Multiple sequence alignment - TraesCS7D01G397900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G397900 chr7D 100.000 3469 0 0 1 3469 513310963 513314431 0.000000e+00 6407.0
1 TraesCS7D01G397900 chr7D 93.439 1707 81 16 771 2469 514092143 514093826 0.000000e+00 2503.0
2 TraesCS7D01G397900 chr7D 95.524 849 32 5 771 1617 515238206 515237362 0.000000e+00 1352.0
3 TraesCS7D01G397900 chr7D 95.289 849 34 5 771 1617 515222000 515221156 0.000000e+00 1341.0
4 TraesCS7D01G397900 chr7D 95.006 781 34 2 1689 2469 515236995 515236220 0.000000e+00 1221.0
5 TraesCS7D01G397900 chr7D 94.340 795 38 3 1675 2469 515220801 515220014 0.000000e+00 1212.0
6 TraesCS7D01G397900 chr7D 87.640 178 19 3 2945 3121 475155396 475155221 1.630000e-48 204.0
7 TraesCS7D01G397900 chr7D 88.172 93 7 4 2595 2687 45636205 45636117 1.320000e-19 108.0
8 TraesCS7D01G397900 chr7D 91.250 80 5 2 515 593 514090762 514090840 1.320000e-19 108.0
9 TraesCS7D01G397900 chr7B 94.896 2645 95 16 1 2614 544880159 544882794 0.000000e+00 4100.0
10 TraesCS7D01G397900 chr7B 95.746 1763 53 7 726 2469 545975549 545973790 0.000000e+00 2820.0
11 TraesCS7D01G397900 chr7B 93.678 1914 71 16 580 2469 544981827 544983714 0.000000e+00 2819.0
12 TraesCS7D01G397900 chr7B 90.438 251 13 6 3128 3367 30227827 30227577 1.550000e-83 320.0
13 TraesCS7D01G397900 chr7B 92.405 79 4 2 516 592 544966879 544966957 1.020000e-20 111.0
14 TraesCS7D01G397900 chr7A 92.921 1907 83 23 737 2613 586693952 586692068 0.000000e+00 2726.0
15 TraesCS7D01G397900 chr7A 91.179 1950 111 37 561 2469 588740886 588738957 0.000000e+00 2591.0
16 TraesCS7D01G397900 chr7A 94.236 1492 58 16 984 2469 587518481 587519950 0.000000e+00 2254.0
17 TraesCS7D01G397900 chr7A 90.591 744 44 10 1 721 586694679 586693939 0.000000e+00 963.0
18 TraesCS7D01G397900 chr7A 91.684 481 35 5 515 992 588751020 588750542 0.000000e+00 662.0
19 TraesCS7D01G397900 chr7A 88.986 345 29 5 515 851 587518118 587518461 5.350000e-113 418.0
20 TraesCS7D01G397900 chr7A 80.597 469 74 15 1 458 588748596 588748134 2.560000e-91 346.0
21 TraesCS7D01G397900 chr7A 93.651 189 10 2 2689 2876 586692059 586691872 7.330000e-72 281.0
22 TraesCS7D01G397900 chr7A 88.462 182 21 0 3128 3309 411494660 411494479 1.620000e-53 220.0
23 TraesCS7D01G397900 chr7A 90.598 117 11 0 7 123 586918903 586918787 4.640000e-34 156.0
24 TraesCS7D01G397900 chr7A 89.076 119 11 1 7 123 586933912 586933794 2.790000e-31 147.0
25 TraesCS7D01G397900 chr2B 92.553 188 14 0 3122 3309 741437369 741437182 1.590000e-68 270.0
26 TraesCS7D01G397900 chr2B 75.843 178 31 10 1850 2021 690211207 690211036 2.870000e-11 80.5
27 TraesCS7D01G397900 chr2B 78.632 117 19 4 1839 1952 608541021 608541134 4.800000e-09 73.1
28 TraesCS7D01G397900 chr2B 90.566 53 3 2 2599 2650 243567992 243567941 6.210000e-08 69.4
29 TraesCS7D01G397900 chr1B 92.265 181 14 0 3129 3309 313557654 313557834 1.240000e-64 257.0
30 TraesCS7D01G397900 chr1B 86.869 99 10 3 2612 2709 496660810 496660906 1.320000e-19 108.0
31 TraesCS7D01G397900 chr1D 88.701 177 18 2 2945 3121 466407124 466406950 7.540000e-52 215.0
32 TraesCS7D01G397900 chr1D 92.453 53 3 1 2598 2650 279100965 279100914 1.340000e-09 75.0
33 TraesCS7D01G397900 chr2A 86.842 190 23 2 3122 3309 682009871 682010060 9.750000e-51 211.0
34 TraesCS7D01G397900 chr2A 86.364 176 24 0 2946 3121 713219114 713218939 3.530000e-45 193.0
35 TraesCS7D01G397900 chr2A 75.758 132 25 5 2183 2312 712318544 712318670 3.740000e-05 60.2
36 TraesCS7D01G397900 chr3D 91.447 152 11 2 2945 3095 452487073 452487223 1.260000e-49 207.0
37 TraesCS7D01G397900 chr3D 95.327 107 5 0 3363 3469 555018036 555018142 1.660000e-38 171.0
38 TraesCS7D01G397900 chr3D 94.545 110 4 2 3361 3469 558581319 558581427 5.950000e-38 169.0
39 TraesCS7D01G397900 chr3B 88.235 170 20 0 3128 3297 221137258 221137089 1.630000e-48 204.0
40 TraesCS7D01G397900 chr3A 85.000 200 27 3 3113 3309 23316211 23316410 2.110000e-47 200.0
41 TraesCS7D01G397900 chr3A 92.683 82 6 0 2612 2693 650424845 650424764 6.080000e-23 119.0
42 TraesCS7D01G397900 chr4D 87.006 177 20 3 2946 3121 449386834 449386660 2.730000e-46 196.0
43 TraesCS7D01G397900 chr4D 93.913 115 7 0 3355 3469 78793803 78793689 1.280000e-39 174.0
44 TraesCS7D01G397900 chr6B 89.542 153 15 1 2945 3097 114966762 114966913 3.530000e-45 193.0
45 TraesCS7D01G397900 chr6B 85.556 180 22 4 3128 3305 43832796 43832973 5.910000e-43 185.0
46 TraesCS7D01G397900 chr6B 94.805 77 3 1 2612 2687 715965569 715965645 6.080000e-23 119.0
47 TraesCS7D01G397900 chr6B 74.211 190 42 5 1840 2025 112898616 112898430 4.800000e-09 73.1
48 TraesCS7D01G397900 chr6B 92.157 51 3 1 2608 2658 456771715 456771666 1.730000e-08 71.3
49 TraesCS7D01G397900 chr6D 86.034 179 24 1 2945 3123 454064141 454064318 1.270000e-44 191.0
50 TraesCS7D01G397900 chr6D 94.805 77 3 1 2612 2687 402348191 402348115 6.080000e-23 119.0
51 TraesCS7D01G397900 chr6D 91.566 83 5 1 2612 2692 284371045 284371127 2.830000e-21 113.0
52 TraesCS7D01G397900 chr1A 84.737 190 27 2 2933 3121 556086531 556086343 4.570000e-44 189.0
53 TraesCS7D01G397900 chr1A 93.671 79 2 2 2610 2688 286009944 286010019 7.870000e-22 115.0
54 TraesCS7D01G397900 chr1A 94.444 36 2 0 1840 1875 544390381 544390416 4.840000e-04 56.5
55 TraesCS7D01G397900 chr2D 84.865 185 26 2 2937 3121 122519883 122520065 5.910000e-43 185.0
56 TraesCS7D01G397900 chr2D 97.170 106 3 0 3364 3469 616598871 616598766 2.750000e-41 180.0
57 TraesCS7D01G397900 chr2D 97.170 106 2 1 3364 3469 637857910 637857806 9.890000e-41 178.0
58 TraesCS7D01G397900 chr2D 97.115 104 3 0 3366 3469 80684159 80684056 3.560000e-40 176.0
59 TraesCS7D01G397900 chr2D 94.690 113 5 1 3358 3469 112951013 112950901 1.280000e-39 174.0
60 TraesCS7D01G397900 chr2D 76.190 189 33 10 1839 2021 574346169 574345987 4.770000e-14 89.8
61 TraesCS7D01G397900 chr2D 71.739 276 70 7 1839 2110 573852857 573853128 1.730000e-08 71.3
62 TraesCS7D01G397900 chr2D 77.778 117 20 5 1839 1952 516863423 516863536 2.230000e-07 67.6
63 TraesCS7D01G397900 chr2D 77.982 109 18 6 1839 1944 516925756 516925861 2.890000e-06 63.9
64 TraesCS7D01G397900 chr6A 85.057 174 22 2 3128 3297 301799971 301799798 1.280000e-39 174.0
65 TraesCS7D01G397900 chr6A 78.095 105 23 0 1840 1944 53081406 53081510 2.230000e-07 67.6
66 TraesCS7D01G397900 chr5D 96.226 106 4 0 3364 3469 57365278 57365173 1.280000e-39 174.0
67 TraesCS7D01G397900 chr5D 97.115 104 2 1 3366 3469 330097812 330097710 1.280000e-39 174.0
68 TraesCS7D01G397900 chr4A 92.683 82 3 2 2611 2689 707045428 707045509 7.870000e-22 115.0
69 TraesCS7D01G397900 chr4A 97.368 38 1 0 1840 1877 538840137 538840100 8.040000e-07 65.8
70 TraesCS7D01G397900 chr5B 91.566 83 6 1 2612 2693 354303369 354303287 2.830000e-21 113.0
71 TraesCS7D01G397900 chr5B 81.905 105 8 5 2595 2688 545020597 545020701 1.030000e-10 78.7
72 TraesCS7D01G397900 chr4B 83.505 97 5 2 2601 2687 443547350 443547445 2.870000e-11 80.5
73 TraesCS7D01G397900 chr4B 93.878 49 2 1 2602 2650 454040509 454040462 4.800000e-09 73.1
74 TraesCS7D01G397900 chr4B 92.157 51 3 1 2602 2652 464223189 464223238 1.730000e-08 71.3
75 TraesCS7D01G397900 chrUn 79.048 105 22 0 1840 1944 97478280 97478384 4.800000e-09 73.1
76 TraesCS7D01G397900 chr5A 90.566 53 3 2 2599 2650 691392309 691392360 6.210000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G397900 chr7D 513310963 513314431 3468 False 6407.000000 6407 100.000000 1 3469 1 chr7D.!!$F1 3468
1 TraesCS7D01G397900 chr7D 514090762 514093826 3064 False 1305.500000 2503 92.344500 515 2469 2 chr7D.!!$F2 1954
2 TraesCS7D01G397900 chr7D 515236220 515238206 1986 True 1286.500000 1352 95.265000 771 2469 2 chr7D.!!$R4 1698
3 TraesCS7D01G397900 chr7D 515220014 515222000 1986 True 1276.500000 1341 94.814500 771 2469 2 chr7D.!!$R3 1698
4 TraesCS7D01G397900 chr7B 544880159 544882794 2635 False 4100.000000 4100 94.896000 1 2614 1 chr7B.!!$F1 2613
5 TraesCS7D01G397900 chr7B 545973790 545975549 1759 True 2820.000000 2820 95.746000 726 2469 1 chr7B.!!$R2 1743
