20 21 9.530633 TTCTACAGTTCTTTTTCAGACTTAGTC 57.469 33.333 3.85 3.85 0.00 2.59
24 25 8.964476 TGATTCTACAGTTCTTTTTCAGACTT 57.036 30.769 0.00 0.00 0.00 3.01
25 26 8.997323 CATGATTCTACAGTTCTTTTTCAGACT 58.003 33.333 0.00 0.00 0.00 3.24
26 27 8.993121 TCATGATTCTACAGTTCTTTTTCAGAC 58.007 33.333 0.00 0.00 0.00 3.51
27 28 9.730705 ATCATGATTCTACAGTTCTTTTTCAGA 57.269 29.630 1.18 0.00 0.00 3.27
28 29 9.985318 GATCATGATTCTACAGTTCTTTTTCAG 57.015 33.333 10.14 0.00 0.00 3.02
29 30 9.506018 TGATCATGATTCTACAGTTCTTTTTCA 57.494 29.630 10.14 0.00 0.00 2.69
32 33 9.512588 ACTTGATCATGATTCTACAGTTCTTTT 57.487 29.630 10.14 0.00 0.00 2.27
33 34 9.160496 GACTTGATCATGATTCTACAGTTCTTT 57.840 33.333 10.14 0.00 0.00 2.52
34 35 8.538701 AGACTTGATCATGATTCTACAGTTCTT 58.461 33.333 10.14 0.00 0.00 2.52
35 36 8.076910 AGACTTGATCATGATTCTACAGTTCT 57.923 34.615 10.14 5.86 0.00 3.01
36 37 9.809096 TTAGACTTGATCATGATTCTACAGTTC 57.191 33.333 10.14 3.85 0.00 3.01
62 63 3.012518 CTGACCATCCGATGCTCTTTTT 58.987 45.455 2.53 0.00 0.00 1.94
63 64 2.026822 ACTGACCATCCGATGCTCTTTT 60.027 45.455 2.53 0.00 0.00 2.27
64 65 1.556911 ACTGACCATCCGATGCTCTTT 59.443 47.619 2.53 0.00 0.00 2.52
65 66 1.198713 ACTGACCATCCGATGCTCTT 58.801 50.000 2.53 0.00 0.00 2.85
66 67 1.683917 GTACTGACCATCCGATGCTCT 59.316 52.381 2.53 0.00 0.00 4.09
67 68 1.683917 AGTACTGACCATCCGATGCTC 59.316 52.381 2.53 0.00 0.00 4.26
68 69 1.683917 GAGTACTGACCATCCGATGCT 59.316 52.381 0.00 0.00 0.00 3.79
69 70 1.409064 TGAGTACTGACCATCCGATGC 59.591 52.381 0.00 0.00 0.00 3.91
70 71 2.952310 TCTGAGTACTGACCATCCGATG 59.048 50.000 0.00 0.93 0.00 3.84
71 72 3.298686 TCTGAGTACTGACCATCCGAT 57.701 47.619 0.00 0.00 0.00 4.18
72 73 2.801077 TCTGAGTACTGACCATCCGA 57.199 50.000 0.00 0.00 0.00 4.55
73 74 4.762251 TCATATCTGAGTACTGACCATCCG 59.238 45.833 0.00 0.00 0.00 4.18
74 75 6.656632 TTCATATCTGAGTACTGACCATCC 57.343 41.667 0.00 0.00 31.68 3.51
75 76 7.973388 GCTATTCATATCTGAGTACTGACCATC 59.027 40.741 0.00 0.00 31.68 3.51
76 77 7.093552 GGCTATTCATATCTGAGTACTGACCAT 60.094 40.741 0.00 0.00 31.68 3.55
77 78 6.209589 GGCTATTCATATCTGAGTACTGACCA 59.790 42.308 0.00 0.00 31.68 4.02
78 79 6.209589 TGGCTATTCATATCTGAGTACTGACC 59.790 42.308 0.00 0.00 31.68 4.02
79 80 7.087639 GTGGCTATTCATATCTGAGTACTGAC 58.912 42.308 0.00 0.00 31.68 3.51
80 81 6.777580 TGTGGCTATTCATATCTGAGTACTGA 59.222 38.462 0.00 0.00 31.68 3.41
81 82 6.986250 TGTGGCTATTCATATCTGAGTACTG 58.014 40.000 0.00 0.00 31.68 2.74
82 83 7.452813 TGATGTGGCTATTCATATCTGAGTACT 59.547 37.037 0.00 0.00 36.59 2.73
83 84 7.606349 TGATGTGGCTATTCATATCTGAGTAC 58.394 38.462 0.00 0.00 36.59 2.73
84 85 7.781324 TGATGTGGCTATTCATATCTGAGTA 57.219 36.000 0.00 0.00 36.59 2.59
85 86 6.676990 TGATGTGGCTATTCATATCTGAGT 57.323 37.500 0.00 0.00 36.59 3.41
86 87 7.328737 TCATGATGTGGCTATTCATATCTGAG 58.671 38.462 0.00 0.00 36.59 3.35
87 88 7.248743 TCATGATGTGGCTATTCATATCTGA 57.751 36.000 0.00 0.00 36.59 3.27
88 89 7.916914 TTCATGATGTGGCTATTCATATCTG 57.083 36.000 0.00 0.00 36.59 2.90
93 94 9.139734 AGTTTATTTCATGATGTGGCTATTCAT 57.860 29.630 0.00 0.00 0.00 2.57
94 95 8.523915 AGTTTATTTCATGATGTGGCTATTCA 57.476 30.769 0.00 0.00 0.00 2.57
95 96 8.623903 TGAGTTTATTTCATGATGTGGCTATTC 58.376 33.333 0.00 0.00 0.00 1.75
96 97 8.408601 GTGAGTTTATTTCATGATGTGGCTATT 58.591 33.333 0.00 0.00 0.00 1.73
97 98 7.557358 TGTGAGTTTATTTCATGATGTGGCTAT 59.443 33.333 0.00 0.00 0.00 2.97
98 99 6.883756 TGTGAGTTTATTTCATGATGTGGCTA 59.116 34.615 0.00 0.00 0.00 3.93
99 100 5.711506 TGTGAGTTTATTTCATGATGTGGCT 59.288 36.000 0.00 0.00 0.00 4.75
100 101 5.953183 TGTGAGTTTATTTCATGATGTGGC 58.047 37.500 0.00 0.00 0.00 5.01
101 102 9.726232 CTATTGTGAGTTTATTTCATGATGTGG 57.274 33.333 0.00 0.00 0.00 4.17
102 103 9.229784 GCTATTGTGAGTTTATTTCATGATGTG 57.770 33.333 0.00 0.00 0.00 3.21
103 104 9.182214 AGCTATTGTGAGTTTATTTCATGATGT 57.818 29.630 0.00 0.00 0.00 3.06
107 108 9.722056 GGTAAGCTATTGTGAGTTTATTTCATG 57.278 33.333 0.00 0.00 0.00 3.07
108 109 9.461312 TGGTAAGCTATTGTGAGTTTATTTCAT 57.539 29.630 0.00 0.00 0.00 2.57
109 110 8.726988 GTGGTAAGCTATTGTGAGTTTATTTCA 58.273 33.333 0.00 0.00 0.00 2.69
110 111 8.947115 AGTGGTAAGCTATTGTGAGTTTATTTC 58.053 33.333 0.00 0.00 0.00 2.17
111 112 8.730680 CAGTGGTAAGCTATTGTGAGTTTATTT 58.269 33.333 0.00 0.00 0.00 1.40
112 113 7.336931 CCAGTGGTAAGCTATTGTGAGTTTATT 59.663 37.037 0.00 0.00 0.00 1.40
113 114 6.823689 CCAGTGGTAAGCTATTGTGAGTTTAT 59.176 38.462 0.00 0.00 0.00 1.40
114 115 6.014070 TCCAGTGGTAAGCTATTGTGAGTTTA 60.014 38.462 9.54 0.00 0.00 2.01
115 116 5.003804 CCAGTGGTAAGCTATTGTGAGTTT 58.996 41.667 0.00 0.00 0.00 2.66
116 117 4.286032 TCCAGTGGTAAGCTATTGTGAGTT 59.714 41.667 9.54 0.00 0.00 3.01
117 118 3.838317 TCCAGTGGTAAGCTATTGTGAGT 59.162 43.478 9.54 0.00 0.00 3.41
118 119 4.471904 TCCAGTGGTAAGCTATTGTGAG 57.528 45.455 9.54 0.00 0.00 3.51
119 120 4.041075 TGTTCCAGTGGTAAGCTATTGTGA 59.959 41.667 9.54 0.00 0.00 3.58
120 121 4.323417 TGTTCCAGTGGTAAGCTATTGTG 58.677 43.478 9.54 0.00 0.00 3.33
121 122 4.634012 TGTTCCAGTGGTAAGCTATTGT 57.366 40.909 9.54 0.00 0.00 2.71
