Multiple sequence alignment - TraesCS7D01G397100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G397100 chr7D 100.000 3715 0 0 1 3715 511686702 511690416 0.000000e+00 6861.0
1 TraesCS7D01G397100 chr7D 93.587 1918 110 6 944 2848 511662123 511664040 0.000000e+00 2848.0
2 TraesCS7D01G397100 chr7D 97.804 501 6 3 1 496 169016911 169017411 0.000000e+00 859.0
3 TraesCS7D01G397100 chr7D 97.800 500 7 4 1 496 529417863 529418362 0.000000e+00 859.0
4 TraesCS7D01G397100 chr7D 97.416 503 6 2 1 496 106792511 106793013 0.000000e+00 850.0
5 TraesCS7D01G397100 chr7D 79.870 308 48 9 498 792 31382163 31381857 2.910000e-51 213.0
6 TraesCS7D01G397100 chr7B 95.988 2642 80 14 967 3600 540865695 540868318 0.000000e+00 4268.0
7 TraesCS7D01G397100 chr7B 93.472 1930 102 8 943 2848 540801028 540802957 0.000000e+00 2844.0
8 TraesCS7D01G397100 chr7B 88.462 52 5 1 2403 2454 246386172 246386122 1.110000e-05 62.1
9 TraesCS7D01G397100 chr7A 95.152 1774 72 9 944 2703 584204007 584202234 0.000000e+00 2787.0
10 TraesCS7D01G397100 chr7A 91.956 2014 121 19 943 2923 584108222 584110227 0.000000e+00 2784.0
11 TraesCS7D01G397100 chr5D 97.822 505 6 5 1 500 548051871 548051367 0.000000e+00 867.0
12 TraesCS7D01G397100 chr5D 82.399 642 106 6 3075 3715 424766424 424765789 1.510000e-153 553.0
13 TraesCS7D01G397100 chr3D 97.800 500 7 3 1 496 15234123 15234622 0.000000e+00 859.0
14 TraesCS7D01G397100 chr1D 97.787 497 10 1 1 496 376759089 376759585 0.000000e+00 856.0
15 TraesCS7D01G397100 chr1D 79.447 1012 143 28 1712 2710 356830200 356829241 0.000000e+00 656.0
16 TraesCS7D01G397100 chr2D 97.600 500 7 3 1 496 485108109 485108607 0.000000e+00 852.0
17 TraesCS7D01G397100 chr2D 81.045 670 118 8 3046 3715 316242165 316242825 3.290000e-145 525.0
18 TraesCS7D01G397100 chr4D 97.400 500 9 2 1 496 508047732 508048231 0.000000e+00 848.0
19 TraesCS7D01G397100 chr4D 97.030 505 9 4 1 499 262796472 262795968 0.000000e+00 845.0
20 TraesCS7D01G397100 chr3A 83.003 706 106 9 3010 3711 357114765 357115460 8.760000e-176 627.0
21 TraesCS7D01G397100 chr1A 83.359 637 92 11 3084 3715 454741367 454740740 8.950000e-161 577.0
22 TraesCS7D01G397100 chr1A 74.739 1053 177 42 1667 2711 516234772 516235743 4.500000e-104 388.0
23 TraesCS7D01G397100 chr6D 81.991 683 109 13 3025 3704 144107946 144107275 5.380000e-158 568.0
24 TraesCS7D01G397100 chr5A 84.130 586 80 10 3132 3715 408178608 408179182 4.190000e-154 555.0
25 TraesCS7D01G397100 chr5A 81.176 680 103 15 3046 3715 42252642 42251978 1.180000e-144 523.0
26 TraesCS7D01G397100 chr6B 80.664 693 104 22 3031 3715 694262609 694261939 9.200000e-141 510.0
27 TraesCS7D01G397100 chr6B 86.792 159 21 0 505 663 23403927 23404085 1.060000e-40 178.0
28 TraesCS7D01G397100 chr6A 81.050 343 50 8 498 828 459071800 459071461 3.680000e-65 259.0
29 TraesCS7D01G397100 chr6A 77.804 428 72 17 508 921 573453520 573453938 3.710000e-60 243.0
30 TraesCS7D01G397100 chr5B 78.140 430 74 12 498 916 73390629 73391049 4.760000e-64 255.0
31 TraesCS7D01G397100 chr5B 74.151 383 46 27 1780 2148 115647264 115646921 3.920000e-20 110.0
32 TraesCS7D01G397100 chr1B 78.060 433 72 16 498 915 427598943 427599367 6.160000e-63 252.0
33 TraesCS7D01G397100 chr2B 75.632 435 76 17 498 917 67393554 67393973 4.900000e-44 189.0
34 TraesCS7D01G397100 chr3B 77.152 302 55 7 498 787 617271242 617270943 2.970000e-36 163.0
35 TraesCS7D01G397100 chr4A 87.097 62 8 0 500 561 595646371 595646432 1.850000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G397100 chr7D 511686702 511690416 3714 False 6861 6861 100.000 1 3715 1 chr7D.!!$F4 3714
1 TraesCS7D01G397100 chr7D 511662123 511664040 1917 False 2848 2848 93.587 944 2848 1 chr7D.!!$F3 1904
2 TraesCS7D01G397100 chr7D 169016911 169017411 500 False 859 859 97.804 1 496 1 chr7D.!!$F2 495
3 TraesCS7D01G397100 chr7D 106792511 106793013 502 False 850 850 97.416 1 496 1 chr7D.!!$F1 495
4 TraesCS7D01G397100 chr7B 540865695 540868318 2623 False 4268 4268 95.988 967 3600 1 chr7B.!!$F2 2633
5 TraesCS7D01G397100 chr7B 540801028 540802957 1929 False 2844 2844 93.472 943 2848 1 chr7B.!!$F1 1905
6 TraesCS7D01G397100 chr7A 584202234 584204007 1773 True 2787 2787 95.152 944 2703 1 chr7A.!!$R1 1759
7 TraesCS7D01G397100 chr7A 584108222 584110227 2005 False 2784 2784 91.956 943 2923 1 chr7A.!!$F1 1980
8 TraesCS7D01G397100 chr5D 548051367 548051871 504 True 867 867 97.822 1 500 1 chr5D.!!$R2 499
9 TraesCS7D01G397100 chr5D 424765789 424766424 635 True 553 553 82.399 3075 3715 1 chr5D.!!$R1 640
10 TraesCS7D01G397100 chr1D 356829241 356830200 959 True 656 656 79.447 1712 2710 1 chr1D.!!$R1 998
11 TraesCS7D01G397100 chr2D 316242165 316242825 660 False 525 525 81.045 3046 3715 1 chr2D.!!$F1 669
12 TraesCS7D01G397100 chr4D 262795968 262796472 504 True 845 845 97.030 1 499 1 chr4D.!!$R1 498
13 TraesCS7D01G397100 chr3A 357114765 357115460 695 False 627 627 83.003 3010 3711 1 chr3A.!!$F1 701
14 TraesCS7D01G397100 chr1A 454740740 454741367 627 True 577 577 83.359 3084 3715 1 chr1A.!!$R1 631
15 TraesCS7D01G397100 chr1A 516234772 516235743 971 False 388 388 74.739 1667 2711 1 chr1A.!!$F1 1044
16 TraesCS7D01G397100 chr6D 144107275 144107946 671 True 568 568 81.991 3025 3704 1 chr6D.!!$R1 679
17 TraesCS7D01G397100 chr5A 408178608 408179182 574 False 555 555 84.130 3132 3715 1 chr5A.!!$F1 583
18 TraesCS7D01G397100 chr5A 42251978 42252642 664 True 523 523 81.176 3046 3715 1 chr5A.!!$R1 669
19 TraesCS7D01G397100 chr6B 694261939 694262609 670 True 510 510 80.664 3031 3715 1 chr6B.!!$R1 684

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
715 723 0.033228 GGAGATGGAGGACGCAGATG 59.967 60.0 0.00 0.0 0.00 2.90 F
719 727 0.035152 ATGGAGGACGCAGATGCAAA 60.035 50.0 5.55 0.0 42.21 3.68 F
939 947 0.101040 TTACGGTCCGCCTTGATACG 59.899 55.0 12.28 0.0 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2220 2259 0.246635 CTTGGGATGTCCGACTCGTT 59.753 55.000 0.00 0.0 38.76 3.85 R
2258 2297 3.241530 AGCGTCTCCTTGGCCACA 61.242 61.111 3.88 0.0 0.00 4.17 R
2800 2853 1.089920 CCGGACAGCATTCAGGAAAG 58.910 55.000 0.00 0.0 32.92 2.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
287 294 1.428718 AACCGGGACAAAAGGCCCTA 61.429 55.000 6.32 0.00 42.40 3.53
300 307 0.696485 GGCCCTACCTATTGGTCCCA 60.696 60.000 0.79 0.00 44.78 4.37
373 380 1.255667 GCCACGTGGAGGACCTTCTA 61.256 60.000 38.30 0.00 37.39 2.10
443 451 1.405121 CCCTTTAGTCCCGGTTCGAAG 60.405 57.143 0.00 3.49 0.00 3.79
496 504 5.125097 GGTAAAAGCCCCTTTTTCTACTAGC 59.875 44.000 8.09 0.00 40.23 3.42
500 508 2.919228 CCCCTTTTTCTACTAGCGCAT 58.081 47.619 11.47 0.00 0.00 4.73
501 509 3.279434 CCCCTTTTTCTACTAGCGCATT 58.721 45.455 11.47 0.00 0.00 3.56
502 510 3.694566 CCCCTTTTTCTACTAGCGCATTT 59.305 43.478 11.47 0.00 0.00 2.32
503 511 4.879545 CCCCTTTTTCTACTAGCGCATTTA 59.120 41.667 11.47 0.00 0.00 1.40
504 512 5.355910 CCCCTTTTTCTACTAGCGCATTTAA 59.644 40.000 11.47 0.00 0.00 1.52
505 513 6.127842 CCCCTTTTTCTACTAGCGCATTTAAA 60.128 38.462 11.47 0.00 0.00 1.52
506 514 7.309920 CCCTTTTTCTACTAGCGCATTTAAAA 58.690 34.615 11.47 5.76 0.00 1.52
507 515 7.810759 CCCTTTTTCTACTAGCGCATTTAAAAA 59.189 33.333 11.47 12.91 0.00 1.94
508 516 9.353999 CCTTTTTCTACTAGCGCATTTAAAAAT 57.646 29.630 11.47 0.00 0.00 1.82
512 520 9.498307 TTTCTACTAGCGCATTTAAAAATAAGC 57.502 29.630 11.47 6.32 33.19 3.09
513 521 8.433421 TCTACTAGCGCATTTAAAAATAAGCT 57.567 30.769 11.47 16.02 40.70 3.74
514 522 8.548721 TCTACTAGCGCATTTAAAAATAAGCTC 58.451 33.333 11.47 1.60 39.41 4.09