6 TraesCS7D01G397900 chr7B 544981827 544983714 1887 False 2819.000000 2819 93.678000 580 2469 1 chr7B.!!$F3 1889
7 TraesCS7D01G397900 chr7A 588738957 588740886 1929 True 2591.000000 2591 91.179000 561 2469 1 chr7A.!!$R4 1908
8 TraesCS7D01G397900 chr7A 587518118 587519950 1832 False 1336.000000 2254 91.611000 515 2469 2 chr7A.!!$F1 1954
9 TraesCS7D01G397900 chr7A 586691872 586694679 2807 True 1323.333333 2726 92.387667 1 2876 3 chr7A.!!$R5 2875
10 TraesCS7D01G397900 chr7A 588748134 588751020 2886 True 504.000000 662 86.140500 1 992 2 chr7A.!!$R6 991

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
933 2139 1.520666 CCCCTGGACCGATGTGTAC 59.479 63.158 0.0 0.0 0.00 2.90 F
1763 3911 0.943359 CGCTCATCGAAGGCATCTCC 60.943 60.000 0.0 0.0 41.67 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2096 4244 0.098200 CCTCGTACGACTTGATGCGA 59.902 55.0 15.28 0.0 0.0 5.10 R
3254 6186 0.034089 GAAGCTTATGTGGCAGGGGT 60.034 55.0 0.00 0.0 0.0 4.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
804 2008 4.996788 TCGAAGTAGTAAAGGTGATCCC 57.003 45.455 0.00 0.00 0.00 3.85
854 2060 2.260869 CCGGCAACCACAACCTGAG 61.261 63.158 0.00 0.00 0.00 3.35
903 2109 5.030874 AGCATAGCGAATAATTAAACCGC 57.969 39.130 16.56 16.56 45.39 5.68
911 2117 4.791163 CGAATAATTAAACCGCACACTTGG 59.209 41.667 0.00 0.00 0.00 3.61
933 2139 1.520666 CCCCTGGACCGATGTGTAC 59.479 63.158 0.00 0.00 0.00 2.90
992 2199 2.636893 CAAGGATCGAGGAGGATTCCAT 59.363 50.000 5.29 0.00 46.64 3.41
1763 3911 0.943359 CGCTCATCGAAGGCATCTCC 60.943 60.000 0.00 0.00 41.67 3.71
1943 4091 1.211818 GCGACGACTGCATCTCCATC 61.212 60.000 0.00 0.00 0.00 3.51
2087 4235 2.743928 GTGCTCAAGGGCTCCACG 60.744 66.667 0.00 0.00 0.00 4.94
2096 4244 4.699522 GGCTCCACGAACGGCCTT 62.700 66.667 0.00 0.00 41.20 4.35
2216 5134 1.282157 GACCAGAAGTACTGCCCCAAT 59.718 52.381 0.00 0.00 44.52 3.16
2240 5158 3.551496 TTGCACCTCCAAGGGCGAG 62.551 63.158 0.00 0.00 40.58 5.03
2297 5215 3.461773 ATCACCGGCACCTCCTCG 61.462 66.667 0.00 0.00 0.00 4.63
2330 5248 3.768922 AGCCTGCTCTGCTCCGAC 61.769 66.667 0.00 0.00 32.41 4.79
2435 5353 2.110213 GTCAAGGTCACCGCCACA 59.890 61.111 0.00 0.00 0.00 4.17
2478 5409 2.743928 CCGCCTGACCTGTGAAGC 60.744 66.667 0.00 0.00 0.00 3.86
2498 5429 2.607187 CGATAACAAGACCGCAAGAGT 58.393 47.619 0.00 0.00 43.02 3.24
2522 5453 0.531532 CTCCTTCCATCTTGCGCGAT 60.532 55.000 12.10 0.00 0.00 4.58
2538 5469 4.570369 TGCGCGATATGATTTCTTTTCTCA 59.430 37.500 12.10 0.00 0.00 3.27
2542 5473 7.277205 CGCGATATGATTTCTTTTCTCAGTAC 58.723 38.462 0.00 0.00 0.00 2.73
2614 5545 3.873361 GGTTGACCGCTTACCTTTATACC 59.127 47.826 0.00 0.00 0.00 2.73
2615 5546 3.825143 TGACCGCTTACCTTTATACCC 57.175 47.619 0.00 0.00 0.00 3.69
2616 5547 2.435437 TGACCGCTTACCTTTATACCCC 59.565 50.000 0.00 0.00 0.00 4.95
2617 5548 1.770658 ACCGCTTACCTTTATACCCCC 59.229 52.381 0.00 0.00 0.00 5.40
2619 5550 2.038164 CCGCTTACCTTTATACCCCCTC 59.962 54.545 0.00 0.00 0.00 4.30
2620 5551 2.038164 CGCTTACCTTTATACCCCCTCC 59.962 54.545 0.00 0.00 0.00 4.30
2621 5552 2.038164 GCTTACCTTTATACCCCCTCCG 59.962 54.545 0.00 0.00 0.00 4.63
2622 5553 3.311990 CTTACCTTTATACCCCCTCCGT 58.688 50.000 0.00 0.00 0.00 4.69
2623 5554 2.275361 ACCTTTATACCCCCTCCGTT 57.725 50.000 0.00 0.00 0.00 4.44
2624 5555 2.121948 ACCTTTATACCCCCTCCGTTC 58.878 52.381 0.00 0.00 0.00 3.95
2625 5556 1.419012 CCTTTATACCCCCTCCGTTCC 59.581 57.143 0.00 0.00 0.00 3.62
2626 5557 2.121129 CTTTATACCCCCTCCGTTCCA 58.879 52.381 0.00 0.00 0.00 3.53
2627 5558 2.267160 TTATACCCCCTCCGTTCCAA 57.733 50.000 0.00 0.00 0.00 3.53
2628 5559 2.267160 TATACCCCCTCCGTTCCAAA 57.733 50.000 0.00 0.00 0.00 3.28
2629 5560 1.374572 ATACCCCCTCCGTTCCAAAA 58.625 50.000 0.00 0.00 0.00 2.44
2630 5561 1.374572 TACCCCCTCCGTTCCAAAAT 58.625 50.000 0.00 0.00 0.00 1.82
2631 5562 1.374572 ACCCCCTCCGTTCCAAAATA 58.625 50.000 0.00 0.00 0.00 1.40
2632 5563 1.283905 ACCCCCTCCGTTCCAAAATAG 59.716 52.381 0.00 0.00 0.00 1.73
2633 5564 1.562475 CCCCCTCCGTTCCAAAATAGA 59.438 52.381 0.00 0.00 0.00 1.98
2634 5565 2.174854 CCCCCTCCGTTCCAAAATAGAT 59.825 50.000 0.00 0.00 0.00 1.98
2635 5566 3.214328 CCCCTCCGTTCCAAAATAGATG 58.786 50.000 0.00 0.00 0.00 2.90
2636 5567 3.118038 CCCCTCCGTTCCAAAATAGATGA 60.118 47.826 0.00 0.00 0.00 2.92
2637 5568 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2638 5569 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
2639 5570 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
2640 5571 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
2641 5572 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
2642 5573 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
2643 5574 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
2644 5575 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
2645 5576 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
2646 5577 7.094549 CGTTCCAAAATAGATGACCCAACTTTA 60.095 37.037 0.00 0.00 0.00 1.85
2647 5578 8.749354 GTTCCAAAATAGATGACCCAACTTTAT 58.251 33.333 0.00 0.00 0.00 1.40
2648 5579 9.983024 TTCCAAAATAGATGACCCAACTTTATA 57.017 29.630 0.00 0.00 0.00 0.98
2649 5580 9.403583 TCCAAAATAGATGACCCAACTTTATAC 57.596 33.333 0.00 0.00 0.00 1.47
2650 5581 9.184523 CCAAAATAGATGACCCAACTTTATACA 57.815 33.333 0.00 0.00 0.00 2.29
2652 5583 9.747898 AAAATAGATGACCCAACTTTATACACA 57.252 29.630 0.00 0.00 0.00 3.72
2653 5584 9.747898 AAATAGATGACCCAACTTTATACACAA 57.252 29.630 0.00 0.00 0.00 3.33
2654 5585 9.747898 AATAGATGACCCAACTTTATACACAAA 57.252 29.630 0.00 0.00 0.00 2.83
2655 5586 7.687941 AGATGACCCAACTTTATACACAAAG 57.312 36.000 0.00 0.00 40.62 2.77
2665 5596 7.448748 ACTTTATACACAAAGTTGGGTCATC 57.551 36.000 1.35 0.00 42.04 2.92
2666 5597 7.231467 ACTTTATACACAAAGTTGGGTCATCT 58.769 34.615 1.35 0.00 42.04 2.90
2667 5598 8.380099 ACTTTATACACAAAGTTGGGTCATCTA 58.620 33.333 1.35 0.00 42.04 1.98
2668 5599 9.396022 CTTTATACACAAAGTTGGGTCATCTAT 57.604 33.333 1.35 0.00 42.04 1.98
2669 5600 9.747898 TTTATACACAAAGTTGGGTCATCTATT 57.252 29.630 1.35 0.00 42.04 1.73
2670 5601 9.747898 TTATACACAAAGTTGGGTCATCTATTT 57.252 29.630 1.35 0.00 42.04 1.40
2671 5602 6.976934 ACACAAAGTTGGGTCATCTATTTT 57.023 33.333 0.00 0.00 42.04 1.82
2672 5603 6.748132 ACACAAAGTTGGGTCATCTATTTTG 58.252 36.000 0.00 0.00 42.04 2.44
2673 5604 6.158598 CACAAAGTTGGGTCATCTATTTTGG 58.841 40.000 0.00 0.00 0.00 3.28
2674 5605 6.015519 CACAAAGTTGGGTCATCTATTTTGGA 60.016 38.462 0.00 0.00 0.00 3.53
2675 5606 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
2676 5607 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
2677 5608 5.640147 AGTTGGGTCATCTATTTTGGAACA 58.360 37.500 0.00 0.00 0.00 3.18
2678 5609 5.711976 AGTTGGGTCATCTATTTTGGAACAG 59.288 40.000 0.00 0.00 42.39 3.16
2679 5610 5.512942 TGGGTCATCTATTTTGGAACAGA 57.487 39.130 0.00 0.00 42.39 3.41
2680 5611 5.500234 TGGGTCATCTATTTTGGAACAGAG 58.500 41.667 0.00 0.00 42.39 3.35
2681 5612 4.884164 GGGTCATCTATTTTGGAACAGAGG 59.116 45.833 0.00 0.00 42.39 3.69
2682 5613 4.884164 GGTCATCTATTTTGGAACAGAGGG 59.116 45.833 0.00 0.00 42.39 4.30
2683 5614 5.339200 GGTCATCTATTTTGGAACAGAGGGA 60.339 44.000 0.00 0.00 42.39 4.20
2684 5615 5.819901 GTCATCTATTTTGGAACAGAGGGAG 59.180 44.000 0.00 0.00 42.39 4.30
2685 5616 5.488919 TCATCTATTTTGGAACAGAGGGAGT 59.511 40.000 0.00 0.00 42.39 3.85
2686 5617 6.672218 TCATCTATTTTGGAACAGAGGGAGTA 59.328 38.462 0.00 0.00 42.39 2.59
2687 5618 7.348274 TCATCTATTTTGGAACAGAGGGAGTAT 59.652 37.037 0.00 0.00 42.39 2.12
2721 5652 1.320507 TATATGTACGTGCCGGCTCA 58.679 50.000 29.70 17.98 0.00 4.26
2739 5670 3.432749 GCTCAGAGCCACTTGATCCATAA 60.433 47.826 11.84 0.00 34.48 1.90
2756 5687 8.572185 TGATCCATAAACTTTTGACGATTTTGA 58.428 29.630 0.00 0.00 0.00 2.69
2793 5724 3.003897 TCGATTTTTGTGCCGCTAAAACT 59.996 39.130 0.00 2.31 35.37 2.66
2798 5729 0.107831 TGTGCCGCTAAAACTGGTCT 59.892 50.000 0.00 0.00 0.00 3.85
2799 5730 1.345089 TGTGCCGCTAAAACTGGTCTA 59.655 47.619 0.00 0.00 0.00 2.59
2848 5780 9.995003 GATCTTGAGATTTATTGAGTATCTGGT 57.005 33.333 0.00 0.00 34.37 4.00
2876 5808 4.277423 ACGTGTTGCAACTATTTAGCCTTT 59.723 37.500 28.61 0.00 0.00 3.11
