Multiple sequence alignment - TraesCS7D01G389500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G389500 chr7D 100.000 5039 0 0 1 5039 504539455 504534417 0.000000e+00 9306
1 TraesCS7D01G389500 chr7D 86.125 2018 226 32 2811 4792 504522217 504520218 0.000000e+00 2126
2 TraesCS7D01G389500 chr7D 82.485 2398 284 64 2464 4770 504546416 504544064 0.000000e+00 1977
3 TraesCS7D01G389500 chr7D 81.874 982 152 18 3066 4040 504252571 504251609 0.000000e+00 804
4 TraesCS7D01G389500 chr7D 83.759 548 51 17 838 1351 504524563 504524020 7.580000e-133 484
5 TraesCS7D01G389500 chr7D 81.500 600 92 12 155 745 82610244 82609655 4.560000e-130 475
6 TraesCS7D01G389500 chr7D 80.333 600 93 16 164 758 630507953 630507374 1.000000e-116 431
7 TraesCS7D01G389500 chr7D 88.302 265 31 0 1788 2052 504253780 504253516 8.140000e-83 318
8 TraesCS7D01G389500 chr7D 87.544 281 17 6 1781 2061 504523592 504523330 4.900000e-80 309
9 TraesCS7D01G389500 chr7D 88.168 262 20 5 2485 2735 504522948 504522687 8.200000e-78 302
10 TraesCS7D01G389500 chr7D 93.443 183 12 0 2814 2996 504252789 504252607 6.430000e-69 272
11 TraesCS7D01G389500 chr7D 92.614 176 13 0 1786 1961 504762688 504762513 2.330000e-63 254
12 TraesCS7D01G389500 chr7D 82.773 238 28 7 2199 2428 504762292 504762060 3.080000e-47 200
13 TraesCS7D01G389500 chr7A 97.315 2868 72 4 1768 4630 572237864 572234997 0.000000e+00 4865
14 TraesCS7D01G389500 chr7A 85.169 2016 238 32 2819 4792 572182441 572180445 0.000000e+00 2010
15 TraesCS7D01G389500 chr7A 81.606 984 150 21 3066 4040 571937948 571936987 0.000000e+00 785
16 TraesCS7D01G389500 chr7A 91.367 417 34 2 4625 5039 572193339 572192923 2.040000e-158 569
17 TraesCS7D01G389500 chr7A 81.354 724 72 32 838 1525 572185798 572185102 9.610000e-147 531
18 TraesCS7D01G389500 chr7A 85.127 511 47 13 1045 1554 572238508 572238026 3.500000e-136 496
19 TraesCS7D01G389500 chr7A 93.502 277 18 0 1781 2057 572184720 572184444 3.630000e-111 412
20 TraesCS7D01G389500 chr7A 87.833 263 32 0 1788 2050 571939159 571938897 4.900000e-80 309
21 TraesCS7D01G389500 chr7A 89.238 223 20 3 2516 2735 572183137 572182916 4.970000e-70 276
22 TraesCS7D01G389500 chr7A 93.478 184 11 1 2814 2996 571938167 571937984 6.430000e-69 272
23 TraesCS7D01G389500 chr7A 93.923 181 8 2 838 1015 572238831 572238651 2.310000e-68 270
24 TraesCS7D01G389500 chr7B 93.093 2331 137 14 2330 4642 532463653 532461329 0.000000e+00 3391
25 TraesCS7D01G389500 chr7B 94.512 1403 51 9 930 2329 532465240 532463861 0.000000e+00 2141
26 TraesCS7D01G389500 chr7B 82.997 1435 170 41 3393 4770 532469033 532467616 0.000000e+00 1230