122 123 4.142600 GCTTGTTCCAGTGGTAAGCTATTG 60.143 45.833 26.57 8.26 40.29 1.90
123 124 4.010349 GCTTGTTCCAGTGGTAAGCTATT 58.990 43.478 26.57 0.00 40.29 1.73
124 125 3.009033 TGCTTGTTCCAGTGGTAAGCTAT 59.991 43.478 30.06 0.00 43.00 2.97
125 126 2.370519 TGCTTGTTCCAGTGGTAAGCTA 59.629 45.455 30.06 21.01 43.00 3.32
126 127 1.142870 TGCTTGTTCCAGTGGTAAGCT 59.857 47.619 30.06 0.00 43.00 3.74
127 128 1.604604 TGCTTGTTCCAGTGGTAAGC 58.395 50.000 26.86 26.86 42.92 3.09
128 129 3.380004 TGTTTGCTTGTTCCAGTGGTAAG 59.620 43.478 9.54 13.00 0.00 2.34
129 130 3.357203 TGTTTGCTTGTTCCAGTGGTAA 58.643 40.909 9.54 2.77 0.00 2.85
130 131 3.006112 TGTTTGCTTGTTCCAGTGGTA 57.994 42.857 9.54 0.00 0.00 3.25
131 132 1.846007 TGTTTGCTTGTTCCAGTGGT 58.154 45.000 9.54 0.00 0.00 4.16
132 133 3.125316 CAATGTTTGCTTGTTCCAGTGG 58.875 45.455 1.40 1.40 0.00 4.00
133 134 3.784338 ACAATGTTTGCTTGTTCCAGTG 58.216 40.909 0.00 0.00 33.10 3.66
134 135 3.181476 GGACAATGTTTGCTTGTTCCAGT 60.181 43.478 0.00 0.00 36.98 4.00
135 136 3.068590 AGGACAATGTTTGCTTGTTCCAG 59.931 43.478 0.00 0.00 36.98 3.86
136 137 3.030291 AGGACAATGTTTGCTTGTTCCA 58.970 40.909 0.00 0.00 36.98 3.53
137 138 3.733443 AGGACAATGTTTGCTTGTTCC 57.267 42.857 0.00 0.00 36.98 3.62
138 139 5.181690 TGTAGGACAATGTTTGCTTGTTC 57.818 39.130 0.00 0.00 36.98 3.18
139 140 5.536161 AGATGTAGGACAATGTTTGCTTGTT 59.464 36.000 0.00 0.00 36.98 2.83
140 141 5.048504 CAGATGTAGGACAATGTTTGCTTGT 60.049 40.000 0.00 0.00 39.46 3.16
141 142 5.396484 CAGATGTAGGACAATGTTTGCTTG 58.604 41.667 0.00 0.00 0.00 4.01
142 143 4.460382 CCAGATGTAGGACAATGTTTGCTT 59.540 41.667 0.00 0.00 0.00 3.91
143 144 4.012374 CCAGATGTAGGACAATGTTTGCT 58.988 43.478 0.00 0.00 0.00 3.91
144 145 4.009675 TCCAGATGTAGGACAATGTTTGC 58.990 43.478 0.00 0.00 0.00 3.68
145 146 6.573664 TTTCCAGATGTAGGACAATGTTTG 57.426 37.500 0.00 0.00 34.19 2.93
146 147 7.781324 ATTTTCCAGATGTAGGACAATGTTT 57.219 32.000 0.00 0.00 34.99 2.83
147 148 8.739972 GTTATTTTCCAGATGTAGGACAATGTT 58.260 33.333 0.00 0.00 36.50 2.71
148 149 8.109634 AGTTATTTTCCAGATGTAGGACAATGT 58.890 33.333 0.00 0.00 36.50 2.71
149 150 8.511604 AGTTATTTTCCAGATGTAGGACAATG 57.488 34.615 0.00 0.00 36.50 2.82
150 151 8.960591 CAAGTTATTTTCCAGATGTAGGACAAT 58.039 33.333 0.00 0.00 38.64 2.71
151 152 8.160765 TCAAGTTATTTTCCAGATGTAGGACAA 58.839 33.333 0.00 0.00 34.19 3.18
152 153 7.685481 TCAAGTTATTTTCCAGATGTAGGACA 58.315 34.615 0.00 0.00 34.19 4.02
153 154 8.738645 ATCAAGTTATTTTCCAGATGTAGGAC 57.261 34.615 0.00 0.00 34.19 3.85
154 155 9.753674 AAATCAAGTTATTTTCCAGATGTAGGA 57.246 29.630 0.00 0.00 0.00 2.94
188 189 5.123820 TGAAAGGCATCTATTGTAGTGCAAC 59.876 40.000 0.00 0.00 40.28 4.17
189 190 5.252547 TGAAAGGCATCTATTGTAGTGCAA 58.747 37.500 0.00 0.00 41.89 4.08
190 191 4.842574 TGAAAGGCATCTATTGTAGTGCA 58.157 39.130 0.00 0.00 35.76 4.57
191 192 4.260948 GCTGAAAGGCATCTATTGTAGTGC 60.261 45.833 0.00 0.00 34.37 4.40
192 193 5.415415 GCTGAAAGGCATCTATTGTAGTG 57.585 43.478 0.00 0.00 0.00 2.74
206 207 2.278330 GCAGGTTGGGGCTGAAAGG 61.278 63.158 0.00 0.00 0.00 3.11
207 208 2.278330 GGCAGGTTGGGGCTGAAAG 61.278 63.158 0.00 0.00 0.00 2.62
208 209 1.431195 TAGGCAGGTTGGGGCTGAAA 61.431 55.000 0.00 0.00 41.71 2.69
209 210 1.214305 ATAGGCAGGTTGGGGCTGAA 61.214 55.000 0.00 0.00 41.71 3.02
210 211 1.214305 AATAGGCAGGTTGGGGCTGA 61.214 55.000 0.00 0.00 41.71 4.26
211 212 0.550914 TAATAGGCAGGTTGGGGCTG 59.449 55.000 0.00 0.00 41.71 4.85
212 213 0.551396 GTAATAGGCAGGTTGGGGCT 59.449 55.000 0.00 0.00 44.15 5.19
213 214 0.551396 AGTAATAGGCAGGTTGGGGC 59.449 55.000 0.00 0.00 0.00 5.80
214 215 3.046374 ACTAGTAATAGGCAGGTTGGGG 58.954 50.000 1.80 0.00 0.00 4.96
215 216 4.900054 ACTACTAGTAATAGGCAGGTTGGG 59.100 45.833 3.76 0.00 0.00 4.12
216 217 5.363005 ACACTACTAGTAATAGGCAGGTTGG 59.637 44.000 3.76 0.00 0.00 3.77
217 218 6.466885 ACACTACTAGTAATAGGCAGGTTG 57.533 41.667 3.76 0.00 0.00 3.77
218 219 5.298777 CGACACTACTAGTAATAGGCAGGTT 59.701 44.000 3.76 0.00 0.00 3.50
219 220 4.820716 CGACACTACTAGTAATAGGCAGGT 59.179 45.833 3.76 0.00 0.00 4.00
220 221 5.061853 TCGACACTACTAGTAATAGGCAGG 58.938 45.833 3.76 0.00 0.00 4.85
221 222 6.615264 TTCGACACTACTAGTAATAGGCAG 57.385 41.667 3.76 1.34 0.00 4.85
222 223 7.253422 GTTTTCGACACTACTAGTAATAGGCA 58.747 38.462 3.76 0.00 0.00 4.75
223 224 7.676731 GTTTTCGACACTACTAGTAATAGGC 57.323 40.000 3.76 0.00 0.00 3.93
239 240 7.305533 GTCTCATAAGATAAGAGCGTTTTCGAC 60.306 40.741 0.00 0.00 38.62 4.20
240 241 6.691818 GTCTCATAAGATAAGAGCGTTTTCGA 59.308 38.462 0.00 0.00 38.62 3.71
241 242 6.344312 CGTCTCATAAGATAAGAGCGTTTTCG 60.344 42.308 0.00 0.00 39.04 3.46
242 243 6.074782 CCGTCTCATAAGATAAGAGCGTTTTC 60.075 42.308 0.00 0.00 33.08 2.29
243 244 5.749109 CCGTCTCATAAGATAAGAGCGTTTT 59.251 40.000 0.00 0.00 33.08 2.43
244 245 5.067413 TCCGTCTCATAAGATAAGAGCGTTT 59.933 40.000 0.00 0.00 33.08 3.60
245 246 4.579340 TCCGTCTCATAAGATAAGAGCGTT 59.421 41.667 0.00 0.00 33.08 4.84
246 247 4.135306 TCCGTCTCATAAGATAAGAGCGT 58.865 43.478 0.00 0.00 33.08 5.07