2877 5809 5.470777 ACGTGTTGCAACTATTTAGCCTTTA 59.529 36.000 28.61 2.21 0.00 1.85
2878 5810 6.021596 CGTGTTGCAACTATTTAGCCTTTAG 58.978 40.000 28.61 2.07 0.00 1.85
2880 5812 7.368059 GTGTTGCAACTATTTAGCCTTTAGTT 58.632 34.615 28.61 0.00 36.79 2.24
2885 5817 7.377766 CAACTATTTAGCCTTTAGTTGCAGA 57.622 36.000 8.58 0.00 43.20 4.26
2886 5818 7.467623 CAACTATTTAGCCTTTAGTTGCAGAG 58.532 38.462 8.58 0.00 43.20 3.35
2887 5819 6.712276 ACTATTTAGCCTTTAGTTGCAGAGT 58.288 36.000 0.00 0.00 0.00 3.24
2888 5820 6.819146 ACTATTTAGCCTTTAGTTGCAGAGTC 59.181 38.462 0.00 0.00 0.00 3.36
2889 5821 2.086054 AGCCTTTAGTTGCAGAGTCG 57.914 50.000 0.00 0.00 0.00 4.18
2890 5822 0.444260 GCCTTTAGTTGCAGAGTCGC 59.556 55.000 0.00 0.77 0.00 5.19
2891 5823 1.941668 GCCTTTAGTTGCAGAGTCGCT 60.942 52.381 8.13 0.00 0.00 4.93
2892 5824 2.674177 GCCTTTAGTTGCAGAGTCGCTA 60.674 50.000 8.13 0.00 0.00 4.26
2893 5825 2.924290 CCTTTAGTTGCAGAGTCGCTAC 59.076 50.000 11.34 11.34 37.82 3.58
2906 5838 4.323553 AGTCGCTACTCAAAAGTGTTCT 57.676 40.909 0.00 0.00 36.92 3.01
2910 5842 5.342791 GTCGCTACTCAAAAGTGTTCTACTC 59.657 44.000 0.00 0.00 39.18 2.59
2911 5843 5.009310 TCGCTACTCAAAAGTGTTCTACTCA 59.991 40.000 0.00 0.00 39.18 3.41
2913 5845 6.200286 CGCTACTCAAAAGTGTTCTACTCAAA 59.800 38.462 0.00 0.00 39.18 2.69
2914 5846 7.095607 CGCTACTCAAAAGTGTTCTACTCAAAT 60.096 37.037 0.00 0.00 39.18 2.32
2915 5847 8.560374 GCTACTCAAAAGTGTTCTACTCAAATT 58.440 33.333 0.00 0.00 39.18 1.82
2919 5851 9.226345 CTCAAAAGTGTTCTACTCAAATTCAAC 57.774 33.333 0.00 0.00 39.18 3.18
2920 5852 8.735315 TCAAAAGTGTTCTACTCAAATTCAACA 58.265 29.630 0.00 0.00 39.18 3.33
2921 5853 9.013490 CAAAAGTGTTCTACTCAAATTCAACAG 57.987 33.333 0.00 0.00 39.18 3.16
2923 5855 8.958119 AAGTGTTCTACTCAAATTCAACAGTA 57.042 30.769 0.00 0.00 39.18 2.74
2925 5857 8.993121 AGTGTTCTACTCAAATTCAACAGTATG 58.007 33.333 0.00 0.00 37.25 2.39
2926 5858 8.230486 GTGTTCTACTCAAATTCAACAGTATGG 58.770 37.037 0.00 0.00 43.62 2.74
2927 5859 6.985188 TCTACTCAAATTCAACAGTATGGC 57.015 37.500 0.00 0.00 43.62 4.40
2928 5860 5.880332 TCTACTCAAATTCAACAGTATGGCC 59.120 40.000 0.00 0.00 43.62 5.36
2929 5861 4.666512 ACTCAAATTCAACAGTATGGCCT 58.333 39.130 3.32 0.00 43.62 5.19
2934 5866 7.546358 TCAAATTCAACAGTATGGCCTTATTG 58.454 34.615 16.72 16.72 43.62 1.90
2983 5915 9.449719 AAAACTTCCGATCTATTTATCAACTGT 57.550 29.630 0.00 0.00 0.00 3.55
2984 5916 8.649973 AACTTCCGATCTATTTATCAACTGTC 57.350 34.615 0.00 0.00 0.00 3.51
2985 5917 7.782049 ACTTCCGATCTATTTATCAACTGTCA 58.218 34.615 0.00 0.00 0.00 3.58
2986 5918 8.258007 ACTTCCGATCTATTTATCAACTGTCAA 58.742 33.333 0.00 0.00 0.00 3.18
2987 5919 8.648557 TTCCGATCTATTTATCAACTGTCAAG 57.351 34.615 0.00 0.00 0.00 3.02
2988 5920 7.210174 TCCGATCTATTTATCAACTGTCAAGG 58.790 38.462 0.00 0.00 0.00 3.61
2989 5921 6.986817 CCGATCTATTTATCAACTGTCAAGGT 59.013 38.462 0.00 0.00 0.00 3.50
2990 5922 8.141909 CCGATCTATTTATCAACTGTCAAGGTA 58.858 37.037 0.00 0.00 0.00 3.08
2991 5923 9.186323 CGATCTATTTATCAACTGTCAAGGTAG 57.814 37.037 0.00 0.00 0.00 3.18
2997 5929 9.787435 ATTTATCAACTGTCAAGGTAGTACAAA 57.213 29.630 2.06 0.00 0.00 2.83
2998 5930 9.616156 TTTATCAACTGTCAAGGTAGTACAAAA 57.384 29.630 2.06 0.00 0.00 2.44
2999 5931 9.616156 TTATCAACTGTCAAGGTAGTACAAAAA 57.384 29.630 2.06 0.00 0.00 1.94
3037 5969 7.834881 AAGTTATATTCAGATCCGTAGACCA 57.165 36.000 0.00 0.00 0.00 4.02
3038 5970 7.216973 AGTTATATTCAGATCCGTAGACCAC 57.783 40.000 0.00 0.00 0.00 4.16
3039 5971 6.208994 AGTTATATTCAGATCCGTAGACCACC 59.791 42.308 0.00 0.00 0.00 4.61
3040 5972 2.526888 TTCAGATCCGTAGACCACCT 57.473 50.000 0.00 0.00 0.00 4.00
3041 5973 3.657398 TTCAGATCCGTAGACCACCTA 57.343 47.619 0.00 0.00 0.00 3.08
3042 5974 3.210232 TCAGATCCGTAGACCACCTAG 57.790 52.381 0.00 0.00 0.00 3.02
3043 5975 1.609555 CAGATCCGTAGACCACCTAGC 59.390 57.143 0.00 0.00 0.00 3.42
3044 5976 0.592148 GATCCGTAGACCACCTAGCG 59.408 60.000 0.00 0.00 0.00 4.26
3045 5977 0.182061 ATCCGTAGACCACCTAGCGA 59.818 55.000 0.00 0.00 0.00 4.93
3046 5978 0.745845 TCCGTAGACCACCTAGCGAC 60.746 60.000 0.00 0.00 0.00 5.19
3047 5979 1.351012 CGTAGACCACCTAGCGACG 59.649 63.158 0.00 0.00 0.00 5.12
3048 5980 1.086067 CGTAGACCACCTAGCGACGA 61.086 60.000 0.00 0.00 0.00 4.20
3049 5981 0.376502 GTAGACCACCTAGCGACGAC 59.623 60.000 0.00 0.00 0.00 4.34
3050 5982 0.251354 TAGACCACCTAGCGACGACT 59.749 55.000 0.00 0.00 0.00 4.18
3051 5983 0.251354 AGACCACCTAGCGACGACTA 59.749 55.000 0.00 0.00 0.00 2.59
3052 5984 0.376502 GACCACCTAGCGACGACTAC 59.623 60.000 0.00 0.00 0.00 2.73
3053 5985 0.321919 ACCACCTAGCGACGACTACA 60.322 55.000 0.00 0.00 0.00 2.74
3054 5986 0.806868 CCACCTAGCGACGACTACAA 59.193 55.000 0.00 0.00 0.00 2.41
3055 5987 1.202154 CCACCTAGCGACGACTACAAG 60.202 57.143 0.00 0.00 0.00 3.16
3056 5988 0.450983 ACCTAGCGACGACTACAAGC 59.549 55.000 0.00 0.00 0.00 4.01
3057 5989 0.450583 CCTAGCGACGACTACAAGCA 59.549 55.000 0.00 0.00 0.00 3.91
3058 5990 1.536149 CTAGCGACGACTACAAGCAC 58.464 55.000 0.00 0.00 0.00 4.40
3059 5991 1.130749 CTAGCGACGACTACAAGCACT 59.869 52.381 0.00 0.00 0.00 4.40
3060 5992 0.387367 AGCGACGACTACAAGCACTG 60.387 55.000 0.00 0.00 0.00 3.66
3061 5993 1.344942 GCGACGACTACAAGCACTGG 61.345 60.000 0.00 0.00 0.00 4.00
3062 5994 0.240145 CGACGACTACAAGCACTGGA 59.760 55.000 0.00 0.00 0.00 3.86
3063 5995 1.729472 CGACGACTACAAGCACTGGAG 60.729 57.143 0.00 0.00 42.47 3.86
3064 5996 0.038159 ACGACTACAAGCACTGGAGC 60.038 55.000 0.00 0.00 40.05 4.70
3065 5997 1.073216 CGACTACAAGCACTGGAGCG 61.073 60.000 0.00 0.53 40.05 5.03
3066 5998 0.243907 GACTACAAGCACTGGAGCGA 59.756 55.000 0.00 0.00 40.05 4.93
3067 5999 0.244994 ACTACAAGCACTGGAGCGAG 59.755 55.000 0.00 0.00 40.05 5.03
3068 6000 1.079819 TACAAGCACTGGAGCGAGC 60.080 57.895 0.00 0.00 40.15 5.03
3069 6001 2.507110 TACAAGCACTGGAGCGAGCC 62.507 60.000 0.00 0.00 40.15 4.70
3070 6002 4.749310 AAGCACTGGAGCGAGCCG 62.749 66.667 0.00 0.00 40.15 5.52
3072 6004 4.742201 GCACTGGAGCGAGCCGAA 62.742 66.667 0.00 0.00 0.00 4.30
3073 6005 2.507992 CACTGGAGCGAGCCGAAG 60.508 66.667 0.00 0.00 0.00 3.79
3093 6025 4.796231 ACACCGCCGTCATCGCTC 62.796 66.667 0.00 0.00 35.54 5.03
3094 6026 4.498520 CACCGCCGTCATCGCTCT 62.499 66.667 0.00 0.00 35.54 4.09
3095 6027 3.760035 ACCGCCGTCATCGCTCTT 61.760 61.111 0.00 0.00 35.54 2.85
3096 6028 2.956964 CCGCCGTCATCGCTCTTC 60.957 66.667 0.00 0.00 35.54 2.87
3097 6029 2.103143 CGCCGTCATCGCTCTTCT 59.897 61.111 0.00 0.00 35.54 2.85
3098 6030 1.355563 CGCCGTCATCGCTCTTCTA 59.644 57.895 0.00 0.00 35.54 2.10
3099 6031 0.039978 CGCCGTCATCGCTCTTCTAT 60.040 55.000 0.00 0.00 35.54 1.98
3100 6032 1.692296 GCCGTCATCGCTCTTCTATC 58.308 55.000 0.00 0.00 35.54 2.08
3101 6033 1.001268 GCCGTCATCGCTCTTCTATCA 60.001 52.381 0.00 0.00 35.54 2.15
3102 6034 2.656085 CCGTCATCGCTCTTCTATCAC 58.344 52.381 0.00 0.00 35.54 3.06
3103 6035 2.292016 CCGTCATCGCTCTTCTATCACT 59.708 50.000 0.00 0.00 35.54 3.41
3104 6036 3.295785 CGTCATCGCTCTTCTATCACTG 58.704 50.000 0.00 0.00 0.00 3.66
3105 6037 3.637432 GTCATCGCTCTTCTATCACTGG 58.363 50.000 0.00 0.00 0.00 4.00
3106 6038 3.316588 GTCATCGCTCTTCTATCACTGGA 59.683 47.826 0.00 0.00 0.00 3.86
3107 6039 3.567585 TCATCGCTCTTCTATCACTGGAG 59.432 47.826 0.00 0.00 0.00 3.86
3108 6040 1.678627 TCGCTCTTCTATCACTGGAGC 59.321 52.381 0.00 0.00 43.86 4.70
3109 6041 1.680735 CGCTCTTCTATCACTGGAGCT 59.319 52.381 10.71 0.00 44.75 4.09
3110 6042 2.881513 CGCTCTTCTATCACTGGAGCTA 59.118 50.000 10.71 0.00 44.75 3.32
3111 6043 3.058293 CGCTCTTCTATCACTGGAGCTAG 60.058 52.174 10.71 0.00 44.75 3.42
3112 6044 3.255642 GCTCTTCTATCACTGGAGCTAGG 59.744 52.174 0.00 0.00 43.92 3.02
3113 6045 3.226777 TCTTCTATCACTGGAGCTAGGC 58.773 50.000 0.00 0.00 0.00 3.93
3114 6046 2.755952 TCTATCACTGGAGCTAGGCA 57.244 50.000 0.00 0.00 0.00 4.75
3115 6047 3.032265 TCTATCACTGGAGCTAGGCAA 57.968 47.619 0.00 0.00 0.00 4.52
3116 6048 3.374764 TCTATCACTGGAGCTAGGCAAA 58.625 45.455 0.00 0.00 0.00 3.68
3117 6049 2.409948 ATCACTGGAGCTAGGCAAAC 57.590 50.000 0.00 0.00 0.00 2.93
3118 6050 0.324943 TCACTGGAGCTAGGCAAACC 59.675 55.000 0.00 0.00 0.00 3.27