27 TraesCS7D01G389500 chr7B 86.908 1077 103 14 2175 3221 532483182 532482114 0.000000e+00 1173
28 TraesCS7D01G389500 chr7B 81.800 978 153 17 3071 4040 532290411 532289451 0.000000e+00 797
29 TraesCS7D01G389500 chr7B 86.454 753 58 26 838 1559 532484964 532484225 0.000000e+00 785
30 TraesCS7D01G389500 chr7B 82.323 594 86 16 166 751 690023444 690024026 9.740000e-137 497
31 TraesCS7D01G389500 chr7B 94.792 288 11 3 1786 2069 532483879 532483592 3.580000e-121 446
32 TraesCS7D01G389500 chr7B 88.593 263 30 0 1790 2052 532291986 532291724 2.260000e-83 320
33 TraesCS7D01G389500 chr7B 92.896 183 13 0 2814 2996 532290634 532290452 2.990000e-67 267
34 TraesCS7D01G389500 chr7B 86.777 121 14 2 4913 5031 743043274 743043394 3.160000e-27 134
35 TraesCS7D01G389500 chr6B 83.979 568 75 7 167 727 493356262 493355704 9.610000e-147 531
36 TraesCS7D01G389500 chr6B 78.113 265 52 6 1046 1307 234149561 234149822 4.040000e-36 163
37 TraesCS7D01G389500 chr6B 86.555 119 16 0 2566 2684 234153514 234153632 1.140000e-26 132
38 TraesCS7D01G389500 chr4D 82.919 603 86 8 164 758 745150 745743 1.240000e-145 527
39 TraesCS7D01G389500 chr2D 83.333 588 81 8 164 744 513034730 513035307 1.240000e-145 527
40 TraesCS7D01G389500 chr2D 83.113 604 75 17 167 758 638304965 638305553 4.470000e-145 525
41 TraesCS7D01G389500 chr6D 81.169 616 100 7 150 758 291218789 291218183 9.810000e-132 481
42 TraesCS7D01G389500 chr6D 77.011 261 54 6 1046 1303 135426563 135426820 1.460000e-30 145
43 TraesCS7D01G389500 chr5B 79.675 615 100 16 155 758 547274561 547273961 2.170000e-113 420
44 TraesCS7D01G389500 chr2B 78.191 619 78 27 150 761 40340438 40339870 4.830000e-90 342
45 TraesCS7D01G389500 chr2B 91.176 102 8 1 4931 5031 500742665 500742564 2.450000e-28 137
46 TraesCS7D01G389500 chr3B 80.695 259 48 2 1791 2048 792861475 792861732 3.080000e-47 200
47 TraesCS7D01G389500 chr3B 77.907 258 57 0 1791 2048 28317027 28316770 1.450000e-35 161
48 TraesCS7D01G389500 chr3A 79.070 258 54 0 1791 2048 11760370 11760627 1.440000e-40 178
49 TraesCS7D01G389500 chr6A 78.113 265 52 6 1046 1307 176980615 176980876 4.040000e-36 163
50 TraesCS7D01G389500 chr3D 87.407 135 15 2 4781 4913 523715855 523715989 2.430000e-33 154
51 TraesCS7D01G389500 chr3D 91.176 102 8 1 4931 5031 63498446 63498345 2.450000e-28 137
52 TraesCS7D01G389500 chr2A 91.176 102 8 1 4931 5031 735149766 735149867 2.450000e-28 137
53 TraesCS7D01G389500 chr2A 91.176 102 8 1 4931 5031 755500600 755500499 2.450000e-28 137
54 TraesCS7D01G389500 chr1D 91.176 102 8 1 4931 5031 185751436 185751335 2.450000e-28 137
