Multiple sequence alignment - TraesCS7D01G399500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G399500 chr7D 100.000 5027 0 0 1 5027 515487271 515482245 0.000000e+00 9284.0
1 TraesCS7D01G399500 chr7D 90.758 541 42 5 41 574 628134495 628135034 0.000000e+00 715.0
2 TraesCS7D01G399500 chr7B 93.186 2128 115 20 2081 4197 546253766 546251658 0.000000e+00 3099.0
3 TraesCS7D01G399500 chr7B 90.145 1106 78 15 569 1674 546255292 546254218 0.000000e+00 1410.0
4 TraesCS7D01G399500 chr7B 91.344 543 37 7 40 574 104298330 104298870 0.000000e+00 734.0
5 TraesCS7D01G399500 chr7B 93.983 349 18 2 4668 5013 674965349 674965001 4.460000e-145 525.0
6 TraesCS7D01G399500 chr7B 83.420 386 36 13 4287 4644 546251547 546251162 2.900000e-87 333.0
7 TraesCS7D01G399500 chr7B 90.476 63 6 0 1768 1830 714890396 714890334 3.230000e-12 84.2
8 TraesCS7D01G399500 chr7B 90.476 63 6 0 1768 1830 715072153 715072091 3.230000e-12 84.2
9 TraesCS7D01G399500 chr7A 92.280 2189 82 17 2237 4364 589239562 589237400 0.000000e+00 3025.0
10 TraesCS7D01G399500 chr7A 91.296 1011 47 23 569 1557 589241107 589240116 0.000000e+00 1341.0
11 TraesCS7D01G399500 chr7A 92.857 378 22 5 4654 5027 628862546 628862170 1.230000e-150 544.0
12 TraesCS7D01G399500 chr7A 84.211 361 29 12 4312 4644 589237401 589237041 4.850000e-85 326.0
13 TraesCS7D01G399500 chr3A 90.185 540 46 4 42 574 134257684 134257145 0.000000e+00 697.0
14 TraesCS7D01G399500 chr3A 90.769 65 6 0 1767 1831 749182761 749182697 2.490000e-13 87.9
15 TraesCS7D01G399500 chr1D 90.149 538 49 3 41 574 110976190 110975653 0.000000e+00 697.0
16 TraesCS7D01G399500 chr1D 93.225 369 17 6 4654 5015 379452949 379452582 2.060000e-148 536.0
17 TraesCS7D01G399500 chr6D 89.649 541 49 4 41 574 20135098 20134558 0.000000e+00 682.0
18 TraesCS7D01G399500 chr6D 78.750 160 29 5 2911 3066 372428753 372428911 8.900000e-18 102.0
19 TraesCS7D01G399500 chr2A 89.630 540 49 4 41 574 66767196 66767734 0.000000e+00 680.0
20 TraesCS7D01G399500 chr2D 89.483 542 48 6 41 574 19634128 19634668 0.000000e+00 676.0
21 TraesCS7D01G399500 chr5D 89.591 538 47 6 44 574 220674569 220674034 0.000000e+00 675.0
22 TraesCS7D01G399500 chr3D 89.279 541 51 3 41 574 562514615 562514075 0.000000e+00 671.0
23 TraesCS7D01G399500 chr3D 90.769 65 6 0 1767 1831 114328788 114328724 2.490000e-13 87.9
24 TraesCS7D01G399500 chr3D 90.769 65 6 0 1767 1831 459193365 459193429 2.490000e-13 87.9
25 TraesCS7D01G399500 chr4B 93.478 368 18 5 4658 5019 496430405 496430772 4.430000e-150 542.0
26 TraesCS7D01G399500 chr4B 92.837 363 21 4 4658 5015 570125443 570125805 5.770000e-144 521.0
27 TraesCS7D01G399500 chr2B 93.407 364 18 4 4658 5015 694246833 694247196 7.410000e-148 534.0
28 TraesCS7D01G399500 chr2B 94.017 351 18 2 4668 5015 12880101 12879751 3.450000e-146 529.0
29 TraesCS7D01G399500 chr2B 92.308 65 5 0 1767 1831 798658595 798658531 5.360000e-15 93.5
30 TraesCS7D01G399500 chr3B 92.877 365 19 5 4658 5015 804745959 804746323 1.600000e-144 523.0
31 TraesCS7D01G399500 chr5B 92.225 373 21 6 4651 5015 508872770 508872398 5.770000e-144 521.0
32 TraesCS7D01G399500 chr4D 96.923 65 2 0 1767 1831 497901684 497901620 5.320000e-20 110.0
33 TraesCS7D01G399500 chrUn 78.528 163 30 5 2911 3069 466579059 466578898 8.900000e-18 102.0
34 TraesCS7D01G399500 chr6B 91.045 67 2 3 1767 1831 56865738 56865802 2.490000e-13 87.9
35 TraesCS7D01G399500 chr1A 90.769 65 6 0 1767 1831 554783362 554783298 2.490000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G399500 chr7D 515482245 515487271 5026 True 9284 9284 100.000000 1 5027 1 chr7D.!!$R1 5026
1 TraesCS7D01G399500 chr7D 628134495 628135034 539 False 715 715 90.758000 41 574 1 chr7D.!!$F1 533
2 TraesCS7D01G399500 chr7B 546251162 546255292 4130 True 1614 3099 88.917000 569 4644 3 chr7B.!!$R4 4075
3 TraesCS7D01G399500 chr7B 104298330 104298870 540 False 734 734 91.344000 40 574 1 chr7B.!!$F1 534
4 TraesCS7D01G399500 chr7A 589237041 589241107 4066 True 1564 3025 89.262333 569 4644 3 chr7A.!!$R2 4075
5 TraesCS7D01G399500 chr3A 134257145 134257684 539 True 697 697 90.185000 42 574 1 chr3A.!!$R1 532
6 TraesCS7D01G399500 chr1D 110975653 110976190 537 True 697 697 90.149000 41 574 1 chr1D.!!$R1 533
7 TraesCS7D01G399500 chr6D 20134558 20135098 540 True 682 682 89.649000 41 574 1 chr6D.!!$R1 533
8 TraesCS7D01G399500 chr2A 66767196 66767734 538 False 680 680 89.630000 41 574 1 chr2A.!!$F1 533
9 TraesCS7D01G399500 chr2D 19634128 19634668 540 False 676 676 89.483000 41 574 1 chr2D.!!$F1 533
10 TraesCS7D01G399500 chr5D 220674034 220674569 535 True 675 675 89.591000 44 574 1 chr5D.!!$R1 530
11 TraesCS7D01G399500 chr3D 562514075 562514615 540 True 671 671 89.279000 41 574 1 chr3D.!!$R2 533

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
33 34 0.041386 GGATAGGGGATCGGCTAGGT 59.959 60.000 0.0 0.0 35.12 3.08 F
727 742 0.109597 GCAGTCACCAATTGCCGAAG 60.110 55.000 0.0 0.0 34.69 3.79 F
1378 1401 0.179156 CATGGTTGAATCGCCTGTGC 60.179 55.000 0.0 0.0 0.00 4.57 F
1831 1876 1.271656 ACCACCTAGCAACGACTACAC 59.728 52.381 0.0 0.0 0.00 2.90 F
3232 3442 1.208535 CGCCATCAAGGTTACTACCCA 59.791 52.381 0.0 0.0 46.28 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1997 2094 1.028905 CCCAAGAGCAAACGGTTGAA 58.971 50.000 19.48 0.0 36.83 2.69 R
2591 2801 0.819582 CATTGTCAGGGGCATGTTCC 59.180 55.000 0.00 0.0 0.00 3.62 R
3228 3438 0.886563 GCACGTGTAGACTAGTGGGT 59.113 55.000 18.38 0.0 35.35 4.51 R
3534 3744 1.079819 CTTGTCGGTGAGCATCGGT 60.080 57.895 3.06 0.0 38.61 4.69 R
4876 5212 0.035458 CGCCTCCTTCTTGAAGGTGT 59.965 55.000 23.78 0.0 40.81 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.657237 CACGGATAGGGGATCGGC 59.343 66.667 0.00 0.00 38.21 5.54
29 30 1.908793 CACGGATAGGGGATCGGCT 60.909 63.158 0.00 0.00 38.21 5.52
30 31 0.611062 CACGGATAGGGGATCGGCTA 60.611 60.000 0.00 0.00 38.21 3.93
31 32 0.323542 ACGGATAGGGGATCGGCTAG 60.324 60.000 0.00 0.00 38.21 3.42
32 33 1.038130 CGGATAGGGGATCGGCTAGG 61.038 65.000 0.00 0.00 35.12 3.02
33 34 0.041386 GGATAGGGGATCGGCTAGGT 59.959 60.000 0.00 0.00 35.12 3.08
34 35 1.187087 GATAGGGGATCGGCTAGGTG 58.813 60.000 0.00 0.00 0.00 4.00
35 36 0.487772 ATAGGGGATCGGCTAGGTGT 59.512 55.000 0.00 0.00 0.00 4.16
36 37 0.178970 TAGGGGATCGGCTAGGTGTC 60.179 60.000 0.00 0.00 0.00 3.67
37 38 2.728817 GGGATCGGCTAGGTGTCG 59.271 66.667 0.00 0.00 46.47 4.35
38 39 2.728817 GGATCGGCTAGGTGTCGG 59.271 66.667 0.00 0.00 44.97 4.79
39 40 2.728817 GATCGGCTAGGTGTCGGG 59.271 66.667 0.00 0.00 44.97 5.14
66 67 4.488126 TTGCGAGAAAACTTCCAATCTG 57.512 40.909 0.00 0.00 0.00 2.90
83 84 8.124808 TCCAATCTGTTCATTTTCAATCATGA 57.875 30.769 0.00 0.00 0.00 3.07
248 250 1.895707 AGTCGGGAAGTCGTCGTGT 60.896 57.895 0.00 0.00 0.00 4.49
259 261 1.039068 TCGTCGTGTTAAGGTCCCAA 58.961 50.000 0.00 0.00 0.00 4.12
269 271 0.178961 AAGGTCCCAAAGAACCAGCC 60.179 55.000 0.00 0.00 29.47 4.85
350 352 5.521010 TGAAGAAACACAAACGTAGACGAAT 59.479 36.000 9.41 0.00 43.02 3.34
402 404 1.592669 GATCCGCCGGAGACACATG 60.593 63.158 13.12 0.00 34.05 3.21
433 440 2.503331 CAAATGCTAGACACACCACCA 58.497 47.619 0.00 0.00 0.00 4.17
463 471 1.296002 AGGCGGGGAGAACCTTATTT 58.704 50.000 0.00 0.00 40.03 1.40
513 521 3.118261 TCTTTCTGAGCAGGACACAAACT 60.118 43.478 0.00 0.00 0.00 2.66
530 538 7.312899 ACACAAACTCTAACAAAAGTTGAAGG 58.687 34.615 0.00 0.00 35.93 3.46
541 549 8.926715 AACAAAAGTTGAAGGAACATCTAAAC 57.073 30.769 0.00 0.00 36.98 2.01
588 596 2.495084 GGGATCGGTTAGAAATGCTCC 58.505 52.381 0.00 0.00 0.00 4.70
595 603 3.370103 CGGTTAGAAATGCTCCCACCTAA 60.370 47.826 0.00 0.00 0.00 2.69
621 629 2.618241 CAAAGCTACTTGCACCAACTCA 59.382 45.455 0.00 0.00 45.94 3.41