247 248 4.378978 CCTCCGTCTCATAAGATAAGAGCG 60.379 50.000 0.00 0.00 33.08 5.03
248 249 4.082463 CCCTCCGTCTCATAAGATAAGAGC 60.082 50.000 0.00 0.00 33.08 4.09
249 250 5.317808 TCCCTCCGTCTCATAAGATAAGAG 58.682 45.833 0.00 0.00 33.08 2.85
250 251 5.163077 ACTCCCTCCGTCTCATAAGATAAGA 60.163 44.000 0.00 0.00 33.08 2.10
251 252 5.074115 ACTCCCTCCGTCTCATAAGATAAG 58.926 45.833 0.00 0.00 33.08 1.73
252 253 5.063017 ACTCCCTCCGTCTCATAAGATAA 57.937 43.478 0.00 0.00 33.08 1.75
253 254 4.726035 ACTCCCTCCGTCTCATAAGATA 57.274 45.455 0.00 0.00 33.08 1.98
254 255 3.603965 ACTCCCTCCGTCTCATAAGAT 57.396 47.619 0.00 0.00 33.08 2.40
255 256 3.458857 AGTACTCCCTCCGTCTCATAAGA 59.541 47.826 0.00 0.00 0.00 2.10
256 257 3.822940 AGTACTCCCTCCGTCTCATAAG 58.177 50.000 0.00 0.00 0.00 1.73
257 258 3.947612 AGTACTCCCTCCGTCTCATAA 57.052 47.619 0.00 0.00 0.00 1.90
258 259 3.947612 AAGTACTCCCTCCGTCTCATA 57.052 47.619 0.00 0.00 0.00 2.15
259 260 2.830651 AAGTACTCCCTCCGTCTCAT 57.169 50.000 0.00 0.00 0.00 2.90
260 261 2.561419 CAAAAGTACTCCCTCCGTCTCA 59.439 50.000 0.00 0.00 0.00 3.27
261 262 2.561858 ACAAAAGTACTCCCTCCGTCTC 59.438 50.000 0.00 0.00 0.00 3.36
262 263 2.606378 ACAAAAGTACTCCCTCCGTCT 58.394 47.619 0.00 0.00 0.00 4.18
263 264 3.509184 AGTACAAAAGTACTCCCTCCGTC 59.491 47.826 0.00 0.00 35.43 4.79
264 265 3.504375 AGTACAAAAGTACTCCCTCCGT 58.496 45.455 0.00 0.00 35.43 4.69
265 266 5.184671 ACTTAGTACAAAAGTACTCCCTCCG 59.815 44.000 11.20 0.05 40.31 4.63
266 267 6.436847 AGACTTAGTACAAAAGTACTCCCTCC 59.563 42.308 11.20 0.94 40.31 4.30
267 268 7.039853 ACAGACTTAGTACAAAAGTACTCCCTC 60.040 40.741 11.20 5.38 40.31 4.30
268 269 6.781507 ACAGACTTAGTACAAAAGTACTCCCT 59.218 38.462 11.20 4.34 40.31 4.20
269 270 6.990798 ACAGACTTAGTACAAAAGTACTCCC 58.009 40.000 11.20 2.51 40.31 4.30
270 271 9.971922 TTTACAGACTTAGTACAAAAGTACTCC 57.028 33.333 11.20 2.80 40.31 3.85
308 309 9.892130 CTCCCTCTGTAAACTAATTTAAGATGT 57.108 33.333 0.00 0.00 32.04 3.06
309 310 9.892130 ACTCCCTCTGTAAACTAATTTAAGATG 57.108 33.333 0.00 0.00 32.04 2.90
314 315 9.317827 ACACTACTCCCTCTGTAAACTAATTTA 57.682 33.333 0.00 0.00 0.00 1.40
315 316 8.095169 CACACTACTCCCTCTGTAAACTAATTT 58.905 37.037 0.00 0.00 0.00 1.82
316 317 7.234988 ACACACTACTCCCTCTGTAAACTAATT 59.765 37.037 0.00 0.00 0.00 1.40
317 318 6.724905 ACACACTACTCCCTCTGTAAACTAAT 59.275 38.462 0.00 0.00 0.00 1.73
318 319 6.073314 ACACACTACTCCCTCTGTAAACTAA 58.927 40.000 0.00 0.00 0.00 2.24
319 320 5.638133 ACACACTACTCCCTCTGTAAACTA 58.362 41.667 0.00 0.00 0.00 2.24
320 321 4.481072 ACACACTACTCCCTCTGTAAACT 58.519 43.478 0.00 0.00 0.00 2.66
321 322 4.868314 ACACACTACTCCCTCTGTAAAC 57.132 45.455 0.00 0.00 0.00 2.01
322 323 5.884322 TCTACACACTACTCCCTCTGTAAA 58.116 41.667 0.00 0.00 0.00 2.01
323 324 5.509832 TCTACACACTACTCCCTCTGTAA 57.490 43.478 0.00 0.00 0.00 2.41
324 325 5.013913 AGTTCTACACACTACTCCCTCTGTA 59.986 44.000 0.00 0.00 0.00 2.74
325 326 4.080687 GTTCTACACACTACTCCCTCTGT 58.919 47.826 0.00 0.00 0.00 3.41
326 327 4.337145 AGTTCTACACACTACTCCCTCTG 58.663 47.826 0.00 0.00 0.00 3.35
327 328 4.661247 AGTTCTACACACTACTCCCTCT 57.339 45.455 0.00 0.00 0.00 3.69
328 329 4.158209 GGAAGTTCTACACACTACTCCCTC 59.842 50.000 2.25 0.00 0.00 4.30
329 330 4.087907 GGAAGTTCTACACACTACTCCCT 58.912 47.826 2.25 0.00 0.00 4.20
330 331 4.087907 AGGAAGTTCTACACACTACTCCC 58.912 47.826 2.25 0.00 0.00 4.30
331 332 6.830873 TTAGGAAGTTCTACACACTACTCC 57.169 41.667 2.25 0.00 0.00 3.85
332 333 8.305317 ACAATTAGGAAGTTCTACACACTACTC 58.695 37.037 2.25 0.00 0.00 2.59
333 334 8.191534 ACAATTAGGAAGTTCTACACACTACT 57.808 34.615 2.25 0.00 0.00 2.57
334 335 8.828688 AACAATTAGGAAGTTCTACACACTAC 57.171 34.615 2.25 0.00 0.00 2.73
336 337 7.964604 GAACAATTAGGAAGTTCTACACACT 57.035 36.000 2.25 0.00 38.79 3.55
361 362 8.547894 GCACAACGATATTACATACAGAATTGA 58.452 33.333 0.00 0.00 0.00 2.57
362 363 8.551205 AGCACAACGATATTACATACAGAATTG 58.449 33.333 0.00 0.00 0.00 2.32
363 364 8.662781 AGCACAACGATATTACATACAGAATT 57.337 30.769 0.00 0.00 0.00 2.17
364 365 8.662781 AAGCACAACGATATTACATACAGAAT 57.337 30.769 0.00 0.00 0.00 2.40
365 366 9.758651 ATAAGCACAACGATATTACATACAGAA 57.241 29.630 0.00 0.00 0.00 3.02
366 367 9.758651 AATAAGCACAACGATATTACATACAGA 57.241 29.630 0.00 0.00 0.00 3.41
367 368 9.797473 CAATAAGCACAACGATATTACATACAG 57.203 33.333 0.00 0.00 0.00 2.74
368 369 8.279800 GCAATAAGCACAACGATATTACATACA 58.720 33.333 0.00 0.00 44.79 2.29
369 370 8.641499 GCAATAAGCACAACGATATTACATAC 57.359 34.615 0.00 0.00 44.79 2.39
386 387 1.063764 GTGCAGAGCTGAGCAATAAGC 59.936 52.381 7.39 3.79 43.20 3.09
387 388 2.352034 CTGTGCAGAGCTGAGCAATAAG 59.648 50.000 7.39 6.30 43.20 1.73
388 389 2.353323 CTGTGCAGAGCTGAGCAATAA 58.647 47.619 7.39 0.89 43.20 1.40
389 390 2.010544 GCTGTGCAGAGCTGAGCAATA 61.011 52.381 27.35 3.77 43.20 1.90
390 391 1.306642 GCTGTGCAGAGCTGAGCAAT 61.307 55.000 27.35 0.00 43.20 3.56
391 392 1.964891 GCTGTGCAGAGCTGAGCAA 60.965 57.895 27.35 2.53 43.20 3.91
392 393 2.358369 GCTGTGCAGAGCTGAGCA 60.358 61.111 27.35 5.61 38.65 4.26