55 TraesCS7D01G389500 chr1B 91.176 102 8 1 4931 5031 583523796 583523695 2.450000e-28 137
56 TraesCS7D01G389500 chr1B 91.176 102 8 1 4931 5031 683721170 683721069 2.450000e-28 137


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G389500 chr7D 504534417 504539455 5038 True 9306.000000 9306 100.000000 1 5039 1 chr7D.!!$R2 5038
1 TraesCS7D01G389500 chr7D 504544064 504546416 2352 True 1977.000000 1977 82.485000 2464 4770 1 chr7D.!!$R3 2306
2 TraesCS7D01G389500 chr7D 504520218 504524563 4345 True 805.250000 2126 86.399000 838 4792 4 chr7D.!!$R6 3954
3 TraesCS7D01G389500 chr7D 82609655 82610244 589 True 475.000000 475 81.500000 155 745 1 chr7D.!!$R1 590
4 TraesCS7D01G389500 chr7D 504251609 504253780 2171 True 464.666667 804 87.873000 1788 4040 3 chr7D.!!$R5 2252
5 TraesCS7D01G389500 chr7D 630507374 630507953 579 True 431.000000 431 80.333000 164 758 1 chr7D.!!$R4 594
6 TraesCS7D01G389500 chr7D 504762060 504762688 628 True 227.000000 254 87.693500 1786 2428 2 chr7D.!!$R7 642
7 TraesCS7D01G389500 chr7A 572234997 572238831 3834 True 1877.000000 4865 92.121667 838 4630 3 chr7A.!!$R4 3792
8 TraesCS7D01G389500 chr7A 572180445 572185798 5353 True 807.250000 2010 87.315750 838 4792 4 chr7A.!!$R3 3954
9 TraesCS7D01G389500 chr7A 571936987 571939159 2172 True 455.333333 785 87.639000 1788 4040 3 chr7A.!!$R2 2252
10 TraesCS7D01G389500 chr7B 532461329 532469033 7704 True 2254.000000 3391 90.200667 930 4770 3 chr7B.!!$R2 3840
11 TraesCS7D01G389500 chr7B 532482114 532484964 2850 True 801.333333 1173 89.384667 838 3221 3 chr7B.!!$R3 2383
12 TraesCS7D01G389500 chr7B 690023444 690024026 582 False 497.000000 497 82.323000 166 751 1 chr7B.!!$F1 585
13 TraesCS7D01G389500 chr7B 532289451 532291986 2535 True 461.333333 797 87.763000 1790 4040 3 chr7B.!!$R1 2250
14 TraesCS7D01G389500 chr6B 493355704 493356262 558 True 531.000000 531 83.979000 167 727 1 chr6B.!!$R1 560
15 TraesCS7D01G389500 chr4D 745150 745743 593 False 527.000000 527 82.919000 164 758 1 chr4D.!!$F1 594
16 TraesCS7D01G389500 chr2D 513034730 513035307 577 False 527.000000 527 83.333000 164 744 1 chr2D.!!$F1 580
17 TraesCS7D01G389500 chr2D 638304965 638305553 588 False 525.000000 525 83.113000 167 758 1 chr2D.!!$F2 591
18 TraesCS7D01G389500 chr6D 291218183 291218789 606 True 481.000000 481 81.169000 150 758 1 chr6D.!!$R1 608
19 TraesCS7D01G389500 chr5B 547273961 547274561 600 True 420.000000 420 79.675000 155 758 1 chr5B.!!$R1 603
20 TraesCS7D01G389500 chr2B 40339870 40340438 568 True 342.000000 342 78.191000 150 761 1 chr2B.!!$R1 611

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