622 630 2.175878 AGCTACTTGCACCAACTCAG 57.824 50.000 0.00 0.00 45.94 3.35
624 632 2.158755 AGCTACTTGCACCAACTCAGTT 60.159 45.455 0.00 0.00 45.94 3.16
625 633 3.071023 AGCTACTTGCACCAACTCAGTTA 59.929 43.478 0.00 0.00 45.94 2.24
640 648 0.458669 AGTTATGTCAGTACGGCCGG 59.541 55.000 31.76 11.94 0.00 6.13
718 733 3.240134 GAGAGGCGGCAGTCACCAA 62.240 63.158 13.08 0.00 0.00 3.67
725 740 3.667087 GCAGTCACCAATTGCCGA 58.333 55.556 0.00 0.00 34.69 5.54
726 741 1.956043 GCAGTCACCAATTGCCGAA 59.044 52.632 0.00 0.00 34.69 4.30
727 742 0.109597 GCAGTCACCAATTGCCGAAG 60.110 55.000 0.00 0.00 34.69 3.79
728 743 1.522668 CAGTCACCAATTGCCGAAGA 58.477 50.000 0.00 0.00 0.00 2.87
729 744 2.086869 CAGTCACCAATTGCCGAAGAT 58.913 47.619 0.00 0.00 0.00 2.40
730 745 2.096496 CAGTCACCAATTGCCGAAGATC 59.904 50.000 0.00 0.00 0.00 2.75
731 746 2.026822 AGTCACCAATTGCCGAAGATCT 60.027 45.455 0.00 0.00 0.00 2.75
786 801 1.079197 ATGTGATCGAGTTGCCGCA 60.079 52.632 0.00 0.00 0.00 5.69
812 827 0.881118 CAGGGGGTTCACAAATCACG 59.119 55.000 0.00 0.00 0.00 4.35
1118 1137 3.939837 CTGCCGCTTCTTCTCGCCA 62.940 63.158 0.00 0.00 0.00 5.69
1134 1153 1.379044 CCATGGCTTCCTTCGGCTT 60.379 57.895 0.00 0.00 0.00 4.35
1322 1341 1.989165 CTGGTCGCTTTTCTTCTCTCG 59.011 52.381 0.00 0.00 0.00 4.04
1339 1362 2.939022 GGTCGTTGACTGCTGCAC 59.061 61.111 0.00 0.00 32.47 4.57
1378 1401 0.179156 CATGGTTGAATCGCCTGTGC 60.179 55.000 0.00 0.00 0.00 4.57
1408 1431 7.912383 TCTATTTTTCGGCCTTACTAATTTCG 58.088 34.615 0.00 0.00 0.00 3.46
1584 1612 7.715249 AGCGGTCACTATTGAAATAATATGTGT 59.285 33.333 0.00 0.00 31.90 3.72
1585 1613 8.342634 GCGGTCACTATTGAAATAATATGTGTT 58.657 33.333 0.00 0.00 31.90 3.32
1638 1666 4.270084 TGGATTGACGTCGAGATTAATTGC 59.730 41.667 11.90 0.00 0.00 3.56
1641 1669 4.777140 TGACGTCGAGATTAATTGCATG 57.223 40.909 11.62 0.00 0.00 4.06
1658 1686 3.181477 TGCATGTGTCTTTTTGGGTCTTG 60.181 43.478 0.00 0.00 0.00 3.02
1663 1691 5.859495 TGTGTCTTTTTGGGTCTTGTTTTT 58.141 33.333 0.00 0.00 0.00 1.94
1696 1724 6.877611 AAAACTTGTGACCGATTCATTACT 57.122 33.333 0.00 0.00 36.32 2.24
1710 1738 6.258727 CGATTCATTACTTGTCAAGGCAGTAT 59.741 38.462 16.85 3.37 0.00 2.12
1719 1747 6.204882 ACTTGTCAAGGCAGTATAAAGAACAC 59.795 38.462 16.85 0.00 0.00 3.32
1722 1750 7.097192 TGTCAAGGCAGTATAAAGAACACTAG 58.903 38.462 0.00 0.00 0.00 2.57
1728 1756 9.203163 AGGCAGTATAAAGAACACTAGAAGTAT 57.797 33.333 0.00 0.00 0.00 2.12
1742 1770 9.696572 ACACTAGAAGTATAAAGTACATCCTGA 57.303 33.333 0.00 0.00 0.00 3.86
1746 1774 7.887381 AGAAGTATAAAGTACATCCTGATCCG 58.113 38.462 0.00 0.00 0.00 4.18
1747 1775 7.506261 AGAAGTATAAAGTACATCCTGATCCGT 59.494 37.037 0.00 0.00 0.00 4.69
1748 1776 8.701908 AAGTATAAAGTACATCCTGATCCGTA 57.298 34.615 0.00 0.00 0.00 4.02
1749 1777 8.338072 AGTATAAAGTACATCCTGATCCGTAG 57.662 38.462 0.00 0.00 0.00 3.51
1750 1778 8.162085 AGTATAAAGTACATCCTGATCCGTAGA 58.838 37.037 0.00 0.00 0.00 2.59
1751 1779 8.958506 GTATAAAGTACATCCTGATCCGTAGAT 58.041 37.037 0.00 0.00 34.57 1.98
1765 1810 6.657966 TGATCCGTAGATAACCTAACGATGAT 59.342 38.462 0.00 0.00 30.90 2.45
1830 1875 1.542915 GACCACCTAGCAACGACTACA 59.457 52.381 0.00 0.00 0.00 2.74
1831 1876 1.271656 ACCACCTAGCAACGACTACAC 59.728 52.381 0.00 0.00 0.00 2.90
1832 1877 1.614385 CACCTAGCAACGACTACACG 58.386 55.000 0.00 0.00 39.31 4.49
1873 1918 9.798994 TTTAGTTTCTCTAAGTATTGGATCGAC 57.201 33.333 0.00 0.00 39.42 4.20
1874 1919 7.406031 AGTTTCTCTAAGTATTGGATCGACA 57.594 36.000 0.00 0.00 34.15 4.35
1875 1920 7.484975 AGTTTCTCTAAGTATTGGATCGACAG 58.515 38.462 0.00 0.00 34.15 3.51
1876 1921 7.339721 AGTTTCTCTAAGTATTGGATCGACAGA 59.660 37.037 0.00 0.00 34.15 3.41
1877 1922 6.869315 TCTCTAAGTATTGGATCGACAGAG 57.131 41.667 0.00 0.00 34.15 3.35
1878 1923 6.592870 TCTCTAAGTATTGGATCGACAGAGA 58.407 40.000 0.00 0.00 34.15 3.10
1879 1924 6.708502 TCTCTAAGTATTGGATCGACAGAGAG 59.291 42.308 0.00 0.00 34.15 3.20
1880 1925 6.358178 TCTAAGTATTGGATCGACAGAGAGT 58.642 40.000 0.00 0.00 27.35 3.24
1881 1926 4.909696 AGTATTGGATCGACAGAGAGTG 57.090 45.455 0.00 0.00 0.00 3.51
1910 2007 6.325028 TGTGATTTTGTCCCACCAAAAATAGA 59.675 34.615 3.51 0.00 44.76 1.98
1964 2061 8.256611 TCTTTCCAGTATTCTTCGAGAAAATG 57.743 34.615 2.21 2.56 37.82 2.32
2013 2110 1.676006 CACCTTCAACCGTTTGCTCTT 59.324 47.619 0.00 0.00 32.17 2.85
2024 2121 1.452145 TTTGCTCTTGGGTTCGTGCC 61.452 55.000 0.00 0.00 0.00 5.01
2180 2370 7.865875 TGCAATGAAACATTATGTAACACAC 57.134 32.000 0.00 0.00 0.00 3.82
2182 2372 8.787852 TGCAATGAAACATTATGTAACACACTA 58.212 29.630 0.00 0.00 0.00 2.74
2219 2409 7.916914 TTTTGTCCAATACTAAAGGAGTAGC 57.083 36.000 0.00 0.00 43.99 3.58
2226 2416 6.483640 CCAATACTAAAGGAGTAGCATGAACC 59.516 42.308 0.00 0.00 43.99 3.62
2228 2418 5.346181 ACTAAAGGAGTAGCATGAACCTC 57.654 43.478 0.00 0.00 36.27 3.85
2236 2426 4.605183 AGTAGCATGAACCTCAGAGTAGT 58.395 43.478 0.00 0.00 0.00 2.73
2245 2435 2.026169 ACCTCAGAGTAGTGATGGACGA 60.026 50.000 0.00 0.00 0.00 4.20
2246 2436 3.218453 CCTCAGAGTAGTGATGGACGAT 58.782 50.000 0.00 0.00 0.00 3.73
2280 2470 3.633525 ACGGAATATTGCATGCATGACTT 59.366 39.130 30.64 14.86 0.00 3.01
2281 2471 4.224433 CGGAATATTGCATGCATGACTTC 58.776 43.478 30.64 19.64 0.00 3.01
2284 2474 6.220930 GGAATATTGCATGCATGACTTCATT 58.779 36.000 30.64 19.21 33.61 2.57
2285 2475 6.365247 GGAATATTGCATGCATGACTTCATTC 59.635 38.462 30.64 24.56 33.61 2.67
2302 2493 9.309516 GACTTCATTCCATAATGTAAGACGTTA 57.690 33.333 0.00 0.00 42.66 3.18
2327 2520 6.384258 TTGACTACAAAATGCTGTTTGCTA 57.616 33.333 11.21 4.66 41.33 3.49
2354 2547 7.420800 AGAACAGCTGAAGTGAACAAAAATAG 58.579 34.615 23.35 0.00 0.00 1.73
2355 2548 5.523369 ACAGCTGAAGTGAACAAAAATAGC 58.477 37.500 23.35 0.00 0.00 2.97
2420 2616 2.360801 CCAGAGACCAAGTAGCTAGAGC 59.639 54.545 0.00 0.00 42.49 4.09
2456 2652 1.351017 ACCCACCACCAGTACAGATTG 59.649 52.381 0.00 0.00 0.00 2.67
2591 2801 4.952262 TCTGAATTTTCTGATCCAAGCG 57.048 40.909 0.00 0.00 31.41 4.68
2606 2816 3.134127 GCGGAACATGCCCCTGAC 61.134 66.667 0.00 0.00 0.00 3.51
3228 3438 1.820519 ACGACGCCATCAAGGTTACTA 59.179 47.619 0.00 0.00 40.61 1.82
3232 3442 1.208535 CGCCATCAAGGTTACTACCCA 59.791 52.381 0.00 0.00 46.28 4.51
3305 3515 3.687212 TCGAACAATATTGACATGGCGTT 59.313 39.130 22.16 3.03 0.00 4.84
3534 3744 2.108157 AACAACGCGAGGCTGACA 59.892 55.556 15.93 0.00 0.00 3.58
3543 3753 1.520342 GAGGCTGACACCGATGCTC 60.520 63.158 0.00 0.00 33.69 4.26
3663 3873 4.394712 CTGGTGGACTCCGGCACC 62.395 72.222 18.97 18.97 38.15 5.01
4059 4269 7.389053 GGCTCCTGGTGATTATTGAATAACTAG 59.611 40.741 0.00 0.00 35.62 2.57
4063 4273 7.721399 CCTGGTGATTATTGAATAACTAGGCTT 59.279 37.037 0.00 0.00 44.22 4.35
4065 4275 8.271458 TGGTGATTATTGAATAACTAGGCTTCA 58.729 33.333 0.00 0.00 0.00 3.02
4095 4305 6.716628 CCAAATGGTCAGTGGCTATACATAAT 59.283 38.462 0.00 0.00 0.00 1.28
4096 4306 7.882791 CCAAATGGTCAGTGGCTATACATAATA 59.117 37.037 0.00 0.00 0.00 0.98
4098 4308 8.848474 AATGGTCAGTGGCTATACATAATAAC 57.152 34.615 0.00 0.00 0.00 1.89
4100 4310 8.715190 TGGTCAGTGGCTATACATAATAACTA 57.285 34.615 0.00 0.00 0.00 2.24
4101 4311 9.321532 TGGTCAGTGGCTATACATAATAACTAT 57.678 33.333 0.00 0.00 0.00 2.12
4168 4388 2.276201 TGGAATTGGTACGCTTCGATG 58.724 47.619 0.00 0.00 0.00 3.84
4201 4447 2.105477 ACAGAGAAGTGGTGACAAGCAT 59.895 45.455 0.00 0.00 46.06 3.79
4209 4455 4.507710 AGTGGTGACAAGCATATACACAG 58.492 43.478 0.00 0.00 46.06 3.66
4214 4460 3.134458 GACAAGCATATACACAGAGGGC 58.866 50.000 0.00 0.00 0.00 5.19
4226 4472 2.428171 CACAGAGGGCATATTTGGTTGG 59.572 50.000 0.00 0.00 0.00 3.77
4234 4480 1.410153 CATATTTGGTTGGCTGGGCTC 59.590 52.381 0.00 0.00 0.00 4.70
4236 4482 3.706315 TATTTGGTTGGCTGGGCTCCC 62.706 57.143 0.00 0.00 0.00 4.30
4239 4485 3.650950 GTTGGCTGGGCTCCCTCA 61.651 66.667 6.50 0.00 36.94 3.86