393 394 0.461516 TATGCTGTGCAGAGCTGAGC 60.462 55.000 32.77 11.06 43.65 4.26
394 395 2.242047 ATATGCTGTGCAGAGCTGAG 57.758 50.000 32.77 0.00 43.65 3.35
395 396 2.093341 TGAATATGCTGTGCAGAGCTGA 60.093 45.455 32.77 21.96 43.65 4.26
396 397 2.285977 TGAATATGCTGTGCAGAGCTG 58.714 47.619 32.77 6.37 43.65 4.24
397 398 2.169978 TCTGAATATGCTGTGCAGAGCT 59.830 45.455 32.77 21.41 43.65 4.09
398 399 2.558378 TCTGAATATGCTGTGCAGAGC 58.442 47.619 27.83 27.83 43.65 4.09
399 400 4.377897 TCATCTGAATATGCTGTGCAGAG 58.622 43.478 6.48 6.48 43.65 3.35
400 401 4.411256 TCATCTGAATATGCTGTGCAGA 57.589 40.909 3.02 0.00 43.65 4.26
401 402 5.690997 AATCATCTGAATATGCTGTGCAG 57.309 39.130 0.00 0.00 43.65 4.41
402 403 6.543100 TGTAAATCATCTGAATATGCTGTGCA 59.457 34.615 0.00 0.00 44.86 4.57
403 404 6.962686 TGTAAATCATCTGAATATGCTGTGC 58.037 36.000 0.00 0.00 0.00 4.57
404 405 8.151141 ACTGTAAATCATCTGAATATGCTGTG 57.849 34.615 0.00 0.00 0.00 3.66
405 406 9.836864 TTACTGTAAATCATCTGAATATGCTGT 57.163 29.630 0.00 0.00 0.00 4.40
412 413 9.507329 AGTGTGTTTACTGTAAATCATCTGAAT 57.493 29.630 15.36 1.24 0.00 2.57
413 414 8.773645 CAGTGTGTTTACTGTAAATCATCTGAA 58.226 33.333 15.36 0.00 42.38 3.02
414 415 8.310406 CAGTGTGTTTACTGTAAATCATCTGA 57.690 34.615 15.36 0.00 42.38 3.27
427 428 6.654582 TCATGCATTATCACAGTGTGTTTACT 59.345 34.615 22.29 7.83 34.79 2.24
428 429 6.841119 TCATGCATTATCACAGTGTGTTTAC 58.159 36.000 22.29 9.40 34.79 2.01
429 430 7.628769 ATCATGCATTATCACAGTGTGTTTA 57.371 32.000 22.29 12.74 34.79 2.01
430 431 5.963176 TCATGCATTATCACAGTGTGTTT 57.037 34.783 22.29 13.68 34.79 2.83
431 432 6.825213 ACTATCATGCATTATCACAGTGTGTT 59.175 34.615 22.29 16.67 34.79 3.32
432 433 6.351711 ACTATCATGCATTATCACAGTGTGT 58.648 36.000 22.29 12.43 34.79 3.72
433 434 6.856135 ACTATCATGCATTATCACAGTGTG 57.144 37.500 17.53 17.53 34.45 3.82
444 445 8.939929 CCGACAAGAATATTACTATCATGCATT 58.060 33.333 0.00 0.00 0.00 3.56
445 446 8.097038 ACCGACAAGAATATTACTATCATGCAT 58.903 33.333 0.00 0.00 0.00 3.96
446 447 7.441836 ACCGACAAGAATATTACTATCATGCA 58.558 34.615 0.00 0.00 0.00 3.96
447 448 7.598869 TGACCGACAAGAATATTACTATCATGC 59.401 37.037 0.00 0.00 0.00 4.06
448 449 9.645059 ATGACCGACAAGAATATTACTATCATG 57.355 33.333 0.00 0.00 0.00 3.07
450 451 9.692749 GAATGACCGACAAGAATATTACTATCA 57.307 33.333 0.00 0.00 0.00 2.15
451 452 9.915629 AGAATGACCGACAAGAATATTACTATC 57.084 33.333 0.00 0.00 0.00 2.08
454 455 9.751542 CTTAGAATGACCGACAAGAATATTACT 57.248 33.333 0.00 0.00 0.00 2.24
455 456 8.488764 GCTTAGAATGACCGACAAGAATATTAC 58.511 37.037 0.00 0.00 0.00 1.89
456 457 7.656137 GGCTTAGAATGACCGACAAGAATATTA 59.344 37.037 0.00 0.00 0.00 0.98
457 458 6.483640 GGCTTAGAATGACCGACAAGAATATT 59.516 38.462 0.00 0.00 0.00 1.28
458 459 5.992217 GGCTTAGAATGACCGACAAGAATAT 59.008 40.000 0.00 0.00 0.00 1.28
459 460 5.357257 GGCTTAGAATGACCGACAAGAATA 58.643 41.667 0.00 0.00 0.00 1.75
460 461 4.192317 GGCTTAGAATGACCGACAAGAAT 58.808 43.478 0.00 0.00 0.00 2.40
461 462 3.596214 GGCTTAGAATGACCGACAAGAA 58.404 45.455 0.00 0.00 0.00 2.52
462 463 2.093658 GGGCTTAGAATGACCGACAAGA 60.094 50.000 0.00 0.00 0.00 3.02
463 464 2.280628 GGGCTTAGAATGACCGACAAG 58.719 52.381 0.00 0.00 0.00 3.16
464 465 1.626321 TGGGCTTAGAATGACCGACAA 59.374 47.619 0.00 0.00 34.69 3.18
465 466 1.066430 GTGGGCTTAGAATGACCGACA 60.066 52.381 0.00 0.00 34.69 4.35
466 467 1.066430 TGTGGGCTTAGAATGACCGAC 60.066 52.381 0.00 0.00 34.69 4.79
467 468 1.207089 CTGTGGGCTTAGAATGACCGA 59.793 52.381 0.00 0.00 34.69 4.69
468 469 1.656652 CTGTGGGCTTAGAATGACCG 58.343 55.000 0.00 0.00 34.69 4.79
469 470 2.044123 CCTGTGGGCTTAGAATGACC 57.956 55.000 0.00 0.00 0.00 4.02
481 482 5.557866 GTTTATAGGTTATAGGCCTGTGGG 58.442 45.833 17.99 0.00 37.54 4.61
482 483 5.011329 TCGTTTATAGGTTATAGGCCTGTGG 59.989 44.000 17.99 0.00 37.54 4.17
483 484 6.092955 TCGTTTATAGGTTATAGGCCTGTG 57.907 41.667 17.99 0.00 37.54 3.66
484 485 6.463472 GGTTCGTTTATAGGTTATAGGCCTGT 60.463 42.308 17.99 12.48 37.54 4.00
485 486 5.930569 GGTTCGTTTATAGGTTATAGGCCTG 59.069 44.000 17.99 0.00 37.54 4.85
486 487 5.012458 GGGTTCGTTTATAGGTTATAGGCCT 59.988 44.000 11.78 11.78 40.00 5.19
487 488 5.221702 TGGGTTCGTTTATAGGTTATAGGCC 60.222 44.000 0.00 0.00 0.00 5.19
488 489 5.857268 TGGGTTCGTTTATAGGTTATAGGC 58.143 41.667 0.00 0.00 0.00 3.93
489 490 5.930569 GCTGGGTTCGTTTATAGGTTATAGG 59.069 44.000 0.00 0.00 0.00 2.57
490 491 6.518493 TGCTGGGTTCGTTTATAGGTTATAG 58.482 40.000 0.00 0.00 0.00 1.31
491 492 6.482898 TGCTGGGTTCGTTTATAGGTTATA 57.517 37.500 0.00 0.00 0.00 0.98
492 493 5.362105 TGCTGGGTTCGTTTATAGGTTAT 57.638 39.130 0.00 0.00 0.00 1.89
493 494 4.822685 TGCTGGGTTCGTTTATAGGTTA 57.177 40.909 0.00 0.00 0.00 2.85
494 495 3.706600 TGCTGGGTTCGTTTATAGGTT 57.293 42.857 0.00 0.00 0.00 3.50
495 496 3.706600 TTGCTGGGTTCGTTTATAGGT 57.293 42.857 0.00 0.00 0.00 3.08
496 497 4.196193 TCATTGCTGGGTTCGTTTATAGG 58.804 43.478 0.00 0.00 0.00 2.57
497 498 5.584649 TCTTCATTGCTGGGTTCGTTTATAG 59.415 40.000 0.00 0.00 0.00 1.31
498 499 5.353123 GTCTTCATTGCTGGGTTCGTTTATA 59.647 40.000 0.00 0.00 0.00 0.98