515 523 7.083875 ACTAGCGCATTTAAAAATAAGCTCA 57.916 32.000 11.47 6.66 39.41 4.26
516 524 7.535139 ACTAGCGCATTTAAAAATAAGCTCAA 58.465 30.769 11.47 4.48 39.41 3.02
517 525 8.190784 ACTAGCGCATTTAAAAATAAGCTCAAT 58.809 29.630 11.47 5.34 39.41 2.57
518 526 7.225523 AGCGCATTTAAAAATAAGCTCAATG 57.774 32.000 11.47 0.00 36.33 2.82
519 527 7.035004 AGCGCATTTAAAAATAAGCTCAATGA 58.965 30.769 11.47 0.00 36.33 2.57
520 528 7.009540 AGCGCATTTAAAAATAAGCTCAATGAC 59.990 33.333 11.47 0.00 36.33 3.06
521 529 7.201427 GCGCATTTAAAAATAAGCTCAATGACA 60.201 33.333 0.30 0.00 31.53 3.58
522 530 8.810427 CGCATTTAAAAATAAGCTCAATGACAT 58.190 29.630 0.00 0.00 0.00 3.06
532 540 9.722056 AATAAGCTCAATGACATTTAATCGAAC 57.278 29.630 0.00 0.00 0.00 3.95
533 541 6.741992 AGCTCAATGACATTTAATCGAACA 57.258 33.333 0.00 0.00 0.00 3.18
534 542 6.546395 AGCTCAATGACATTTAATCGAACAC 58.454 36.000 0.00 0.00 0.00 3.32
535 543 5.739161 GCTCAATGACATTTAATCGAACACC 59.261 40.000 0.00 0.00 0.00 4.16
536 544 6.403636 GCTCAATGACATTTAATCGAACACCT 60.404 38.462 0.00 0.00 0.00 4.00
537 545 7.201609 GCTCAATGACATTTAATCGAACACCTA 60.202 37.037 0.00 0.00 0.00 3.08
538 546 7.970384 TCAATGACATTTAATCGAACACCTAC 58.030 34.615 0.00 0.00 0.00 3.18
539 547 6.920569 ATGACATTTAATCGAACACCTACC 57.079 37.500 0.00 0.00 0.00 3.18
540 548 5.795972 TGACATTTAATCGAACACCTACCA 58.204 37.500 0.00 0.00 0.00 3.25
541 549 5.872617 TGACATTTAATCGAACACCTACCAG 59.127 40.000 0.00 0.00 0.00 4.00
542 550 6.045072 ACATTTAATCGAACACCTACCAGA 57.955 37.500 0.00 0.00 0.00 3.86
543 551 5.873164 ACATTTAATCGAACACCTACCAGAC 59.127 40.000 0.00 0.00 0.00 3.51
544 552 2.649331 AATCGAACACCTACCAGACG 57.351 50.000 0.00 0.00 0.00 4.18
545 553 1.542492 ATCGAACACCTACCAGACGT 58.458 50.000 0.00 0.00 0.00 4.34
546 554 0.594602 TCGAACACCTACCAGACGTG 59.405 55.000 0.00 0.00 0.00 4.49
559 567 2.342279 ACGTGGTGTCCGTCATGG 59.658 61.111 0.00 0.00 31.97 3.66
568 576 2.115510 TCCGTCATGGAGGTCATCG 58.884 57.895 7.15 0.00 43.74 3.84
569 577 0.395173 TCCGTCATGGAGGTCATCGA 60.395 55.000 7.15 0.00 43.74 3.59
570 578 0.249073 CCGTCATGGAGGTCATCGAC 60.249 60.000 0.00 0.00 42.00 4.20
571 579 0.455815 CGTCATGGAGGTCATCGACA 59.544 55.000 0.00 0.00 35.54 4.35
572 580 1.534805 CGTCATGGAGGTCATCGACAG 60.535 57.143 0.00 0.00 35.54 3.51
573 581 1.114627 TCATGGAGGTCATCGACAGG 58.885 55.000 0.00 0.00 33.68 4.00
574 582 0.105593 CATGGAGGTCATCGACAGGG 59.894 60.000 0.00 0.00 33.68 4.45
575 583 1.050988 ATGGAGGTCATCGACAGGGG 61.051 60.000 0.00 0.00 33.68 4.79
576 584 1.686110 GGAGGTCATCGACAGGGGT 60.686 63.158 0.00 0.00 33.68 4.95
577 585 1.517832 GAGGTCATCGACAGGGGTG 59.482 63.158 0.00 0.00 33.68 4.61
578 586 1.961180 GAGGTCATCGACAGGGGTGG 61.961 65.000 0.00 0.00 33.68 4.61
579 587 1.987855 GGTCATCGACAGGGGTGGA 60.988 63.158 0.00 0.00 36.15 4.02
580 588 1.517832 GTCATCGACAGGGGTGGAG 59.482 63.158 0.00 0.00 35.12 3.86
581 589 1.078528 TCATCGACAGGGGTGGAGT 59.921 57.895 0.00 0.00 35.12 3.85
582 590 1.219124 CATCGACAGGGGTGGAGTG 59.781 63.158 0.00 0.00 35.12 3.51
583 591 1.229209 ATCGACAGGGGTGGAGTGT 60.229 57.895 0.00 0.00 35.12 3.55
584 592 0.040646 ATCGACAGGGGTGGAGTGTA 59.959 55.000 0.00 0.00 35.12 2.90
585 593 0.896940 TCGACAGGGGTGGAGTGTAC 60.897 60.000 0.00 0.00 0.00 2.90
586 594 1.885163 CGACAGGGGTGGAGTGTACC 61.885 65.000 0.00 0.00 37.48 3.34
587 595 0.544595 GACAGGGGTGGAGTGTACCT 60.545 60.000 0.00 0.00 38.30 3.08
588 596 1.983224 CAGGGGTGGAGTGTACCTG 59.017 63.158 0.00 0.00 42.28 4.00
589 597 1.229529 AGGGGTGGAGTGTACCTGG 60.230 63.158 0.00 0.00 38.30 4.45
590 598 2.298661 GGGGTGGAGTGTACCTGGG 61.299 68.421 0.00 0.00 38.30 4.45
591 599 1.538135 GGGTGGAGTGTACCTGGGT 60.538 63.158 0.00 0.00 38.30 4.51
592 600 0.252375 GGGTGGAGTGTACCTGGGTA 60.252 60.000 0.00 0.00 38.30 3.69
603 611 1.971481 ACCTGGGTACAAACGGTTTC 58.029 50.000 2.51 0.00 0.00 2.78
604 612 1.212441 ACCTGGGTACAAACGGTTTCA 59.788 47.619 2.51 0.00 0.00 2.69
605 613 1.877443 CCTGGGTACAAACGGTTTCAG 59.123 52.381 2.51 7.58 0.00 3.02
606 614 2.485835 CCTGGGTACAAACGGTTTCAGA 60.486 50.000 16.40 0.00 0.00 3.27
607 615 2.806244 CTGGGTACAAACGGTTTCAGAG 59.194 50.000 11.67 1.36 0.00 3.35
608 616 2.171027 TGGGTACAAACGGTTTCAGAGT 59.829 45.455 2.51 1.54 0.00 3.24
609 617 2.546789 GGGTACAAACGGTTTCAGAGTG 59.453 50.000 2.51 0.00 0.00 3.51
610 618 2.546789 GGTACAAACGGTTTCAGAGTGG 59.453 50.000 2.51 0.00 0.00 4.00
611 619 1.675552 ACAAACGGTTTCAGAGTGGG 58.324 50.000 2.51 0.00 0.00 4.61
612 620 0.310854 CAAACGGTTTCAGAGTGGGC 59.689 55.000 2.51 0.00 0.00 5.36
613 621 0.106918 AAACGGTTTCAGAGTGGGCA 60.107 50.000 0.00 0.00 0.00 5.36
614 622 0.535102 AACGGTTTCAGAGTGGGCAG 60.535 55.000 0.00 0.00 0.00 4.85
615 623 2.328099 CGGTTTCAGAGTGGGCAGC 61.328 63.158 0.00 0.00 0.00 5.25
616 624 1.073897 GGTTTCAGAGTGGGCAGCT 59.926 57.895 0.00 0.00 0.00 4.24
617 625 0.538287 GGTTTCAGAGTGGGCAGCTT 60.538 55.000 0.00 0.00 0.00 3.74
618 626 0.877743 GTTTCAGAGTGGGCAGCTTC 59.122 55.000 0.00 0.00 0.00 3.86
619 627 0.473755 TTTCAGAGTGGGCAGCTTCA 59.526 50.000 0.00 0.00 0.00 3.02
620 628 0.694771 TTCAGAGTGGGCAGCTTCAT 59.305 50.000 0.00 0.00 0.00 2.57
621 629 0.251354 TCAGAGTGGGCAGCTTCATC 59.749 55.000 0.00 0.00 0.00 2.92
622 630 1.088340 CAGAGTGGGCAGCTTCATCG 61.088 60.000 0.00 0.00 0.00 3.84
623 631 1.078848 GAGTGGGCAGCTTCATCGT 60.079 57.895 0.00 0.00 0.00 3.73
624 632 0.175760 GAGTGGGCAGCTTCATCGTA 59.824 55.000 0.00 0.00 0.00 3.43
625 633 0.176680 AGTGGGCAGCTTCATCGTAG 59.823 55.000 0.00 0.00 0.00 3.51
626 634 0.811616 GTGGGCAGCTTCATCGTAGG 60.812 60.000 0.00 0.00 0.00 3.18
627 635 1.889573 GGGCAGCTTCATCGTAGGC 60.890 63.158 0.00 0.00 0.00 3.93
628 636 2.240500 GGCAGCTTCATCGTAGGCG 61.241 63.158 0.00 0.00 39.92 5.52
629 637 2.875786 GCAGCTTCATCGTAGGCGC 61.876 63.158 0.00 0.00 38.14 6.53
630 638 2.278857 AGCTTCATCGTAGGCGCG 60.279 61.111 0.00 0.00 38.14 6.86
631 639 2.582498 GCTTCATCGTAGGCGCGT 60.582 61.111 8.43 8.08 38.14 6.01
632 640 2.577785 GCTTCATCGTAGGCGCGTC 61.578 63.158 5.57 0.21 38.14 5.19
633 641 2.277692 TTCATCGTAGGCGCGTCG 60.278 61.111 5.57 10.61 38.14 5.12
634 642 2.914797 CTTCATCGTAGGCGCGTCGT 62.915 60.000 5.57 4.38 38.14 4.34
635 643 2.531927 TTCATCGTAGGCGCGTCGTT 62.532 55.000 5.57 2.93 38.14 3.85
636 644 2.578713 ATCGTAGGCGCGTCGTTG 60.579 61.111 5.57 0.00 38.14 4.10
639 647 3.838795 GTAGGCGCGTCGTTGCTG 61.839 66.667 5.57 0.00 0.00 4.41
653 661 3.414700 GCTGGTTGCAGACGTCCG 61.415 66.667 13.01 2.36 42.31 4.79
654 662 2.738521 CTGGTTGCAGACGTCCGG 60.739 66.667 13.01 6.17 0.00 5.14
655 663 4.980805 TGGTTGCAGACGTCCGGC 62.981 66.667 19.64 19.64 36.47 6.13
656 664 4.980805 GGTTGCAGACGTCCGGCA 62.981 66.667 23.78 23.78 44.03 5.69
659 667 2.741985 TGCAGACGTCCGGCAATG 60.742 61.111 24.92 12.07 42.82 2.82
660 668 3.499737 GCAGACGTCCGGCAATGG 61.500 66.667 21.04 0.55 35.96 3.16
661 669 3.499737 CAGACGTCCGGCAATGGC 61.500 66.667 13.01 0.00 40.13 4.40
662 670 3.706373 AGACGTCCGGCAATGGCT 61.706 61.111 13.01 0.00 40.87 4.75
663 671 2.185867 GACGTCCGGCAATGGCTA 59.814 61.111 3.51 0.00 40.87 3.93
664 672 1.227556 GACGTCCGGCAATGGCTAT 60.228 57.895 3.51 0.00 40.87 2.97
665 673 1.498865 GACGTCCGGCAATGGCTATG 61.499 60.000 3.51 1.14 40.87 2.23
666 674 1.523711 CGTCCGGCAATGGCTATGT 60.524 57.895 5.02 0.00 40.87 2.29
667 675 1.775039 CGTCCGGCAATGGCTATGTG 61.775 60.000 5.02 0.00 40.87 3.21
668 676 1.152984 TCCGGCAATGGCTATGTGG 60.153 57.895 5.02 0.00 40.87 4.17
669 677 2.723746 CGGCAATGGCTATGTGGC 59.276 61.111 5.02 8.09 40.87 5.01
670 678 2.723746 GGCAATGGCTATGTGGCG 59.276 61.111 0.00 0.00 45.14 5.69