4244 4490 0.615827 GGCTGGGCTCCCTCAAATTT 60.616 55.000 6.50 0.00 36.94 1.82
4246 4492 1.892329 GCTGGGCTCCCTCAAATTTGA 60.892 52.381 19.45 19.45 36.94 2.69
4251 4508 3.118992 GGGCTCCCTCAAATTTGATTGTC 60.119 47.826 20.76 12.14 36.46 3.18
4266 4523 2.032681 GTCAAAGCAGCCCTCGGT 59.967 61.111 0.00 0.00 0.00 4.69
4282 4539 0.390472 CGGTCTGGCTGAGAAGAACC 60.390 60.000 0.00 0.00 30.26 3.62
4285 4542 0.541998 TCTGGCTGAGAAGAACCGGA 60.542 55.000 9.46 0.00 35.19 5.14
4340 4648 3.049674 CGCAACGTGGCATGAGGT 61.050 61.111 16.68 0.00 0.00 3.85
4401 4709 4.470304 GTGTTAACTCCCTATTCCACTCCT 59.530 45.833 7.22 0.00 0.00 3.69
4416 4724 4.838423 TCCACTCCTCTTATCACTCAAACA 59.162 41.667 0.00 0.00 0.00 2.83
4426 4734 7.445121 TCTTATCACTCAAACACATGTTCTCT 58.555 34.615 0.00 0.00 37.25 3.10
4428 4736 4.051237 TCACTCAAACACATGTTCTCTCG 58.949 43.478 0.00 0.00 37.25 4.04
4454 4776 1.926511 CTTCGTTGCCATGCTCCACC 61.927 60.000 0.00 0.00 0.00 4.61
4457 4779 1.811860 GTTGCCATGCTCCACCATC 59.188 57.895 0.00 0.00 0.00 3.51
4479 4801 1.699752 CCTCCAAATCCTTGCCCCT 59.300 57.895 0.00 0.00 0.00 4.79
4480 4802 0.926293 CCTCCAAATCCTTGCCCCTA 59.074 55.000 0.00 0.00 0.00 3.53
4481 4803 1.410224 CCTCCAAATCCTTGCCCCTAC 60.410 57.143 0.00 0.00 0.00 3.18
4482 4804 1.284785 CTCCAAATCCTTGCCCCTACA 59.715 52.381 0.00 0.00 0.00 2.74
4483 4805 1.005450 TCCAAATCCTTGCCCCTACAC 59.995 52.381 0.00 0.00 0.00 2.90
4484 4806 1.005924 CCAAATCCTTGCCCCTACACT 59.994 52.381 0.00 0.00 0.00 3.55
4485 4807 2.241176 CCAAATCCTTGCCCCTACACTA 59.759 50.000 0.00 0.00 0.00 2.74
4516 4852 1.347817 GCGTTGAGTCGAGGAGCTTG 61.348 60.000 4.19 0.00 0.00 4.01
4553 4889 3.431486 GGAGAGGATGTTGAAGGCTACAG 60.431 52.174 0.00 0.00 33.46 2.74
4628 4964 2.022195 GCACCTCGAGTATGACCTGTA 58.978 52.381 12.31 0.00 0.00 2.74
4638 4974 5.236911 CGAGTATGACCTGTAGGACTTCTAC 59.763 48.000 4.64 3.37 46.49 2.59
4646 4982 1.266446 GTAGGACTTCTACGATCCGGC 59.734 57.143 0.00 0.00 38.96 6.13
4647 4983 1.008767 GGACTTCTACGATCCGGCG 60.009 63.158 0.00 0.00 37.29 6.46
4648 4984 1.008767 GACTTCTACGATCCGGCGG 60.009 63.158 22.51 22.51 35.12 6.13
4649 4985 2.335369 CTTCTACGATCCGGCGGG 59.665 66.667 27.98 13.02 35.12 6.13
4650 4986 3.843117 CTTCTACGATCCGGCGGGC 62.843 68.421 27.98 17.50 35.12 6.13
4652 4988 4.944372 CTACGATCCGGCGGGCAC 62.944 72.222 27.98 16.09 35.12 5.01
4655 4991 4.215742 CGATCCGGCGGGCACTTA 62.216 66.667 27.98 5.47 0.00 2.24
4656 4992 2.426023 GATCCGGCGGGCACTTAT 59.574 61.111 27.98 11.09 0.00 1.73
4657 4993 1.961277 GATCCGGCGGGCACTTATG 60.961 63.158 27.98 0.00 0.00 1.90
4658 4994 2.377628 GATCCGGCGGGCACTTATGA 62.378 60.000 27.98 2.79 0.00 2.15
4659 4995 1.978455 ATCCGGCGGGCACTTATGAA 61.978 55.000 27.98 1.90 0.00 2.57
4660 4996 1.747367 CCGGCGGGCACTTATGAAA 60.747 57.895 20.56 0.00 0.00 2.69
4661 4997 1.309499 CCGGCGGGCACTTATGAAAA 61.309 55.000 20.56 0.00 0.00 2.29
4662 4998 0.523966 CGGCGGGCACTTATGAAAAA 59.476 50.000 0.00 0.00 0.00 1.94
4663 4999 1.467374 CGGCGGGCACTTATGAAAAAG 60.467 52.381 0.00 0.00 0.00 2.27
4664 5000 1.135112 GGCGGGCACTTATGAAAAAGG 60.135 52.381 0.00 0.00 0.00 3.11
4665 5001 1.544246 GCGGGCACTTATGAAAAAGGT 59.456 47.619 0.00 0.00 0.00 3.50
4666 5002 2.029380 GCGGGCACTTATGAAAAAGGTT 60.029 45.455 0.00 0.00 0.00 3.50
4667 5003 3.833442 CGGGCACTTATGAAAAAGGTTC 58.167 45.455 0.00 0.00 0.00 3.62
4668 5004 3.366985 CGGGCACTTATGAAAAAGGTTCC 60.367 47.826 0.00 0.00 0.00 3.62
4669 5005 3.056107 GGGCACTTATGAAAAAGGTTCCC 60.056 47.826 0.00 0.00 0.00 3.97
4670 5006 3.056107 GGCACTTATGAAAAAGGTTCCCC 60.056 47.826 0.00 0.00 0.00 4.81
4671 5007 3.366985 GCACTTATGAAAAAGGTTCCCCG 60.367 47.826 0.00 0.00 35.12 5.73
4672 5008 2.823747 ACTTATGAAAAAGGTTCCCCGC 59.176 45.455 0.00 0.00 35.12 6.13
4673 5009 2.891191 TATGAAAAAGGTTCCCCGCT 57.109 45.000 0.00 0.00 35.12 5.52
4674 5010 2.009681 ATGAAAAAGGTTCCCCGCTT 57.990 45.000 0.00 0.00 35.12 4.68
4675 5011 1.783071 TGAAAAAGGTTCCCCGCTTT 58.217 45.000 0.00 0.00 35.12 3.51
4676 5012 1.410882 TGAAAAAGGTTCCCCGCTTTG 59.589 47.619 0.00 0.00 35.12 2.77
4677 5013 1.411246 GAAAAAGGTTCCCCGCTTTGT 59.589 47.619 0.00 0.00 35.12 2.83
4678 5014 2.368311 AAAAGGTTCCCCGCTTTGTA 57.632 45.000 0.00 0.00 35.12 2.41
4679 5015 2.597578 AAAGGTTCCCCGCTTTGTAT 57.402 45.000 0.00 0.00 35.12 2.29
4680 5016 2.597578 AAGGTTCCCCGCTTTGTATT 57.402 45.000 0.00 0.00 35.12 1.89
4681 5017 3.724732 AAGGTTCCCCGCTTTGTATTA 57.275 42.857 0.00 0.00 35.12 0.98
4682 5018 2.995283 AGGTTCCCCGCTTTGTATTAC 58.005 47.619 0.00 0.00 35.12 1.89
4683 5019 2.306512 AGGTTCCCCGCTTTGTATTACA 59.693 45.455 0.00 0.00 35.12 2.41
4684 5020 3.083293 GGTTCCCCGCTTTGTATTACAA 58.917 45.455 5.14 5.14 36.11 2.41
4685 5021 3.506844 GGTTCCCCGCTTTGTATTACAAA 59.493 43.478 18.39 18.39 44.91 2.83
4696 5032 6.561737 TTTGTATTACAAAGCAACCATCGA 57.438 33.333 16.17 0.00 42.55 3.59
4697 5033 6.751514 TTGTATTACAAAGCAACCATCGAT 57.248 33.333 6.79 0.00 34.76 3.59
4698 5034 7.851387 TTGTATTACAAAGCAACCATCGATA 57.149 32.000 6.79 0.00 34.76 2.92
4699 5035 7.241663 TGTATTACAAAGCAACCATCGATAC 57.758 36.000 0.00 0.00 0.00 2.24
4700 5036 6.819146 TGTATTACAAAGCAACCATCGATACA 59.181 34.615 0.00 0.00 0.00 2.29
4701 5037 6.942532 ATTACAAAGCAACCATCGATACAT 57.057 33.333 0.00 0.00 0.00 2.29
4702 5038 4.882671 ACAAAGCAACCATCGATACATC 57.117 40.909 0.00 0.00 0.00 3.06
4703 5039 3.627577 ACAAAGCAACCATCGATACATCC 59.372 43.478 0.00 0.00 0.00 3.51
4704 5040 3.558931 AAGCAACCATCGATACATCCA 57.441 42.857 0.00 0.00 0.00 3.41
4705 5041 3.558931 AGCAACCATCGATACATCCAA 57.441 42.857 0.00 0.00 0.00 3.53
4706 5042 4.090761 AGCAACCATCGATACATCCAAT 57.909 40.909 0.00 0.00 0.00 3.16
4707 5043 3.817084 AGCAACCATCGATACATCCAATG 59.183 43.478 0.00 0.00 0.00 2.82
4708 5044 3.814842 GCAACCATCGATACATCCAATGA 59.185 43.478 0.00 0.00 0.00 2.57
4709 5045 4.456911 GCAACCATCGATACATCCAATGAT 59.543 41.667 0.00 0.00 0.00 2.45
4710 5046 5.643348 GCAACCATCGATACATCCAATGATA 59.357 40.000 0.00 0.00 0.00 2.15
4711 5047 6.183360 GCAACCATCGATACATCCAATGATAG 60.183 42.308 0.00 0.00 0.00 2.08
4712 5048 5.982356 ACCATCGATACATCCAATGATAGG 58.018 41.667 0.00 0.00 0.00 2.57
4713 5049 5.485353 ACCATCGATACATCCAATGATAGGT 59.515 40.000 0.00 0.00 0.00 3.08
4714 5050 5.814188 CCATCGATACATCCAATGATAGGTG 59.186 44.000 0.00 0.00 0.00 4.00
4715 5051 4.820897 TCGATACATCCAATGATAGGTGC 58.179 43.478 0.00 0.00 0.00 5.01
4716 5052 4.528206 TCGATACATCCAATGATAGGTGCT 59.472 41.667 0.00 0.00 0.00 4.40
4717 5053 4.628766 CGATACATCCAATGATAGGTGCTG 59.371 45.833 0.00 0.00 0.00 4.41
4718 5054 3.219176 ACATCCAATGATAGGTGCTGG 57.781 47.619 0.00 0.00 0.00 4.85
4719 5055 2.158564 ACATCCAATGATAGGTGCTGGG 60.159 50.000 0.00 0.00 0.00 4.45
4720 5056 0.846015 TCCAATGATAGGTGCTGGGG 59.154 55.000 0.00 0.00 0.00 4.96
4721 5057 0.825010 CCAATGATAGGTGCTGGGGC 60.825 60.000 0.00 0.00 39.26 5.80
4722 5058 0.825010 CAATGATAGGTGCTGGGGCC 60.825 60.000 0.00 0.00 37.74 5.80
4723 5059 2.343475 AATGATAGGTGCTGGGGCCG 62.343 60.000 0.00 0.00 37.74 6.13
4724 5060 4.937431 GATAGGTGCTGGGGCCGC 62.937 72.222 14.01 14.01 37.74 6.53
4735 5071 3.910490 GGGCCGCAGCACAAACAA 61.910 61.111 0.00 0.00 44.19 2.83
4736 5072 2.355009 GGCCGCAGCACAAACAAG 60.355 61.111 0.00 0.00 42.56 3.16
4737 5073 3.032033 GCCGCAGCACAAACAAGC 61.032 61.111 0.00 0.00 39.53 4.01
4738 5074 2.723746 CCGCAGCACAAACAAGCT 59.276 55.556 0.00 0.00 42.94 3.74
4739 5075 1.370900 CCGCAGCACAAACAAGCTC 60.371 57.895 0.00 0.00 39.50 4.09
4740 5076 1.356270 CGCAGCACAAACAAGCTCA 59.644 52.632 0.00 0.00 39.50 4.26
4741 5077 0.248580 CGCAGCACAAACAAGCTCAA 60.249 50.000 0.00 0.00 39.50 3.02
4742 5078 1.798446 CGCAGCACAAACAAGCTCAAA 60.798 47.619 0.00 0.00 39.50 2.69