499 500 4.156008 GTCTTCATTGCTGGGTTCGTTTAT 59.844 41.667 0.00 0.00 0.00 1.40
500 501 3.500680 GTCTTCATTGCTGGGTTCGTTTA 59.499 43.478 0.00 0.00 0.00 2.01
501 502 2.293399 GTCTTCATTGCTGGGTTCGTTT 59.707 45.455 0.00 0.00 0.00 3.60
502 503 1.880027 GTCTTCATTGCTGGGTTCGTT 59.120 47.619 0.00 0.00 0.00 3.85
503 504 1.202758 TGTCTTCATTGCTGGGTTCGT 60.203 47.619 0.00 0.00 0.00 3.85
504 505 1.522668 TGTCTTCATTGCTGGGTTCG 58.477 50.000 0.00 0.00 0.00 3.95
505 506 3.149196 TCTTGTCTTCATTGCTGGGTTC 58.851 45.455 0.00 0.00 0.00 3.62
506 507 3.228188 TCTTGTCTTCATTGCTGGGTT 57.772 42.857 0.00 0.00 0.00 4.11
507 508 2.957402 TCTTGTCTTCATTGCTGGGT 57.043 45.000 0.00 0.00 0.00 4.51
508 509 4.334759 CACTATCTTGTCTTCATTGCTGGG 59.665 45.833 0.00 0.00 0.00 4.45
509 510 5.064452 GTCACTATCTTGTCTTCATTGCTGG 59.936 44.000 0.00 0.00 0.00 4.85
510 511 5.873712 AGTCACTATCTTGTCTTCATTGCTG 59.126 40.000 0.00 0.00 0.00 4.41
511 512 6.047511 AGTCACTATCTTGTCTTCATTGCT 57.952 37.500 0.00 0.00 0.00 3.91
512 513 5.871524 TGAGTCACTATCTTGTCTTCATTGC 59.128 40.000 0.00 0.00 0.00 3.56
513 514 7.763071 TCATGAGTCACTATCTTGTCTTCATTG 59.237 37.037 0.00 0.00 0.00 2.82
514 515 7.845037 TCATGAGTCACTATCTTGTCTTCATT 58.155 34.615 0.00 0.00 0.00 2.57
515 516 7.415592 TCATGAGTCACTATCTTGTCTTCAT 57.584 36.000 0.00 0.00 0.00 2.57
516 517 6.840780 TCATGAGTCACTATCTTGTCTTCA 57.159 37.500 0.00 0.00 0.00 3.02
517 518 7.487484 TGATCATGAGTCACTATCTTGTCTTC 58.513 38.462 14.49 0.00 0.00 2.87
518 519 7.123997 ACTGATCATGAGTCACTATCTTGTCTT 59.876 37.037 14.49 0.00 0.00 3.01
519 520 6.606796 ACTGATCATGAGTCACTATCTTGTCT 59.393 38.462 14.49 0.00 0.00 3.41
520 521 6.804677 ACTGATCATGAGTCACTATCTTGTC 58.195 40.000 14.49 0.00 0.00 3.18
521 522 6.183360 GGACTGATCATGAGTCACTATCTTGT 60.183 42.308 6.59 12.95 41.50 3.16
522 523 6.183360 TGGACTGATCATGAGTCACTATCTTG 60.183 42.308 6.59 10.81 41.50 3.02
523 524 5.896106 TGGACTGATCATGAGTCACTATCTT 59.104 40.000 6.59 5.16 41.50 2.40
524 525 5.301551 GTGGACTGATCATGAGTCACTATCT 59.698 44.000 6.59 0.16 41.50 1.98
525 526 5.301551 AGTGGACTGATCATGAGTCACTATC 59.698 44.000 6.59 2.19 41.50 2.08
526 527 5.207354 AGTGGACTGATCATGAGTCACTAT 58.793 41.667 6.59 0.00 41.50 2.12
527 528 4.604156 AGTGGACTGATCATGAGTCACTA 58.396 43.478 6.59 0.00 41.50 2.74
528 529 3.439154 AGTGGACTGATCATGAGTCACT 58.561 45.455 6.59 5.28 41.50 3.41
529 530 3.883830 AGTGGACTGATCATGAGTCAC 57.116 47.619 6.59 3.16 41.50 3.67
530 531 3.580022 ACAAGTGGACTGATCATGAGTCA 59.420 43.478 6.59 10.45 41.50 3.41
531 532 4.199432 ACAAGTGGACTGATCATGAGTC 57.801 45.455 0.09 3.20 39.38 3.36
532 533 5.019470 TCTACAAGTGGACTGATCATGAGT 58.981 41.667 0.09 0.00 0.00 3.41
533 534 5.588958 TCTACAAGTGGACTGATCATGAG 57.411 43.478 0.09 0.00 0.00 2.90
534 535 6.358974 TTTCTACAAGTGGACTGATCATGA 57.641 37.500 0.00 0.00 0.00 3.07
535 536 6.820152 TGATTTCTACAAGTGGACTGATCATG 59.180 38.462 0.00 0.00 0.00 3.07
536 537 6.950842 TGATTTCTACAAGTGGACTGATCAT 58.049 36.000 0.00 0.00 0.00 2.45
537 538 6.358974 TGATTTCTACAAGTGGACTGATCA 57.641 37.500 0.00 0.00 0.00 2.92
538 539 7.301068 CTTGATTTCTACAAGTGGACTGATC 57.699 40.000 0.00 0.00 39.57 2.92
548 549 7.912056 TGAGGATGAACTTGATTTCTACAAG 57.088 36.000 0.00 0.00 46.69 3.16
549 550 8.868522 AATGAGGATGAACTTGATTTCTACAA 57.131 30.769 0.00 0.00 0.00 2.41
550 551 7.554118 GGAATGAGGATGAACTTGATTTCTACA 59.446 37.037 0.00 0.00 0.00 2.74
551 552 7.772757 AGGAATGAGGATGAACTTGATTTCTAC 59.227 37.037 0.00 0.00 0.00 2.59
552 553 7.772292 CAGGAATGAGGATGAACTTGATTTCTA 59.228 37.037 0.00 0.00 0.00 2.10
553 554 6.602406 CAGGAATGAGGATGAACTTGATTTCT 59.398 38.462 0.00 0.00 0.00 2.52
554 555 6.600822 TCAGGAATGAGGATGAACTTGATTTC 59.399 38.462 0.00 0.00 0.00 2.17
555 556 6.487828 TCAGGAATGAGGATGAACTTGATTT 58.512 36.000 0.00 0.00 0.00 2.17
556 557 6.070951 TCAGGAATGAGGATGAACTTGATT 57.929 37.500 0.00 0.00 0.00 2.57
557 558 5.705397 TCAGGAATGAGGATGAACTTGAT 57.295 39.130 0.00 0.00 0.00 2.57
558 559 5.013495 AGTTCAGGAATGAGGATGAACTTGA 59.987 40.000 12.36 0.00 0.00 3.02
559 560 5.251764 AGTTCAGGAATGAGGATGAACTTG 58.748 41.667 12.36 0.00 0.00 3.16
560 561 5.250313 AGAGTTCAGGAATGAGGATGAACTT 59.750 40.000 17.59 7.83 0.00 2.66
561 562 4.782156 AGAGTTCAGGAATGAGGATGAACT 59.218 41.667 16.79 16.79 0.00 3.01
562 563 5.096443 AGAGTTCAGGAATGAGGATGAAC 57.904 43.478 8.48 8.48 0.00 3.18
563 564 6.352222 GGTTAGAGTTCAGGAATGAGGATGAA 60.352 42.308 0.00 0.00 0.00 2.57
564 565 5.129485 GGTTAGAGTTCAGGAATGAGGATGA 59.871 44.000 0.00 0.00 0.00 2.92
565 566 5.130145 AGGTTAGAGTTCAGGAATGAGGATG 59.870 44.000 0.00 0.00 0.00 3.51
566 567 5.284582 AGGTTAGAGTTCAGGAATGAGGAT 58.715 41.667 0.00 0.00 0.00 3.24
567 568 4.689062 AGGTTAGAGTTCAGGAATGAGGA 58.311 43.478 0.00 0.00 0.00 3.71
568 569 5.422331 TGTAGGTTAGAGTTCAGGAATGAGG 59.578 44.000 0.00 0.00 0.00 3.86
569 570 6.531503 TGTAGGTTAGAGTTCAGGAATGAG 57.468 41.667 0.00 0.00 0.00 2.90
570 571 6.928348 TTGTAGGTTAGAGTTCAGGAATGA 57.072 37.500 0.00 0.00 0.00 2.57
571 572 7.979444 TTTTGTAGGTTAGAGTTCAGGAATG 57.021 36.000 0.00 0.00 0.00 2.67