671 679 2.723746 GCAATGGCTATGTGGCGG 59.276 61.111 0.00 0.00 45.14 6.13
672 680 2.723746 CAATGGCTATGTGGCGGC 59.276 61.111 0.00 0.00 45.14 6.53
673 681 2.519302 AATGGCTATGTGGCGGCC 60.519 61.111 13.32 13.32 45.14 6.13
678 686 3.536917 CTATGTGGCGGCCGGAGA 61.537 66.667 29.38 0.00 0.00 3.71
679 687 3.792053 CTATGTGGCGGCCGGAGAC 62.792 68.421 29.38 9.97 0.00 3.36
692 700 3.571741 GGAGACGTATAGCAGTGGC 57.428 57.895 0.00 0.00 41.61 5.01
693 701 0.744874 GGAGACGTATAGCAGTGGCA 59.255 55.000 0.00 0.00 44.61 4.92
694 702 1.269309 GGAGACGTATAGCAGTGGCAG 60.269 57.143 0.00 0.00 44.61 4.85
695 703 0.103208 AGACGTATAGCAGTGGCAGC 59.897 55.000 0.00 0.00 44.61 5.25
696 704 1.209275 GACGTATAGCAGTGGCAGCG 61.209 60.000 0.00 0.00 44.61 5.18
697 705 1.951130 CGTATAGCAGTGGCAGCGG 60.951 63.158 0.00 0.00 44.61 5.52
698 706 1.441729 GTATAGCAGTGGCAGCGGA 59.558 57.895 0.00 0.00 44.61 5.54
699 707 0.598680 GTATAGCAGTGGCAGCGGAG 60.599 60.000 0.00 0.00 44.61 4.63
700 708 0.755327 TATAGCAGTGGCAGCGGAGA 60.755 55.000 0.00 0.00 44.61 3.71
701 709 1.406065 ATAGCAGTGGCAGCGGAGAT 61.406 55.000 0.00 0.00 44.61 2.75
709 717 2.415010 CAGCGGAGATGGAGGACG 59.585 66.667 0.00 0.00 42.04 4.79
712 720 2.415010 CGGAGATGGAGGACGCAG 59.585 66.667 0.00 0.00 0.00 5.18
713 721 2.121538 CGGAGATGGAGGACGCAGA 61.122 63.158 0.00 0.00 0.00 4.26
714 722 1.459455 CGGAGATGGAGGACGCAGAT 61.459 60.000 0.00 0.00 0.00 2.90
715 723 0.033228 GGAGATGGAGGACGCAGATG 59.967 60.000 0.00 0.00 0.00 2.90
716 724 0.599728 GAGATGGAGGACGCAGATGC 60.600 60.000 0.00 0.00 37.78 3.91
717 725 1.144716 GATGGAGGACGCAGATGCA 59.855 57.895 5.55 0.00 42.21 3.96
718 726 0.462581 GATGGAGGACGCAGATGCAA 60.463 55.000 5.55 0.00 42.21 4.08
719 727 0.035152 ATGGAGGACGCAGATGCAAA 60.035 50.000 5.55 0.00 42.21 3.68
720 728 0.674581 TGGAGGACGCAGATGCAAAG 60.675 55.000 5.55 0.00 42.21 2.77
721 729 1.427020 GAGGACGCAGATGCAAAGC 59.573 57.895 5.55 0.00 42.21 3.51
722 730 1.300971 GAGGACGCAGATGCAAAGCA 61.301 55.000 5.55 0.00 44.86 3.91
723 731 0.890542 AGGACGCAGATGCAAAGCAA 60.891 50.000 5.55 0.00 43.62 3.91
724 732 0.455633 GGACGCAGATGCAAAGCAAG 60.456 55.000 5.55 0.00 43.62 4.01
725 733 0.455633 GACGCAGATGCAAAGCAAGG 60.456 55.000 5.55 0.00 43.62 3.61
726 734 0.890542 ACGCAGATGCAAAGCAAGGA 60.891 50.000 5.55 0.00 43.62 3.36
727 735 0.241749 CGCAGATGCAAAGCAAGGAA 59.758 50.000 5.55 0.00 43.62 3.36
728 736 1.336148 CGCAGATGCAAAGCAAGGAAA 60.336 47.619 5.55 0.00 43.62 3.13
729 737 2.758009 GCAGATGCAAAGCAAGGAAAA 58.242 42.857 0.00 0.00 43.62 2.29
730 738 2.735134 GCAGATGCAAAGCAAGGAAAAG 59.265 45.455 0.00 0.00 43.62 2.27
731 739 3.553508 GCAGATGCAAAGCAAGGAAAAGA 60.554 43.478 0.00 0.00 43.62 2.52
732 740 4.624015 CAGATGCAAAGCAAGGAAAAGAA 58.376 39.130 0.00 0.00 43.62 2.52
733 741 4.684703 CAGATGCAAAGCAAGGAAAAGAAG 59.315 41.667 0.00 0.00 43.62 2.85
734 742 3.457610 TGCAAAGCAAGGAAAAGAAGG 57.542 42.857 0.00 0.00 34.76 3.46
735 743 2.102925 TGCAAAGCAAGGAAAAGAAGGG 59.897 45.455 0.00 0.00 34.76 3.95
736 744 2.759191 CAAAGCAAGGAAAAGAAGGGC 58.241 47.619 0.00 0.00 0.00 5.19
737 745 2.086610 AAGCAAGGAAAAGAAGGGCA 57.913 45.000 0.00 0.00 0.00 5.36
738 746 1.625511 AGCAAGGAAAAGAAGGGCAG 58.374 50.000 0.00 0.00 0.00 4.85
739 747 1.145738 AGCAAGGAAAAGAAGGGCAGA 59.854 47.619 0.00 0.00 0.00 4.26
740 748 1.963515 GCAAGGAAAAGAAGGGCAGAA 59.036 47.619 0.00 0.00 0.00 3.02
741 749 2.564504 GCAAGGAAAAGAAGGGCAGAAT 59.435 45.455 0.00 0.00 0.00 2.40
742 750 3.615834 GCAAGGAAAAGAAGGGCAGAATG 60.616 47.826 0.00 0.00 40.87 2.67
743 751 2.812658 AGGAAAAGAAGGGCAGAATGG 58.187 47.619 0.00 0.00 35.86 3.16
744 752 2.379907 AGGAAAAGAAGGGCAGAATGGA 59.620 45.455 0.00 0.00 35.86 3.41
745 753 3.165071 GGAAAAGAAGGGCAGAATGGAA 58.835 45.455 0.00 0.00 35.86 3.53
746 754 3.194329 GGAAAAGAAGGGCAGAATGGAAG 59.806 47.826 0.00 0.00 35.86 3.46
747 755 3.814504 AAAGAAGGGCAGAATGGAAGA 57.185 42.857 0.00 0.00 35.86 2.87
748 756 3.814504 AAGAAGGGCAGAATGGAAGAA 57.185 42.857 0.00 0.00 35.86 2.52
749 757 3.814504 AGAAGGGCAGAATGGAAGAAA 57.185 42.857 0.00 0.00 35.86 2.52
750 758 4.118168 AGAAGGGCAGAATGGAAGAAAA 57.882 40.909 0.00 0.00 35.86 2.29
751 759 4.681484 AGAAGGGCAGAATGGAAGAAAAT 58.319 39.130 0.00 0.00 35.86 1.82
752 760 5.831103 AGAAGGGCAGAATGGAAGAAAATA 58.169 37.500 0.00 0.00 35.86 1.40
753 761 5.890419 AGAAGGGCAGAATGGAAGAAAATAG 59.110 40.000 0.00 0.00 35.86 1.73
754 762 4.540715 AGGGCAGAATGGAAGAAAATAGG 58.459 43.478 0.00 0.00 35.86 2.57
755 763 4.230502 AGGGCAGAATGGAAGAAAATAGGA 59.769 41.667 0.00 0.00 35.86 2.94
756 764 5.103344 AGGGCAGAATGGAAGAAAATAGGAT 60.103 40.000 0.00 0.00 35.86 3.24
757 765 5.242615 GGGCAGAATGGAAGAAAATAGGATC 59.757 44.000 0.00 0.00 35.86 3.36
758 766 5.829924 GGCAGAATGGAAGAAAATAGGATCA 59.170 40.000 0.00 0.00 35.86 2.92
759 767 6.322201 GGCAGAATGGAAGAAAATAGGATCAA 59.678 38.462 0.00 0.00 35.86 2.57
760 768 7.424001 GCAGAATGGAAGAAAATAGGATCAAG 58.576 38.462 0.00 0.00 35.86 3.02
761 769 7.284034 GCAGAATGGAAGAAAATAGGATCAAGA 59.716 37.037 0.00 0.00 35.86 3.02
762 770 8.838365 CAGAATGGAAGAAAATAGGATCAAGAG 58.162 37.037 0.00 0.00 0.00 2.85
763 771 7.997803 AGAATGGAAGAAAATAGGATCAAGAGG 59.002 37.037 0.00 0.00 0.00 3.69
764 772 6.006275 TGGAAGAAAATAGGATCAAGAGGG 57.994 41.667 0.00 0.00 0.00 4.30
765 773 5.103940 TGGAAGAAAATAGGATCAAGAGGGG 60.104 44.000 0.00 0.00 0.00 4.79
766 774 4.445557 AGAAAATAGGATCAAGAGGGGC 57.554 45.455 0.00 0.00 0.00 5.80
767 775 2.938956 AAATAGGATCAAGAGGGGCG 57.061 50.000 0.00 0.00 0.00 6.13
768 776 2.103153 AATAGGATCAAGAGGGGCGA 57.897 50.000 0.00 0.00 0.00 5.54
769 777 2.334006 ATAGGATCAAGAGGGGCGAT 57.666 50.000 0.00 0.00 0.00 4.58
770 778 2.103153 TAGGATCAAGAGGGGCGATT 57.897 50.000 0.00 0.00 0.00 3.34
771 779 0.471617 AGGATCAAGAGGGGCGATTG 59.528 55.000 0.00 0.00 0.00 2.67
772 780 0.536006 GGATCAAGAGGGGCGATTGG 60.536 60.000 0.00 0.00 0.00 3.16
773 781 0.536006 GATCAAGAGGGGCGATTGGG 60.536 60.000 0.00 0.00 0.00 4.12
774 782 1.281925 ATCAAGAGGGGCGATTGGGT 61.282 55.000 0.00 0.00 0.00 4.51
775 783 1.750399 CAAGAGGGGCGATTGGGTG 60.750 63.158 0.00 0.00 0.00 4.61
776 784 2.983879 AAGAGGGGCGATTGGGTGG 61.984 63.158 0.00 0.00 0.00 4.61
777 785 3.407967 GAGGGGCGATTGGGTGGA 61.408 66.667 0.00 0.00 0.00 4.02
778 786 3.699134 GAGGGGCGATTGGGTGGAC 62.699 68.421 0.00 0.00 0.00 4.02
779 787 4.815108 GGGGCGATTGGGTGGACC 62.815 72.222 0.00 0.00 40.81 4.46
787 795 4.525028 TGGGTGGACCAGGGGTGT 62.525 66.667 0.00 0.00 46.80 4.16
788 796 3.647771 GGGTGGACCAGGGGTGTC 61.648 72.222 0.00 0.00 35.25 3.67
789 797 4.016706 GGTGGACCAGGGGTGTCG 62.017 72.222 0.00 0.00 35.25 4.35
790 798 4.016706 GTGGACCAGGGGTGTCGG 62.017 72.222 0.00 0.00 35.25 4.79
791 799 4.242586 TGGACCAGGGGTGTCGGA 62.243 66.667 0.00 0.00 35.25 4.55
792 800 2.926242 GGACCAGGGGTGTCGGAA 60.926 66.667 0.00 0.00 35.25 4.30
793 801 2.522367 GGACCAGGGGTGTCGGAAA 61.522 63.158 0.00 0.00 35.25 3.13
794 802 1.302271 GACCAGGGGTGTCGGAAAC 60.302 63.158 0.00 0.00 35.25 2.78
795 803 2.033602 CCAGGGGTGTCGGAAACC 59.966 66.667 8.97 8.97 36.94 3.27
796 804 2.526046 CCAGGGGTGTCGGAAACCT 61.526 63.158 16.75 1.60 37.85 3.50
797 805 1.196104 CCAGGGGTGTCGGAAACCTA 61.196 60.000 16.75 0.00 37.85 3.08
798 806 0.909623 CAGGGGTGTCGGAAACCTAT 59.090 55.000 16.75 3.40 37.85 2.57
799 807 2.112998 CAGGGGTGTCGGAAACCTATA 58.887 52.381 16.75 0.00 37.85 1.31
800 808 2.704065 CAGGGGTGTCGGAAACCTATAT 59.296 50.000 16.75 0.00 37.85 0.86
801 809 3.135895 CAGGGGTGTCGGAAACCTATATT 59.864 47.826 16.75 0.00 37.85 1.28
802 810 3.784202 AGGGGTGTCGGAAACCTATATTT 59.216 43.478 16.75 0.00 37.85 1.40