4743 5079 2.270047 GCAGCACAAACAAGCTCAAAA 58.730 42.857 0.00 0.00 39.50 2.44
4744 5080 2.672381 GCAGCACAAACAAGCTCAAAAA 59.328 40.909 0.00 0.00 39.50 1.94
4768 5104 8.988064 AAAACAAAGAAGAAAGGAAGAGAAAC 57.012 30.769 0.00 0.00 0.00 2.78
4769 5105 7.703058 AACAAAGAAGAAAGGAAGAGAAACA 57.297 32.000 0.00 0.00 0.00 2.83
4770 5106 7.703058 ACAAAGAAGAAAGGAAGAGAAACAA 57.297 32.000 0.00 0.00 0.00 2.83
4771 5107 8.122472 ACAAAGAAGAAAGGAAGAGAAACAAA 57.878 30.769 0.00 0.00 0.00 2.83
4772 5108 8.753133 ACAAAGAAGAAAGGAAGAGAAACAAAT 58.247 29.630 0.00 0.00 0.00 2.32
4773 5109 9.028185 CAAAGAAGAAAGGAAGAGAAACAAATG 57.972 33.333 0.00 0.00 0.00 2.32
4774 5110 6.743110 AGAAGAAAGGAAGAGAAACAAATGC 58.257 36.000 0.00 0.00 0.00 3.56
4775 5111 5.459536 AGAAAGGAAGAGAAACAAATGCC 57.540 39.130 0.00 0.00 0.00 4.40
4776 5112 4.895297 AGAAAGGAAGAGAAACAAATGCCA 59.105 37.500 0.00 0.00 0.00 4.92
4777 5113 5.363580 AGAAAGGAAGAGAAACAAATGCCAA 59.636 36.000 0.00 0.00 0.00 4.52
4778 5114 4.590850 AGGAAGAGAAACAAATGCCAAC 57.409 40.909 0.00 0.00 0.00 3.77
4779 5115 4.218312 AGGAAGAGAAACAAATGCCAACT 58.782 39.130 0.00 0.00 0.00 3.16
4780 5116 5.385198 AGGAAGAGAAACAAATGCCAACTA 58.615 37.500 0.00 0.00 0.00 2.24
4781 5117 5.241728 AGGAAGAGAAACAAATGCCAACTAC 59.758 40.000 0.00 0.00 0.00 2.73
4782 5118 4.749245 AGAGAAACAAATGCCAACTACG 57.251 40.909 0.00 0.00 0.00 3.51
4783 5119 3.502211 AGAGAAACAAATGCCAACTACGG 59.498 43.478 0.00 0.00 0.00 4.02
4784 5120 3.482436 AGAAACAAATGCCAACTACGGA 58.518 40.909 0.00 0.00 0.00 4.69
4785 5121 3.886505 AGAAACAAATGCCAACTACGGAA 59.113 39.130 0.00 0.00 0.00 4.30
4786 5122 3.915437 AACAAATGCCAACTACGGAAG 57.085 42.857 0.00 0.00 0.00 3.46
4787 5123 3.134574 ACAAATGCCAACTACGGAAGA 57.865 42.857 0.00 0.00 0.00 2.87
4788 5124 3.686016 ACAAATGCCAACTACGGAAGAT 58.314 40.909 0.00 0.00 0.00 2.40
4789 5125 3.689649 ACAAATGCCAACTACGGAAGATC 59.310 43.478 0.00 0.00 0.00 2.75
4790 5126 2.225068 ATGCCAACTACGGAAGATCG 57.775 50.000 0.00 0.00 0.00 3.69
4791 5127 1.179152 TGCCAACTACGGAAGATCGA 58.821 50.000 0.00 0.00 0.00 3.59
4792 5128 1.135199 TGCCAACTACGGAAGATCGAC 60.135 52.381 0.00 0.00 0.00 4.20
4793 5129 1.823828 CCAACTACGGAAGATCGACG 58.176 55.000 0.00 5.42 0.00 5.12
4794 5130 1.399440 CCAACTACGGAAGATCGACGA 59.601 52.381 0.00 0.00 0.00 4.20
4795 5131 2.159476 CCAACTACGGAAGATCGACGAA 60.159 50.000 0.00 0.00 0.00 3.85
4796 5132 3.495193 CAACTACGGAAGATCGACGAAA 58.505 45.455 0.00 1.70 0.00 3.46
4797 5133 3.128465 ACTACGGAAGATCGACGAAAC 57.872 47.619 0.00 0.00 0.00 2.78
4798 5134 2.099621 CTACGGAAGATCGACGAAACG 58.900 52.381 0.00 5.13 0.00 3.60
4799 5135 0.518636 ACGGAAGATCGACGAAACGA 59.481 50.000 0.00 0.00 46.04 3.85
4800 5136 1.069022 ACGGAAGATCGACGAAACGAA 60.069 47.619 0.00 0.00 45.16 3.85
4801 5137 1.578023 CGGAAGATCGACGAAACGAAG 59.422 52.381 0.00 0.00 45.16 3.79
4802 5138 2.726989 CGGAAGATCGACGAAACGAAGA 60.727 50.000 0.00 0.00 45.16 2.87
4803 5139 3.436496 GGAAGATCGACGAAACGAAGAT 58.564 45.455 0.00 0.00 45.16 2.40
4804 5140 3.240861 GGAAGATCGACGAAACGAAGATG 59.759 47.826 0.00 0.00 45.16 2.90
4805 5141 3.759527 AGATCGACGAAACGAAGATGA 57.240 42.857 0.00 0.00 45.16 2.92
4806 5142 3.427243 AGATCGACGAAACGAAGATGAC 58.573 45.455 0.00 0.00 45.16 3.06
4807 5143 1.973138 TCGACGAAACGAAGATGACC 58.027 50.000 0.00 0.00 39.34 4.02
4808 5144 0.633733 CGACGAAACGAAGATGACCG 59.366 55.000 0.00 0.00 35.09 4.79
4809 5145 0.989890 GACGAAACGAAGATGACCGG 59.010 55.000 0.00 0.00 0.00 5.28
4810 5146 1.012486 ACGAAACGAAGATGACCGGC 61.012 55.000 0.00 0.00 0.00 6.13
4811 5147 1.708027 GAAACGAAGATGACCGGCG 59.292 57.895 0.00 0.00 0.00 6.46
4812 5148 0.734942 GAAACGAAGATGACCGGCGA 60.735 55.000 9.30 0.00 0.00 5.54
4813 5149 1.012486 AAACGAAGATGACCGGCGAC 61.012 55.000 9.30 2.28 0.00 5.19
4814 5150 2.582498 CGAAGATGACCGGCGACC 60.582 66.667 9.30 0.00 0.00 4.79
4816 5152 3.352338 GAAGATGACCGGCGACCGT 62.352 63.158 9.30 0.00 46.80 4.83
4817 5153 2.830704 GAAGATGACCGGCGACCGTT 62.831 60.000 9.30 3.00 46.80 4.44
4818 5154 3.186047 GATGACCGGCGACCGTTG 61.186 66.667 9.30 5.53 46.80 4.10
4825 5161 2.746277 GGCGACCGTTGCATCCTT 60.746 61.111 12.89 0.00 0.00 3.36
4826 5162 2.750888 GGCGACCGTTGCATCCTTC 61.751 63.158 12.89 0.00 0.00 3.46
4827 5163 3.081133 CGACCGTTGCATCCTTCG 58.919 61.111 0.00 0.00 0.00 3.79
4828 5164 2.452813 CGACCGTTGCATCCTTCGG 61.453 63.158 11.25 11.25 46.98 4.30
4829 5165 1.079405 GACCGTTGCATCCTTCGGA 60.079 57.895 16.99 0.00 44.86 4.55
4830 5166 1.079127 ACCGTTGCATCCTTCGGAG 60.079 57.895 16.99 0.00 44.86 4.63
4831 5167 1.218047 CCGTTGCATCCTTCGGAGA 59.782 57.895 0.00 0.00 44.86 3.71
4832 5168 0.391130 CCGTTGCATCCTTCGGAGAA 60.391 55.000 0.00 0.00 45.90 2.87
4833 5169 1.002366 CGTTGCATCCTTCGGAGAAG 58.998 55.000 0.00 2.99 45.90 2.85
4834 5170 1.673033 CGTTGCATCCTTCGGAGAAGT 60.673 52.381 8.70 0.00 45.90 3.01
4835 5171 2.416836 CGTTGCATCCTTCGGAGAAGTA 60.417 50.000 8.70 0.00 45.90 2.24
4836 5172 2.930682 GTTGCATCCTTCGGAGAAGTAC 59.069 50.000 8.70 0.00 45.90 2.73
4837 5173 1.480954 TGCATCCTTCGGAGAAGTACC 59.519 52.381 8.70 0.00 45.90 3.34
4838 5174 1.480954 GCATCCTTCGGAGAAGTACCA 59.519 52.381 8.70 0.00 45.90 3.25
4839 5175 2.738964 GCATCCTTCGGAGAAGTACCAC 60.739 54.545 8.70 0.00 45.90 4.16
4840 5176 1.553706 TCCTTCGGAGAAGTACCACC 58.446 55.000 8.70 0.00 45.90 4.61
4841 5177 1.203087 TCCTTCGGAGAAGTACCACCA 60.203 52.381 8.70 0.00 45.90 4.17
4842 5178 1.067071 CCTTCGGAGAAGTACCACCAC 60.067 57.143 8.70 0.00 45.90 4.16
4843 5179 0.599558 TTCGGAGAAGTACCACCACG 59.400 55.000 0.00 0.00 45.90 4.94
4844 5180 0.538057 TCGGAGAAGTACCACCACGT 60.538 55.000 0.00 0.00 0.00 4.49
4845 5181 0.316204 CGGAGAAGTACCACCACGTT 59.684 55.000 0.00 0.00 0.00 3.99
4846 5182 1.668047 CGGAGAAGTACCACCACGTTC 60.668 57.143 0.00 0.00 0.00 3.95
4847 5183 1.337541 GGAGAAGTACCACCACGTTCC 60.338 57.143 0.00 0.00 0.00 3.62
4848 5184 0.683412 AGAAGTACCACCACGTTCCC 59.317 55.000 0.00 0.00 0.00 3.97
4849 5185 0.393820 GAAGTACCACCACGTTCCCA 59.606 55.000 0.00 0.00 0.00 4.37
4850 5186 0.395312 AAGTACCACCACGTTCCCAG 59.605 55.000 0.00 0.00 0.00 4.45
4851 5187 1.670083 GTACCACCACGTTCCCAGC 60.670 63.158 0.00 0.00 0.00 4.85
4852 5188 2.141448 TACCACCACGTTCCCAGCA 61.141 57.895 0.00 0.00 0.00 4.41
4853 5189 2.386064 TACCACCACGTTCCCAGCAC 62.386 60.000 0.00 0.00 0.00 4.40
4854 5190 2.978010 CACCACGTTCCCAGCACC 60.978 66.667 0.00 0.00 0.00 5.01
4855 5191 4.265056 ACCACGTTCCCAGCACCC 62.265 66.667 0.00 0.00 0.00 4.61
4857 5193 4.308458 CACGTTCCCAGCACCCGA 62.308 66.667 0.00 0.00 0.00 5.14
4858 5194 3.552384 ACGTTCCCAGCACCCGAA 61.552 61.111 0.00 0.00 0.00 4.30
4859 5195 2.742372 CGTTCCCAGCACCCGAAG 60.742 66.667 0.00 0.00 0.00 3.79
4860 5196 3.056328 GTTCCCAGCACCCGAAGC 61.056 66.667 0.00 0.00 0.00 3.86
4861 5197 4.697756 TTCCCAGCACCCGAAGCG 62.698 66.667 0.00 0.00 37.01 4.68
4873 5209 3.849953 GAAGCGCCGCGTACCAAG 61.850 66.667 15.34 0.00 0.00 3.61
4877 5213 4.439472 CGCCGCGTACCAAGCAAC 62.439 66.667 4.92 0.00 34.19 4.17
4878 5214 3.350612 GCCGCGTACCAAGCAACA 61.351 61.111 4.92 0.00 34.19 3.33
4879 5215 2.554272 CCGCGTACCAAGCAACAC 59.446 61.111 4.92 0.00 34.19 3.32
4880 5216 2.554272 CGCGTACCAAGCAACACC 59.446 61.111 0.00 0.00 34.19 4.16
4881 5217 1.959226 CGCGTACCAAGCAACACCT 60.959 57.895 0.00 0.00 34.19 4.00
4882 5218 1.503818 CGCGTACCAAGCAACACCTT 61.504 55.000 0.00 0.00 34.19 3.50
4883 5219 0.237498 GCGTACCAAGCAACACCTTC 59.763 55.000 0.00 0.00 34.19 3.46
4884 5220 1.588674 CGTACCAAGCAACACCTTCA 58.411 50.000 0.00 0.00 0.00 3.02
4885 5221 1.944024 CGTACCAAGCAACACCTTCAA 59.056 47.619 0.00 0.00 0.00 2.69
4886 5222 2.032030 CGTACCAAGCAACACCTTCAAG 60.032 50.000 0.00 0.00 0.00 3.02