574 575 9.886132 GATAATTTTGTAGGTTAGAGTTCAGGA 57.114 33.333 0.00 0.00 0.00 3.86
575 576 9.667107 TGATAATTTTGTAGGTTAGAGTTCAGG 57.333 33.333 0.00 0.00 0.00 3.86
585 586 8.974408 GCGAAAAACTTGATAATTTTGTAGGTT 58.026 29.630 0.00 0.00 0.00 3.50
586 587 8.357402 AGCGAAAAACTTGATAATTTTGTAGGT 58.643 29.630 0.00 0.00 0.00 3.08
587 588 8.742554 AGCGAAAAACTTGATAATTTTGTAGG 57.257 30.769 0.00 0.00 0.00 3.18
589 590 9.320406 CGTAGCGAAAAACTTGATAATTTTGTA 57.680 29.630 0.00 0.00 0.00 2.41
590 591 8.211198 CGTAGCGAAAAACTTGATAATTTTGT 57.789 30.769 0.00 0.00 0.00 2.83
611 612 4.634004 TGAACCCATGATTGTAAAGCGTAG 59.366 41.667 0.00 0.00 32.73 3.51
612 613 4.580868 TGAACCCATGATTGTAAAGCGTA 58.419 39.130 0.00 0.00 32.73 4.42
613 614 3.417101 TGAACCCATGATTGTAAAGCGT 58.583 40.909 0.00 0.00 32.73 5.07
614 615 4.165779 GTTGAACCCATGATTGTAAAGCG 58.834 43.478 0.00 0.00 32.73 4.68
615 616 5.132897 TGTTGAACCCATGATTGTAAAGC 57.867 39.130 0.00 0.00 0.00 3.51
616 617 6.331369 ACTGTTGAACCCATGATTGTAAAG 57.669 37.500 0.00 0.00 0.00 1.85
617 618 6.239176 GGAACTGTTGAACCCATGATTGTAAA 60.239 38.462 0.00 0.00 0.00 2.01
618 619 5.242838 GGAACTGTTGAACCCATGATTGTAA 59.757 40.000 0.00 0.00 0.00 2.41
619 620 4.764823 GGAACTGTTGAACCCATGATTGTA 59.235 41.667 0.00 0.00 0.00 2.41
620 621 3.573967 GGAACTGTTGAACCCATGATTGT 59.426 43.478 0.00 0.00 0.00 2.71
621 622 3.366273 CGGAACTGTTGAACCCATGATTG 60.366 47.826 0.00 0.00 0.00 2.67
622 623 2.819608 CGGAACTGTTGAACCCATGATT 59.180 45.455 0.00 0.00 0.00 2.57
623 624 2.224769 ACGGAACTGTTGAACCCATGAT 60.225 45.455 0.00 0.00 0.00 2.45
624 625 1.142060 ACGGAACTGTTGAACCCATGA 59.858 47.619 0.00 0.00 0.00 3.07
625 626 1.535462 GACGGAACTGTTGAACCCATG 59.465 52.381 0.00 0.00 0.00 3.66
626 627 1.544759 GGACGGAACTGTTGAACCCAT 60.545 52.381 0.00 0.00 0.00 4.00
627 628 0.179040 GGACGGAACTGTTGAACCCA 60.179 55.000 0.00 0.00 0.00 4.51
628 629 0.179040 TGGACGGAACTGTTGAACCC 60.179 55.000 0.00 0.00 0.00 4.11
629 630 1.226746 CTGGACGGAACTGTTGAACC 58.773 55.000 0.00 0.00 0.00 3.62
630 631 1.226746 CCTGGACGGAACTGTTGAAC 58.773 55.000 0.00 0.00 33.16 3.18
631 632 0.834612 ACCTGGACGGAACTGTTGAA 59.165 50.000 0.00 0.00 36.31 2.69
632 633 1.616865 CTACCTGGACGGAACTGTTGA 59.383 52.381 0.00 0.00 36.31 3.18
633 634 1.939838 GCTACCTGGACGGAACTGTTG 60.940 57.143 0.00 0.00 36.31 3.33
634 635 0.320697 GCTACCTGGACGGAACTGTT 59.679 55.000 0.00 0.00 36.31 3.16
635 636 0.830444 TGCTACCTGGACGGAACTGT 60.830 55.000 0.00 0.00 36.31 3.55
636 637 0.389948 GTGCTACCTGGACGGAACTG 60.390 60.000 0.00 0.00 36.31 3.16
637 638 0.830444 TGTGCTACCTGGACGGAACT 60.830 55.000 0.00 0.00 40.08 3.01
638 639 0.249398 ATGTGCTACCTGGACGGAAC 59.751 55.000 0.00 0.00 40.08 3.62
639 640 1.479323 GTATGTGCTACCTGGACGGAA 59.521 52.381 0.00 0.00 40.08 4.30
640 641 1.108776 GTATGTGCTACCTGGACGGA 58.891 55.000 0.00 0.00 40.08 4.69
641 642 0.104304 GGTATGTGCTACCTGGACGG 59.896 60.000 0.00 0.00 45.70 4.79
642 643 3.661745 GGTATGTGCTACCTGGACG 57.338 57.895 0.00 0.00 45.70 4.79
649 650 6.704937 GGTGAAAGGTATTAGGTATGTGCTAC 59.295 42.308 0.00 0.00 0.00 3.58
650 651 6.183361 GGGTGAAAGGTATTAGGTATGTGCTA 60.183 42.308 0.00 0.00 0.00 3.49
651 652 5.397559 GGGTGAAAGGTATTAGGTATGTGCT 60.398 44.000 0.00 0.00 0.00 4.40
652 653 4.820173 GGGTGAAAGGTATTAGGTATGTGC 59.180 45.833 0.00 0.00 0.00 4.57
653 654 5.374071 GGGGTGAAAGGTATTAGGTATGTG 58.626 45.833 0.00 0.00 0.00 3.21
654 655 4.414514 GGGGGTGAAAGGTATTAGGTATGT 59.585 45.833 0.00 0.00 0.00 2.29
655 656 4.663592 AGGGGGTGAAAGGTATTAGGTATG 59.336 45.833 0.00 0.00 0.00 2.39
656 657 4.916693 AGGGGGTGAAAGGTATTAGGTAT 58.083 43.478 0.00 0.00 0.00 2.73
657 658 4.372953 AGGGGGTGAAAGGTATTAGGTA 57.627 45.455 0.00 0.00 0.00 3.08
658 659 3.231699 AGGGGGTGAAAGGTATTAGGT 57.768 47.619 0.00 0.00 0.00 3.08
659 660 5.611408 AGATAAGGGGGTGAAAGGTATTAGG 59.389 44.000 0.00 0.00 0.00 2.69
660 661 6.765355 AGATAAGGGGGTGAAAGGTATTAG 57.235 41.667 0.00 0.00 0.00 1.73
662 663 9.419667 AATATAGATAAGGGGGTGAAAGGTATT 57.580 33.333 0.00 0.00 0.00 1.89
663 664 9.419667 AAATATAGATAAGGGGGTGAAAGGTAT 57.580 33.333 0.00 0.00 0.00 2.73
664 665 8.665906 CAAATATAGATAAGGGGGTGAAAGGTA 58.334 37.037 0.00 0.00 0.00 3.08
665 666 7.130442 ACAAATATAGATAAGGGGGTGAAAGGT 59.870 37.037 0.00 0.00 0.00 3.50
666 667 7.526918 ACAAATATAGATAAGGGGGTGAAAGG 58.473 38.462 0.00 0.00 0.00 3.11
667 668 8.850156 CAACAAATATAGATAAGGGGGTGAAAG 58.150 37.037 0.00 0.00 0.00 2.62
668 669 8.561769 TCAACAAATATAGATAAGGGGGTGAAA 58.438 33.333 0.00 0.00 0.00 2.69
669 670 8.108378 TCAACAAATATAGATAAGGGGGTGAA 57.892 34.615 0.00 0.00 0.00 3.18
670 671 7.699709 TCAACAAATATAGATAAGGGGGTGA 57.300 36.000 0.00 0.00 0.00 4.02
671 672 8.760980 TTTCAACAAATATAGATAAGGGGGTG 57.239 34.615 0.00 0.00 0.00 4.61
672 673 9.951866 ATTTTCAACAAATATAGATAAGGGGGT 57.048 29.630 0.00 0.00 0.00 4.95
703 704 9.948964 TCAGTACCGAACTAATATAGTGCTATA 57.051 33.333 1.89 1.89 39.39 1.31
716 717 3.965379 TTTGGCATCAGTACCGAACTA 57.035 42.857 0.00 0.00 35.76 2.24
718 719 3.821841 CTTTTTGGCATCAGTACCGAAC 58.178 45.455 0.00 0.00 0.00 3.95