803 811 4.132336 GGGGTGTCGGAAACCTATATTTC 58.868 47.826 16.75 0.00 37.85 2.17
804 812 3.805971 GGGTGTCGGAAACCTATATTTCG 59.194 47.826 16.75 0.00 39.13 3.46
805 813 3.805971 GGTGTCGGAAACCTATATTTCGG 59.194 47.826 10.23 0.00 39.13 4.30
806 814 3.805971 GTGTCGGAAACCTATATTTCGGG 59.194 47.826 6.12 0.00 39.13 5.14
807 815 3.451902 TGTCGGAAACCTATATTTCGGGT 59.548 43.478 6.12 0.00 39.13 5.28
808 816 3.805971 GTCGGAAACCTATATTTCGGGTG 59.194 47.826 6.12 0.00 39.13 4.61
809 817 3.451902 TCGGAAACCTATATTTCGGGTGT 59.548 43.478 6.12 0.00 39.13 4.16
810 818 3.805971 CGGAAACCTATATTTCGGGTGTC 59.194 47.826 0.00 0.00 39.13 3.67
811 819 4.132336 GGAAACCTATATTTCGGGTGTCC 58.868 47.826 5.00 5.00 46.40 4.02
829 837 2.897350 GGGCTCCCGCAAATCTCG 60.897 66.667 0.00 0.00 38.10 4.04
830 838 3.577313 GGCTCCCGCAAATCTCGC 61.577 66.667 0.00 0.00 38.10 5.03
831 839 3.577313 GCTCCCGCAAATCTCGCC 61.577 66.667 0.00 0.00 35.78 5.54
832 840 2.897350 CTCCCGCAAATCTCGCCC 60.897 66.667 0.00 0.00 0.00 6.13
833 841 3.680620 CTCCCGCAAATCTCGCCCA 62.681 63.158 0.00 0.00 0.00 5.36
834 842 3.508840 CCCGCAAATCTCGCCCAC 61.509 66.667 0.00 0.00 0.00 4.61
835 843 2.436646 CCGCAAATCTCGCCCACT 60.437 61.111 0.00 0.00 0.00 4.00
836 844 2.040544 CCGCAAATCTCGCCCACTT 61.041 57.895 0.00 0.00 0.00 3.16
837 845 1.586154 CCGCAAATCTCGCCCACTTT 61.586 55.000 0.00 0.00 0.00 2.66
838 846 0.454957 CGCAAATCTCGCCCACTTTG 60.455 55.000 0.00 0.00 0.00 2.77
839 847 0.598065 GCAAATCTCGCCCACTTTGT 59.402 50.000 0.00 0.00 32.51 2.83
840 848 1.401539 GCAAATCTCGCCCACTTTGTC 60.402 52.381 0.00 0.00 32.51 3.18
841 849 2.154462 CAAATCTCGCCCACTTTGTCT 58.846 47.619 0.00 0.00 0.00 3.41
842 850 2.100605 AATCTCGCCCACTTTGTCTC 57.899 50.000 0.00 0.00 0.00 3.36
843 851 1.270907 ATCTCGCCCACTTTGTCTCT 58.729 50.000 0.00 0.00 0.00 3.10
844 852 1.919240 TCTCGCCCACTTTGTCTCTA 58.081 50.000 0.00 0.00 0.00 2.43
845 853 2.244695 TCTCGCCCACTTTGTCTCTAA 58.755 47.619 0.00 0.00 0.00 2.10
846 854 2.832129 TCTCGCCCACTTTGTCTCTAAT 59.168 45.455 0.00 0.00 0.00 1.73
847 855 3.260884 TCTCGCCCACTTTGTCTCTAATT 59.739 43.478 0.00 0.00 0.00 1.40
848 856 4.003648 CTCGCCCACTTTGTCTCTAATTT 58.996 43.478 0.00 0.00 0.00 1.82
849 857 5.046878 TCTCGCCCACTTTGTCTCTAATTTA 60.047 40.000 0.00 0.00 0.00 1.40
850 858 5.741011 TCGCCCACTTTGTCTCTAATTTAT 58.259 37.500 0.00 0.00 0.00 1.40
851 859 5.584649 TCGCCCACTTTGTCTCTAATTTATG 59.415 40.000 0.00 0.00 0.00 1.90
852 860 5.584649 CGCCCACTTTGTCTCTAATTTATGA 59.415 40.000 0.00 0.00 0.00 2.15
853 861 6.238211 CGCCCACTTTGTCTCTAATTTATGAG 60.238 42.308 0.00 0.00 0.00 2.90
854 862 6.823689 GCCCACTTTGTCTCTAATTTATGAGA 59.176 38.462 0.00 0.00 37.03 3.27
855 863 7.011857 GCCCACTTTGTCTCTAATTTATGAGAG 59.988 40.741 5.96 0.00 39.63 3.20
856 864 8.260818 CCCACTTTGTCTCTAATTTATGAGAGA 58.739 37.037 3.11 3.11 44.67 3.10
870 878 8.674263 ATTTATGAGAGAAATCATGTCCAGAC 57.326 34.615 0.00 0.00 40.16 3.51
871 879 4.478206 TGAGAGAAATCATGTCCAGACC 57.522 45.455 0.00 0.00 0.00 3.85
872 880 3.118992 TGAGAGAAATCATGTCCAGACCG 60.119 47.826 0.00 0.00 0.00 4.79
873 881 2.834549 AGAGAAATCATGTCCAGACCGT 59.165 45.455 0.00 0.00 0.00 4.83
874 882 3.261897 AGAGAAATCATGTCCAGACCGTT 59.738 43.478 0.00 0.00 0.00 4.44
875 883 4.466370 AGAGAAATCATGTCCAGACCGTTA 59.534 41.667 0.00 0.00 0.00 3.18
876 884 4.504858 AGAAATCATGTCCAGACCGTTAC 58.495 43.478 0.00 0.00 0.00 2.50
877 885 2.579207 ATCATGTCCAGACCGTTACG 57.421 50.000 0.00 0.00 0.00 3.18
878 886 0.108992 TCATGTCCAGACCGTTACGC 60.109 55.000 0.00 0.00 0.00 4.42
879 887 1.082117 CATGTCCAGACCGTTACGCC 61.082 60.000 0.00 0.00 0.00 5.68
880 888 2.505557 GTCCAGACCGTTACGCCG 60.506 66.667 0.00 0.00 0.00 6.46
881 889 4.424566 TCCAGACCGTTACGCCGC 62.425 66.667 0.00 0.00 0.00 6.53
894 902 4.501714 GCCGCCGTCACCGATACA 62.502 66.667 0.00 0.00 35.63 2.29
895 903 2.415843 CCGCCGTCACCGATACAT 59.584 61.111 0.00 0.00 35.63 2.29
896 904 1.655885 CCGCCGTCACCGATACATA 59.344 57.895 0.00 0.00 35.63 2.29
897 905 0.242825 CCGCCGTCACCGATACATAT 59.757 55.000 0.00 0.00 35.63 1.78
898 906 1.614385 CGCCGTCACCGATACATATC 58.386 55.000 0.00 0.00 35.63 1.63
899 907 1.068816 CGCCGTCACCGATACATATCA 60.069 52.381 0.10 0.00 35.63 2.15
900 908 2.606065 CGCCGTCACCGATACATATCAA 60.606 50.000 0.10 0.00 35.63 2.57
901 909 3.585862 GCCGTCACCGATACATATCAAT 58.414 45.455 0.10 0.00 35.63 2.57
902 910 3.367932 GCCGTCACCGATACATATCAATG 59.632 47.826 0.10 0.00 36.18 2.82
903 911 4.556233 CCGTCACCGATACATATCAATGT 58.444 43.478 0.10 0.00 42.24 2.71
904 912 4.988540 CCGTCACCGATACATATCAATGTT 59.011 41.667 0.00 0.00 40.84 2.71
905 913 5.107491 CCGTCACCGATACATATCAATGTTG 60.107 44.000 0.00 0.00 40.84 3.33
906 914 5.107491 CGTCACCGATACATATCAATGTTGG 60.107 44.000 0.00 0.53 40.84 3.77
907 915 5.989168 GTCACCGATACATATCAATGTTGGA 59.011 40.000 9.63 0.00 44.07 3.53
908 916 6.650807 GTCACCGATACATATCAATGTTGGAT 59.349 38.462 9.63 0.00 44.07 3.41
909 917 6.650390 TCACCGATACATATCAATGTTGGATG 59.350 38.462 9.63 6.88 44.07 3.51
910 918 5.939883 ACCGATACATATCAATGTTGGATGG 59.060 40.000 9.63 3.70 44.07 3.51
911 919 5.163723 CCGATACATATCAATGTTGGATGGC 60.164 44.000 0.00 0.00 44.07 4.40
912 920 5.645067 CGATACATATCAATGTTGGATGGCT 59.355 40.000 0.00 1.89 44.07 4.75
913 921 6.149973 CGATACATATCAATGTTGGATGGCTT 59.850 38.462 0.00 0.00 44.07 4.35
914 922 5.779529 ACATATCAATGTTGGATGGCTTC 57.220 39.130 10.94 0.00 44.07 3.86
915 923 4.586001 ACATATCAATGTTGGATGGCTTCC 59.414 41.667 12.30 12.30 44.07 3.46
916 924 6.721889 ACATATCAATGTTGGATGGCTTCCG 61.722 44.000 14.06 0.00 44.07 4.30
917 925 9.746624 TACATATCAATGTTGGATGGCTTCCGT 62.747 40.741 14.06 4.63 44.07 4.69
918 926 9.746624 ACATATCAATGTTGGATGGCTTCCGTA 62.747 40.741 14.06 2.87 44.07 4.02
932 940 3.190878 CGTAGTTACGGTCCGCCT 58.809 61.111 12.28 7.56 45.30 5.52
933 941 1.508088 CGTAGTTACGGTCCGCCTT 59.492 57.895 12.28 0.00 45.30 4.35
934 942 0.799534 CGTAGTTACGGTCCGCCTTG 60.800 60.000 12.28 0.00 45.30 3.61
935 943 0.527565 GTAGTTACGGTCCGCCTTGA 59.472 55.000 12.28 0.00 0.00 3.02
936 944 1.135721 GTAGTTACGGTCCGCCTTGAT 59.864 52.381 12.28 0.00 0.00 2.57
937 945 1.477553 AGTTACGGTCCGCCTTGATA 58.522 50.000 12.28 0.00 0.00 2.15
938 946 1.135721 AGTTACGGTCCGCCTTGATAC 59.864 52.381 12.28 0.00 0.00 2.24
939 947 0.101040 TTACGGTCCGCCTTGATACG 59.899 55.000 12.28 0.00 0.00 3.06
940 948 2.340453 TACGGTCCGCCTTGATACGC 62.340 60.000 12.28 0.00 0.00 4.42
941 949 2.588034 GGTCCGCCTTGATACGCC 60.588 66.667 0.00 0.00 0.00 5.68
961 969 3.120304 GCCCTGTTAAGAAAAGTACAGCG 60.120 47.826 0.00 0.00 37.32 5.18
2090 2129 6.549433 AATCATTAATTGGTGCAGGACATT 57.451 33.333 0.00 0.00 0.00 2.71
2597 2637 2.356313 CAGTGCTTCGAGTGGCGT 60.356 61.111 0.00 0.00 41.80 5.68
2744 2791 0.969409 CGTCGGGTTTAGGGGAGAGT 60.969 60.000 0.00 0.00 0.00 3.24
2861 2942 9.630098 CGAGTTAAGGTTTTGTATTACTACAGA 57.370 33.333 0.00 0.00 39.00 3.41
2919 3002 9.039870 CACTAATTGGTTTGAATAAAAACAGCA 57.960 29.630 0.00 0.00 46.01 4.41
2968 3051 3.078837 GTTTTAGGGCATCTCCAACGAA 58.921 45.455 0.00 0.00 36.21 3.85
2974 3057 2.093658 GGGCATCTCCAACGAAGACTTA 60.094 50.000 0.00 0.00 36.21 2.24
2978 3061 4.451096 GCATCTCCAACGAAGACTTACAAA 59.549 41.667 0.00 0.00 0.00 2.83
2983 3066 7.636326 TCTCCAACGAAGACTTACAAATTTTC 58.364 34.615 0.00 0.00 0.00 2.29
2984 3067 6.423862 TCCAACGAAGACTTACAAATTTTCG 58.576 36.000 0.00 3.74 42.04 3.46
2988 3071 5.049886 ACGAAGACTTACAAATTTTCGTCCC 60.050 40.000 4.84 0.00 44.86 4.46
2992 3075 6.478129 AGACTTACAAATTTTCGTCCCCATA 58.522 36.000 0.00 0.00 0.00 2.74