4887 5223 2.435372 ACCAAGCAACACCTTCAAGA 57.565 45.000 0.00 0.00 0.00 3.02
4888 5224 2.733956 ACCAAGCAACACCTTCAAGAA 58.266 42.857 0.00 0.00 0.00 2.52
4889 5225 2.689983 ACCAAGCAACACCTTCAAGAAG 59.310 45.455 2.83 2.83 38.14 2.85
4898 5234 2.743195 CTTCAAGAAGGAGGCGACG 58.257 57.895 1.86 0.00 34.87 5.12
4899 5235 0.243907 CTTCAAGAAGGAGGCGACGA 59.756 55.000 0.00 0.00 34.87 4.20
4900 5236 0.038526 TTCAAGAAGGAGGCGACGAC 60.039 55.000 0.00 0.00 0.00 4.34
4901 5237 1.801913 CAAGAAGGAGGCGACGACG 60.802 63.158 2.12 2.12 42.93 5.12
4923 5259 4.880537 CGCTGCTGCCCGGACTAG 62.881 72.222 0.73 0.00 35.36 2.57
4924 5260 3.775654 GCTGCTGCCCGGACTAGT 61.776 66.667 0.73 0.00 0.00 2.57
4925 5261 2.496817 CTGCTGCCCGGACTAGTC 59.503 66.667 14.87 14.87 0.00 2.59
4926 5262 3.075005 TGCTGCCCGGACTAGTCC 61.075 66.667 29.18 29.18 46.18 3.85
4931 5267 1.531128 GCCCGGACTAGTCCTAGGG 60.531 68.421 34.59 34.59 46.90 3.53
4932 5268 2.295557 GCCCGGACTAGTCCTAGGGT 62.296 65.000 36.45 0.00 46.28 4.34
4933 5269 3.774769 GCCCGGACTAGTCCTAGGGTT 62.775 61.905 36.45 0.00 46.28 4.11
4937 5273 2.396608 GGACTAGTCCTAGGGTTTCCC 58.603 57.143 31.12 3.92 46.16 3.97
4969 5305 3.721706 GCAGTGAGGGGAGGGGTG 61.722 72.222 0.00 0.00 0.00 4.61
4970 5306 2.203998 CAGTGAGGGGAGGGGTGT 60.204 66.667 0.00 0.00 0.00 4.16
4971 5307 1.080354 CAGTGAGGGGAGGGGTGTA 59.920 63.158 0.00 0.00 0.00 2.90
4972 5308 1.080538 AGTGAGGGGAGGGGTGTAC 59.919 63.158 0.00 0.00 0.00 2.90
4973 5309 1.993948 GTGAGGGGAGGGGTGTACC 60.994 68.421 0.00 0.00 39.11 3.34
4984 5320 2.125793 GTGTACCCGACGCCCTTC 60.126 66.667 0.00 0.00 31.94 3.46
4985 5321 2.601067 TGTACCCGACGCCCTTCA 60.601 61.111 0.00 0.00 0.00 3.02
4986 5322 2.183555 GTACCCGACGCCCTTCAG 59.816 66.667 0.00 0.00 0.00 3.02
4987 5323 3.072468 TACCCGACGCCCTTCAGG 61.072 66.667 0.00 0.00 39.47 3.86
4988 5324 3.588817 TACCCGACGCCCTTCAGGA 62.589 63.158 0.00 0.00 38.24 3.86
4989 5325 3.702048 CCCGACGCCCTTCAGGAA 61.702 66.667 0.00 0.00 38.24 3.36
4990 5326 2.125512 CCGACGCCCTTCAGGAAG 60.126 66.667 2.01 2.01 38.24 3.46
4998 5334 2.125512 CTTCAGGAAGGTCCGGCG 60.126 66.667 0.00 0.00 42.75 6.46
4999 5335 3.665675 CTTCAGGAAGGTCCGGCGG 62.666 68.421 22.51 22.51 42.75 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.271656 CGATCCCCTATCCGTGGTAAC 59.728 57.143 0.00 0.00 0.00 2.50
7 8 1.624336 CGATCCCCTATCCGTGGTAA 58.376 55.000 0.00 0.00 0.00 2.85
8 9 0.251474 CCGATCCCCTATCCGTGGTA 60.251 60.000 0.00 0.00 0.00 3.25
9 10 1.533273 CCGATCCCCTATCCGTGGT 60.533 63.158 0.00 0.00 0.00 4.16
10 11 2.943978 GCCGATCCCCTATCCGTGG 61.944 68.421 0.00 0.00 0.00 4.94
11 12 0.611062 TAGCCGATCCCCTATCCGTG 60.611 60.000 0.00 0.00 0.00 4.94
12 13 0.323542 CTAGCCGATCCCCTATCCGT 60.324 60.000 0.00 0.00 0.00 4.69
13 14 1.038130 CCTAGCCGATCCCCTATCCG 61.038 65.000 0.00 0.00 0.00 4.18
14 15 0.041386 ACCTAGCCGATCCCCTATCC 59.959 60.000 0.00 0.00 0.00 2.59
15 16 1.187087 CACCTAGCCGATCCCCTATC 58.813 60.000 0.00 0.00 0.00 2.08
16 17 0.487772 ACACCTAGCCGATCCCCTAT 59.512 55.000 0.00 0.00 0.00 2.57
17 18 0.178970 GACACCTAGCCGATCCCCTA 60.179 60.000 0.00 0.00 0.00 3.53
18 19 1.457831 GACACCTAGCCGATCCCCT 60.458 63.158 0.00 0.00 0.00 4.79
19 20 2.857744 CGACACCTAGCCGATCCCC 61.858 68.421 0.00 0.00 0.00 4.81
20 21 2.728817 CGACACCTAGCCGATCCC 59.271 66.667 0.00 0.00 0.00 3.85
21 22 2.728817 CCGACACCTAGCCGATCC 59.271 66.667 0.00 0.00 0.00 3.36
22 23 1.673808 AACCCGACACCTAGCCGATC 61.674 60.000 0.00 0.00 0.00 3.69
23 24 1.262640 AAACCCGACACCTAGCCGAT 61.263 55.000 0.00 0.00 0.00 4.18
24 25 1.474332 AAAACCCGACACCTAGCCGA 61.474 55.000 0.00 0.00 0.00 5.54
25 26 0.604511 AAAAACCCGACACCTAGCCG 60.605 55.000 0.00 0.00 0.00 5.52
26 27 3.334413 AAAAACCCGACACCTAGCC 57.666 52.632 0.00 0.00 0.00 3.93
181 183 2.919856 CGAGGGAGGGGCGATGAT 60.920 66.667 0.00 0.00 0.00 2.45
248 250 2.490168 GGCTGGTTCTTTGGGACCTTAA 60.490 50.000 0.00 0.00 0.00 1.85
259 261 0.538287 GTTCTGCTGGGCTGGTTCTT 60.538 55.000 0.00 0.00 0.00 2.52
269 271 2.949106 CGGTTGCTGTTCTGCTGG 59.051 61.111 3.65 0.00 0.00 4.85
350 352 1.179152 TTGCTCGGATCTGGTCGTAA 58.821 50.000 0.62 0.00 0.00 3.18
402 404 0.958382 TAGCATTTGGGCGTGTGGAC 60.958 55.000 0.00 0.00 39.27 4.02
463 471 2.735772 GGCGGCTCCCTGAAGATGA 61.736 63.158 0.00 0.00 0.00 2.92
485 493 2.165437 GTCCTGCTCAGAAAGACGAGAT 59.835 50.000 0.00 0.00 0.00 2.75
513 521 9.621629 TTAGATGTTCCTTCAACTTTTGTTAGA 57.378 29.630 0.00 0.00 41.35 2.10
530 538 2.007608 GGGCTCCGTGTTTAGATGTTC 58.992 52.381 0.00 0.00 0.00 3.18
588 596 3.412386 AGTAGCTTTGCTTGTTAGGTGG 58.588 45.455 0.00 0.00 40.44 4.61
621 629 0.458669 CCGGCCGTACTGACATAACT 59.541 55.000 26.12 0.00 0.00 2.24
622 630 0.174162 ACCGGCCGTACTGACATAAC 59.826 55.000 26.12 0.00 0.00 1.89
624 632 0.457035 GAACCGGCCGTACTGACATA 59.543 55.000 26.12 0.00 0.00 2.29
625 633 1.217244 GAACCGGCCGTACTGACAT 59.783 57.895 26.12 0.00 0.00 3.06
640 648 2.147150 GAAGTGCTGGAAGTCTGGAAC 58.853 52.381 0.00 0.00 35.30 3.62
718 733 5.070981 TCCAAGATCTAAGATCTTCGGCAAT 59.929 40.000 12.24 0.00 36.32 3.56
726 741 8.780616 TTGAGAAGATCCAAGATCTAAGATCT 57.219 34.615 22.80 22.80 45.68 2.75
727 742 8.090214 CCTTGAGAAGATCCAAGATCTAAGATC 58.910 40.741 20.04 20.04 41.56 2.75
728 743 7.473228 GCCTTGAGAAGATCCAAGATCTAAGAT 60.473 40.741 7.50 7.04 41.56 2.40
729 744 6.183360 GCCTTGAGAAGATCCAAGATCTAAGA 60.183 42.308 7.50 0.00 41.56 2.10
730 745 5.990996 GCCTTGAGAAGATCCAAGATCTAAG 59.009 44.000 7.50 7.47 41.56 2.18
731 746 5.163258 GGCCTTGAGAAGATCCAAGATCTAA 60.163 44.000 7.50 0.00 41.56 2.10
786 801 2.852075 TGAACCCCCTGCGGTCTT 60.852 61.111 0.00 0.00 33.98 3.01
812 827 4.440127 CCTGGCAATTGGCACCGC 62.440 66.667 29.00 2.36 46.12 5.68
1042 1061 4.162690 CAGGTAGTGGGGCGGCTC 62.163 72.222 9.56 4.97 0.00 4.70
1322 1341 2.607892 GGTGCAGCAGTCAACGACC 61.608 63.158 11.86 0.00 32.18 4.79
1339 1362 2.224523 TGGCCGGATTCAATTAGCTAGG 60.225 50.000 5.05 0.00 0.00 3.02
1378 1401 6.496338 AGTAAGGCCGAAAAATAGAAACAG 57.504 37.500 0.00 0.00 0.00 3.16
1408 1431 8.603242 TTATTAGTTGGTGTCAAAGAAGAGAC 57.397 34.615 0.00 0.00 34.28 3.36
1559 1587 7.861630 ACACATATTATTTCAATAGTGACCGC 58.138 34.615 0.00 0.00 31.90 5.68
1602 1630 6.182039 ACGTCAATCCAACAACATAGATTG 57.818 37.500 5.44 5.44 44.44 2.67
1603 1631 5.063438 CGACGTCAATCCAACAACATAGATT 59.937 40.000 17.16 0.00 0.00 2.40
1604 1632 4.566759 CGACGTCAATCCAACAACATAGAT 59.433 41.667 17.16 0.00 0.00 1.98
1605 1633 3.924073 CGACGTCAATCCAACAACATAGA 59.076 43.478 17.16 0.00 0.00 1.98
1606 1634 3.924073 TCGACGTCAATCCAACAACATAG 59.076 43.478 17.16 0.00 0.00 2.23
1607 1635 3.915536 TCGACGTCAATCCAACAACATA 58.084 40.909 17.16 0.00 0.00 2.29
1608 1636 2.736721 CTCGACGTCAATCCAACAACAT 59.263 45.455 17.16 0.00 0.00 2.71
1638 1666 4.654091 ACAAGACCCAAAAAGACACATG 57.346 40.909 0.00 0.00 0.00 3.21
1680 1708 5.163854 CCTTGACAAGTAATGAATCGGTCAC 60.164 44.000 14.03 0.00 39.72 3.67
1681 1709 4.935205 CCTTGACAAGTAATGAATCGGTCA 59.065 41.667 14.03 0.00 41.67 4.02
1684 1712 3.689161 TGCCTTGACAAGTAATGAATCGG 59.311 43.478 14.03 0.00 0.00 4.18
1686 1714 5.886960 ACTGCCTTGACAAGTAATGAATC 57.113 39.130 14.03 0.00 0.00 2.52
1690 1718 8.492673 TCTTTATACTGCCTTGACAAGTAATG 57.507 34.615 14.03 7.28 0.00 1.90
1695 1723 6.428159 AGTGTTCTTTATACTGCCTTGACAAG 59.572 38.462 8.31 8.31 0.00 3.16
1696 1724 6.296026 AGTGTTCTTTATACTGCCTTGACAA 58.704 36.000 0.00 0.00 0.00 3.18
1722 1750 7.659186 ACGGATCAGGATGTACTTTATACTTC 58.341 38.462 0.00 0.00 37.40 3.01
1728 1756 8.790718 GTTATCTACGGATCAGGATGTACTTTA 58.209 37.037 0.00 0.00 37.40 1.85
1735 1763 6.622549 GTTAGGTTATCTACGGATCAGGATG 58.377 44.000 0.00 0.00 33.71 3.51
1739 1767 5.936686 TCGTTAGGTTATCTACGGATCAG 57.063 43.478 0.00 0.00 33.71 2.90