3182 6114 9.846248 ACTATTTTATTTCTCTTGACATGCAAC 57.154 29.630 0.00 0.00 31.96 4.17
3183 6115 9.294030 CTATTTTATTTCTCTTGACATGCAACC 57.706 33.333 0.00 0.00 31.96 3.77
3184 6116 6.899393 TTTATTTCTCTTGACATGCAACCT 57.101 33.333 0.00 0.00 31.96 3.50
3185 6117 7.994425 TTTATTTCTCTTGACATGCAACCTA 57.006 32.000 0.00 0.00 31.96 3.08
3186 6118 8.579850 TTTATTTCTCTTGACATGCAACCTAT 57.420 30.769 0.00 0.00 31.96 2.57
3187 6119 6.690194 ATTTCTCTTGACATGCAACCTATC 57.310 37.500 0.00 0.00 31.96 2.08
3188 6120 4.142609 TCTCTTGACATGCAACCTATCC 57.857 45.455 0.00 0.00 31.96 2.59
3189 6121 3.519107 TCTCTTGACATGCAACCTATCCA 59.481 43.478 0.00 0.00 31.96 3.41
3190 6122 3.609853 TCTTGACATGCAACCTATCCAC 58.390 45.455 0.00 0.00 31.96 4.02
3191 6123 2.418368 TGACATGCAACCTATCCACC 57.582 50.000 0.00 0.00 0.00 4.61
3192 6124 1.915489 TGACATGCAACCTATCCACCT 59.085 47.619 0.00 0.00 0.00 4.00
3193 6125 2.092968 TGACATGCAACCTATCCACCTC 60.093 50.000 0.00 0.00 0.00 3.85
3194 6126 1.915489 ACATGCAACCTATCCACCTCA 59.085 47.619 0.00 0.00 0.00 3.86
3195 6127 2.511218 ACATGCAACCTATCCACCTCAT 59.489 45.455 0.00 0.00 0.00 2.90
3196 6128 3.144506 CATGCAACCTATCCACCTCATC 58.855 50.000 0.00 0.00 0.00 2.92
3197 6129 2.195727 TGCAACCTATCCACCTCATCA 58.804 47.619 0.00 0.00 0.00 3.07
3198 6130 2.575735 TGCAACCTATCCACCTCATCAA 59.424 45.455 0.00 0.00 0.00 2.57
3199 6131 3.010027 TGCAACCTATCCACCTCATCAAA 59.990 43.478 0.00 0.00 0.00 2.69
3200 6132 3.378427 GCAACCTATCCACCTCATCAAAC 59.622 47.826 0.00 0.00 0.00 2.93
3201 6133 3.933861 ACCTATCCACCTCATCAAACC 57.066 47.619 0.00 0.00 0.00 3.27
3202 6134 3.464828 ACCTATCCACCTCATCAAACCT 58.535 45.455 0.00 0.00 0.00 3.50
3203 6135 3.200825 ACCTATCCACCTCATCAAACCTG 59.799 47.826 0.00 0.00 0.00 4.00
3204 6136 2.134789 ATCCACCTCATCAAACCTGC 57.865 50.000 0.00 0.00 0.00 4.85
3205 6137 0.038166 TCCACCTCATCAAACCTGCC 59.962 55.000 0.00 0.00 0.00 4.85
3206 6138 0.251297 CCACCTCATCAAACCTGCCA 60.251 55.000 0.00 0.00 0.00 4.92
3207 6139 0.883833 CACCTCATCAAACCTGCCAC 59.116 55.000 0.00 0.00 0.00 5.01
3208 6140 0.478072 ACCTCATCAAACCTGCCACA 59.522 50.000 0.00 0.00 0.00 4.17
3209 6141 1.076024 ACCTCATCAAACCTGCCACAT 59.924 47.619 0.00 0.00 0.00 3.21
3210 6142 1.747355 CCTCATCAAACCTGCCACATC 59.253 52.381 0.00 0.00 0.00 3.06
3211 6143 2.439409 CTCATCAAACCTGCCACATCA 58.561 47.619 0.00 0.00 0.00 3.07
3212 6144 2.422479 CTCATCAAACCTGCCACATCAG 59.578 50.000 0.00 0.00 0.00 2.90
3213 6145 1.135199 CATCAAACCTGCCACATCAGC 60.135 52.381 0.00 0.00 32.87 4.26
3214 6146 0.178995 TCAAACCTGCCACATCAGCA 60.179 50.000 0.00 0.00 38.82 4.41
3215 6147 0.892755 CAAACCTGCCACATCAGCAT 59.107 50.000 0.00 0.00 40.04 3.79
3216 6148 1.274167 CAAACCTGCCACATCAGCATT 59.726 47.619 0.00 0.00 40.04 3.56
3217 6149 1.180029 AACCTGCCACATCAGCATTC 58.820 50.000 0.00 0.00 40.04 2.67
3218 6150 0.330604 ACCTGCCACATCAGCATTCT 59.669 50.000 0.00 0.00 40.04 2.40
3219 6151 1.272313 ACCTGCCACATCAGCATTCTT 60.272 47.619 0.00 0.00 40.04 2.52
3220 6152 1.822990 CCTGCCACATCAGCATTCTTT 59.177 47.619 0.00 0.00 40.04 2.52
3221 6153 2.159282 CCTGCCACATCAGCATTCTTTC 60.159 50.000 0.00 0.00 40.04 2.62
3222 6154 2.490509 CTGCCACATCAGCATTCTTTCA 59.509 45.455 0.00 0.00 40.04 2.69
3223 6155 2.490509 TGCCACATCAGCATTCTTTCAG 59.509 45.455 0.00 0.00 34.69 3.02
3224 6156 2.490903 GCCACATCAGCATTCTTTCAGT 59.509 45.455 0.00 0.00 0.00 3.41
3225 6157 3.672511 GCCACATCAGCATTCTTTCAGTG 60.673 47.826 0.00 0.00 0.00 3.66
3226 6158 3.754850 CCACATCAGCATTCTTTCAGTGA 59.245 43.478 0.00 0.00 0.00 3.41
3227 6159 4.379186 CCACATCAGCATTCTTTCAGTGAC 60.379 45.833 0.00 0.00 0.00 3.67
3228 6160 4.454847 CACATCAGCATTCTTTCAGTGACT 59.545 41.667 0.00 0.00 0.00 3.41
3229 6161 5.048921 CACATCAGCATTCTTTCAGTGACTT 60.049 40.000 0.00 0.00 0.00 3.01
3230 6162 6.148315 CACATCAGCATTCTTTCAGTGACTTA 59.852 38.462 0.00 0.00 0.00 2.24
3231 6163 6.148480 ACATCAGCATTCTTTCAGTGACTTAC 59.852 38.462 0.00 0.00 0.00 2.34
3232 6164 5.610398 TCAGCATTCTTTCAGTGACTTACA 58.390 37.500 0.00 0.00 0.00 2.41
3233 6165 6.233434 TCAGCATTCTTTCAGTGACTTACAT 58.767 36.000 0.00 0.00 0.00 2.29
3234 6166 7.386059 TCAGCATTCTTTCAGTGACTTACATA 58.614 34.615 0.00 0.00 0.00 2.29
3235 6167 8.043113 TCAGCATTCTTTCAGTGACTTACATAT 58.957 33.333 0.00 0.00 0.00 1.78
3236 6168 8.121086 CAGCATTCTTTCAGTGACTTACATATG 58.879 37.037 0.00 0.00 0.00 1.78
3237 6169 7.281774 AGCATTCTTTCAGTGACTTACATATGG 59.718 37.037 7.80 0.00 0.00 2.74
3238 6170 7.467811 GCATTCTTTCAGTGACTTACATATGGG 60.468 40.741 7.80 0.00 0.00 4.00
3239 6171 6.867519 TCTTTCAGTGACTTACATATGGGA 57.132 37.500 7.80 0.00 0.00 4.37
3240 6172 6.640518 TCTTTCAGTGACTTACATATGGGAC 58.359 40.000 7.80 0.00 0.00 4.46
3241 6173 5.353394 TTCAGTGACTTACATATGGGACC 57.647 43.478 7.80 0.00 0.00 4.46
3242 6174 4.358214 TCAGTGACTTACATATGGGACCA 58.642 43.478 7.80 0.00 0.00 4.02
3243 6175 4.405680 TCAGTGACTTACATATGGGACCAG 59.594 45.833 7.80 0.00 0.00 4.00
3244 6176 3.134804 AGTGACTTACATATGGGACCAGC 59.865 47.826 7.80 0.00 0.00 4.85
3245 6177 2.438021 TGACTTACATATGGGACCAGCC 59.562 50.000 7.80 0.00 0.00 4.85
3246 6178 2.438021 GACTTACATATGGGACCAGCCA 59.562 50.000 7.80 0.00 38.95 4.75
3247 6179 2.172717 ACTTACATATGGGACCAGCCAC 59.827 50.000 7.80 0.00 38.95 5.01
3248 6180 2.190398 TACATATGGGACCAGCCACT 57.810 50.000 7.80 0.00 38.95 4.00
3249 6181 2.190398 ACATATGGGACCAGCCACTA 57.810 50.000 7.80 0.00 38.95 2.74
3250 6182 1.768870 ACATATGGGACCAGCCACTAC 59.231 52.381 7.80 0.00 38.95 2.73
3251 6183 1.768275 CATATGGGACCAGCCACTACA 59.232 52.381 0.00 0.00 38.95 2.74
3252 6184 1.496060 TATGGGACCAGCCACTACAG 58.504 55.000 0.00 0.00 38.95 2.74
3253 6185 1.915078 ATGGGACCAGCCACTACAGC 61.915 60.000 0.00 0.00 38.95 4.40
3254 6186 2.592993 GGGACCAGCCACTACAGCA 61.593 63.158 0.00 0.00 38.95 4.41
3255 6187 1.376037 GGACCAGCCACTACAGCAC 60.376 63.158 0.00 0.00 36.34 4.40
3256 6188 1.376037 GACCAGCCACTACAGCACC 60.376 63.158 0.00 0.00 0.00 5.01
3257 6189 2.045926 CCAGCCACTACAGCACCC 60.046 66.667 0.00 0.00 0.00 4.61
3258 6190 2.045926 CAGCCACTACAGCACCCC 60.046 66.667 0.00 0.00 0.00 4.95
3259 6191 2.203998 AGCCACTACAGCACCCCT 60.204 61.111 0.00 0.00 0.00 4.79
3261 6193 2.045926 CCACTACAGCACCCCTGC 60.046 66.667 0.00 0.00 45.78 4.85
3262 6194 2.045926 CACTACAGCACCCCTGCC 60.046 66.667 0.00 0.00 45.53 4.85
3263 6195 2.529136 ACTACAGCACCCCTGCCA 60.529 61.111 0.00 0.00 45.53 4.92
3264 6196 2.045926 CTACAGCACCCCTGCCAC 60.046 66.667 0.00 0.00 45.53 5.01
3265 6197 2.851588 TACAGCACCCCTGCCACA 60.852 61.111 0.00 0.00 45.53 4.17
3266 6198 2.202236 CTACAGCACCCCTGCCACAT 62.202 60.000 0.00 0.00 45.53 3.21
3267 6199 0.912006 TACAGCACCCCTGCCACATA 60.912 55.000 0.00 0.00 45.53 2.29
3268 6200 1.001020 CAGCACCCCTGCCACATAA 60.001 57.895 0.00 0.00 45.53 1.90
3269 6201 1.033746 CAGCACCCCTGCCACATAAG 61.034 60.000 0.00 0.00 45.53 1.73
3270 6202 2.418083 GCACCCCTGCCACATAAGC 61.418 63.158 0.00 0.00 37.45 3.09
3271 6203 1.304282 CACCCCTGCCACATAAGCT 59.696 57.895 0.00 0.00 0.00 3.74
3272 6204 0.323725 CACCCCTGCCACATAAGCTT 60.324 55.000 3.48 3.48 0.00 3.74
3273 6205 0.034089 ACCCCTGCCACATAAGCTTC 60.034 55.000 0.00 0.00 0.00 3.86
3274 6206 0.034186 CCCCTGCCACATAAGCTTCA 60.034 55.000 0.00 0.00 0.00 3.02
3275 6207 1.616725 CCCCTGCCACATAAGCTTCAA 60.617 52.381 0.00 0.00 0.00 2.69
3276 6208 2.381911 CCCTGCCACATAAGCTTCAAT 58.618 47.619 0.00 0.00 0.00 2.57
3277 6209 2.762327 CCCTGCCACATAAGCTTCAATT 59.238 45.455 0.00 0.00 0.00 2.32
3278 6210 3.196254 CCCTGCCACATAAGCTTCAATTT 59.804 43.478 0.00 0.00 0.00 1.82
3279 6211 4.402155 CCCTGCCACATAAGCTTCAATTTA 59.598 41.667 0.00 0.00 0.00 1.40
3280 6212 5.069516 CCCTGCCACATAAGCTTCAATTTAT 59.930 40.000 0.00 0.00 0.00 1.40
3281 6213 6.407299 CCCTGCCACATAAGCTTCAATTTATT 60.407 38.462 0.00 0.00 0.00 1.40
3282 6214 6.477688 CCTGCCACATAAGCTTCAATTTATTG 59.522 38.462 0.00 0.00 39.10 1.90
3283 6215 5.811613 TGCCACATAAGCTTCAATTTATTGC 59.188 36.000 0.00 0.00 37.68 3.56
3284 6216 6.044682 GCCACATAAGCTTCAATTTATTGCT 58.955 36.000 0.00 0.00 37.68 3.91
3285 6217 7.147932 TGCCACATAAGCTTCAATTTATTGCTA 60.148 33.333 0.00 0.00 37.68 3.49