2993 3076 6.373495 AGACTTACAAATTTTCGTCCCCATAC 59.627 38.462 0.00 0.00 0.00 2.39
2994 3077 5.122711 ACTTACAAATTTTCGTCCCCATACG 59.877 40.000 0.00 0.00 44.19 3.06
2995 3078 2.162809 ACAAATTTTCGTCCCCATACGC 59.837 45.455 0.00 0.00 42.56 4.42
2996 3079 1.385528 AATTTTCGTCCCCATACGCC 58.614 50.000 0.00 0.00 42.56 5.68
2997 3080 0.253610 ATTTTCGTCCCCATACGCCA 59.746 50.000 0.00 0.00 42.56 5.69
2998 3081 0.391927 TTTTCGTCCCCATACGCCAG 60.392 55.000 0.00 0.00 42.56 4.85
2999 3082 2.862674 TTTCGTCCCCATACGCCAGC 62.863 60.000 0.00 0.00 42.56 4.85
3000 3083 3.849951 CGTCCCCATACGCCAGCT 61.850 66.667 0.00 0.00 35.87 4.24
3001 3084 2.590092 GTCCCCATACGCCAGCTT 59.410 61.111 0.00 0.00 0.00 3.74
3002 3085 1.077716 GTCCCCATACGCCAGCTTT 60.078 57.895 0.00 0.00 0.00 3.51
3003 3086 1.077787 TCCCCATACGCCAGCTTTG 60.078 57.895 0.00 0.00 0.00 2.77
3060 3150 1.227674 GTAGAGGCCGCCATCCAAG 60.228 63.158 13.15 0.00 0.00 3.61
3062 3152 0.764369 TAGAGGCCGCCATCCAAGAT 60.764 55.000 13.15 0.00 0.00 2.40
3063 3153 1.599240 GAGGCCGCCATCCAAGATC 60.599 63.158 13.15 0.00 0.00 2.75
3064 3154 2.595754 GGCCGCCATCCAAGATCC 60.596 66.667 3.91 0.00 0.00 3.36
3065 3155 2.192979 GCCGCCATCCAAGATCCA 59.807 61.111 0.00 0.00 0.00 3.41
3066 3156 1.453745 GCCGCCATCCAAGATCCAA 60.454 57.895 0.00 0.00 0.00 3.53
3067 3157 1.728490 GCCGCCATCCAAGATCCAAC 61.728 60.000 0.00 0.00 0.00 3.77
3068 3158 0.107017 CCGCCATCCAAGATCCAACT 60.107 55.000 0.00 0.00 0.00 3.16
3073 3163 4.872691 CGCCATCCAAGATCCAACTATATC 59.127 45.833 0.00 0.00 0.00 1.63
3135 3234 3.190849 CAGCGTGCCGGATCACAG 61.191 66.667 5.05 2.73 36.80 3.66
3170 3269 0.600557 TGCCCGATCGCAACAAAAAT 59.399 45.000 10.32 0.00 35.32 1.82
3175 3274 2.916716 CCGATCGCAACAAAAATGAAGG 59.083 45.455 10.32 0.00 0.00 3.46
3176 3275 2.342354 CGATCGCAACAAAAATGAAGGC 59.658 45.455 0.26 0.00 0.00 4.35
3177 3276 2.879002 TCGCAACAAAAATGAAGGCA 57.121 40.000 0.00 0.00 0.00 4.75
3178 3277 3.170791 TCGCAACAAAAATGAAGGCAA 57.829 38.095 0.00 0.00 0.00 4.52
3179 3278 3.525537 TCGCAACAAAAATGAAGGCAAA 58.474 36.364 0.00 0.00 0.00 3.68
3180 3279 4.125703 TCGCAACAAAAATGAAGGCAAAT 58.874 34.783 0.00 0.00 0.00 2.32
3215 3317 6.677913 AGTTTTTACATGTCCGAATCCAAAG 58.322 36.000 0.00 0.00 0.00 2.77
3281 3385 1.949847 AATCCCAGTCGTCTGCTCCG 61.950 60.000 3.97 0.00 40.09 4.63
3332 3441 3.699894 AGCCTCTGCCTCCGTGTG 61.700 66.667 0.00 0.00 38.69 3.82
3407 3519 1.020861 CGCTGCAACATCTGGTAGCA 61.021 55.000 0.00 0.00 41.98 3.49
3464 3576 3.409026 AGAGTCCACATTCAAGGTCAC 57.591 47.619 0.00 0.00 0.00 3.67
3513 3625 3.935828 CGATCTTCACCTTCTTTTCCTCC 59.064 47.826 0.00 0.00 0.00 4.30
3688 3803 1.533033 TCGAACCTCTCCACCAGCA 60.533 57.895 0.00 0.00 0.00 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
287 294 1.354368 CACCAACTGGGACCAATAGGT 59.646 52.381 0.00 0.00 45.14 3.08
373 380 0.533951 GGTCTTACACGAACCGGGAT 59.466 55.000 6.32 0.00 32.98 3.85
443 451 2.675423 GGGCCTTTTGTCCCGGTC 60.675 66.667 0.84 0.00 32.00 4.79
496 504 8.172159 TGTCATTGAGCTTATTTTTAAATGCG 57.828 30.769 0.00 0.00 0.00 4.73
506 514 9.722056 GTTCGATTAAATGTCATTGAGCTTATT 57.278 29.630 0.00 0.00 0.00 1.40
507 515 8.892723 TGTTCGATTAAATGTCATTGAGCTTAT 58.107 29.630 0.00 0.00 0.00 1.73
508 516 8.175069 GTGTTCGATTAAATGTCATTGAGCTTA 58.825 33.333 0.00 0.00 0.00 3.09
509 517 7.023575 GTGTTCGATTAAATGTCATTGAGCTT 58.976 34.615 0.00 0.00 0.00 3.74
510 518 6.403636 GGTGTTCGATTAAATGTCATTGAGCT 60.404 38.462 0.00 0.00 0.00 4.09
511 519 5.739161 GGTGTTCGATTAAATGTCATTGAGC 59.261 40.000 0.00 0.00 0.00 4.26
512 520 7.076842 AGGTGTTCGATTAAATGTCATTGAG 57.923 36.000 0.00 0.00 0.00 3.02
513 521 7.065324 GGTAGGTGTTCGATTAAATGTCATTGA 59.935 37.037 0.00 0.00 0.00 2.57
514 522 7.148323 TGGTAGGTGTTCGATTAAATGTCATTG 60.148 37.037 0.00 0.00 0.00 2.82
515 523 6.882140 TGGTAGGTGTTCGATTAAATGTCATT 59.118 34.615 0.00 0.00 0.00 2.57
516 524 6.411376 TGGTAGGTGTTCGATTAAATGTCAT 58.589 36.000 0.00 0.00 0.00 3.06
517 525 5.795972 TGGTAGGTGTTCGATTAAATGTCA 58.204 37.500 0.00 0.00 0.00 3.58
518 526 6.035758 GTCTGGTAGGTGTTCGATTAAATGTC 59.964 42.308 0.00 0.00 0.00 3.06
519 527 5.873164 GTCTGGTAGGTGTTCGATTAAATGT 59.127 40.000 0.00 0.00 0.00 2.71
520 528 5.005394 CGTCTGGTAGGTGTTCGATTAAATG 59.995 44.000 0.00 0.00 0.00 2.32
521 529 5.107133 CGTCTGGTAGGTGTTCGATTAAAT 58.893 41.667 0.00 0.00 0.00 1.40
522 530 4.022068 ACGTCTGGTAGGTGTTCGATTAAA 60.022 41.667 0.00 0.00 0.00 1.52
523 531 3.507233 ACGTCTGGTAGGTGTTCGATTAA 59.493 43.478 0.00 0.00 0.00 1.40
524 532 3.084039 ACGTCTGGTAGGTGTTCGATTA 58.916 45.455 0.00 0.00 0.00 1.75
525 533 1.891150 ACGTCTGGTAGGTGTTCGATT 59.109 47.619 0.00 0.00 0.00 3.34
526 534 1.201647 CACGTCTGGTAGGTGTTCGAT 59.798 52.381 0.00 0.00 38.81 3.59
527 535 0.594602 CACGTCTGGTAGGTGTTCGA 59.405 55.000 0.00 0.00 38.81 3.71
528 536 0.388134 CCACGTCTGGTAGGTGTTCG 60.388 60.000 0.00 0.00 41.43 3.95
529 537 3.509388 CCACGTCTGGTAGGTGTTC 57.491 57.895 0.00 0.00 41.43 3.18
543 551 1.446099 CTCCATGACGGACACCACG 60.446 63.158 0.00 0.00 39.64 4.94
544 552 1.079127 CCTCCATGACGGACACCAC 60.079 63.158 0.00 0.00 39.64 4.16
545 553 1.535444 ACCTCCATGACGGACACCA 60.535 57.895 7.17 0.00 39.64 4.17
546 554 1.218316 GACCTCCATGACGGACACC 59.782 63.158 7.17 0.00 39.64 4.16
547 555 0.537188 ATGACCTCCATGACGGACAC 59.463 55.000 7.17 0.64 39.64 3.67
548 556 0.824109 GATGACCTCCATGACGGACA 59.176 55.000 7.17 7.38 39.64 4.02
549 557 0.249073 CGATGACCTCCATGACGGAC 60.249 60.000 7.17 2.29 39.64 4.79
550 558 0.395173 TCGATGACCTCCATGACGGA 60.395 55.000 7.17 0.00 43.61 4.69
551 559 0.249073 GTCGATGACCTCCATGACGG 60.249 60.000 0.00 0.00 35.17 4.79
552 560 0.455815 TGTCGATGACCTCCATGACG 59.544 55.000 0.00 0.00 36.74 4.35
553 561 1.202463 CCTGTCGATGACCTCCATGAC 60.202 57.143 0.00 0.00 35.17 3.06
554 562 1.114627 CCTGTCGATGACCTCCATGA 58.885 55.000 0.00 0.00 35.17 3.07
555 563 0.105593 CCCTGTCGATGACCTCCATG 59.894 60.000 0.00 0.00 35.17 3.66
556 564 1.050988 CCCCTGTCGATGACCTCCAT 61.051 60.000 0.00 0.00 38.43 3.41
557 565 1.685765 CCCCTGTCGATGACCTCCA 60.686 63.158 0.00 0.00 0.00 3.86
558 566 1.686110 ACCCCTGTCGATGACCTCC 60.686 63.158 0.00 0.00 0.00 4.30
559 567 1.517832 CACCCCTGTCGATGACCTC 59.482 63.158 0.00 0.00 0.00 3.85
560 568 1.990060 CCACCCCTGTCGATGACCT 60.990 63.158 0.00 0.00 0.00 3.85
561 569 1.961180 CTCCACCCCTGTCGATGACC 61.961 65.000 0.00 0.00 0.00 4.02
562 570 1.258445 ACTCCACCCCTGTCGATGAC 61.258 60.000 0.00 0.00 0.00 3.06
563 571 1.078528 ACTCCACCCCTGTCGATGA 59.921 57.895 0.00 0.00 0.00 2.92
564 572 1.219124 CACTCCACCCCTGTCGATG 59.781 63.158 0.00 0.00 0.00 3.84
565 573 0.040646 TACACTCCACCCCTGTCGAT 59.959 55.000 0.00 0.00 0.00 3.59
566 574 0.896940 GTACACTCCACCCCTGTCGA 60.897 60.000 0.00 0.00 0.00 4.20
567 575 1.590147 GTACACTCCACCCCTGTCG 59.410 63.158 0.00 0.00 0.00 4.35
568 576 0.544595 AGGTACACTCCACCCCTGTC 60.545 60.000 0.00 0.00 36.67 3.51
569 577 0.836400 CAGGTACACTCCACCCCTGT 60.836 60.000 0.00 0.00 38.28 4.00
570 578 1.553690 CCAGGTACACTCCACCCCTG 61.554 65.000 0.00 0.00 41.89 4.45
571 579 1.229529 CCAGGTACACTCCACCCCT 60.230 63.158 0.00 0.00 36.67 4.79
572 580 2.298661 CCCAGGTACACTCCACCCC 61.299 68.421 0.00 0.00 36.67 4.95
573 581 0.252375 TACCCAGGTACACTCCACCC 60.252 60.000 0.00 0.00 36.67 4.61
574 582 3.386716 TACCCAGGTACACTCCACC 57.613 57.895 0.00 0.00 36.22 4.61
583 591 2.437281 TGAAACCGTTTGTACCCAGGTA 59.563 45.455 0.00 0.00 34.35 3.08
584 592 1.212441 TGAAACCGTTTGTACCCAGGT 59.788 47.619 0.00 0.00 36.66 4.00
585 593 1.877443 CTGAAACCGTTTGTACCCAGG 59.123 52.381 0.00 0.00 0.00 4.45