1740 1768 5.999600 TCATCGTTAGGTTATCTACGGATCA 59.000 40.000 0.00 0.00 33.71 2.92
1742 1770 7.463961 AATCATCGTTAGGTTATCTACGGAT 57.536 36.000 0.00 0.00 36.07 4.18
1743 1771 6.889301 AATCATCGTTAGGTTATCTACGGA 57.111 37.500 0.00 0.00 0.00 4.69
1744 1772 7.814642 ACTAATCATCGTTAGGTTATCTACGG 58.185 38.462 0.00 0.00 36.27 4.02
1745 1773 9.752274 GTACTAATCATCGTTAGGTTATCTACG 57.248 37.037 0.00 0.00 36.27 3.51
1790 1835 7.202158 GGTGGTCTACATACCTGGGTATAATTT 60.202 40.741 11.42 1.26 39.07 1.82
1796 1841 2.588720 AGGTGGTCTACATACCTGGGTA 59.411 50.000 1.70 1.70 42.95 3.69
1798 1843 2.176247 AGGTGGTCTACATACCTGGG 57.824 55.000 0.00 0.00 42.95 4.45
1805 1850 2.165845 GTCGTTGCTAGGTGGTCTACAT 59.834 50.000 0.00 0.00 0.00 2.29
1806 1851 1.542915 GTCGTTGCTAGGTGGTCTACA 59.457 52.381 0.00 0.00 0.00 2.74
1847 1892 9.798994 GTCGATCCAATACTTAGAGAAACTAAA 57.201 33.333 0.00 0.00 40.07 1.85
1848 1893 8.963725 TGTCGATCCAATACTTAGAGAAACTAA 58.036 33.333 0.00 0.00 38.56 2.24
1849 1894 8.515695 TGTCGATCCAATACTTAGAGAAACTA 57.484 34.615 0.00 0.00 0.00 2.24
1850 1895 7.339721 TCTGTCGATCCAATACTTAGAGAAACT 59.660 37.037 0.00 0.00 0.00 2.66
1851 1896 7.481642 TCTGTCGATCCAATACTTAGAGAAAC 58.518 38.462 0.00 0.00 0.00 2.78
1852 1897 7.556635 TCTCTGTCGATCCAATACTTAGAGAAA 59.443 37.037 0.00 0.00 36.26 2.52
1853 1898 7.054751 TCTCTGTCGATCCAATACTTAGAGAA 58.945 38.462 0.00 0.00 36.26 2.87
1854 1899 6.592870 TCTCTGTCGATCCAATACTTAGAGA 58.407 40.000 0.00 0.00 36.69 3.10
1855 1900 6.485313 ACTCTCTGTCGATCCAATACTTAGAG 59.515 42.308 0.00 0.00 33.09 2.43
1856 1901 6.261158 CACTCTCTGTCGATCCAATACTTAGA 59.739 42.308 0.00 0.00 0.00 2.10
1857 1902 6.261158 TCACTCTCTGTCGATCCAATACTTAG 59.739 42.308 0.00 0.00 0.00 2.18
1858 1903 6.120220 TCACTCTCTGTCGATCCAATACTTA 58.880 40.000 0.00 0.00 0.00 2.24
1859 1904 4.950475 TCACTCTCTGTCGATCCAATACTT 59.050 41.667 0.00 0.00 0.00 2.24
1860 1905 4.527944 TCACTCTCTGTCGATCCAATACT 58.472 43.478 0.00 0.00 0.00 2.12
1861 1906 4.902443 TCACTCTCTGTCGATCCAATAC 57.098 45.455 0.00 0.00 0.00 1.89
1862 1907 4.950475 ACTTCACTCTCTGTCGATCCAATA 59.050 41.667 0.00 0.00 0.00 1.90
1863 1908 3.766591 ACTTCACTCTCTGTCGATCCAAT 59.233 43.478 0.00 0.00 0.00 3.16
1864 1909 3.057245 CACTTCACTCTCTGTCGATCCAA 60.057 47.826 0.00 0.00 0.00 3.53
1865 1910 2.489722 CACTTCACTCTCTGTCGATCCA 59.510 50.000 0.00 0.00 0.00 3.41
1866 1911 2.490115 ACACTTCACTCTCTGTCGATCC 59.510 50.000 0.00 0.00 0.00 3.36
1867 1912 3.189495 TCACACTTCACTCTCTGTCGATC 59.811 47.826 0.00 0.00 0.00 3.69
1868 1913 3.149981 TCACACTTCACTCTCTGTCGAT 58.850 45.455 0.00 0.00 0.00 3.59
1869 1914 2.572290 TCACACTTCACTCTCTGTCGA 58.428 47.619 0.00 0.00 0.00 4.20
1870 1915 3.567576 ATCACACTTCACTCTCTGTCG 57.432 47.619 0.00 0.00 0.00 4.35
1871 1916 5.525378 ACAAAATCACACTTCACTCTCTGTC 59.475 40.000 0.00 0.00 0.00 3.51
1872 1917 5.431765 ACAAAATCACACTTCACTCTCTGT 58.568 37.500 0.00 0.00 0.00 3.41
1873 1918 5.049818 GGACAAAATCACACTTCACTCTCTG 60.050 44.000 0.00 0.00 0.00 3.35
1874 1919 5.059833 GGACAAAATCACACTTCACTCTCT 58.940 41.667 0.00 0.00 0.00 3.10
1875 1920 4.214332 GGGACAAAATCACACTTCACTCTC 59.786 45.833 0.00 0.00 0.00 3.20
1876 1921 4.137543 GGGACAAAATCACACTTCACTCT 58.862 43.478 0.00 0.00 0.00 3.24
1877 1922 3.882888 TGGGACAAAATCACACTTCACTC 59.117 43.478 0.00 0.00 35.05 3.51
1878 1923 3.897239 TGGGACAAAATCACACTTCACT 58.103 40.909 0.00 0.00 35.05 3.41
1910 2007 5.733620 TCAACAGTTCTTATAAGTCCGGT 57.266 39.130 12.19 7.92 0.00 5.28
1955 2052 4.494199 GGCACGGTAGAATTCATTTTCTCG 60.494 45.833 8.44 4.36 37.20 4.04
1983 2080 3.181454 ACGGTTGAAGGTGGATCCATATC 60.181 47.826 19.62 16.29 39.02 1.63
1997 2094 1.028905 CCCAAGAGCAAACGGTTGAA 58.971 50.000 19.48 0.00 36.83 2.69
2013 2110 1.982660 TAAAACATGGCACGAACCCA 58.017 45.000 0.00 0.00 36.66 4.51
2056 2153 9.868160 AAAAGATTCCCTAAGAAAGAAGAAGAA 57.132 29.630 0.00 0.00 38.21 2.52
2120 2310 6.889301 AAGTATATCATAGGGTTTCGTCGA 57.111 37.500 0.00 0.00 0.00 4.20
2121 2311 7.941795 AAAAGTATATCATAGGGTTTCGTCG 57.058 36.000 0.00 0.00 0.00 5.12
2200 2390 7.272978 GTTCATGCTACTCCTTTAGTATTGGA 58.727 38.462 0.00 0.00 39.96 3.53
2207 2397 5.127845 TCTGAGGTTCATGCTACTCCTTTAG 59.872 44.000 7.56 0.00 0.00 1.85
2210 2400 3.445008 TCTGAGGTTCATGCTACTCCTT 58.555 45.455 7.56 0.00 0.00 3.36
2211 2401 3.030291 CTCTGAGGTTCATGCTACTCCT 58.970 50.000 0.00 0.00 0.00 3.69
2212 2402 2.763448 ACTCTGAGGTTCATGCTACTCC 59.237 50.000 9.85 0.00 0.00 3.85
2213 2403 4.642885 ACTACTCTGAGGTTCATGCTACTC 59.357 45.833 9.85 0.00 0.00 2.59
2214 2404 4.400884 CACTACTCTGAGGTTCATGCTACT 59.599 45.833 9.85 0.00 0.00 2.57
2215 2405 4.399618 TCACTACTCTGAGGTTCATGCTAC 59.600 45.833 9.85 0.00 0.00 3.58
2216 2406 4.600062 TCACTACTCTGAGGTTCATGCTA 58.400 43.478 9.85 0.00 0.00 3.49
2219 2409 4.403752 TCCATCACTACTCTGAGGTTCATG 59.596 45.833 9.85 4.62 0.00 3.07
2226 2416 4.498850 CCAATCGTCCATCACTACTCTGAG 60.499 50.000 2.45 2.45 0.00 3.35
2228 2418 3.381590 TCCAATCGTCCATCACTACTCTG 59.618 47.826 0.00 0.00 0.00 3.35
2256 2446 2.293955 TCATGCATGCAATATTCCGTGG 59.706 45.455 26.68 4.44 0.00 4.94
2302 2493 6.529463 GCAAACAGCATTTTGTAGTCAAAT 57.471 33.333 10.66 0.00 41.88 2.32
2327 2520 3.266510 TGTTCACTTCAGCTGTTCTGT 57.733 42.857 14.67 5.78 43.32 3.41
2354 2547 5.993106 AGAACAGTAAAAGACAACTCAGC 57.007 39.130 0.00 0.00 0.00 4.26
2355 2548 7.905493 GTCAAAGAACAGTAAAAGACAACTCAG 59.095 37.037 0.00 0.00 0.00 3.35
2400 2593 2.032799 CGCTCTAGCTACTTGGTCTCTG 59.967 54.545 0.00 0.00 39.32 3.35
2420 2616 1.226746 GGGTTTTGGTCAGAGTGTCG 58.773 55.000 0.00 0.00 0.00 4.35
2591 2801 0.819582 CATTGTCAGGGGCATGTTCC 59.180 55.000 0.00 0.00 0.00 3.62
2606 2816 2.401766 GGGTCCGTGCTCTGCATTG 61.402 63.158 0.00 0.00 41.91 2.82
2732 2942 3.263503 CTCGACGCGGTTCTGGTCA 62.264 63.158 12.47 0.00 0.00 4.02
3096 3306 2.649034 GTTGCTGTCGAGGTCGGA 59.351 61.111 0.00 0.00 40.29 4.55
3097 3307 2.805353 CGTTGCTGTCGAGGTCGG 60.805 66.667 0.00 0.00 40.29 4.79
3143 3353 3.740397 CCGTCGCCGTACTGGACA 61.740 66.667 7.77 0.00 42.00 4.02
3228 3438 0.886563 GCACGTGTAGACTAGTGGGT 59.113 55.000 18.38 0.00 35.35 4.51
3232 3442 1.239296 TGGCGCACGTGTAGACTAGT 61.239 55.000 18.38 0.00 0.00 2.57
3534 3744 1.079819 CTTGTCGGTGAGCATCGGT 60.080 57.895 3.06 0.00 38.61 4.69
4020 4230 0.917533 AGGAGCCTGTCAATCAGCAT 59.082 50.000 0.00 0.00 42.38 3.79
4050 4260 5.036117 TGGTGGATGAAGCCTAGTTATTC 57.964 43.478 0.00 0.00 0.00 1.75
4102 4312 9.929180 ACGCATTTCTCACATATATATGTAACT 57.071 29.630 24.50 10.00 44.57 2.24
4168 4388 5.297029 ACCACTTCTCTGTTTCTTTACTTGC 59.703 40.000 0.00 0.00 0.00 4.01
4201 4447 5.904984 ACCAAATATGCCCTCTGTGTATA 57.095 39.130 0.00 0.00 0.00 1.47
4209 4455 1.410153 CAGCCAACCAAATATGCCCTC 59.590 52.381 0.00 0.00 0.00 4.30
4214 4460 1.410153 GAGCCCAGCCAACCAAATATG 59.590 52.381 0.00 0.00 0.00 1.78
4226 4472 0.533951 CAAATTTGAGGGAGCCCAGC 59.466 55.000 13.08 0.00 38.92 4.85
4234 4480 5.299148 TGCTTTGACAATCAAATTTGAGGG 58.701 37.500 24.17 19.79 44.37 4.30
4236 4482 5.107220 GGCTGCTTTGACAATCAAATTTGAG 60.107 40.000 24.17 14.88 44.37 3.02
4239 4485 4.067192 GGGCTGCTTTGACAATCAAATTT 58.933 39.130 4.55 0.00 44.37 1.82
4244 4490 1.538047 GAGGGCTGCTTTGACAATCA 58.462 50.000 0.00 0.00 0.00 2.57
4246 4492 0.962356 CCGAGGGCTGCTTTGACAAT 60.962 55.000 0.00 0.00 0.00 2.71
4251 4508 2.037136 CAGACCGAGGGCTGCTTTG 61.037 63.158 12.63 0.00 0.00 2.77
4266 4523 0.541998 TCCGGTTCTTCTCAGCCAGA 60.542 55.000 0.00 0.00 0.00 3.86
4271 4528 3.119291 CGATTCATCCGGTTCTTCTCAG 58.881 50.000 0.00 0.00 0.00 3.35
4282 4539 0.593128 GGAAATGGCCGATTCATCCG 59.407 55.000 18.73 0.00 0.00 4.18
4285 4542 2.301346 GTGAGGAAATGGCCGATTCAT 58.699 47.619 18.73 13.50 0.00 2.57
4295 4552 2.354259 GAGTCTGGCTGTGAGGAAATG 58.646 52.381 0.00 0.00 0.00 2.32