720 721 1.810151 GCTTTTTGGCATCAGTACCGA 59.190 47.619 0.00 0.00 0.00 4.69
721 722 1.465689 CGCTTTTTGGCATCAGTACCG 60.466 52.381 0.00 0.00 0.00 4.02
723 724 1.135402 CCCGCTTTTTGGCATCAGTAC 60.135 52.381 0.00 0.00 0.00 2.73
738 739 0.899019 AACAAAACCACAAACCCGCT 59.101 45.000 0.00 0.00 0.00 5.52
743 744 7.938563 TGAGCATTATAACAAAACCACAAAC 57.061 32.000 0.00 0.00 0.00 2.93
744 745 8.948631 TTTGAGCATTATAACAAAACCACAAA 57.051 26.923 0.00 0.00 30.94 2.83
769 770 1.071471 CGACAGGAGCCTTGTGGTT 59.929 57.895 0.00 0.00 35.27 3.67
796 797 0.452184 TGATCCAGTTCGCGAGAGAC 59.548 55.000 9.59 4.88 43.69 3.36
797 798 1.335182 GATGATCCAGTTCGCGAGAGA 59.665 52.381 9.59 5.38 43.69 3.10
816 817 3.004326 GCAAATGGCACGGCATGGA 62.004 57.895 6.88 0.00 43.97 3.41
828 829 0.592637 TCTTCCACGCTGTGCAAATG 59.407 50.000 0.00 0.00 31.34 2.32
877 878 3.902112 AGGGTGGTTGGTGCCTGG 61.902 66.667 0.00 0.00 0.00 4.45
878 879 2.598394 CAGGGTGGTTGGTGCCTG 60.598 66.667 0.00 0.00 0.00 4.85
879 880 4.603535 GCAGGGTGGTTGGTGCCT 62.604 66.667 0.00 0.00 0.00 4.75
880 881 4.912395 TGCAGGGTGGTTGGTGCC 62.912 66.667 0.00 0.00 34.91 5.01
881 882 3.297620 CTGCAGGGTGGTTGGTGC 61.298 66.667 5.57 0.00 36.42 5.01
882 883 2.598394 CCTGCAGGGTGGTTGGTG 60.598 66.667 26.14 0.00 0.00 4.17
883 884 4.603535 GCCTGCAGGGTGGTTGGT 62.604 66.667 33.46 0.00 37.43 3.67
884 885 4.601794 TGCCTGCAGGGTGGTTGG 62.602 66.667 33.46 7.49 37.43 3.77
885 886 3.297620 GTGCCTGCAGGGTGGTTG 61.298 66.667 33.46 7.22 37.43 3.77
886 887 3.819652 TGTGCCTGCAGGGTGGTT 61.820 61.111 33.46 0.00 37.43 3.67
887 888 4.586235 GTGTGCCTGCAGGGTGGT 62.586 66.667 33.46 0.00 37.43 4.16
919 937 0.533531 CCGCTGCTGCATGGATCTAA 60.534 55.000 16.29 0.00 39.64 2.10
937 955 6.042208 AGGGTACTATATTCTTCAGCAGTTCC 59.958 42.308 0.00 0.00 0.00 3.62
961 1023 0.179145 CGAGCAAGGTGGTACGGTAG 60.179 60.000 0.00 0.00 0.00 3.18
962 1024 1.885157 CGAGCAAGGTGGTACGGTA 59.115 57.895 0.00 0.00 0.00 4.02
963 1025 2.654877 CGAGCAAGGTGGTACGGT 59.345 61.111 0.00 0.00 0.00 4.83
964 1026 2.813908 GCGAGCAAGGTGGTACGG 60.814 66.667 0.00 0.00 0.00 4.02
965 1027 1.805945 GAGCGAGCAAGGTGGTACG 60.806 63.158 0.00 0.00 0.00 3.67
966 1028 1.805945 CGAGCGAGCAAGGTGGTAC 60.806 63.158 0.00 0.00 0.00 3.34
988 1050 2.362397 GAGTGGAAGTGTGAGACAGTGA 59.638 50.000 0.00 0.00 30.99 3.41
993 1055 1.667467 GCGAGAGTGGAAGTGTGAGAC 60.667 57.143 0.00 0.00 0.00 3.36
994 1056 0.598562 GCGAGAGTGGAAGTGTGAGA 59.401 55.000 0.00 0.00 0.00 3.27
996 1058 0.315251 CTGCGAGAGTGGAAGTGTGA 59.685 55.000 0.00 0.00 0.00 3.58
998 1060 1.005630 GCTGCGAGAGTGGAAGTGT 60.006 57.895 0.00 0.00 0.00 3.55
999 1061 1.005748 TGCTGCGAGAGTGGAAGTG 60.006 57.895 0.00 0.00 0.00 3.16
1000 1062 1.291588 CTGCTGCGAGAGTGGAAGT 59.708 57.895 0.00 0.00 0.00 3.01
1001 1063 2.099431 GCTGCTGCGAGAGTGGAAG 61.099 63.158 0.00 0.00 0.00 3.46
1003 1065 1.661498 CTAGCTGCTGCGAGAGTGGA 61.661 60.000 18.68 0.00 43.23 4.02
1004 1066 1.226916 CTAGCTGCTGCGAGAGTGG 60.227 63.158 18.68 0.00 43.23 4.00
1029 1091 3.805267 GCTCCACATCTTGCGAGG 58.195 61.111 0.00 0.00 0.00 4.63
1035 1097 1.003355 CCACACCGCTCCACATCTT 60.003 57.895 0.00 0.00 0.00 2.40
1036 1098 2.665000 CCACACCGCTCCACATCT 59.335 61.111 0.00 0.00 0.00 2.90
1444 1510 0.179153 TGATTGACGAGAGCTCAGCG 60.179 55.000 22.31 22.31 0.00 5.18
1445 1511 2.126467 GATGATTGACGAGAGCTCAGC 58.874 52.381 17.77 6.51 0.00 4.26
1447 1513 3.382546 TGATGATGATTGACGAGAGCTCA 59.617 43.478 17.77 0.00 0.00 4.26
1487 1562 4.511454 CGCTAAAGGCTAAACTATGCATCA 59.489 41.667 0.19 0.00 39.13 3.07
1492 1567 3.467803 AGGCGCTAAAGGCTAAACTATG 58.532 45.455 7.64 0.00 45.66 2.23
1495 1570 2.742204 GCTAGGCGCTAAAGGCTAAACT 60.742 50.000 7.64 0.00 46.42 2.66
1496 1571 1.598132 GCTAGGCGCTAAAGGCTAAAC 59.402 52.381 7.64 0.00 46.42 2.01
1612 1688 4.981674 TGCATGAAAGGACAAATTTTCGAC 59.018 37.500 0.00 0.00 36.36 4.20
1672 1758 9.520515 AGTACAGATTGATGGTAAAGATGTTTT 57.479 29.630 0.00 0.00 0.00 2.43
2149 2250 7.964559 CAGTCATTATGTTGGTTTCATGTGTAG 59.035 37.037 0.00 0.00 0.00 2.74
2203 2304 3.386768 TGGTTTCAGAAGAGAGGTTCG 57.613 47.619 0.00 0.00 0.00 3.95
2255 2365 8.157476 AGCTGAAATTCAGTTAAGTTTCCTCTA 58.843 33.333 22.28 0.00 45.94 2.43
2257 2367 7.080724 CAGCTGAAATTCAGTTAAGTTTCCTC 58.919 38.462 22.28 3.31 45.94 3.71
2278 2388 6.047870 CAGATGACTGAGTTTATTAGCAGCT 58.952 40.000 0.00 0.00 46.03 4.24
2279 2389 5.814705 ACAGATGACTGAGTTTATTAGCAGC 59.185 40.000 0.00 0.00 46.03 5.25
2286 2396 7.038659 GCAGTAGAACAGATGACTGAGTTTAT 58.961 38.462 5.11 0.00 46.03 1.40
2290 2400 3.829026 TGCAGTAGAACAGATGACTGAGT 59.171 43.478 5.11 0.00 46.03 3.41
2293 2403 7.084752 GCAACTGCAGTAGAACAGATGACTG 62.085 48.000 22.01 10.78 44.09 3.51
2294 2404 4.564041 CAACTGCAGTAGAACAGATGACT 58.436 43.478 22.01 0.00 38.55 3.41
2295 2405 3.124297 GCAACTGCAGTAGAACAGATGAC 59.876 47.826 22.01 4.88 38.55 3.06
2296 2406 3.329386 GCAACTGCAGTAGAACAGATGA 58.671 45.455 22.01 0.00 38.55 2.92
2297 2407 2.417933 GGCAACTGCAGTAGAACAGATG 59.582 50.000 22.01 13.07 44.36 2.90
2298 2408 2.038952 TGGCAACTGCAGTAGAACAGAT 59.961 45.455 22.01 0.00 44.36 2.90