586 594 2.806244 CTCTGAAACCGTTTGTACCCAG 59.194 50.000 0.00 2.57 0.00 4.45
587 595 2.171027 ACTCTGAAACCGTTTGTACCCA 59.829 45.455 0.00 0.00 0.00 4.51
588 596 2.546789 CACTCTGAAACCGTTTGTACCC 59.453 50.000 0.00 0.00 0.00 3.69
589 597 2.546789 CCACTCTGAAACCGTTTGTACC 59.453 50.000 0.00 0.00 0.00 3.34
590 598 2.546789 CCCACTCTGAAACCGTTTGTAC 59.453 50.000 0.00 0.00 0.00 2.90
591 599 2.841215 CCCACTCTGAAACCGTTTGTA 58.159 47.619 0.00 0.00 0.00 2.41
592 600 1.675552 CCCACTCTGAAACCGTTTGT 58.324 50.000 0.00 0.00 0.00 2.83
593 601 0.310854 GCCCACTCTGAAACCGTTTG 59.689 55.000 0.00 0.00 0.00 2.93
594 602 0.106918 TGCCCACTCTGAAACCGTTT 60.107 50.000 0.00 0.00 0.00 3.60
595 603 0.535102 CTGCCCACTCTGAAACCGTT 60.535 55.000 0.00 0.00 0.00 4.44
596 604 1.071471 CTGCCCACTCTGAAACCGT 59.929 57.895 0.00 0.00 0.00 4.83
597 605 2.328099 GCTGCCCACTCTGAAACCG 61.328 63.158 0.00 0.00 0.00 4.44
598 606 0.538287 AAGCTGCCCACTCTGAAACC 60.538 55.000 0.00 0.00 0.00 3.27
599 607 0.877743 GAAGCTGCCCACTCTGAAAC 59.122 55.000 0.00 0.00 0.00 2.78
600 608 0.473755 TGAAGCTGCCCACTCTGAAA 59.526 50.000 0.00 0.00 0.00 2.69
601 609 0.694771 ATGAAGCTGCCCACTCTGAA 59.305 50.000 0.00 0.00 0.00 3.02
602 610 0.251354 GATGAAGCTGCCCACTCTGA 59.749 55.000 0.00 0.00 0.00 3.27
603 611 1.088340 CGATGAAGCTGCCCACTCTG 61.088 60.000 0.00 0.00 0.00 3.35
604 612 1.220206 CGATGAAGCTGCCCACTCT 59.780 57.895 0.00 0.00 0.00 3.24
605 613 0.175760 TACGATGAAGCTGCCCACTC 59.824 55.000 0.00 0.00 0.00 3.51
606 614 0.176680 CTACGATGAAGCTGCCCACT 59.823 55.000 0.00 0.00 0.00 4.00
607 615 0.811616 CCTACGATGAAGCTGCCCAC 60.812 60.000 0.00 0.00 0.00 4.61
608 616 1.522092 CCTACGATGAAGCTGCCCA 59.478 57.895 0.00 0.00 0.00 5.36
609 617 1.889573 GCCTACGATGAAGCTGCCC 60.890 63.158 0.00 0.00 0.00 5.36
610 618 2.240500 CGCCTACGATGAAGCTGCC 61.241 63.158 0.00 0.00 43.93 4.85
611 619 2.875786 GCGCCTACGATGAAGCTGC 61.876 63.158 0.00 0.00 43.93 5.25
612 620 2.580470 CGCGCCTACGATGAAGCTG 61.580 63.158 0.00 0.00 43.93 4.24
613 621 2.278857 CGCGCCTACGATGAAGCT 60.279 61.111 0.00 0.00 43.93 3.74
614 622 2.577785 GACGCGCCTACGATGAAGC 61.578 63.158 5.73 0.00 43.93 3.86
615 623 2.286559 CGACGCGCCTACGATGAAG 61.287 63.158 5.73 0.00 43.93 3.02
616 624 2.277692 CGACGCGCCTACGATGAA 60.278 61.111 5.73 0.00 43.93 2.57
617 625 3.042842 AACGACGCGCCTACGATGA 62.043 57.895 19.06 0.00 43.93 2.92
618 626 2.578713 AACGACGCGCCTACGATG 60.579 61.111 19.06 0.00 43.93 3.84
619 627 2.578713 CAACGACGCGCCTACGAT 60.579 61.111 19.06 7.36 43.93 3.73
622 630 3.838795 CAGCAACGACGCGCCTAC 61.839 66.667 5.73 0.00 36.85 3.18
636 644 3.414700 CGGACGTCTGCAACCAGC 61.415 66.667 16.46 0.00 45.96 4.85
637 645 2.738521 CCGGACGTCTGCAACCAG 60.739 66.667 19.31 0.02 40.54 4.00
638 646 4.980805 GCCGGACGTCTGCAACCA 62.981 66.667 19.31 0.00 0.00 3.67
639 647 4.980805 TGCCGGACGTCTGCAACC 62.981 66.667 24.25 11.58 30.85 3.77
640 648 2.325082 ATTGCCGGACGTCTGCAAC 61.325 57.895 32.76 20.13 46.60 4.17
642 650 2.741985 CATTGCCGGACGTCTGCA 60.742 61.111 23.18 23.18 0.00 4.41
643 651 3.499737 CCATTGCCGGACGTCTGC 61.500 66.667 19.31 19.32 0.00 4.26
644 652 2.572095 TAGCCATTGCCGGACGTCTG 62.572 60.000 17.81 17.81 38.69 3.51
645 653 1.686325 ATAGCCATTGCCGGACGTCT 61.686 55.000 16.46 0.00 38.69 4.18
646 654 1.227556 ATAGCCATTGCCGGACGTC 60.228 57.895 5.05 7.13 38.69 4.34
647 655 1.523711 CATAGCCATTGCCGGACGT 60.524 57.895 5.05 0.00 38.69 4.34
648 656 1.523711 ACATAGCCATTGCCGGACG 60.524 57.895 5.05 0.00 38.69 4.79
649 657 1.447317 CCACATAGCCATTGCCGGAC 61.447 60.000 5.05 0.00 38.69 4.79
650 658 1.152984 CCACATAGCCATTGCCGGA 60.153 57.895 5.05 0.00 38.69 5.14
651 659 2.848858 GCCACATAGCCATTGCCGG 61.849 63.158 0.00 0.00 38.69 6.13
652 660 2.723746 GCCACATAGCCATTGCCG 59.276 61.111 0.00 0.00 38.69 5.69
653 661 2.723746 CGCCACATAGCCATTGCC 59.276 61.111 0.00 0.00 38.69 4.52
654 662 2.723746 CCGCCACATAGCCATTGC 59.276 61.111 0.00 0.00 37.95 3.56
655 663 2.723746 GCCGCCACATAGCCATTG 59.276 61.111 0.00 0.00 0.00 2.82
656 664 2.519302 GGCCGCCACATAGCCATT 60.519 61.111 3.91 0.00 46.34 3.16
661 669 3.536917 TCTCCGGCCGCCACATAG 61.537 66.667 22.85 9.45 0.00 2.23
662 670 3.845259 GTCTCCGGCCGCCACATA 61.845 66.667 22.85 0.00 0.00 2.29
667 675 3.264866 CTATACGTCTCCGGCCGCC 62.265 68.421 22.85 5.91 38.78 6.13
668 676 2.254651 CTATACGTCTCCGGCCGC 59.745 66.667 22.85 4.73 38.78 6.53
669 677 2.254651 GCTATACGTCTCCGGCCG 59.745 66.667 21.04 21.04 38.78 6.13
670 678 1.286260 CTGCTATACGTCTCCGGCC 59.714 63.158 0.00 0.00 38.78 6.13
671 679 0.317938 CACTGCTATACGTCTCCGGC 60.318 60.000 0.00 0.00 38.78 6.13
672 680 0.311165 CCACTGCTATACGTCTCCGG 59.689 60.000 0.00 0.00 38.78 5.14
673 681 0.317938 GCCACTGCTATACGTCTCCG 60.318 60.000 0.00 0.00 35.62 4.63
674 682 0.744874 TGCCACTGCTATACGTCTCC 59.255 55.000 0.00 0.00 38.71 3.71
675 683 1.866063 GCTGCCACTGCTATACGTCTC 60.866 57.143 0.00 0.00 38.71 3.36
676 684 0.103208 GCTGCCACTGCTATACGTCT 59.897 55.000 0.00 0.00 38.71 4.18
677 685 1.209275 CGCTGCCACTGCTATACGTC 61.209 60.000 0.00 0.00 38.71 4.34
678 686 1.226974 CGCTGCCACTGCTATACGT 60.227 57.895 0.00 0.00 38.71 3.57
679 687 1.951130 CCGCTGCCACTGCTATACG 60.951 63.158 0.00 0.00 38.71 3.06
680 688 0.598680 CTCCGCTGCCACTGCTATAC 60.599 60.000 0.00 0.00 38.71 1.47
681 689 0.755327 TCTCCGCTGCCACTGCTATA 60.755 55.000 0.00 0.00 38.71 1.31
682 690 1.406065 ATCTCCGCTGCCACTGCTAT 61.406 55.000 0.00 0.00 38.71 2.97
683 691 2.060383 ATCTCCGCTGCCACTGCTA 61.060 57.895 0.00 0.00 38.71 3.49
684 692 3.397439 ATCTCCGCTGCCACTGCT 61.397 61.111 0.00 0.00 38.71 4.24
685 693 3.200593 CATCTCCGCTGCCACTGC 61.201 66.667 0.00 0.00 38.26 4.40
686 694 2.513204 CCATCTCCGCTGCCACTG 60.513 66.667 0.00 0.00 0.00 3.66
687 695 2.685017 TCCATCTCCGCTGCCACT 60.685 61.111 0.00 0.00 0.00 4.00
688 696 2.202987 CTCCATCTCCGCTGCCAC 60.203 66.667 0.00 0.00 0.00 5.01
689 697 3.473647 CCTCCATCTCCGCTGCCA 61.474 66.667 0.00 0.00 0.00 4.92
690 698 3.157252 TCCTCCATCTCCGCTGCC 61.157 66.667 0.00 0.00 0.00 4.85
691 699 2.107953 GTCCTCCATCTCCGCTGC 59.892 66.667 0.00 0.00 0.00 5.25
692 700 2.415010 CGTCCTCCATCTCCGCTG 59.585 66.667 0.00 0.00 0.00 5.18
693 701 3.532155 GCGTCCTCCATCTCCGCT 61.532 66.667 0.00 0.00 41.06 5.52
694 702 3.781770 CTGCGTCCTCCATCTCCGC 62.782 68.421 0.00 0.00 44.27 5.54
695 703 1.459455 ATCTGCGTCCTCCATCTCCG 61.459 60.000 0.00 0.00 0.00 4.63
696 704 0.033228 CATCTGCGTCCTCCATCTCC 59.967 60.000 0.00 0.00 0.00 3.71
697 705 0.599728 GCATCTGCGTCCTCCATCTC 60.600 60.000 0.00 0.00 0.00 2.75
698 706 1.332889 TGCATCTGCGTCCTCCATCT 61.333 55.000 0.00 0.00 45.83 2.90
699 707 0.462581 TTGCATCTGCGTCCTCCATC 60.463 55.000 0.00 0.00 45.83 3.51
700 708 0.035152 TTTGCATCTGCGTCCTCCAT 60.035 50.000 0.00 0.00 45.83 3.41
701 709 0.674581 CTTTGCATCTGCGTCCTCCA 60.675 55.000 0.00 0.00 45.83 3.86
702 710 1.986575 GCTTTGCATCTGCGTCCTCC 61.987 60.000 0.00 0.00 45.83 4.30
703 711 1.300971 TGCTTTGCATCTGCGTCCTC 61.301 55.000 0.00 0.00 45.83 3.71
704 712 0.890542 TTGCTTTGCATCTGCGTCCT 60.891 50.000 0.00 0.00 45.83 3.85
705 713 0.455633 CTTGCTTTGCATCTGCGTCC 60.456 55.000 0.00 0.00 45.83 4.79
706 714 0.455633 CCTTGCTTTGCATCTGCGTC 60.456 55.000 0.00 0.00 45.83 5.19
707 715 0.890542 TCCTTGCTTTGCATCTGCGT 60.891 50.000 0.00 0.00 45.83 5.24
708 716 0.241749 TTCCTTGCTTTGCATCTGCG 59.758 50.000 0.00 0.00 45.83 5.18
709 717 2.443887 TTTCCTTGCTTTGCATCTGC 57.556 45.000 0.00 0.00 38.76 4.26
710 718 4.247267 TCTTTTCCTTGCTTTGCATCTG 57.753 40.909 0.00 0.00 38.76 2.90
711 719 4.262335 CCTTCTTTTCCTTGCTTTGCATCT 60.262 41.667 0.00 0.00 38.76 2.90