3286 6218 7.706179 GCCACATAAGCTTCAATTTATTGCTAA 59.294 33.333 0.00 0.00 37.68 3.09
3287 6219 9.241317 CCACATAAGCTTCAATTTATTGCTAAG 57.759 33.333 0.00 0.00 37.68 2.18
3288 6220 9.241317 CACATAAGCTTCAATTTATTGCTAAGG 57.759 33.333 0.00 0.00 37.68 2.69
3289 6221 9.189156 ACATAAGCTTCAATTTATTGCTAAGGA 57.811 29.630 0.00 0.00 37.68 3.36
3290 6222 9.455847 CATAAGCTTCAATTTATTGCTAAGGAC 57.544 33.333 0.00 0.00 37.68 3.85
3291 6223 6.456795 AGCTTCAATTTATTGCTAAGGACC 57.543 37.500 0.00 0.00 37.68 4.46
3292 6224 5.360999 AGCTTCAATTTATTGCTAAGGACCC 59.639 40.000 0.00 0.00 37.68 4.46
3293 6225 5.127031 GCTTCAATTTATTGCTAAGGACCCA 59.873 40.000 0.00 0.00 37.68 4.51
3294 6226 6.524101 TTCAATTTATTGCTAAGGACCCAC 57.476 37.500 0.00 0.00 37.68 4.61
3295 6227 4.953579 TCAATTTATTGCTAAGGACCCACC 59.046 41.667 0.00 0.00 37.68 4.61
3296 6228 4.601406 ATTTATTGCTAAGGACCCACCA 57.399 40.909 0.00 0.00 42.04 4.17
3297 6229 3.359695 TTATTGCTAAGGACCCACCAC 57.640 47.619 0.00 0.00 42.04 4.16
3298 6230 1.072266 ATTGCTAAGGACCCACCACA 58.928 50.000 0.00 0.00 42.04 4.17
3299 6231 0.847373 TTGCTAAGGACCCACCACAA 59.153 50.000 0.00 0.00 42.04 3.33
3300 6232 0.109723 TGCTAAGGACCCACCACAAC 59.890 55.000 0.00 0.00 42.04 3.32
3301 6233 0.608308 GCTAAGGACCCACCACAACC 60.608 60.000 0.00 0.00 42.04 3.77
3302 6234 1.064825 CTAAGGACCCACCACAACCT 58.935 55.000 0.00 0.00 42.04 3.50
3303 6235 0.768622 TAAGGACCCACCACAACCTG 59.231 55.000 0.00 0.00 42.04 4.00
3305 6237 2.597510 GACCCACCACAACCTGGC 60.598 66.667 0.00 0.00 45.32 4.85
3306 6238 4.218686 ACCCACCACAACCTGGCC 62.219 66.667 0.00 0.00 45.32 5.36
3307 6239 3.902112 CCCACCACAACCTGGCCT 61.902 66.667 3.32 0.00 45.32 5.19
3308 6240 2.282462 CCACCACAACCTGGCCTC 60.282 66.667 3.32 0.00 45.32 4.70
3309 6241 2.833913 CCACCACAACCTGGCCTCT 61.834 63.158 3.32 0.00 45.32 3.69
3310 6242 1.302832 CACCACAACCTGGCCTCTC 60.303 63.158 3.32 0.00 45.32 3.20
3311 6243 1.462238 ACCACAACCTGGCCTCTCT 60.462 57.895 3.32 0.00 45.32 3.10
3312 6244 1.298014 CCACAACCTGGCCTCTCTC 59.702 63.158 3.32 0.00 31.36 3.20
3313 6245 1.197430 CCACAACCTGGCCTCTCTCT 61.197 60.000 3.32 0.00 31.36 3.10
3314 6246 0.248843 CACAACCTGGCCTCTCTCTC 59.751 60.000 3.32 0.00 0.00 3.20
3315 6247 0.907230 ACAACCTGGCCTCTCTCTCC 60.907 60.000 3.32 0.00 0.00 3.71
3316 6248 1.306568 AACCTGGCCTCTCTCTCCC 60.307 63.158 3.32 0.00 0.00 4.30
3317 6249 1.820866 AACCTGGCCTCTCTCTCCCT 61.821 60.000 3.32 0.00 0.00 4.20
3318 6250 1.761667 CCTGGCCTCTCTCTCCCTG 60.762 68.421 3.32 0.00 0.00 4.45
3319 6251 1.761667 CTGGCCTCTCTCTCCCTGG 60.762 68.421 3.32 0.00 0.00 4.45
3320 6252 3.160748 GGCCTCTCTCTCCCTGGC 61.161 72.222 0.00 0.00 42.56 4.85
3321 6253 2.042025 GCCTCTCTCTCCCTGGCT 60.042 66.667 0.00 0.00 40.36 4.75
3322 6254 2.433994 GCCTCTCTCTCCCTGGCTG 61.434 68.421 0.00 0.00 40.36 4.85
3323 6255 1.309347 CCTCTCTCTCCCTGGCTGA 59.691 63.158 0.00 0.00 0.00 4.26
3324 6256 0.756442 CCTCTCTCTCCCTGGCTGAG 60.756 65.000 7.56 7.56 0.00 3.35
3325 6257 1.381056 TCTCTCTCCCTGGCTGAGC 60.381 63.158 0.00 0.00 0.00 4.26
3326 6258 2.757508 TCTCTCCCTGGCTGAGCG 60.758 66.667 0.00 0.00 0.00 5.03
3327 6259 4.527583 CTCTCCCTGGCTGAGCGC 62.528 72.222 0.00 0.00 38.13 5.92
3329 6261 3.150335 CTCCCTGGCTGAGCGCTA 61.150 66.667 11.50 0.00 39.13 4.26
3330 6262 3.438017 CTCCCTGGCTGAGCGCTAC 62.438 68.421 11.50 4.70 39.13 3.58
3331 6263 3.774528 CCCTGGCTGAGCGCTACA 61.775 66.667 11.50 9.77 39.13 2.74
3332 6264 2.202851 CCTGGCTGAGCGCTACAG 60.203 66.667 23.93 23.93 39.13 2.74
3333 6265 2.714991 CCTGGCTGAGCGCTACAGA 61.715 63.158 29.15 15.30 37.54 3.41
3334 6266 1.226916 CTGGCTGAGCGCTACAGAG 60.227 63.158 29.15 19.14 37.54 3.35
3335 6267 2.584694 GGCTGAGCGCTACAGAGC 60.585 66.667 29.15 23.62 46.00 4.09
3336 6268 2.584694 GCTGAGCGCTACAGAGCC 60.585 66.667 29.15 14.97 46.86 4.70
3337 6269 2.278466 CTGAGCGCTACAGAGCCG 60.278 66.667 23.94 0.52 46.86 5.52
3338 6270 4.498520 TGAGCGCTACAGAGCCGC 62.499 66.667 11.50 0.00 46.86 6.53
3361 6293 4.195334 GCGACCTCCCCATGCCAT 62.195 66.667 0.00 0.00 0.00 4.40
3362 6294 2.111878 CGACCTCCCCATGCCATC 59.888 66.667 0.00 0.00 0.00 3.51
3363 6295 2.446848 CGACCTCCCCATGCCATCT 61.447 63.158 0.00 0.00 0.00 2.90
3364 6296 1.121407 CGACCTCCCCATGCCATCTA 61.121 60.000 0.00 0.00 0.00 1.98
3365 6297 0.689623 GACCTCCCCATGCCATCTAG 59.310 60.000 0.00 0.00 0.00 2.43
3366 6298 1.377994 CCTCCCCATGCCATCTAGC 59.622 63.158 0.00 0.00 0.00 3.42
3367 6299 1.132554 CCTCCCCATGCCATCTAGCT 61.133 60.000 0.00 0.00 0.00 3.32
3368 6300 1.649321 CTCCCCATGCCATCTAGCTA 58.351 55.000 0.00 0.00 0.00 3.32
3372 6304 3.398967 TCCCCATGCCATCTAGCTAAATT 59.601 43.478 0.00 0.00 0.00 1.82
3453 6385 4.603231 TCAAAAATAATACACCGTCGGC 57.397 40.909 12.28 0.00 0.00 5.54
3454 6386 3.374678 TCAAAAATAATACACCGTCGGCC 59.625 43.478 12.28 0.00 0.00 6.13
3455 6387 1.957668 AAATAATACACCGTCGGCCC 58.042 50.000 12.28 0.00 0.00 5.80
3456 6388 0.249573 AATAATACACCGTCGGCCCG 60.250 55.000 12.28 0.00 0.00 6.13
3457 6389 2.704342 ATAATACACCGTCGGCCCGC 62.704 60.000 12.28 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
249 250 7.927048 ACAAGTTTAGCGTGAATTTCTTAACT 58.073 30.769 0.00 0.00 32.98 2.24
318 319 5.639757 TCCTAAATGTTCATCGTGCATTTG 58.360 37.500 10.75 0.00 41.25 2.32
652 1829 6.557568 TCCCAAATAAGGTGTTGTAGGAATT 58.442 36.000 0.00 0.00 0.00 2.17
804 2008 4.298332 GTTGCTGTCCACTGGTTATTTTG 58.702 43.478 0.00 0.00 0.00 2.44
921 2127 3.930848 CCAACCTTAAGTACACATCGGTC 59.069 47.826 0.97 0.00 0.00 4.79
933 2139 2.087646 GCTTGAGAGCCCAACCTTAAG 58.912 52.381 0.00 0.00 43.29 1.85
1072 2672 3.515104 CTCTCCTTCTTCTTCTCCTTGCT 59.485 47.826 0.00 0.00 0.00 3.91
1763 3911 6.071784 TGTGGAAGAACTTGGAATTGATGATG 60.072 38.462 0.00 0.00 0.00 3.07
2087 4235 1.298859 ACTTGATGCGAAGGCCGTTC 61.299 55.000 0.00 0.59 41.15 3.95
2096 4244 0.098200 CCTCGTACGACTTGATGCGA 59.902 55.000 15.28 0.00 0.00 5.10
2216 5134 2.593026 CCCTTGGAGGTGCAAAGTTTA 58.407 47.619 0.00 0.00 31.93 2.01
2297 5215 3.775654 CTGACGGCCTCAGGGGTC 61.776 72.222 19.07 10.77 42.69 4.46
2330 5248 2.694760 GCCTTCGCAGGGCTTCTTG 61.695 63.158 2.50 0.00 45.57 3.02
2435 5353 1.371558 GTTGGCCTTGTCGACTCCT 59.628 57.895 17.92 0.00 0.00 3.69
2471 5389 2.333926 CGGTCTTGTTATCGCTTCACA 58.666 47.619 0.00 0.00 0.00 3.58
2472 5390 1.060698 GCGGTCTTGTTATCGCTTCAC 59.939 52.381 0.00 0.00 44.10 3.18
2478 5409 2.599082 GACTCTTGCGGTCTTGTTATCG 59.401 50.000 0.00 0.00 0.00 2.92
2498 5429 1.205655 CGCAAGATGGAAGGAGAGTGA 59.794 52.381 0.00 0.00 43.02 3.41
2581 5512 2.028020 AGCGGTCAACCTAGGAAGAAAG 60.028 50.000 17.98 10.51 0.00 2.62
2614 5545 3.118038 TCATCTATTTTGGAACGGAGGGG 60.118 47.826 0.00 0.00 0.00 4.79
2615 5546 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2616 5547 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
2617 5548 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
2619 5550 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
2620 5551 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
2621 5552 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
2622 5553 8.893563 ATAAAGTTGGGTCATCTATTTTGGAA 57.106 30.769 0.00 0.00 0.00 3.53
2623 5554 9.403583 GTATAAAGTTGGGTCATCTATTTTGGA 57.596 33.333 0.00 0.00 0.00 3.53
2624 5555 9.184523 TGTATAAAGTTGGGTCATCTATTTTGG 57.815 33.333 0.00 0.00 0.00 3.28
2626 5557 9.747898 TGTGTATAAAGTTGGGTCATCTATTTT 57.252 29.630 0.00 0.00 0.00 1.82
2627 5558 9.747898 TTGTGTATAAAGTTGGGTCATCTATTT 57.252 29.630 0.00 0.00 0.00 1.40
2628 5559 9.747898 TTTGTGTATAAAGTTGGGTCATCTATT 57.252 29.630 0.00 0.00 0.00 1.73
2629 5560 9.396022 CTTTGTGTATAAAGTTGGGTCATCTAT 57.604 33.333 0.00 0.00 33.91 1.98
2630 5561 8.380099 ACTTTGTGTATAAAGTTGGGTCATCTA 58.620 33.333 1.52 0.00 45.85 1.98
2631 5562 7.231467 ACTTTGTGTATAAAGTTGGGTCATCT 58.769 34.615 1.52 0.00 45.85 2.90
2632 5563 7.448748 ACTTTGTGTATAAAGTTGGGTCATC 57.551 36.000 1.52 0.00 45.85 2.92
2642 5573 7.687941 AGATGACCCAACTTTGTGTATAAAG 57.312 36.000 0.00 0.00 42.09 1.85
2643 5574 9.747898 AATAGATGACCCAACTTTGTGTATAAA 57.252 29.630 0.00 0.00 0.00 1.40
2644 5575 9.747898 AAATAGATGACCCAACTTTGTGTATAA 57.252 29.630 0.00 0.00 0.00 0.98