804 816 0.107557 TCCCGCCGTTAAAATCCCTC 60.108 55.000 0.00 0.0 0.00 4.30 F
828 840 0.179108 GCGGTTAGTACAGGCAGAGG 60.179 60.000 0.00 0.0 0.00 3.69 F
977 3927 0.319555 AGAGCGTACGCAGAAAAGCA 60.320 50.000 38.58 0.0 44.88 3.91 F
1661 4853 0.883153 AGTACACATGCCGTACGTGA 59.117 50.000 15.21 0.0 43.24 4.35 F
1725 5074 1.081242 GCGTTGTTGATGCACCCAG 60.081 57.895 0.00 0.0 40.14 4.45 F
3370 9406 1.265635 GCAAGGTTGTCGCACACATTA 59.734 47.619 0.00 0.0 33.90 1.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1644 4836 0.883153 ACTCACGTACGGCATGTGTA 59.117 50.000 21.06 0.00 43.53 2.90 R
1645 4837 0.883153 TACTCACGTACGGCATGTGT 59.117 50.000 21.06 16.77 43.53 3.72 R
2289 6024 1.080772 GCACTTTTACGGCCAAGCC 60.081 57.895 2.24 0.00 46.75 4.35 R
3370 9406 3.073062 AGGCAGTAGAACACAAAGGTCAT 59.927 43.478 0.00 0.00 35.97 3.06 R
3564 9600 8.898792 CATGTTAATATGCATCTTTCATTGTCG 58.101 33.333 0.19 0.00 0.00 4.35 R
4967 11103 0.101759 TCGCCTATTACACGGCTCAC 59.898 55.000 0.00 0.00 44.11 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 9.255029 AGAAACCCAATGTAATAATAAGCAAGT 57.745 29.630 0.00 0.00 0.00 3.16
45 46 3.452755 AAGCAAGTAACAAAAGGTGGC 57.547 42.857 0.00 0.00 0.00 5.01
47 48 1.766069 CAAGTAACAAAAGGTGGCGC 58.234 50.000 0.00 0.00 0.00 6.53
49 50 1.728074 GTAACAAAAGGTGGCGCGC 60.728 57.895 25.94 25.94 0.00 6.86
50 51 1.894756 TAACAAAAGGTGGCGCGCT 60.895 52.632 32.29 8.16 0.00 5.92
52 53 4.705519 CAAAAGGTGGCGCGCTGG 62.706 66.667 32.29 2.81 0.00 4.85
89 90 2.943653 CCACAAGCGTTCGGGTTC 59.056 61.111 0.00 0.00 33.12 3.62
90 91 2.549282 CACAAGCGTTCGGGTTCG 59.451 61.111 0.00 0.00 33.12 3.95
91 92 1.952133 CACAAGCGTTCGGGTTCGA 60.952 57.895 0.00 0.00 44.44 3.71
101 102 1.541379 TCGGGTTCGAATCTGACAGA 58.459 50.000 16.05 7.80 43.03 3.41
103 104 1.630148 GGGTTCGAATCTGACAGACG 58.370 55.000 7.47 8.22 0.00 4.18
104 105 0.992802 GGTTCGAATCTGACAGACGC 59.007 55.000 7.47 1.77 0.00 5.19
105 106 0.992802 GTTCGAATCTGACAGACGCC 59.007 55.000 7.47 0.00 0.00 5.68
106 107 0.601057 TTCGAATCTGACAGACGCCA 59.399 50.000 7.47 0.00 0.00 5.69
107 108 0.109272 TCGAATCTGACAGACGCCAC 60.109 55.000 7.47 0.00 0.00 5.01
108 109 0.109086 CGAATCTGACAGACGCCACT 60.109 55.000 7.47 0.00 0.00 4.00
109 110 1.354040 GAATCTGACAGACGCCACTG 58.646 55.000 7.47 0.00 42.78 3.66
117 118 1.808411 CAGACGCCACTGTACCAATT 58.192 50.000 0.00 0.00 33.73 2.32
119 120 2.095768 CAGACGCCACTGTACCAATTTG 60.096 50.000 0.00 0.00 33.73 2.32
120 121 1.877443 GACGCCACTGTACCAATTTGT 59.123 47.619 0.00 0.00 0.00 2.83
121 122 1.877443 ACGCCACTGTACCAATTTGTC 59.123 47.619 0.00 0.00 0.00 3.18