712 720 3.992427 CCTTCTTTTCCTTGCTTTGCATC 59.008 43.478 0.00 0.00 38.76 3.91
713 721 3.244318 CCCTTCTTTTCCTTGCTTTGCAT 60.244 43.478 0.00 0.00 38.76 3.96
714 722 2.102925 CCCTTCTTTTCCTTGCTTTGCA 59.897 45.455 0.00 0.00 36.47 4.08
715 723 2.759191 CCCTTCTTTTCCTTGCTTTGC 58.241 47.619 0.00 0.00 0.00 3.68
716 724 2.102925 TGCCCTTCTTTTCCTTGCTTTG 59.897 45.455 0.00 0.00 0.00 2.77
717 725 2.366590 CTGCCCTTCTTTTCCTTGCTTT 59.633 45.455 0.00 0.00 0.00 3.51
718 726 1.966354 CTGCCCTTCTTTTCCTTGCTT 59.034 47.619 0.00 0.00 0.00 3.91
719 727 1.145738 TCTGCCCTTCTTTTCCTTGCT 59.854 47.619 0.00 0.00 0.00 3.91
720 728 1.620822 TCTGCCCTTCTTTTCCTTGC 58.379 50.000 0.00 0.00 0.00 4.01
721 729 3.056322 CCATTCTGCCCTTCTTTTCCTTG 60.056 47.826 0.00 0.00 0.00 3.61
722 730 3.168292 CCATTCTGCCCTTCTTTTCCTT 58.832 45.455 0.00 0.00 0.00 3.36
723 731 2.379907 TCCATTCTGCCCTTCTTTTCCT 59.620 45.455 0.00 0.00 0.00 3.36
724 732 2.807676 TCCATTCTGCCCTTCTTTTCC 58.192 47.619 0.00 0.00 0.00 3.13
725 733 4.082125 TCTTCCATTCTGCCCTTCTTTTC 58.918 43.478 0.00 0.00 0.00 2.29
726 734 4.118168 TCTTCCATTCTGCCCTTCTTTT 57.882 40.909 0.00 0.00 0.00 2.27
727 735 3.814504 TCTTCCATTCTGCCCTTCTTT 57.185 42.857 0.00 0.00 0.00 2.52
728 736 3.814504 TTCTTCCATTCTGCCCTTCTT 57.185 42.857 0.00 0.00 0.00 2.52
729 737 3.814504 TTTCTTCCATTCTGCCCTTCT 57.185 42.857 0.00 0.00 0.00 2.85
730 738 5.068329 CCTATTTTCTTCCATTCTGCCCTTC 59.932 44.000 0.00 0.00 0.00 3.46
731 739 4.958581 CCTATTTTCTTCCATTCTGCCCTT 59.041 41.667 0.00 0.00 0.00 3.95
732 740 4.230502 TCCTATTTTCTTCCATTCTGCCCT 59.769 41.667 0.00 0.00 0.00 5.19
733 741 4.536765 TCCTATTTTCTTCCATTCTGCCC 58.463 43.478 0.00 0.00 0.00 5.36
734 742 5.829924 TGATCCTATTTTCTTCCATTCTGCC 59.170 40.000 0.00 0.00 0.00 4.85
735 743 6.949352 TGATCCTATTTTCTTCCATTCTGC 57.051 37.500 0.00 0.00 0.00 4.26
736 744 8.743085 TCTTGATCCTATTTTCTTCCATTCTG 57.257 34.615 0.00 0.00 0.00 3.02
737 745 7.997803 CCTCTTGATCCTATTTTCTTCCATTCT 59.002 37.037 0.00 0.00 0.00 2.40
738 746 7.230309 CCCTCTTGATCCTATTTTCTTCCATTC 59.770 40.741 0.00 0.00 0.00 2.67
739 747 7.065504 CCCTCTTGATCCTATTTTCTTCCATT 58.934 38.462 0.00 0.00 0.00 3.16
740 748 6.411320 CCCCTCTTGATCCTATTTTCTTCCAT 60.411 42.308 0.00 0.00 0.00 3.41
741 749 5.103940 CCCCTCTTGATCCTATTTTCTTCCA 60.104 44.000 0.00 0.00 0.00 3.53
742 750 5.380900 CCCCTCTTGATCCTATTTTCTTCC 58.619 45.833 0.00 0.00 0.00 3.46
743 751 4.824537 GCCCCTCTTGATCCTATTTTCTTC 59.175 45.833 0.00 0.00 0.00 2.87
744 752 4.687219 CGCCCCTCTTGATCCTATTTTCTT 60.687 45.833 0.00 0.00 0.00 2.52
745 753 3.181450 CGCCCCTCTTGATCCTATTTTCT 60.181 47.826 0.00 0.00 0.00 2.52
746 754 3.142174 CGCCCCTCTTGATCCTATTTTC 58.858 50.000 0.00 0.00 0.00 2.29
747 755 2.777692 TCGCCCCTCTTGATCCTATTTT 59.222 45.455 0.00 0.00 0.00 1.82
748 756 2.408565 TCGCCCCTCTTGATCCTATTT 58.591 47.619 0.00 0.00 0.00 1.40
749 757 2.103153 TCGCCCCTCTTGATCCTATT 57.897 50.000 0.00 0.00 0.00 1.73
750 758 2.304180 CAATCGCCCCTCTTGATCCTAT 59.696 50.000 0.00 0.00 0.00 2.57
751 759 1.694150 CAATCGCCCCTCTTGATCCTA 59.306 52.381 0.00 0.00 0.00 2.94
752 760 0.471617 CAATCGCCCCTCTTGATCCT 59.528 55.000 0.00 0.00 0.00 3.24
753 761 0.536006 CCAATCGCCCCTCTTGATCC 60.536 60.000 0.00 0.00 0.00 3.36
754 762 0.536006 CCCAATCGCCCCTCTTGATC 60.536 60.000 0.00 0.00 0.00 2.92
755 763 1.281925 ACCCAATCGCCCCTCTTGAT 61.282 55.000 0.00 0.00 0.00 2.57
756 764 1.923395 ACCCAATCGCCCCTCTTGA 60.923 57.895 0.00 0.00 0.00 3.02
757 765 1.750399 CACCCAATCGCCCCTCTTG 60.750 63.158 0.00 0.00 0.00 3.02
758 766 2.677228 CACCCAATCGCCCCTCTT 59.323 61.111 0.00 0.00 0.00 2.85
759 767 3.411517 CCACCCAATCGCCCCTCT 61.412 66.667 0.00 0.00 0.00 3.69
760 768 3.407967 TCCACCCAATCGCCCCTC 61.408 66.667 0.00 0.00 0.00 4.30
761 769 3.728373 GTCCACCCAATCGCCCCT 61.728 66.667 0.00 0.00 0.00 4.79
762 770 4.815108 GGTCCACCCAATCGCCCC 62.815 72.222 0.00 0.00 0.00 5.80
763 771 3.995506 CTGGTCCACCCAATCGCCC 62.996 68.421 0.00 0.00 44.65 6.13
764 772 2.438434 CTGGTCCACCCAATCGCC 60.438 66.667 0.00 0.00 44.65 5.54
765 773 2.438434 CCTGGTCCACCCAATCGC 60.438 66.667 0.00 0.00 44.65 4.58
766 774 2.272146 CCCTGGTCCACCCAATCG 59.728 66.667 0.00 0.00 44.65 3.34
767 775 2.238701 ACCCCTGGTCCACCCAATC 61.239 63.158 0.00 0.00 44.65 2.67
768 776 2.121042 ACCCCTGGTCCACCCAAT 60.121 61.111 0.00 0.00 44.65 3.16
769 777 3.182263 CACCCCTGGTCCACCCAA 61.182 66.667 0.00 0.00 44.65 4.12
770 778 4.525028 ACACCCCTGGTCCACCCA 62.525 66.667 0.00 0.00 42.51 4.51
771 779 3.647771 GACACCCCTGGTCCACCC 61.648 72.222 0.00 0.00 31.02 4.61
772 780 4.016706 CGACACCCCTGGTCCACC 62.017 72.222 0.00 0.00 31.02 4.61
773 781 4.016706 CCGACACCCCTGGTCCAC 62.017 72.222 0.00 0.00 31.02 4.02
774 782 3.777818 TTCCGACACCCCTGGTCCA 62.778 63.158 0.00 0.00 31.02 4.02
775 783 2.522367 TTTCCGACACCCCTGGTCC 61.522 63.158 0.00 0.00 31.02 4.46
776 784 1.302271 GTTTCCGACACCCCTGGTC 60.302 63.158 0.00 0.00 31.02 4.02
777 785 2.826003 GGTTTCCGACACCCCTGGT 61.826 63.158 0.00 0.00 35.62 4.00
778 786 1.196104 TAGGTTTCCGACACCCCTGG 61.196 60.000 0.00 0.00 34.44 4.45
779 787 0.909623 ATAGGTTTCCGACACCCCTG 59.090 55.000 0.00 0.00 34.44 4.45
780 788 2.555732 TATAGGTTTCCGACACCCCT 57.444 50.000 0.00 0.00 34.44 4.79
781 789 3.851458 AATATAGGTTTCCGACACCCC 57.149 47.619 0.00 0.00 34.44 4.95
782 790 3.805971 CGAAATATAGGTTTCCGACACCC 59.194 47.826 0.00 0.00 35.23 4.61
783 791 3.805971 CCGAAATATAGGTTTCCGACACC 59.194 47.826 0.00 0.00 35.23 4.16
784 792 3.805971 CCCGAAATATAGGTTTCCGACAC 59.194 47.826 0.00 0.00 35.23 3.67
785 793 3.451902 ACCCGAAATATAGGTTTCCGACA 59.548 43.478 0.00 0.00 35.23 4.35
786 794 3.805971 CACCCGAAATATAGGTTTCCGAC 59.194 47.826 0.00 0.00 35.23 4.79
787 795 3.451902 ACACCCGAAATATAGGTTTCCGA 59.548 43.478 0.00 0.00 35.23 4.55
788 796 3.800531 ACACCCGAAATATAGGTTTCCG 58.199 45.455 0.00 0.00 35.23 4.30
789 797 4.132336 GGACACCCGAAATATAGGTTTCC 58.868 47.826 0.00 0.00 41.86 3.13
815 823 2.897350 GGGCGAGATTTGCGGGAG 60.897 66.667 0.00 0.00 0.00 4.30
816 824 3.711814 TGGGCGAGATTTGCGGGA 61.712 61.111 0.00 0.00 0.00 5.14
817 825 3.508840 GTGGGCGAGATTTGCGGG 61.509 66.667 0.00 0.00 0.00 6.13
818 826 1.586154 AAAGTGGGCGAGATTTGCGG 61.586 55.000 0.00 0.00 0.00 5.69
819 827 0.454957 CAAAGTGGGCGAGATTTGCG 60.455 55.000 0.00 0.00 0.00 4.85
820 828 0.598065 ACAAAGTGGGCGAGATTTGC 59.402 50.000 6.93 0.00 36.36 3.68
821 829 2.154462 AGACAAAGTGGGCGAGATTTG 58.846 47.619 5.83 5.83 38.35 2.32
822 830 2.039084 AGAGACAAAGTGGGCGAGATTT 59.961 45.455 0.00 0.00 0.00 2.17
823 831 1.625818 AGAGACAAAGTGGGCGAGATT 59.374 47.619 0.00 0.00 0.00 2.40
824 832 1.270907 AGAGACAAAGTGGGCGAGAT 58.729 50.000 0.00 0.00 0.00 2.75
825 833 1.919240 TAGAGACAAAGTGGGCGAGA 58.081 50.000 0.00 0.00 0.00 4.04
826 834 2.743636 TTAGAGACAAAGTGGGCGAG 57.256 50.000 0.00 0.00 0.00 5.03
827 835 3.695830 AATTAGAGACAAAGTGGGCGA 57.304 42.857 0.00 0.00 0.00 5.54
828 836 5.584649 TCATAAATTAGAGACAAAGTGGGCG 59.415 40.000 0.00 0.00 0.00 6.13
829 837 6.823689 TCTCATAAATTAGAGACAAAGTGGGC 59.176 38.462 2.14 0.00 36.05 5.36
830 838 8.260818 TCTCTCATAAATTAGAGACAAAGTGGG 58.739 37.037 2.16 0.00 42.52 4.61
831 839 9.658799 TTCTCTCATAAATTAGAGACAAAGTGG 57.341 33.333 5.35 0.00 46.01 4.00
844 852 9.118300 GTCTGGACATGATTTCTCTCATAAATT 57.882 33.333 0.00 0.00 34.11 1.82
845 853 7.718753 GGTCTGGACATGATTTCTCTCATAAAT 59.281 37.037 0.00 0.00 34.11 1.40
846 854 7.050377 GGTCTGGACATGATTTCTCTCATAAA 58.950 38.462 0.00 0.00 34.11 1.40
847 855 6.586344 GGTCTGGACATGATTTCTCTCATAA 58.414 40.000 0.00 0.00 34.11 1.90