2645 5576 9.747898 AAAATAGATGACCCAACTTTGTGTATA 57.252 29.630 0.00 0.00 0.00 1.47
2646 5577 8.522830 CAAAATAGATGACCCAACTTTGTGTAT 58.477 33.333 0.00 0.00 0.00 2.29
2647 5578 7.040062 CCAAAATAGATGACCCAACTTTGTGTA 60.040 37.037 0.00 0.00 0.00 2.90
2648 5579 6.239289 CCAAAATAGATGACCCAACTTTGTGT 60.239 38.462 0.00 0.00 0.00 3.72
2649 5580 6.015519 TCCAAAATAGATGACCCAACTTTGTG 60.016 38.462 0.00 0.00 0.00 3.33
2650 5581 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
2651 5582 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
2652 5583 6.553100 TGTTCCAAAATAGATGACCCAACTTT 59.447 34.615 0.00 0.00 0.00 2.66
2653 5584 6.074648 TGTTCCAAAATAGATGACCCAACTT 58.925 36.000 0.00 0.00 0.00 2.66
2654 5585 5.640147 TGTTCCAAAATAGATGACCCAACT 58.360 37.500 0.00 0.00 0.00 3.16
2655 5586 5.710099 TCTGTTCCAAAATAGATGACCCAAC 59.290 40.000 0.00 0.00 28.72 3.77
2656 5587 5.886609 TCTGTTCCAAAATAGATGACCCAA 58.113 37.500 0.00 0.00 28.72 4.12
2657 5588 5.500234 CTCTGTTCCAAAATAGATGACCCA 58.500 41.667 0.00 0.00 32.88 4.51
2658 5589 4.884164 CCTCTGTTCCAAAATAGATGACCC 59.116 45.833 0.00 0.00 32.88 4.46
2659 5590 4.884164 CCCTCTGTTCCAAAATAGATGACC 59.116 45.833 0.00 0.00 32.88 4.02
2660 5591 5.745227 TCCCTCTGTTCCAAAATAGATGAC 58.255 41.667 0.00 0.00 32.88 3.06
2661 5592 5.488919 ACTCCCTCTGTTCCAAAATAGATGA 59.511 40.000 0.00 0.00 32.88 2.92
2662 5593 5.749462 ACTCCCTCTGTTCCAAAATAGATG 58.251 41.667 0.00 0.00 32.88 2.90
2663 5594 7.698163 ATACTCCCTCTGTTCCAAAATAGAT 57.302 36.000 0.00 0.00 32.88 1.98
2664 5595 7.510675 AATACTCCCTCTGTTCCAAAATAGA 57.489 36.000 0.00 0.00 32.42 1.98
2665 5596 9.331282 CTAAATACTCCCTCTGTTCCAAAATAG 57.669 37.037 0.00 0.00 0.00 1.73
2666 5597 7.773690 GCTAAATACTCCCTCTGTTCCAAAATA 59.226 37.037 0.00 0.00 0.00 1.40
2667 5598 6.603599 GCTAAATACTCCCTCTGTTCCAAAAT 59.396 38.462 0.00 0.00 0.00 1.82
2668 5599 5.944007 GCTAAATACTCCCTCTGTTCCAAAA 59.056 40.000 0.00 0.00 0.00 2.44
2669 5600 5.250774 AGCTAAATACTCCCTCTGTTCCAAA 59.749 40.000 0.00 0.00 0.00 3.28
2670 5601 4.783227 AGCTAAATACTCCCTCTGTTCCAA 59.217 41.667 0.00 0.00 0.00 3.53
2671 5602 4.362677 AGCTAAATACTCCCTCTGTTCCA 58.637 43.478 0.00 0.00 0.00 3.53
2672 5603 6.127140 TGTTAGCTAAATACTCCCTCTGTTCC 60.127 42.308 7.99 0.00 0.00 3.62
2673 5604 6.757478 GTGTTAGCTAAATACTCCCTCTGTTC 59.243 42.308 7.99 0.00 0.00 3.18
2674 5605 6.212791 TGTGTTAGCTAAATACTCCCTCTGTT 59.787 38.462 7.99 0.00 30.93 3.16
2675 5606 5.720041 TGTGTTAGCTAAATACTCCCTCTGT 59.280 40.000 7.99 0.00 30.93 3.41
2676 5607 6.222038 TGTGTTAGCTAAATACTCCCTCTG 57.778 41.667 7.99 0.00 30.93 3.35
2677 5608 6.869206 TTGTGTTAGCTAAATACTCCCTCT 57.131 37.500 7.99 0.00 30.93 3.69
2678 5609 9.780186 ATATTTGTGTTAGCTAAATACTCCCTC 57.220 33.333 7.99 0.00 31.38 4.30
2721 5652 4.851639 AGTTTATGGATCAAGTGGCTCT 57.148 40.909 0.00 0.00 0.00 4.09
2761 5692 5.627367 CGGCACAAAAATCGAAAGACAAATA 59.373 36.000 0.00 0.00 46.97 1.40
2772 5703 3.119463 CAGTTTTAGCGGCACAAAAATCG 59.881 43.478 12.25 5.34 0.00 3.34
2848 5780 5.683743 GCTAAATAGTTGCAACACGTGAAAA 59.316 36.000 30.11 7.68 0.00 2.29
2884 5816 6.787722 AGTAGAACACTTTTGAGTAGCGACTC 60.788 42.308 18.98 18.98 43.09 3.36
2885 5817 4.323553 AGAACACTTTTGAGTAGCGACT 57.676 40.909 0.00 0.00 39.20 4.18
2886 5818 5.221130 AGTAGAACACTTTTGAGTAGCGAC 58.779 41.667 0.00 0.00 31.59 5.19
2887 5819 5.009310 TGAGTAGAACACTTTTGAGTAGCGA 59.991 40.000 0.00 0.00 37.72 4.93
2888 5820 5.220381 TGAGTAGAACACTTTTGAGTAGCG 58.780 41.667 0.00 0.00 37.72 4.26
2889 5821 7.478520 TTTGAGTAGAACACTTTTGAGTAGC 57.521 36.000 0.00 0.00 37.72 3.58
2891 5823 9.607988 TGAATTTGAGTAGAACACTTTTGAGTA 57.392 29.630 0.00 0.00 37.72 2.59
2892 5824 8.506168 TGAATTTGAGTAGAACACTTTTGAGT 57.494 30.769 0.00 0.00 37.72 3.41
2893 5825 9.226345 GTTGAATTTGAGTAGAACACTTTTGAG 57.774 33.333 0.00 0.00 37.72 3.02
2894 5826 8.735315 TGTTGAATTTGAGTAGAACACTTTTGA 58.265 29.630 0.00 0.00 37.72 2.69
2895 5827 8.909708 TGTTGAATTTGAGTAGAACACTTTTG 57.090 30.769 0.00 0.00 37.72 2.44
2898 5830 7.865706 ACTGTTGAATTTGAGTAGAACACTT 57.134 32.000 0.00 0.00 37.72 3.16
2899 5831 8.993121 CATACTGTTGAATTTGAGTAGAACACT 58.007 33.333 0.00 0.00 41.47 3.55
2902 5834 7.244192 GCCATACTGTTGAATTTGAGTAGAAC 58.756 38.462 0.00 0.00 0.00 3.01
2903 5835 6.374333 GGCCATACTGTTGAATTTGAGTAGAA 59.626 38.462 0.00 0.00 0.00 2.10
2904 5836 5.880332 GGCCATACTGTTGAATTTGAGTAGA 59.120 40.000 0.00 0.00 0.00 2.59
2905 5837 5.882557 AGGCCATACTGTTGAATTTGAGTAG 59.117 40.000 5.01 0.00 0.00 2.57
2906 5838 5.815581 AGGCCATACTGTTGAATTTGAGTA 58.184 37.500 5.01 0.00 0.00 2.59
2910 5842 6.757947 CCAATAAGGCCATACTGTTGAATTTG 59.242 38.462 5.01 0.00 0.00 2.32
2911 5843 6.877236 CCAATAAGGCCATACTGTTGAATTT 58.123 36.000 5.01 0.00 0.00 1.82
2957 5889 9.449719 ACAGTTGATAAATAGATCGGAAGTTTT 57.550 29.630 0.00 0.00 0.00 2.43
2958 5890 9.099454 GACAGTTGATAAATAGATCGGAAGTTT 57.901 33.333 0.00 0.00 0.00 2.66
2959 5891 8.258007 TGACAGTTGATAAATAGATCGGAAGTT 58.742 33.333 0.00 0.00 0.00 2.66
2960 5892 7.782049 TGACAGTTGATAAATAGATCGGAAGT 58.218 34.615 0.00 0.00 0.00 3.01
2961 5893 8.648557 TTGACAGTTGATAAATAGATCGGAAG 57.351 34.615 0.00 0.00 0.00 3.46
2962 5894 7.710907 CCTTGACAGTTGATAAATAGATCGGAA 59.289 37.037 0.00 0.00 0.00 4.30
2963 5895 7.147724 ACCTTGACAGTTGATAAATAGATCGGA 60.148 37.037 0.00 0.00 0.00 4.55
2964 5896 6.986817 ACCTTGACAGTTGATAAATAGATCGG 59.013 38.462 0.00 0.00 0.00 4.18
2965 5897 9.186323 CTACCTTGACAGTTGATAAATAGATCG 57.814 37.037 0.00 0.00 0.00 3.69
2971 5903 9.787435 TTTGTACTACCTTGACAGTTGATAAAT 57.213 29.630 0.00 0.00 0.00 1.40
2972 5904 9.616156 TTTTGTACTACCTTGACAGTTGATAAA 57.384 29.630 0.00 0.00 0.00 1.40
2973 5905 9.616156 TTTTTGTACTACCTTGACAGTTGATAA 57.384 29.630 0.00 0.00 0.00 1.75
3011 5943 8.701895 TGGTCTACGGATCTGAATATAACTTTT 58.298 33.333 9.00 0.00 0.00 2.27
3012 5944 8.142551 GTGGTCTACGGATCTGAATATAACTTT 58.857 37.037 9.00 0.00 0.00 2.66
3013 5945 7.255871 GGTGGTCTACGGATCTGAATATAACTT 60.256 40.741 9.00 0.00 0.00 2.66
3014 5946 6.208994 GGTGGTCTACGGATCTGAATATAACT 59.791 42.308 9.00 0.00 0.00 2.24
3015 5947 6.208994 AGGTGGTCTACGGATCTGAATATAAC 59.791 42.308 9.00 0.00 0.00 1.89
3016 5948 6.312529 AGGTGGTCTACGGATCTGAATATAA 58.687 40.000 9.00 0.00 0.00 0.98
3017 5949 5.888901 AGGTGGTCTACGGATCTGAATATA 58.111 41.667 9.00 0.00 0.00 0.86
3018 5950 4.742012 AGGTGGTCTACGGATCTGAATAT 58.258 43.478 9.00 0.00 0.00 1.28
3019 5951 4.180377 AGGTGGTCTACGGATCTGAATA 57.820 45.455 9.00 0.00 0.00 1.75
3020 5952 3.033659 AGGTGGTCTACGGATCTGAAT 57.966 47.619 9.00 0.00 0.00 2.57
3021 5953 2.526888 AGGTGGTCTACGGATCTGAA 57.473 50.000 9.00 0.00 0.00 3.02
3022 5954 2.748798 GCTAGGTGGTCTACGGATCTGA 60.749 54.545 9.00 0.00 0.00 3.27
3023 5955 1.609555 GCTAGGTGGTCTACGGATCTG 59.390 57.143 0.00 0.00 0.00 2.90
3024 5956 1.814634 CGCTAGGTGGTCTACGGATCT 60.815 57.143 0.00 0.00 0.00 2.75
3025 5957 0.592148 CGCTAGGTGGTCTACGGATC 59.408 60.000 0.00 0.00 0.00 3.36
3026 5958 0.182061 TCGCTAGGTGGTCTACGGAT 59.818 55.000 0.00 0.00 0.00 4.18
3027 5959 0.745845 GTCGCTAGGTGGTCTACGGA 60.746 60.000 0.00 0.00 0.00 4.69
3028 5960 1.726265 GTCGCTAGGTGGTCTACGG 59.274 63.158 0.00 0.00 0.00 4.02
3029 5961 1.086067 TCGTCGCTAGGTGGTCTACG 61.086 60.000 0.00 0.00 0.00 3.51
3030 5962 0.376502 GTCGTCGCTAGGTGGTCTAC 59.623 60.000 0.00 0.00 0.00 2.59
3031 5963 0.251354 AGTCGTCGCTAGGTGGTCTA 59.749 55.000 0.00 0.00 0.00 2.59
3032 5964 0.251354 TAGTCGTCGCTAGGTGGTCT 59.749 55.000 0.00 0.00 0.00 3.85
3033 5965 0.376502 GTAGTCGTCGCTAGGTGGTC 59.623 60.000 0.00 0.00 0.00 4.02
3034 5966 0.321919 TGTAGTCGTCGCTAGGTGGT 60.322 55.000 0.00 0.00 0.00 4.16
3035 5967 0.806868 TTGTAGTCGTCGCTAGGTGG 59.193 55.000 0.00 0.00 0.00 4.61
3036 5968 1.794437 GCTTGTAGTCGTCGCTAGGTG 60.794 57.143 0.00 0.00 0.00 4.00
3037 5969 0.450983 GCTTGTAGTCGTCGCTAGGT 59.549 55.000 0.00 0.00 0.00 3.08
3038 5970 0.450583 TGCTTGTAGTCGTCGCTAGG 59.549 55.000 0.00 0.00 0.00 3.02
3039 5971 1.130749 AGTGCTTGTAGTCGTCGCTAG 59.869 52.381 0.00 0.00 0.00 3.42
3040 5972 1.135774 CAGTGCTTGTAGTCGTCGCTA 60.136 52.381 0.00 0.00 0.00 4.26
3041 5973 0.387367 CAGTGCTTGTAGTCGTCGCT 60.387 55.000 0.00 0.00 0.00 4.93