2307 2417 1.757731 TTGGCTTGGCAACTGCAGT 60.758 52.632 15.25 15.25 44.36 4.40
2339 2449 4.802051 CCCAGGGGATGCGTGGTG 62.802 72.222 0.00 0.00 37.50 4.17
2368 2478 4.327680 ACTGAAGCCTACAAATGAAGACC 58.672 43.478 0.00 0.00 0.00 3.85
2369 2479 5.948992 AACTGAAGCCTACAAATGAAGAC 57.051 39.130 0.00 0.00 0.00 3.01
2417 2527 9.698309 CAGTTCATACTCATCGGTATTTCTTAT 57.302 33.333 0.00 0.00 30.90 1.73
2423 2533 7.385205 GCATAACAGTTCATACTCATCGGTATT 59.615 37.037 0.00 0.00 30.90 1.89
2479 2593 5.692654 TGCTGAACAAAATGACAACATGATG 59.307 36.000 0.00 0.00 36.79 3.07
2483 2597 5.518848 TCTGCTGAACAAAATGACAACAT 57.481 34.783 0.00 0.00 38.50 2.71
2484 2598 4.979943 TCTGCTGAACAAAATGACAACA 57.020 36.364 0.00 0.00 0.00 3.33
2515 2629 1.552337 AGACCATGTACAGAGCCACAG 59.448 52.381 0.33 0.00 0.00 3.66
2523 2637 3.960755 TGGGATCTGTAGACCATGTACAG 59.039 47.826 13.28 13.28 45.99 2.74
2538 2652 5.789575 AGATAGGCATACAGAAATGGGATCT 59.210 40.000 0.00 0.00 0.00 2.75
2539 2653 6.059787 AGATAGGCATACAGAAATGGGATC 57.940 41.667 0.00 0.00 0.00 3.36
2589 2703 8.543774 TCTCTGCCTTCTAAACAATATTCTTCT 58.456 33.333 0.00 0.00 0.00 2.85
2594 2708 7.577303 TCCATCTCTGCCTTCTAAACAATATT 58.423 34.615 0.00 0.00 0.00 1.28
2595 2709 7.141758 TCCATCTCTGCCTTCTAAACAATAT 57.858 36.000 0.00 0.00 0.00 1.28
2610 2726 4.074259 TGGTGTTCATTGTTCCATCTCTG 58.926 43.478 0.00 0.00 0.00 3.35
2616 2732 4.464244 TCAGTTTTGGTGTTCATTGTTCCA 59.536 37.500 0.00 0.00 0.00 3.53
2628 2744 4.573900 AGTAGAGATGCTCAGTTTTGGTG 58.426 43.478 0.00 0.00 32.06 4.17
2630 2746 4.328440 CGAAGTAGAGATGCTCAGTTTTGG 59.672 45.833 0.00 0.00 32.06 3.28
2633 2749 5.392767 TTCGAAGTAGAGATGCTCAGTTT 57.607 39.130 0.00 0.00 32.06 2.66
2637 2753 4.923871 GTGTTTTCGAAGTAGAGATGCTCA 59.076 41.667 0.00 0.00 32.06 4.26
2644 2760 9.694520 CAATTATGATGTGTTTTCGAAGTAGAG 57.305 33.333 0.00 0.00 0.00 2.43
2686 2802 2.878406 GACTTCTACTTGGTGCTTTGCA 59.122 45.455 0.00 0.00 35.60 4.08
2692 2808 3.119065 GGTCCTAGACTTCTACTTGGTGC 60.119 52.174 0.00 0.00 33.40 5.01
2712 2828 3.891366 CCTTTCTCTCATTGGTTGTTGGT 59.109 43.478 0.00 0.00 0.00 3.67
2717 2833 4.026356 AGGTCCTTTCTCTCATTGGTTG 57.974 45.455 0.00 0.00 0.00 3.77
2733 2849 8.937884 GTCTCTTTTGAAGTAAATAGAAGGTCC 58.062 37.037 0.00 0.00 0.00 4.46
2767 2883 7.189693 TGTGATCTGTTGAAACTGTTGTATC 57.810 36.000 0.00 0.00 0.00 2.24
2768 2884 7.566760 TTGTGATCTGTTGAAACTGTTGTAT 57.433 32.000 0.00 0.00 0.00 2.29
2770 2886 5.895636 TTGTGATCTGTTGAAACTGTTGT 57.104 34.783 0.00 0.00 0.00 3.32
2771 2887 7.760131 AATTTGTGATCTGTTGAAACTGTTG 57.240 32.000 0.00 0.00 0.00 3.33
2773 2889 8.131100 CACTAATTTGTGATCTGTTGAAACTGT 58.869 33.333 13.90 0.00 40.12 3.55
2774 2890 7.592533 CCACTAATTTGTGATCTGTTGAAACTG 59.407 37.037 19.69 0.00 40.12 3.16
2775 2891 7.651808 CCACTAATTTGTGATCTGTTGAAACT 58.348 34.615 19.69 0.00 40.12 2.66
2776 2892 6.363357 GCCACTAATTTGTGATCTGTTGAAAC 59.637 38.462 19.69 0.00 40.12 2.78
2786 2906 4.021192 CACCCTTTGCCACTAATTTGTGAT 60.021 41.667 19.69 0.00 40.12 3.06
2824 2944 4.756642 TGATGGCTGATGATTAATCGGAAC 59.243 41.667 10.80 3.20 43.50 3.62
2858 2978 2.418628 CCATCGTGAACATAAAAGCCGT 59.581 45.455 0.00 0.00 0.00 5.68
2876 2996 1.995542 AGGAGGTCCAAACATCACCAT 59.004 47.619 0.00 0.00 37.94 3.55
2915 3035 0.804989 AGAACAATAGCAGCAACCGC 59.195 50.000 0.00 0.00 38.99 5.68
2945 3065 0.877071 CCTCGAAGCACAAGCACATT 59.123 50.000 0.00 0.00 45.49 2.71
2987 3107 8.729805 AGAAGCCACTATTTTTGAGATCTAAG 57.270 34.615 0.00 0.00 0.00 2.18
3027 3147 0.534203 AAAGAAGAACGGAAGCGCCA 60.534 50.000 2.29 0.00 35.94 5.69
3067 3187 0.958091 CGGTGGGCAAGACAATTCAA 59.042 50.000 0.00 0.00 0.00 2.69
3165 3285 6.954944 TCACTTAACAGCTAACACACAATTC 58.045 36.000 0.00 0.00 0.00 2.17
3177 3297 3.565902 GCTCCAGTTTTCACTTAACAGCT 59.434 43.478 0.00 0.00 0.00 4.24
3178 3298 3.315191 TGCTCCAGTTTTCACTTAACAGC 59.685 43.478 0.00 0.00 0.00 4.40
3179 3299 4.816385 TCTGCTCCAGTTTTCACTTAACAG 59.184 41.667 0.00 0.00 32.61 3.16
3180 3300 4.776349 TCTGCTCCAGTTTTCACTTAACA 58.224 39.130 0.00 0.00 32.61 2.41
3181 3301 5.948992 ATCTGCTCCAGTTTTCACTTAAC 57.051 39.130 0.00 0.00 32.61 2.01
3182 3302 7.004555 TCTATCTGCTCCAGTTTTCACTTAA 57.995 36.000 0.00 0.00 32.61 1.85
3183 3303 6.605471 TCTATCTGCTCCAGTTTTCACTTA 57.395 37.500 0.00 0.00 32.61 2.24
3184 3304 5.489792 TCTATCTGCTCCAGTTTTCACTT 57.510 39.130 0.00 0.00 32.61 3.16
3193 3313 1.350071 AGGCCATCTATCTGCTCCAG 58.650 55.000 5.01 0.00 0.00 3.86
3286 3407 8.718102 ATGTACTTTACATGTGACTAATCACC 57.282 34.615 9.11 0.00 46.94 4.02
3311 3432 7.851228 AGATGTGGTCTTTCTATGATGTTACA 58.149 34.615 0.00 0.00 31.47 2.41
3312 3433 8.723942 AAGATGTGGTCTTTCTATGATGTTAC 57.276 34.615 0.00 0.00 44.80 2.50
3329 3452 9.787532 AAAATACGACATTAATTGAAGATGTGG 57.212 29.630 0.00 0.00 34.38 4.17
3364 3493 7.774134 TCCATCAACACAATGGATGAAATTAG 58.226 34.615 0.74 0.00 46.05 1.73
3377 3506 4.932799 CAGTTACGGTATCCATCAACACAA 59.067 41.667 0.00 0.00 0.00 3.33
3452 3584 5.127194 TCACATAGCAGTTCTTATTCGGACT 59.873 40.000 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.