4296 4553 1.280421 GGAGTCTGGCTGTGAGGAAAT 59.720 52.381 0.00 0.00 0.00 2.17
4340 4648 3.959975 GCTTCCCAACGCGTGCAA 61.960 61.111 14.98 2.09 0.00 4.08
4373 4681 4.081309 TGGAATAGGGAGTTAACACCGAAG 60.081 45.833 14.85 0.00 0.00 3.79
4401 4709 7.445121 AGAGAACATGTGTTTGAGTGATAAGA 58.555 34.615 0.00 0.00 38.56 2.10
4416 4724 0.179000 GGGATGGCGAGAGAACATGT 59.821 55.000 0.00 0.00 31.77 3.21
4426 4734 2.435938 GCAACGAAGGGATGGCGA 60.436 61.111 0.00 0.00 0.00 5.54
4428 4736 1.754234 ATGGCAACGAAGGGATGGC 60.754 57.895 0.00 0.00 42.51 4.40
4454 4776 1.402968 CAAGGATTTGGAGGCACGATG 59.597 52.381 0.00 0.00 0.00 3.84
4457 4779 1.508088 GCAAGGATTTGGAGGCACG 59.492 57.895 0.00 0.00 34.79 5.34
4479 4801 1.945354 GCTGGCGAGCCACTAGTGTA 61.945 60.000 21.18 0.00 41.89 2.90
4480 4802 2.973899 CTGGCGAGCCACTAGTGT 59.026 61.111 21.18 3.76 41.89 3.55
4481 4803 2.510238 GCTGGCGAGCCACTAGTG 60.510 66.667 16.34 16.34 41.89 2.74
4482 4804 4.135153 CGCTGGCGAGCCACTAGT 62.135 66.667 15.60 0.00 42.91 2.57
4483 4805 3.649277 AACGCTGGCGAGCCACTAG 62.649 63.158 21.77 9.59 42.91 2.57
4484 4806 3.691342 AACGCTGGCGAGCCACTA 61.691 61.111 21.77 0.00 42.91 2.74
4516 4852 1.957877 CTCTCCAAGTCCTCGGGTATC 59.042 57.143 0.00 0.00 0.00 2.24
4553 4889 4.410400 CCGAGTGTGGAAGGGGGC 62.410 72.222 0.00 0.00 0.00 5.80
4628 4964 1.445716 CGCCGGATCGTAGAAGTCCT 61.446 60.000 5.05 0.00 43.58 3.85
4638 4974 3.515316 ATAAGTGCCCGCCGGATCG 62.515 63.158 5.05 0.00 0.00 3.69
4640 4976 1.978455 TTCATAAGTGCCCGCCGGAT 61.978 55.000 5.05 0.00 0.00 4.18
4644 4980 1.135112 CCTTTTTCATAAGTGCCCGCC 60.135 52.381 0.00 0.00 0.00 6.13
4645 4981 1.544246 ACCTTTTTCATAAGTGCCCGC 59.456 47.619 0.00 0.00 0.00 6.13
4646 4982 3.366985 GGAACCTTTTTCATAAGTGCCCG 60.367 47.826 0.00 0.00 0.00 6.13
4647 4983 4.188247 GGAACCTTTTTCATAAGTGCCC 57.812 45.455 0.00 0.00 0.00 5.36
4658 4994 9.041572 TTGTAATACAAAGCGGGGAACCTTTTT 62.042 37.037 2.97 0.00 41.74 1.94
4659 4995 7.644363 TTGTAATACAAAGCGGGGAACCTTTT 61.644 38.462 2.97 0.00 41.74 2.27
4660 4996 6.215305 TTGTAATACAAAGCGGGGAACCTTT 61.215 40.000 2.97 0.00 41.74 3.11
4661 4997 4.750406 TTGTAATACAAAGCGGGGAACCTT 60.750 41.667 2.97 0.00 41.74 3.50
4662 4998 3.244981 TTGTAATACAAAGCGGGGAACCT 60.245 43.478 2.97 0.00 41.74 3.50
4663 4999 3.083293 TTGTAATACAAAGCGGGGAACC 58.917 45.455 2.97 0.00 41.43 3.62
4664 5000 4.769859 TTTGTAATACAAAGCGGGGAAC 57.230 40.909 13.93 0.00 42.55 3.62
4673 5009 6.561737 TCGATGGTTGCTTTGTAATACAAA 57.438 33.333 16.57 16.57 44.91 2.83
4674 5010 6.751514 ATCGATGGTTGCTTTGTAATACAA 57.248 33.333 1.08 1.08 36.11 2.41
4675 5011 6.819146 TGTATCGATGGTTGCTTTGTAATACA 59.181 34.615 8.54 0.00 0.00 2.29
4676 5012 7.241663 TGTATCGATGGTTGCTTTGTAATAC 57.758 36.000 8.54 0.00 0.00 1.89
4677 5013 7.172532 GGATGTATCGATGGTTGCTTTGTAATA 59.827 37.037 8.54 0.00 0.00 0.98
4678 5014 6.017109 GGATGTATCGATGGTTGCTTTGTAAT 60.017 38.462 8.54 0.00 0.00 1.89
4679 5015 5.295787 GGATGTATCGATGGTTGCTTTGTAA 59.704 40.000 8.54 0.00 0.00 2.41
4680 5016 4.814234 GGATGTATCGATGGTTGCTTTGTA 59.186 41.667 8.54 0.00 0.00 2.41
4681 5017 3.627577 GGATGTATCGATGGTTGCTTTGT 59.372 43.478 8.54 0.00 0.00 2.83
4682 5018 3.627123 TGGATGTATCGATGGTTGCTTTG 59.373 43.478 8.54 0.00 0.00 2.77
4683 5019 3.884895 TGGATGTATCGATGGTTGCTTT 58.115 40.909 8.54 0.00 0.00 3.51
4684 5020 3.558931 TGGATGTATCGATGGTTGCTT 57.441 42.857 8.54 0.00 0.00 3.91
4685 5021 3.558931 TTGGATGTATCGATGGTTGCT 57.441 42.857 8.54 0.00 0.00 3.91
4686 5022 3.814842 TCATTGGATGTATCGATGGTTGC 59.185 43.478 8.54 0.00 0.00 4.17
4687 5023 6.314648 CCTATCATTGGATGTATCGATGGTTG 59.685 42.308 8.54 0.00 34.89 3.77
4688 5024 6.013379 ACCTATCATTGGATGTATCGATGGTT 60.013 38.462 8.54 0.00 34.89 3.67
4689 5025 5.485353 ACCTATCATTGGATGTATCGATGGT 59.515 40.000 8.54 0.00 34.89 3.55
4690 5026 5.814188 CACCTATCATTGGATGTATCGATGG 59.186 44.000 8.54 0.00 34.89 3.51
4691 5027 5.292834 GCACCTATCATTGGATGTATCGATG 59.707 44.000 8.54 0.00 34.89 3.84
4692 5028 5.188555 AGCACCTATCATTGGATGTATCGAT 59.811 40.000 2.16 2.16 34.89 3.59
4693 5029 4.528206 AGCACCTATCATTGGATGTATCGA 59.472 41.667 0.00 0.00 34.89 3.59
4694 5030 4.628766 CAGCACCTATCATTGGATGTATCG 59.371 45.833 0.00 0.00 34.89 2.92
4695 5031 4.940046 CCAGCACCTATCATTGGATGTATC 59.060 45.833 0.00 0.00 34.89 2.24
4696 5032 4.263639 CCCAGCACCTATCATTGGATGTAT 60.264 45.833 0.00 0.00 34.89 2.29
4697 5033 3.072915 CCCAGCACCTATCATTGGATGTA 59.927 47.826 0.00 0.00 34.89 2.29
4698 5034 2.158564 CCCAGCACCTATCATTGGATGT 60.159 50.000 0.00 0.00 34.89 3.06
4699 5035 2.511659 CCCAGCACCTATCATTGGATG 58.488 52.381 0.00 0.00 34.89 3.51
4700 5036 1.426598 CCCCAGCACCTATCATTGGAT 59.573 52.381 0.00 0.00 37.55 3.41
4701 5037 0.846015 CCCCAGCACCTATCATTGGA 59.154 55.000 0.00 0.00 0.00 3.53
4702 5038 0.825010 GCCCCAGCACCTATCATTGG 60.825 60.000 0.00 0.00 39.53 3.16
4703 5039 0.825010 GGCCCCAGCACCTATCATTG 60.825 60.000 0.00 0.00 42.56 2.82
4704 5040 1.538666 GGCCCCAGCACCTATCATT 59.461 57.895 0.00 0.00 42.56 2.57
4705 5041 2.822637 CGGCCCCAGCACCTATCAT 61.823 63.158 0.00 0.00 42.56 2.45
4706 5042 3.479203 CGGCCCCAGCACCTATCA 61.479 66.667 0.00 0.00 42.56 2.15
4707 5043 4.937431 GCGGCCCCAGCACCTATC 62.937 72.222 0.00 0.00 42.56 2.08
4718 5054 3.846602 CTTGTTTGTGCTGCGGCCC 62.847 63.158 16.57 3.34 37.74 5.80
4719 5055 2.355009 CTTGTTTGTGCTGCGGCC 60.355 61.111 16.57 7.08 37.74 6.13
4720 5056 3.032033 GCTTGTTTGTGCTGCGGC 61.032 61.111 11.65 11.65 39.26 6.53
4721 5057 1.370900 GAGCTTGTTTGTGCTGCGG 60.371 57.895 0.00 0.00 39.91 5.69
4722 5058 0.248580 TTGAGCTTGTTTGTGCTGCG 60.249 50.000 0.00 0.00 39.91 5.18
4723 5059 1.925229 TTTGAGCTTGTTTGTGCTGC 58.075 45.000 0.00 0.00 39.91 5.25
4742 5078 9.424319 GTTTCTCTTCCTTTCTTCTTTGTTTTT 57.576 29.630 0.00 0.00 0.00 1.94
4743 5079 8.585018 TGTTTCTCTTCCTTTCTTCTTTGTTTT 58.415 29.630 0.00 0.00 0.00 2.43
4744 5080 8.122472 TGTTTCTCTTCCTTTCTTCTTTGTTT 57.878 30.769 0.00 0.00 0.00 2.83
4745 5081 7.703058 TGTTTCTCTTCCTTTCTTCTTTGTT 57.297 32.000 0.00 0.00 0.00 2.83
4746 5082 7.703058 TTGTTTCTCTTCCTTTCTTCTTTGT 57.297 32.000 0.00 0.00 0.00 2.83
4747 5083 9.028185 CATTTGTTTCTCTTCCTTTCTTCTTTG 57.972 33.333 0.00 0.00 0.00 2.77
4748 5084 7.708322 GCATTTGTTTCTCTTCCTTTCTTCTTT 59.292 33.333 0.00 0.00 0.00 2.52
4749 5085 7.205992 GCATTTGTTTCTCTTCCTTTCTTCTT 58.794 34.615 0.00 0.00 0.00 2.52
4750 5086 6.239148 GGCATTTGTTTCTCTTCCTTTCTTCT 60.239 38.462 0.00 0.00 0.00 2.85
4751 5087 5.923114 GGCATTTGTTTCTCTTCCTTTCTTC 59.077 40.000 0.00 0.00 0.00 2.87
4752 5088 5.363580 TGGCATTTGTTTCTCTTCCTTTCTT 59.636 36.000 0.00 0.00 0.00 2.52
4753 5089 4.895297 TGGCATTTGTTTCTCTTCCTTTCT 59.105 37.500 0.00 0.00 0.00 2.52
4754 5090 5.200368 TGGCATTTGTTTCTCTTCCTTTC 57.800 39.130 0.00 0.00 0.00 2.62
4755 5091 5.129320 AGTTGGCATTTGTTTCTCTTCCTTT 59.871 36.000 0.00 0.00 0.00 3.11
4756 5092 4.651045 AGTTGGCATTTGTTTCTCTTCCTT 59.349 37.500 0.00 0.00 0.00 3.36
4757 5093 4.218312 AGTTGGCATTTGTTTCTCTTCCT 58.782 39.130 0.00 0.00 0.00 3.36
4758 5094 4.590850 AGTTGGCATTTGTTTCTCTTCC 57.409 40.909 0.00 0.00 0.00 3.46
4759 5095 5.147162 CGTAGTTGGCATTTGTTTCTCTTC 58.853 41.667 0.00 0.00 0.00 2.87
4760 5096 4.023193 CCGTAGTTGGCATTTGTTTCTCTT 60.023 41.667 0.00 0.00 0.00 2.85
4761 5097 3.502211 CCGTAGTTGGCATTTGTTTCTCT 59.498 43.478 0.00 0.00 0.00 3.10
4762 5098 3.500680 TCCGTAGTTGGCATTTGTTTCTC 59.499 43.478 0.00 0.00 0.00 2.87
4763 5099 3.482436 TCCGTAGTTGGCATTTGTTTCT 58.518 40.909 0.00 0.00 0.00 2.52
4764 5100 3.907894 TCCGTAGTTGGCATTTGTTTC 57.092 42.857 0.00 0.00 0.00 2.78
4765 5101 3.886505 TCTTCCGTAGTTGGCATTTGTTT 59.113 39.130 0.00 0.00 0.00 2.83
4766 5102 3.482436 TCTTCCGTAGTTGGCATTTGTT 58.518 40.909 0.00 0.00 0.00 2.83