3042 5974 1.344942 CCAGTGCTTGTAGTCGTCGC 61.345 60.000 0.00 0.00 0.00 5.19
3043 5975 0.240145 TCCAGTGCTTGTAGTCGTCG 59.760 55.000 0.00 0.00 0.00 5.12
3044 5976 1.983972 CTCCAGTGCTTGTAGTCGTC 58.016 55.000 0.00 0.00 0.00 4.20
3045 5977 0.038159 GCTCCAGTGCTTGTAGTCGT 60.038 55.000 0.00 0.00 0.00 4.34
3046 5978 1.073216 CGCTCCAGTGCTTGTAGTCG 61.073 60.000 0.00 0.00 0.00 4.18
3047 5979 0.243907 TCGCTCCAGTGCTTGTAGTC 59.756 55.000 0.00 0.00 0.00 2.59
3048 5980 0.244994 CTCGCTCCAGTGCTTGTAGT 59.755 55.000 0.00 0.00 0.00 2.73
3049 5981 1.080995 GCTCGCTCCAGTGCTTGTAG 61.081 60.000 0.00 0.00 0.00 2.74
3050 5982 1.079819 GCTCGCTCCAGTGCTTGTA 60.080 57.895 0.00 0.00 0.00 2.41
3051 5983 2.358003 GCTCGCTCCAGTGCTTGT 60.358 61.111 0.00 0.00 0.00 3.16
3052 5984 3.123620 GGCTCGCTCCAGTGCTTG 61.124 66.667 0.00 0.00 0.00 4.01
3053 5985 4.749310 CGGCTCGCTCCAGTGCTT 62.749 66.667 0.00 0.00 0.00 3.91
3055 5987 4.742201 TTCGGCTCGCTCCAGTGC 62.742 66.667 0.00 0.00 0.00 4.40
3056 5988 2.507992 CTTCGGCTCGCTCCAGTG 60.508 66.667 0.00 0.00 0.00 3.66
3057 5989 3.764466 CCTTCGGCTCGCTCCAGT 61.764 66.667 0.00 0.00 0.00 4.00
3076 6008 4.796231 GAGCGATGACGGCGGTGT 62.796 66.667 13.24 0.00 39.81 4.16
3077 6009 3.989698 AAGAGCGATGACGGCGGTG 62.990 63.158 13.24 0.00 39.81 4.94
3078 6010 3.701604 GAAGAGCGATGACGGCGGT 62.702 63.158 13.24 0.00 42.69 5.68
3079 6011 2.060004 TAGAAGAGCGATGACGGCGG 62.060 60.000 13.24 0.00 40.15 6.13
3080 6012 0.039978 ATAGAAGAGCGATGACGGCG 60.040 55.000 4.80 4.80 40.15 6.46
3081 6013 1.001268 TGATAGAAGAGCGATGACGGC 60.001 52.381 0.00 0.00 40.15 5.68
3082 6014 2.292016 AGTGATAGAAGAGCGATGACGG 59.708 50.000 0.00 0.00 40.15 4.79
3083 6015 3.295785 CAGTGATAGAAGAGCGATGACG 58.704 50.000 0.00 0.00 42.93 4.35
3084 6016 3.316588 TCCAGTGATAGAAGAGCGATGAC 59.683 47.826 0.00 0.00 0.00 3.06
3085 6017 3.555966 TCCAGTGATAGAAGAGCGATGA 58.444 45.455 0.00 0.00 0.00 2.92
3086 6018 3.856638 GCTCCAGTGATAGAAGAGCGATG 60.857 52.174 0.00 0.00 40.43 3.84
3087 6019 2.295909 GCTCCAGTGATAGAAGAGCGAT 59.704 50.000 0.00 0.00 40.43 4.58
3088 6020 1.678627 GCTCCAGTGATAGAAGAGCGA 59.321 52.381 0.00 0.00 40.43 4.93
3089 6021 2.132740 GCTCCAGTGATAGAAGAGCG 57.867 55.000 0.00 0.00 40.43 5.03
3091 6023 3.255642 GCCTAGCTCCAGTGATAGAAGAG 59.744 52.174 0.00 0.00 0.00 2.85
3092 6024 3.226777 GCCTAGCTCCAGTGATAGAAGA 58.773 50.000 0.00 0.00 0.00 2.87
3093 6025 2.961741 TGCCTAGCTCCAGTGATAGAAG 59.038 50.000 0.00 0.00 0.00 2.85
3094 6026 3.032265 TGCCTAGCTCCAGTGATAGAA 57.968 47.619 0.00 0.00 0.00 2.10
3095 6027 2.755952 TGCCTAGCTCCAGTGATAGA 57.244 50.000 0.00 0.00 0.00 1.98
3096 6028 3.462021 GTTTGCCTAGCTCCAGTGATAG 58.538 50.000 0.00 0.00 0.00 2.08
3097 6029 2.170607 GGTTTGCCTAGCTCCAGTGATA 59.829 50.000 0.00 0.00 0.00 2.15
3098 6030 1.065126 GGTTTGCCTAGCTCCAGTGAT 60.065 52.381 0.00 0.00 0.00 3.06
3099 6031 0.324943 GGTTTGCCTAGCTCCAGTGA 59.675 55.000 0.00 0.00 0.00 3.41
3100 6032 0.326264 AGGTTTGCCTAGCTCCAGTG 59.674 55.000 0.00 0.00 44.90 3.66
3101 6033 1.068121 AAGGTTTGCCTAGCTCCAGT 58.932 50.000 0.00 0.00 46.33 4.00
3102 6034 3.135530 AGATAAGGTTTGCCTAGCTCCAG 59.864 47.826 0.00 0.00 46.33 3.86
3103 6035 3.115390 AGATAAGGTTTGCCTAGCTCCA 58.885 45.455 0.00 0.00 46.33 3.86
3104 6036 3.847671 AGATAAGGTTTGCCTAGCTCC 57.152 47.619 0.00 0.00 46.33 4.70
3105 6037 8.536175 AGATTATAGATAAGGTTTGCCTAGCTC 58.464 37.037 0.00 0.00 46.33 4.09
3106 6038 8.442660 AGATTATAGATAAGGTTTGCCTAGCT 57.557 34.615 0.00 0.00 46.33 3.32
3156 6088 9.846248 GTTGCATGTCAAGAGAAATAAAATAGT 57.154 29.630 3.27 0.00 34.91 2.12
3157 6089 9.294030 GGTTGCATGTCAAGAGAAATAAAATAG 57.706 33.333 3.27 0.00 34.91 1.73
3158 6090 9.023962 AGGTTGCATGTCAAGAGAAATAAAATA 57.976 29.630 3.27 0.00 34.91 1.40
3159 6091 7.899973 AGGTTGCATGTCAAGAGAAATAAAAT 58.100 30.769 3.27 0.00 34.91 1.82
3160 6092 7.288810 AGGTTGCATGTCAAGAGAAATAAAA 57.711 32.000 3.27 0.00 34.91 1.52
3161 6093 6.899393 AGGTTGCATGTCAAGAGAAATAAA 57.101 33.333 3.27 0.00 34.91 1.40
3162 6094 7.283127 GGATAGGTTGCATGTCAAGAGAAATAA 59.717 37.037 3.27 0.00 34.91 1.40
3163 6095 6.767902 GGATAGGTTGCATGTCAAGAGAAATA 59.232 38.462 3.27 0.00 34.91 1.40
3164 6096 5.591877 GGATAGGTTGCATGTCAAGAGAAAT 59.408 40.000 3.27 0.00 34.91 2.17
3165 6097 4.943705 GGATAGGTTGCATGTCAAGAGAAA 59.056 41.667 3.27 0.00 34.91 2.52
3166 6098 4.019411 TGGATAGGTTGCATGTCAAGAGAA 60.019 41.667 3.27 0.00 34.91 2.87
3167 6099 3.519107 TGGATAGGTTGCATGTCAAGAGA 59.481 43.478 3.27 0.00 34.91 3.10
3168 6100 3.624861 GTGGATAGGTTGCATGTCAAGAG 59.375 47.826 3.27 0.00 34.91 2.85
3169 6101 3.609853 GTGGATAGGTTGCATGTCAAGA 58.390 45.455 3.27 0.00 34.91 3.02
3170 6102 2.684881 GGTGGATAGGTTGCATGTCAAG 59.315 50.000 3.27 0.00 34.91 3.02
3171 6103 2.308570 AGGTGGATAGGTTGCATGTCAA 59.691 45.455 0.00 0.00 0.00 3.18
3172 6104 1.915489 AGGTGGATAGGTTGCATGTCA 59.085 47.619 0.00 0.00 0.00 3.58
3173 6105 2.092968 TGAGGTGGATAGGTTGCATGTC 60.093 50.000 0.00 0.00 0.00 3.06
3174 6106 1.915489 TGAGGTGGATAGGTTGCATGT 59.085 47.619 0.00 0.00 0.00 3.21
3175 6107 2.715749 TGAGGTGGATAGGTTGCATG 57.284 50.000 0.00 0.00 0.00 4.06
3176 6108 2.779430 TGATGAGGTGGATAGGTTGCAT 59.221 45.455 0.00 0.00 0.00 3.96
3177 6109 2.195727 TGATGAGGTGGATAGGTTGCA 58.804 47.619 0.00 0.00 0.00 4.08
3178 6110 3.281727 TTGATGAGGTGGATAGGTTGC 57.718 47.619 0.00 0.00 0.00 4.17
3179 6111 3.947834 GGTTTGATGAGGTGGATAGGTTG 59.052 47.826 0.00 0.00 0.00 3.77
3180 6112 3.852578 AGGTTTGATGAGGTGGATAGGTT 59.147 43.478 0.00 0.00 0.00 3.50
3181 6113 3.200825 CAGGTTTGATGAGGTGGATAGGT 59.799 47.826 0.00 0.00 0.00 3.08
3182 6114 3.813443 CAGGTTTGATGAGGTGGATAGG 58.187 50.000 0.00 0.00 0.00 2.57
3183 6115 3.209410 GCAGGTTTGATGAGGTGGATAG 58.791 50.000 0.00 0.00 0.00 2.08
3184 6116 2.092429 GGCAGGTTTGATGAGGTGGATA 60.092 50.000 0.00 0.00 0.00 2.59
3185 6117 1.341383 GGCAGGTTTGATGAGGTGGAT 60.341 52.381 0.00 0.00 0.00 3.41
3186 6118 0.038166 GGCAGGTTTGATGAGGTGGA 59.962 55.000 0.00 0.00 0.00 4.02
3187 6119 0.251297 TGGCAGGTTTGATGAGGTGG 60.251 55.000 0.00 0.00 0.00 4.61
3188 6120 0.883833 GTGGCAGGTTTGATGAGGTG 59.116 55.000 0.00 0.00 0.00 4.00
3189 6121 0.478072 TGTGGCAGGTTTGATGAGGT 59.522 50.000 0.00 0.00 0.00 3.85
3190 6122 1.747355 GATGTGGCAGGTTTGATGAGG 59.253 52.381 0.00 0.00 0.00 3.86
3191 6123 2.422479 CTGATGTGGCAGGTTTGATGAG 59.578 50.000 0.00 0.00 32.26 2.90
3192 6124 2.439409 CTGATGTGGCAGGTTTGATGA 58.561 47.619 0.00 0.00 32.26 2.92
3193 6125 1.135199 GCTGATGTGGCAGGTTTGATG 60.135 52.381 0.00 0.00 36.41 3.07
3194 6126 1.180029 GCTGATGTGGCAGGTTTGAT 58.820 50.000 0.00 0.00 36.41 2.57
3195 6127 0.178995 TGCTGATGTGGCAGGTTTGA 60.179 50.000 0.00 0.00 36.41 2.69
3196 6128 0.892755 ATGCTGATGTGGCAGGTTTG 59.107 50.000 0.00 0.00 43.15 2.93
3197 6129 1.547372 GAATGCTGATGTGGCAGGTTT 59.453 47.619 0.00 0.00 43.15 3.27
3198 6130 1.180029 GAATGCTGATGTGGCAGGTT 58.820 50.000 0.00 0.00 43.15 3.50
3199 6131 0.330604 AGAATGCTGATGTGGCAGGT 59.669 50.000 0.00 0.00 43.15 4.00
3200 6132 1.471119 AAGAATGCTGATGTGGCAGG 58.529 50.000 0.00 0.00 43.15 4.85
3201 6133 2.490509 TGAAAGAATGCTGATGTGGCAG 59.509 45.455 0.00 0.00 43.15 4.85
3202 6134 2.490509 CTGAAAGAATGCTGATGTGGCA 59.509 45.455 0.00 0.00 39.47 4.92
3203 6135 2.490903 ACTGAAAGAATGCTGATGTGGC 59.509 45.455 0.00 0.00 37.43 5.01
3204 6136 3.754850 TCACTGAAAGAATGCTGATGTGG 59.245 43.478 0.00 0.00 37.43 4.17
3205 6137 4.454847 AGTCACTGAAAGAATGCTGATGTG 59.545 41.667 0.00 0.00 37.43 3.21
3206 6138 4.649692 AGTCACTGAAAGAATGCTGATGT 58.350 39.130 0.00 0.00 37.43 3.06
3207 6139 5.624344 AAGTCACTGAAAGAATGCTGATG 57.376 39.130 0.00 0.00 37.43 3.07
3208 6140 6.233434 TGTAAGTCACTGAAAGAATGCTGAT 58.767 36.000 0.00 0.00 37.43 2.90
3209 6141 5.610398 TGTAAGTCACTGAAAGAATGCTGA 58.390 37.500 0.00 0.00 37.43 4.26
3210 6142 5.929697 TGTAAGTCACTGAAAGAATGCTG 57.070 39.130 0.00 0.00 37.43 4.41
3211 6143 7.281774 CCATATGTAAGTCACTGAAAGAATGCT 59.718 37.037 1.24 0.00 37.43 3.79
3212 6144 7.412853 CCATATGTAAGTCACTGAAAGAATGC 58.587 38.462 1.24 0.00 37.43 3.56
3213 6145 7.770433 TCCCATATGTAAGTCACTGAAAGAATG 59.230 37.037 1.24 0.00 37.43 2.67