848 856 5.221322 CGGTCTGGACATGATTTCTCTCATA 60.221 44.000 0.00 0.00 34.11 2.15
849 857 4.442612 CGGTCTGGACATGATTTCTCTCAT 60.443 45.833 0.00 0.00 36.29 2.90
850 858 3.118992 CGGTCTGGACATGATTTCTCTCA 60.119 47.826 0.00 0.00 0.00 3.27
851 859 3.118956 ACGGTCTGGACATGATTTCTCTC 60.119 47.826 0.00 0.00 0.00 3.20
852 860 2.834549 ACGGTCTGGACATGATTTCTCT 59.165 45.455 0.00 0.00 0.00 3.10
853 861 3.252974 ACGGTCTGGACATGATTTCTC 57.747 47.619 0.00 0.00 0.00 2.87
854 862 3.703001 AACGGTCTGGACATGATTTCT 57.297 42.857 0.00 0.00 0.00 2.52
855 863 3.306166 CGTAACGGTCTGGACATGATTTC 59.694 47.826 0.00 0.00 0.00 2.17
856 864 3.259064 CGTAACGGTCTGGACATGATTT 58.741 45.455 0.00 0.00 0.00 2.17
857 865 2.888594 CGTAACGGTCTGGACATGATT 58.111 47.619 0.00 0.00 0.00 2.57
858 866 1.470979 GCGTAACGGTCTGGACATGAT 60.471 52.381 0.00 0.00 0.00 2.45
859 867 0.108992 GCGTAACGGTCTGGACATGA 60.109 55.000 0.00 0.00 0.00 3.07
860 868 1.082117 GGCGTAACGGTCTGGACATG 61.082 60.000 3.10 0.00 0.00 3.21
861 869 1.217244 GGCGTAACGGTCTGGACAT 59.783 57.895 3.10 0.00 0.00 3.06
862 870 2.652530 GGCGTAACGGTCTGGACA 59.347 61.111 3.10 0.00 0.00 4.02
863 871 2.505557 CGGCGTAACGGTCTGGAC 60.506 66.667 0.00 0.00 0.00 4.02
864 872 4.424566 GCGGCGTAACGGTCTGGA 62.425 66.667 9.37 0.00 0.00 3.86
883 891 5.989168 TCCAACATTGATATGTATCGGTGAC 59.011 40.000 9.84 0.00 44.14 3.67
884 892 6.168270 TCCAACATTGATATGTATCGGTGA 57.832 37.500 9.84 0.00 44.14 4.02
885 893 6.128200 CCATCCAACATTGATATGTATCGGTG 60.128 42.308 0.00 0.80 44.14 4.94
886 894 5.939883 CCATCCAACATTGATATGTATCGGT 59.060 40.000 0.00 0.00 44.14 4.69
887 895 5.163723 GCCATCCAACATTGATATGTATCGG 60.164 44.000 0.00 0.00 44.14 4.18
888 896 5.645067 AGCCATCCAACATTGATATGTATCG 59.355 40.000 0.00 0.00 44.14 2.92
889 897 7.458409 AAGCCATCCAACATTGATATGTATC 57.542 36.000 0.00 0.00 44.14 2.24
890 898 7.458409 GAAGCCATCCAACATTGATATGTAT 57.542 36.000 0.00 0.00 44.14 2.29
891 899 6.882610 GAAGCCATCCAACATTGATATGTA 57.117 37.500 0.00 0.00 44.14 2.29
892 900 5.779529 GAAGCCATCCAACATTGATATGT 57.220 39.130 0.00 0.00 46.85 2.29
905 913 1.849097 CGTAACTACGGAAGCCATCC 58.151 55.000 1.25 0.00 45.30 3.51
916 924 0.527565 TCAAGGCGGACCGTAACTAC 59.472 55.000 16.73 0.00 42.76 2.73
917 925 1.477553 ATCAAGGCGGACCGTAACTA 58.522 50.000 16.73 0.00 42.76 2.24
918 926 1.135721 GTATCAAGGCGGACCGTAACT 59.864 52.381 16.73 8.85 42.76 2.24
919 927 1.564207 GTATCAAGGCGGACCGTAAC 58.436 55.000 16.73 6.51 42.76 2.50
920 928 0.101040 CGTATCAAGGCGGACCGTAA 59.899 55.000 16.73 0.00 42.76 3.18
921 929 1.729276 CGTATCAAGGCGGACCGTA 59.271 57.895 16.73 0.00 42.76 4.02
922 930 2.493030 CGTATCAAGGCGGACCGT 59.507 61.111 16.73 0.00 42.76 4.83
923 931 2.960129 GCGTATCAAGGCGGACCG 60.960 66.667 10.29 10.29 42.76 4.79
924 932 2.588034 GGCGTATCAAGGCGGACC 60.588 66.667 0.00 0.00 37.37 4.46
925 933 2.588034 GGGCGTATCAAGGCGGAC 60.588 66.667 0.00 0.00 37.37 4.79
926 934 2.762459 AGGGCGTATCAAGGCGGA 60.762 61.111 0.00 0.00 37.37 5.54
927 935 2.588877 CAGGGCGTATCAAGGCGG 60.589 66.667 0.00 0.00 37.37 6.13
928 936 0.179094 TAACAGGGCGTATCAAGGCG 60.179 55.000 0.00 0.00 37.37 5.52
929 937 1.940613 CTTAACAGGGCGTATCAAGGC 59.059 52.381 0.00 0.00 35.74 4.35
930 938 3.536956 TCTTAACAGGGCGTATCAAGG 57.463 47.619 0.00 0.00 0.00 3.61
931 939 5.411669 ACTTTTCTTAACAGGGCGTATCAAG 59.588 40.000 0.00 0.00 0.00 3.02
932 940 5.310451 ACTTTTCTTAACAGGGCGTATCAA 58.690 37.500 0.00 0.00 0.00 2.57
933 941 4.901868 ACTTTTCTTAACAGGGCGTATCA 58.098 39.130 0.00 0.00 0.00 2.15
934 942 5.870978 TGTACTTTTCTTAACAGGGCGTATC 59.129 40.000 0.00 0.00 0.00 2.24
935 943 5.797051 TGTACTTTTCTTAACAGGGCGTAT 58.203 37.500 0.00 0.00 0.00 3.06
936 944 5.212532 TGTACTTTTCTTAACAGGGCGTA 57.787 39.130 0.00 0.00 0.00 4.42
937 945 4.062991 CTGTACTTTTCTTAACAGGGCGT 58.937 43.478 0.00 0.00 36.53 5.68
938 946 3.120304 GCTGTACTTTTCTTAACAGGGCG 60.120 47.826 3.75 0.00 39.75 6.13
939 947 3.120304 CGCTGTACTTTTCTTAACAGGGC 60.120 47.826 5.61 0.00 43.14 5.19
940 948 4.663636 CGCTGTACTTTTCTTAACAGGG 57.336 45.455 4.35 4.35 43.49 4.45
941 949 5.465724 ACTTCGCTGTACTTTTCTTAACAGG 59.534 40.000 3.75 0.00 39.75 4.00
961 969 9.116067 TGGCAAGGTTATTTATACATGTACTTC 57.884 33.333 7.96 0.19 0.00 3.01
1084 1097 1.301716 CGGTGGGAGTGAACAGGTG 60.302 63.158 0.00 0.00 0.00 4.00
2059 2093 7.148540 CCTGCACCAATTAATGATTTTTCAGTG 60.149 37.037 0.00 0.00 0.00 3.66
2218 2257 0.896479 TGGGATGTCCGACTCGTTGA 60.896 55.000 0.00 0.00 38.76 3.18
2220 2259 0.246635 CTTGGGATGTCCGACTCGTT 59.753 55.000 0.00 0.00 38.76 3.85
2258 2297 3.241530 AGCGTCTCCTTGGCCACA 61.242 61.111 3.88 0.00 0.00 4.17
2800 2853 1.089920 CCGGACAGCATTCAGGAAAG 58.910 55.000 0.00 0.00 32.92 2.62
2861 2942 1.202313 GCGAGATTCGTACTCCAGCTT 60.202 52.381 0.17 0.00 42.81 3.74
2919 3002 7.041098 GCAACAATTATATGGATCGGAGAAGTT 60.041 37.037 0.00 0.00 43.58 2.66
2968 3051 4.721132 TGGGGACGAAAATTTGTAAGTCT 58.279 39.130 12.25 0.00 0.00 3.24
2974 3057 2.162809 GCGTATGGGGACGAAAATTTGT 59.837 45.455 0.00 0.00 45.82 2.83
2978 3061 0.253610 TGGCGTATGGGGACGAAAAT 59.746 50.000 0.00 0.00 45.82 1.82
2983 3066 2.869503 AAAGCTGGCGTATGGGGACG 62.870 60.000 0.00 0.00 45.70 4.79
2984 3067 1.077716 AAAGCTGGCGTATGGGGAC 60.078 57.895 0.00 0.00 0.00 4.46
2994 3077 2.202349 CGCTAACGCAAAGCTGGC 60.202 61.111 0.63 0.63 37.85 4.85
2995 3078 1.369091 ATCCGCTAACGCAAAGCTGG 61.369 55.000 0.00 5.96 37.85 4.85
2996 3079 1.258982 CTATCCGCTAACGCAAAGCTG 59.741 52.381 0.00 0.00 37.85 4.24
2997 3080 1.571919 CTATCCGCTAACGCAAAGCT 58.428 50.000 3.21 0.00 37.85 3.74
2998 3081 0.582005 CCTATCCGCTAACGCAAAGC 59.418 55.000 0.00 0.00 38.22 3.51
2999 3082 1.202486 TCCCTATCCGCTAACGCAAAG 60.202 52.381 0.00 0.00 38.22 2.77
3000 3083 0.825410 TCCCTATCCGCTAACGCAAA 59.175 50.000 0.00 0.00 38.22 3.68
3001 3084 0.825410 TTCCCTATCCGCTAACGCAA 59.175 50.000 0.00 0.00 38.22 4.85
3002 3085 0.387929 CTTCCCTATCCGCTAACGCA 59.612 55.000 0.00 0.00 38.22 5.24
3003 3086 0.672342 TCTTCCCTATCCGCTAACGC 59.328 55.000 0.00 0.00 38.22 4.84
3013 3096 1.967066 CCGCTGACTGATCTTCCCTAT 59.033 52.381 0.00 0.00 0.00 2.57
3014 3097 1.063942 TCCGCTGACTGATCTTCCCTA 60.064 52.381 0.00 0.00 0.00 3.53
3016 3099 0.179097 GTCCGCTGACTGATCTTCCC 60.179 60.000 0.37 0.00 38.53 3.97
3019 3102 0.109086 CGTGTCCGCTGACTGATCTT 60.109 55.000 9.79 0.00 42.28 2.40
3060 3150 5.127194 TGGCGGACATAGATATAGTTGGATC 59.873 44.000 0.00 0.00 0.00 3.36
3062 3152 4.412843 TGGCGGACATAGATATAGTTGGA 58.587 43.478 0.00 0.00 0.00 3.53
3063 3153 4.220821 ACTGGCGGACATAGATATAGTTGG 59.779 45.833 0.00 0.00 0.00 3.77
3064 3154 5.392767 ACTGGCGGACATAGATATAGTTG 57.607 43.478 0.00 0.00 0.00 3.16
3065 3155 7.534723 TTTACTGGCGGACATAGATATAGTT 57.465 36.000 0.00 0.00 0.00 2.24
3066 3156 7.719871 ATTTACTGGCGGACATAGATATAGT 57.280 36.000 0.00 0.00 0.00 2.12
3073 3163 8.402472 TGAATTTAAATTTACTGGCGGACATAG 58.598 33.333 14.45 0.00 0.00 2.23
3135 3234 2.278596 CATGCAATCCAGCGCTGC 60.279 61.111 31.96 21.25 37.31 5.25
3215 3317 1.641577 GACTGCCGGACTGATGTTAC 58.358 55.000 5.05 0.00 0.00 2.50
3281 3385 1.718757 GATGGCACCACCTTCATCGC 61.719 60.000 0.00 0.00 41.32 4.58
3372 3481 2.621338 CAGCGGCAGAAAGATCAGTTA 58.379 47.619 1.45 0.00 0.00 2.24
3407 3519 4.082665 AGAATCATCATGCATTCCGTCT 57.917 40.909 0.00 0.00 30.41 4.18
3464 3576 1.153005 GCAGAGGAGGCCAAGATGG 60.153 63.158 5.01 0.00 41.55 3.51
3657 3772 1.837439 AGGTTCGAGGACATATTGGCA 59.163 47.619 0.00 0.00 0.00 4.92
3663 3778 2.376109 GTGGAGAGGTTCGAGGACATA 58.624 52.381 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.