4767 5103 3.134574 TCTTCCGTAGTTGGCATTTGT 57.865 42.857 0.00 0.00 0.00 2.83
4768 5104 3.242413 CGATCTTCCGTAGTTGGCATTTG 60.242 47.826 0.00 0.00 0.00 2.32
4769 5105 2.936498 CGATCTTCCGTAGTTGGCATTT 59.064 45.455 0.00 0.00 0.00 2.32
4770 5106 2.167693 TCGATCTTCCGTAGTTGGCATT 59.832 45.455 0.00 0.00 0.00 3.56
4771 5107 1.754803 TCGATCTTCCGTAGTTGGCAT 59.245 47.619 0.00 0.00 0.00 4.40
4772 5108 1.135199 GTCGATCTTCCGTAGTTGGCA 60.135 52.381 0.00 0.00 0.00 4.92
4773 5109 1.557651 GTCGATCTTCCGTAGTTGGC 58.442 55.000 0.00 0.00 0.00 4.52
4774 5110 1.399440 TCGTCGATCTTCCGTAGTTGG 59.601 52.381 0.00 0.00 0.00 3.77
4775 5111 2.819422 TCGTCGATCTTCCGTAGTTG 57.181 50.000 0.00 0.00 0.00 3.16
4776 5112 3.496155 GTTTCGTCGATCTTCCGTAGTT 58.504 45.455 0.00 0.00 0.00 2.24
4777 5113 2.475187 CGTTTCGTCGATCTTCCGTAGT 60.475 50.000 0.00 0.00 0.00 2.73
4778 5114 2.099621 CGTTTCGTCGATCTTCCGTAG 58.900 52.381 0.00 0.00 0.00 3.51
4779 5115 1.731709 TCGTTTCGTCGATCTTCCGTA 59.268 47.619 0.00 0.00 34.85 4.02
4780 5116 0.518636 TCGTTTCGTCGATCTTCCGT 59.481 50.000 0.00 0.00 34.85 4.69
4781 5117 1.578023 CTTCGTTTCGTCGATCTTCCG 59.422 52.381 0.00 0.00 39.57 4.30
4782 5118 2.860062 TCTTCGTTTCGTCGATCTTCC 58.140 47.619 0.00 0.00 39.57 3.46
4783 5119 4.028348 GTCATCTTCGTTTCGTCGATCTTC 60.028 45.833 0.00 0.00 39.57 2.87
4784 5120 3.852536 GTCATCTTCGTTTCGTCGATCTT 59.147 43.478 0.00 0.00 39.57 2.40
4785 5121 3.427243 GTCATCTTCGTTTCGTCGATCT 58.573 45.455 0.00 0.00 39.57 2.75
4786 5122 2.530700 GGTCATCTTCGTTTCGTCGATC 59.469 50.000 0.00 0.00 39.57 3.69
4787 5123 2.527100 GGTCATCTTCGTTTCGTCGAT 58.473 47.619 0.00 0.00 39.57 3.59
4788 5124 1.726892 CGGTCATCTTCGTTTCGTCGA 60.727 52.381 0.00 0.00 38.08 4.20
4789 5125 0.633733 CGGTCATCTTCGTTTCGTCG 59.366 55.000 0.00 0.00 0.00 5.12
4790 5126 0.989890 CCGGTCATCTTCGTTTCGTC 59.010 55.000 0.00 0.00 0.00 4.20
4791 5127 1.012486 GCCGGTCATCTTCGTTTCGT 61.012 55.000 1.90 0.00 0.00 3.85
4792 5128 1.708027 GCCGGTCATCTTCGTTTCG 59.292 57.895 1.90 0.00 0.00 3.46
4793 5129 0.734942 TCGCCGGTCATCTTCGTTTC 60.735 55.000 1.90 0.00 0.00 2.78
4794 5130 1.012486 GTCGCCGGTCATCTTCGTTT 61.012 55.000 1.90 0.00 0.00 3.60
4795 5131 1.445582 GTCGCCGGTCATCTTCGTT 60.446 57.895 1.90 0.00 0.00 3.85
4796 5132 2.181021 GTCGCCGGTCATCTTCGT 59.819 61.111 1.90 0.00 0.00 3.85
4797 5133 2.582498 GGTCGCCGGTCATCTTCG 60.582 66.667 1.90 0.00 0.00 3.79
4798 5134 2.582498 CGGTCGCCGGTCATCTTC 60.582 66.667 1.90 0.00 44.15 2.87
4808 5144 2.746277 AAGGATGCAACGGTCGCC 60.746 61.111 0.00 0.00 0.00 5.54
4809 5145 2.785258 GAAGGATGCAACGGTCGC 59.215 61.111 0.00 0.00 0.00 5.19
4810 5146 3.081133 CGAAGGATGCAACGGTCG 58.919 61.111 0.00 0.00 0.00 4.79
4823 5159 1.402456 CGTGGTGGTACTTCTCCGAAG 60.402 57.143 2.26 2.26 0.00 3.79
4824 5160 0.599558 CGTGGTGGTACTTCTCCGAA 59.400 55.000 0.00 0.00 0.00 4.30
4825 5161 0.538057 ACGTGGTGGTACTTCTCCGA 60.538 55.000 0.00 0.00 0.00 4.55
4826 5162 0.316204 AACGTGGTGGTACTTCTCCG 59.684 55.000 0.00 0.00 0.00 4.63
4827 5163 1.337541 GGAACGTGGTGGTACTTCTCC 60.338 57.143 0.00 0.00 0.00 3.71
4828 5164 1.337541 GGGAACGTGGTGGTACTTCTC 60.338 57.143 0.00 0.00 0.00 2.87
4829 5165 0.683412 GGGAACGTGGTGGTACTTCT 59.317 55.000 0.00 0.00 0.00 2.85
4830 5166 0.393820 TGGGAACGTGGTGGTACTTC 59.606 55.000 0.00 0.00 0.00 3.01
4831 5167 0.395312 CTGGGAACGTGGTGGTACTT 59.605 55.000 0.00 0.00 0.00 2.24
4832 5168 2.055299 CTGGGAACGTGGTGGTACT 58.945 57.895 0.00 0.00 0.00 2.73
4833 5169 1.670083 GCTGGGAACGTGGTGGTAC 60.670 63.158 0.00 0.00 0.00 3.34
4834 5170 2.141448 TGCTGGGAACGTGGTGGTA 61.141 57.895 0.00 0.00 0.00 3.25
4835 5171 3.484806 TGCTGGGAACGTGGTGGT 61.485 61.111 0.00 0.00 0.00 4.16
4836 5172 2.978010 GTGCTGGGAACGTGGTGG 60.978 66.667 0.00 0.00 0.00 4.61
4837 5173 2.978010 GGTGCTGGGAACGTGGTG 60.978 66.667 0.00 0.00 0.00 4.17
4838 5174 4.265056 GGGTGCTGGGAACGTGGT 62.265 66.667 0.00 0.00 0.00 4.16
4840 5176 3.818121 TTCGGGTGCTGGGAACGTG 62.818 63.158 0.00 0.00 0.00 4.49
4841 5177 3.530910 CTTCGGGTGCTGGGAACGT 62.531 63.158 0.00 0.00 0.00 3.99
4842 5178 2.742372 CTTCGGGTGCTGGGAACG 60.742 66.667 0.00 0.00 0.00 3.95
4843 5179 3.056328 GCTTCGGGTGCTGGGAAC 61.056 66.667 0.00 0.00 0.00 3.62
4844 5180 4.697756 CGCTTCGGGTGCTGGGAA 62.698 66.667 0.00 0.00 0.00 3.97
4856 5192 3.849953 CTTGGTACGCGGCGCTTC 61.850 66.667 30.54 18.39 0.00 3.86
4860 5196 4.439472 GTTGCTTGGTACGCGGCG 62.439 66.667 22.36 22.36 0.00 6.46
4861 5197 3.350612 TGTTGCTTGGTACGCGGC 61.351 61.111 12.47 2.91 0.00 6.53
4862 5198 2.554272 GTGTTGCTTGGTACGCGG 59.446 61.111 12.47 0.00 0.00 6.46
4863 5199 1.503818 AAGGTGTTGCTTGGTACGCG 61.504 55.000 3.53 3.53 0.00 6.01
4864 5200 0.237498 GAAGGTGTTGCTTGGTACGC 59.763 55.000 0.00 0.00 0.00 4.42
4865 5201 1.588674 TGAAGGTGTTGCTTGGTACG 58.411 50.000 0.00 0.00 0.00 3.67
4866 5202 3.211045 TCTTGAAGGTGTTGCTTGGTAC 58.789 45.455 0.00 0.00 0.00 3.34
4867 5203 3.569194 TCTTGAAGGTGTTGCTTGGTA 57.431 42.857 0.00 0.00 0.00 3.25
4868 5204 2.435372 TCTTGAAGGTGTTGCTTGGT 57.565 45.000 0.00 0.00 0.00 3.67
4869 5205 2.035066 CCTTCTTGAAGGTGTTGCTTGG 59.965 50.000 18.52 0.00 35.22 3.61
4870 5206 2.951642 TCCTTCTTGAAGGTGTTGCTTG 59.048 45.455 23.78 1.45 40.81 4.01
4871 5207 3.217626 CTCCTTCTTGAAGGTGTTGCTT 58.782 45.455 23.78 0.00 40.81 3.91
4872 5208 2.487986 CCTCCTTCTTGAAGGTGTTGCT 60.488 50.000 23.78 0.00 40.81 3.91
4873 5209 1.882623 CCTCCTTCTTGAAGGTGTTGC 59.117 52.381 23.78 0.00 40.81 4.17
4874 5210 1.882623 GCCTCCTTCTTGAAGGTGTTG 59.117 52.381 23.78 13.43 40.81 3.33
4875 5211 1.543429 CGCCTCCTTCTTGAAGGTGTT 60.543 52.381 23.78 0.00 40.81 3.32
4876 5212 0.035458 CGCCTCCTTCTTGAAGGTGT 59.965 55.000 23.78 0.00 40.81 4.16
4877 5213 0.321671 TCGCCTCCTTCTTGAAGGTG 59.678 55.000 23.78 21.33 40.81 4.00
4878 5214 0.321996 GTCGCCTCCTTCTTGAAGGT 59.678 55.000 23.78 0.00 40.81 3.50
4879 5215 0.737715 CGTCGCCTCCTTCTTGAAGG 60.738 60.000 20.21 20.21 41.35 3.46
4880 5216 0.243907 TCGTCGCCTCCTTCTTGAAG 59.756 55.000 3.55 3.55 0.00 3.02
4881 5217 0.038526 GTCGTCGCCTCCTTCTTGAA 60.039 55.000 0.00 0.00 0.00 2.69
4882 5218 1.585006 GTCGTCGCCTCCTTCTTGA 59.415 57.895 0.00 0.00 0.00 3.02
4883 5219 1.801913 CGTCGTCGCCTCCTTCTTG 60.802 63.158 0.00 0.00 0.00 3.02
4884 5220 2.567049 CGTCGTCGCCTCCTTCTT 59.433 61.111 0.00 0.00 0.00 2.52
4906 5242 4.880537 CTAGTCCGGGCAGCAGCG 62.881 72.222 9.71 0.00 43.41 5.18
4907 5243 3.724914 GACTAGTCCGGGCAGCAGC 62.725 68.421 9.71 0.00 41.10 5.25
4908 5244 2.496817 GACTAGTCCGGGCAGCAG 59.503 66.667 9.71 4.61 0.00 4.24
4909 5245 3.075005 GGACTAGTCCGGGCAGCA 61.075 66.667 25.83 0.00 40.36 4.41
4952 5288 3.721706 CACCCCTCCCCTCACTGC 61.722 72.222 0.00 0.00 0.00 4.40
4953 5289 1.080354 TACACCCCTCCCCTCACTG 59.920 63.158 0.00 0.00 0.00 3.66
4954 5290 1.080538 GTACACCCCTCCCCTCACT 59.919 63.158 0.00 0.00 0.00 3.41
4955 5291 1.993948 GGTACACCCCTCCCCTCAC 60.994 68.421 0.00 0.00 0.00 3.51
4956 5292 2.453054 GGTACACCCCTCCCCTCA 59.547 66.667 0.00 0.00 0.00 3.86
4966 5302 3.654173 GAAGGGCGTCGGGTACACC 62.654 68.421 0.00 0.00 0.00 4.16
4967 5303 2.125793 GAAGGGCGTCGGGTACAC 60.126 66.667 0.00 0.00 0.00 2.90
4968 5304 2.601067 TGAAGGGCGTCGGGTACA 60.601 61.111 0.00 0.00 0.00 2.90
4969 5305 2.183555 CTGAAGGGCGTCGGGTAC 59.816 66.667 0.00 0.00 0.00 3.34
4970 5306 3.072468 CCTGAAGGGCGTCGGGTA 61.072 66.667 6.53 0.00 39.00 3.69
4972 5308 3.665675 CTTCCTGAAGGGCGTCGGG 62.666 68.421 8.09 8.09 44.41 5.14
4973 5309 2.125512 CTTCCTGAAGGGCGTCGG 60.126 66.667 0.00 0.00 34.87 4.79
4981 5317 2.125512 CGCCGGACCTTCCTGAAG 60.126 66.667 5.05 0.00 38.14 3.02
4982 5318 3.702048 CCGCCGGACCTTCCTGAA 61.702 66.667 5.05 0.00 33.30 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.