3214 6146 7.770897 GTCCCATATGTAAGTCACTGAAAGAAT 59.229 37.037 1.24 0.00 37.43 2.40
3215 6147 7.103641 GTCCCATATGTAAGTCACTGAAAGAA 58.896 38.462 1.24 0.00 37.43 2.52
3216 6148 6.351881 GGTCCCATATGTAAGTCACTGAAAGA 60.352 42.308 1.24 0.00 37.43 2.52
3217 6149 5.817816 GGTCCCATATGTAAGTCACTGAAAG 59.182 44.000 1.24 0.00 42.29 2.62
3218 6150 5.249622 TGGTCCCATATGTAAGTCACTGAAA 59.750 40.000 1.24 0.00 0.00 2.69
3219 6151 4.780554 TGGTCCCATATGTAAGTCACTGAA 59.219 41.667 1.24 0.00 0.00 3.02
3220 6152 4.358214 TGGTCCCATATGTAAGTCACTGA 58.642 43.478 1.24 0.00 0.00 3.41
3221 6153 4.697514 CTGGTCCCATATGTAAGTCACTG 58.302 47.826 1.24 0.00 0.00 3.66
3222 6154 3.134804 GCTGGTCCCATATGTAAGTCACT 59.865 47.826 1.24 0.00 0.00 3.41
3223 6155 3.467803 GCTGGTCCCATATGTAAGTCAC 58.532 50.000 1.24 0.00 0.00 3.67
3224 6156 2.438021 GGCTGGTCCCATATGTAAGTCA 59.562 50.000 1.24 0.00 0.00 3.41
3225 6157 2.438021 TGGCTGGTCCCATATGTAAGTC 59.562 50.000 1.24 0.00 0.00 3.01
3226 6158 2.172717 GTGGCTGGTCCCATATGTAAGT 59.827 50.000 1.24 0.00 37.20 2.24
3227 6159 2.439507 AGTGGCTGGTCCCATATGTAAG 59.560 50.000 1.24 0.00 37.20 2.34
3228 6160 2.487775 AGTGGCTGGTCCCATATGTAA 58.512 47.619 1.24 0.00 37.20 2.41
3229 6161 2.190398 AGTGGCTGGTCCCATATGTA 57.810 50.000 1.24 0.00 37.20 2.29
3230 6162 1.768870 GTAGTGGCTGGTCCCATATGT 59.231 52.381 1.24 0.00 37.20 2.29
3231 6163 1.768275 TGTAGTGGCTGGTCCCATATG 59.232 52.381 0.00 0.00 37.20 1.78
3232 6164 2.050144 CTGTAGTGGCTGGTCCCATAT 58.950 52.381 0.00 0.00 37.20 1.78
3233 6165 1.496060 CTGTAGTGGCTGGTCCCATA 58.504 55.000 0.00 0.00 37.20 2.74
3234 6166 1.915078 GCTGTAGTGGCTGGTCCCAT 61.915 60.000 0.00 0.00 37.20 4.00
3235 6167 2.592993 GCTGTAGTGGCTGGTCCCA 61.593 63.158 0.00 0.00 0.00 4.37
3236 6168 2.269241 GCTGTAGTGGCTGGTCCC 59.731 66.667 0.00 0.00 0.00 4.46
3237 6169 1.376037 GTGCTGTAGTGGCTGGTCC 60.376 63.158 0.00 0.00 0.00 4.46
3238 6170 1.376037 GGTGCTGTAGTGGCTGGTC 60.376 63.158 0.00 0.00 0.00 4.02
3239 6171 2.750350 GGTGCTGTAGTGGCTGGT 59.250 61.111 0.00 0.00 0.00 4.00
3240 6172 2.045926 GGGTGCTGTAGTGGCTGG 60.046 66.667 0.00 0.00 0.00 4.85
3241 6173 2.045926 GGGGTGCTGTAGTGGCTG 60.046 66.667 0.00 0.00 0.00 4.85
3242 6174 2.203998 AGGGGTGCTGTAGTGGCT 60.204 61.111 0.00 0.00 0.00 4.75
3243 6175 2.045926 CAGGGGTGCTGTAGTGGC 60.046 66.667 0.00 0.00 0.00 5.01
3244 6176 2.045926 GCAGGGGTGCTGTAGTGG 60.046 66.667 0.00 0.00 0.00 4.00
3245 6177 2.045926 GGCAGGGGTGCTGTAGTG 60.046 66.667 0.00 0.00 34.73 2.74
3246 6178 2.529136 TGGCAGGGGTGCTGTAGT 60.529 61.111 0.00 0.00 34.73 2.73
3247 6179 2.045926 GTGGCAGGGGTGCTGTAG 60.046 66.667 0.00 0.00 34.73 2.74
3248 6180 0.912006 TATGTGGCAGGGGTGCTGTA 60.912 55.000 0.00 0.00 34.73 2.74
3249 6181 1.788518 TTATGTGGCAGGGGTGCTGT 61.789 55.000 0.00 0.00 34.73 4.40
3250 6182 1.001020 TTATGTGGCAGGGGTGCTG 60.001 57.895 0.00 0.00 34.73 4.41
3251 6183 1.304282 CTTATGTGGCAGGGGTGCT 59.696 57.895 0.00 0.00 34.73 4.40
3252 6184 2.418083 GCTTATGTGGCAGGGGTGC 61.418 63.158 0.00 0.00 0.00 5.01
3253 6185 0.323725 AAGCTTATGTGGCAGGGGTG 60.324 55.000 0.00 0.00 0.00 4.61
3254 6186 0.034089 GAAGCTTATGTGGCAGGGGT 60.034 55.000 0.00 0.00 0.00 4.95
3255 6187 0.034186 TGAAGCTTATGTGGCAGGGG 60.034 55.000 0.00 0.00 0.00 4.79
3256 6188 1.838112 TTGAAGCTTATGTGGCAGGG 58.162 50.000 0.00 0.00 0.00 4.45
3257 6189 4.460948 AAATTGAAGCTTATGTGGCAGG 57.539 40.909 0.00 0.00 0.00 4.85
3258 6190 6.019318 GCAATAAATTGAAGCTTATGTGGCAG 60.019 38.462 0.00 0.00 40.14 4.85
3259 6191 5.811613 GCAATAAATTGAAGCTTATGTGGCA 59.188 36.000 0.00 0.00 40.14 4.92
3260 6192 6.044682 AGCAATAAATTGAAGCTTATGTGGC 58.955 36.000 0.00 0.00 40.14 5.01
3261 6193 9.241317 CTTAGCAATAAATTGAAGCTTATGTGG 57.759 33.333 0.00 0.00 40.14 4.17
3262 6194 9.241317 CCTTAGCAATAAATTGAAGCTTATGTG 57.759 33.333 0.00 0.00 40.14 3.21
3263 6195 9.189156 TCCTTAGCAATAAATTGAAGCTTATGT 57.811 29.630 0.00 0.00 40.14 2.29
3264 6196 9.455847 GTCCTTAGCAATAAATTGAAGCTTATG 57.544 33.333 0.00 0.00 40.14 1.90
3265 6197 8.633561 GGTCCTTAGCAATAAATTGAAGCTTAT 58.366 33.333 0.00 0.00 40.14 1.73
3266 6198 7.068226 GGGTCCTTAGCAATAAATTGAAGCTTA 59.932 37.037 0.00 0.00 40.14 3.09
3267 6199 6.127338 GGGTCCTTAGCAATAAATTGAAGCTT 60.127 38.462 0.00 0.00 40.14 3.74
3268 6200 5.360999 GGGTCCTTAGCAATAAATTGAAGCT 59.639 40.000 6.87 0.00 40.14 3.74
3269 6201 5.127031 TGGGTCCTTAGCAATAAATTGAAGC 59.873 40.000 6.87 0.00 40.14 3.86
3270 6202 6.405842 GGTGGGTCCTTAGCAATAAATTGAAG 60.406 42.308 6.87 2.73 40.14 3.02
3271 6203 5.420739 GGTGGGTCCTTAGCAATAAATTGAA 59.579 40.000 6.87 0.00 40.14 2.69
3272 6204 4.953579 GGTGGGTCCTTAGCAATAAATTGA 59.046 41.667 6.87 0.00 40.14 2.57
3273 6205 4.709397 TGGTGGGTCCTTAGCAATAAATTG 59.291 41.667 0.00 0.00 37.70 2.32
3274 6206 4.709886 GTGGTGGGTCCTTAGCAATAAATT 59.290 41.667 1.08 0.00 37.07 1.82
3275 6207 4.264172 TGTGGTGGGTCCTTAGCAATAAAT 60.264 41.667 1.08 0.00 37.07 1.40
3276 6208 3.074687 TGTGGTGGGTCCTTAGCAATAAA 59.925 43.478 1.08 0.00 37.07 1.40
3277 6209 2.645297 TGTGGTGGGTCCTTAGCAATAA 59.355 45.455 1.08 0.00 37.07 1.40
3278 6210 2.270858 TGTGGTGGGTCCTTAGCAATA 58.729 47.619 1.08 0.00 37.07 1.90
3279 6211 1.072266 TGTGGTGGGTCCTTAGCAAT 58.928 50.000 1.08 0.00 37.07 3.56
3280 6212 0.847373 TTGTGGTGGGTCCTTAGCAA 59.153 50.000 1.08 0.00 37.07 3.91
3281 6213 0.109723 GTTGTGGTGGGTCCTTAGCA 59.890 55.000 0.00 0.00 37.07 3.49
3282 6214 0.608308 GGTTGTGGTGGGTCCTTAGC 60.608 60.000 0.00 0.00 37.07 3.09
3283 6215 1.064825 AGGTTGTGGTGGGTCCTTAG 58.935 55.000 0.00 0.00 37.07 2.18
3284 6216 0.768622 CAGGTTGTGGTGGGTCCTTA 59.231 55.000 0.00 0.00 37.07 2.69
3285 6217 1.536676 CAGGTTGTGGTGGGTCCTT 59.463 57.895 0.00 0.00 37.07 3.36
3286 6218 2.460853 CCAGGTTGTGGTGGGTCCT 61.461 63.158 0.00 0.00 42.17 3.85
3287 6219 2.115266 CCAGGTTGTGGTGGGTCC 59.885 66.667 0.00 0.00 42.17 4.46
3295 6227 0.248843 GAGAGAGAGGCCAGGTTGTG 59.751 60.000 5.01 0.00 0.00 3.33
3296 6228 0.907230 GGAGAGAGAGGCCAGGTTGT 60.907 60.000 5.01 0.00 0.00 3.32
3297 6229 1.621672 GGGAGAGAGAGGCCAGGTTG 61.622 65.000 5.01 0.00 0.00 3.77
3298 6230 1.306568 GGGAGAGAGAGGCCAGGTT 60.307 63.158 5.01 0.00 0.00 3.50
3299 6231 2.252898 AGGGAGAGAGAGGCCAGGT 61.253 63.158 5.01 0.00 0.00 4.00
3300 6232 1.761667 CAGGGAGAGAGAGGCCAGG 60.762 68.421 5.01 0.00 0.00 4.45
3301 6233 1.761667 CCAGGGAGAGAGAGGCCAG 60.762 68.421 5.01 0.00 0.00 4.85
3302 6234 2.366167 CCAGGGAGAGAGAGGCCA 59.634 66.667 5.01 0.00 0.00 5.36
3303 6235 3.160748 GCCAGGGAGAGAGAGGCC 61.161 72.222 0.00 0.00 39.42 5.19
3304 6236 2.042025 AGCCAGGGAGAGAGAGGC 60.042 66.667 0.00 0.00 45.54 4.70
3305 6237 0.756442 CTCAGCCAGGGAGAGAGAGG 60.756 65.000 3.03 0.00 34.24 3.69
3306 6238 1.394266 GCTCAGCCAGGGAGAGAGAG 61.394 65.000 11.07 0.00 34.24 3.20
3307 6239 1.381056 GCTCAGCCAGGGAGAGAGA 60.381 63.158 11.07 0.00 34.24 3.10
3308 6240 2.784356 CGCTCAGCCAGGGAGAGAG 61.784 68.421 11.07 5.35 37.22 3.20
3309 6241 2.757508 CGCTCAGCCAGGGAGAGA 60.758 66.667 11.07 0.00 37.22 3.10
3310 6242 4.527583 GCGCTCAGCCAGGGAGAG 62.528 72.222 0.00 4.43 40.81 3.20
3344 6276 4.195334 ATGGCATGGGGAGGTCGC 62.195 66.667 0.00 0.00 0.00 5.19
3345 6277 1.121407 TAGATGGCATGGGGAGGTCG 61.121 60.000 3.81 0.00 0.00 4.79
3346 6278 0.689623 CTAGATGGCATGGGGAGGTC 59.310 60.000 3.81 0.00 0.00 3.85
3347 6279 1.422161 GCTAGATGGCATGGGGAGGT 61.422 60.000 3.81 0.00 0.00 3.85
3348 6280 1.132554 AGCTAGATGGCATGGGGAGG 61.133 60.000 3.81 0.00 34.17 4.30
3349 6281 1.649321 TAGCTAGATGGCATGGGGAG 58.351 55.000 3.81 0.00 34.17 4.30
3350 6282 2.116869 TTAGCTAGATGGCATGGGGA 57.883 50.000 3.81 0.00 34.17 4.81
3351 6283 2.957402 TTTAGCTAGATGGCATGGGG 57.043 50.000 3.81 0.00 34.17 4.96
3352 6284 5.796424 AAAATTTAGCTAGATGGCATGGG 57.204 39.130 3.81 0.00 34.17 4.00
3435 6367 2.291365 GGGCCGACGGTGTATTATTTT 58.709 47.619 16.73 0.00 0.00 1.82
3436 6368 1.807377 CGGGCCGACGGTGTATTATTT 60.807 52.381 24.41 0.00 0.00 1.40
3437 6369 0.249573 CGGGCCGACGGTGTATTATT 60.250 55.000 24.41 0.00 0.00 1.40
3440 6372 4.825252 GCGGGCCGACGGTGTATT 62.825 66.667 33.44 0.00 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.