122 123 1.876799 CGCCACTGTACCAATTTGTCA 59.123 47.619 0.00 0.00 0.00 3.58
123 124 2.350388 CGCCACTGTACCAATTTGTCAC 60.350 50.000 0.00 0.00 0.00 3.67
124 125 2.030274 GCCACTGTACCAATTTGTCACC 60.030 50.000 0.00 0.00 0.00 4.02
128 129 4.695455 CACTGTACCAATTTGTCACCCTAG 59.305 45.833 0.00 0.00 0.00 3.02
129 130 3.681593 TGTACCAATTTGTCACCCTAGC 58.318 45.455 0.00 0.00 0.00 3.42
131 132 1.710809 ACCAATTTGTCACCCTAGCCT 59.289 47.619 0.00 0.00 0.00 4.58
132 133 2.290960 ACCAATTTGTCACCCTAGCCTC 60.291 50.000 0.00 0.00 0.00 4.70
133 134 2.290896 CCAATTTGTCACCCTAGCCTCA 60.291 50.000 0.00 0.00 0.00 3.86
134 135 3.420893 CAATTTGTCACCCTAGCCTCAA 58.579 45.455 0.00 0.00 0.00 3.02
135 136 4.019174 CAATTTGTCACCCTAGCCTCAAT 58.981 43.478 0.00 0.00 0.00 2.57
136 137 3.806949 TTTGTCACCCTAGCCTCAATT 57.193 42.857 0.00 0.00 0.00 2.32
137 138 2.787473 TGTCACCCTAGCCTCAATTG 57.213 50.000 0.00 0.00 0.00 2.32
139 140 2.290260 TGTCACCCTAGCCTCAATTGTG 60.290 50.000 5.13 2.61 0.00 3.33
140 141 1.281867 TCACCCTAGCCTCAATTGTGG 59.718 52.381 20.01 20.01 0.00 4.17
141 142 1.004745 CACCCTAGCCTCAATTGTGGT 59.995 52.381 23.73 15.36 0.00 4.16
143 144 3.117888 CACCCTAGCCTCAATTGTGGTAT 60.118 47.826 23.73 16.49 0.00 2.73
144 145 3.136626 ACCCTAGCCTCAATTGTGGTATC 59.863 47.826 23.73 10.52 0.00 2.24
145 146 3.136443 CCCTAGCCTCAATTGTGGTATCA 59.864 47.826 23.73 9.03 0.00 2.15
146 147 4.385199 CCCTAGCCTCAATTGTGGTATCAA 60.385 45.833 23.73 7.88 0.00 2.57
147 148 4.576463 CCTAGCCTCAATTGTGGTATCAAC 59.424 45.833 23.73 9.28 0.00 3.18
148 149 4.307032 AGCCTCAATTGTGGTATCAACT 57.693 40.909 23.73 11.12 0.00 3.16
152 153 5.183904 GCCTCAATTGTGGTATCAACTTCTT 59.816 40.000 23.73 0.00 0.00 2.52
173 176 3.238597 TGCAAGGCAATTAGGGAAAACT 58.761 40.909 0.00 0.00 34.76 2.66
217 220 2.044946 GCCCGTGGATTTGCCTCT 60.045 61.111 0.00 0.00 37.63 3.69
222 225 0.807667 CGTGGATTTGCCTCTCCTCG 60.808 60.000 5.87 5.87 40.71 4.63
326 337 1.005924 GGGTGACATTTGGAGGATGGT 59.994 52.381 0.00 0.00 0.00 3.55
337 348 0.678048 GAGGATGGTGGCGCTTCTTT 60.678 55.000 7.64 0.00 0.00 2.52
341 352 0.603065 ATGGTGGCGCTTCTTTTTCC 59.397 50.000 7.64 0.00 0.00 3.13
433 444 3.473647 CATGCCAGCTCCTCGGGA 61.474 66.667 0.00 0.00 31.00 5.14
483 495 5.560148 CGTAAGCAACAGTGATATTTGGTC 58.440 41.667 0.00 0.00 30.82 4.02
484 496 5.447279 CGTAAGCAACAGTGATATTTGGTCC 60.447 44.000 0.00 0.00 30.82 4.46
552 564 2.124695 GGGCGCTTGGTCCTTAGG 60.125 66.667 7.64 0.00 37.47 2.69
553 565 2.124695 GGCGCTTGGTCCTTAGGG 60.125 66.667 7.64 0.00 0.00 3.53
554 566 2.124695 GCGCTTGGTCCTTAGGGG 60.125 66.667 0.00 0.00 0.00 4.79
557 569 1.378646 GCTTGGTCCTTAGGGGCAC 60.379 63.158 0.00 0.00 39.39 5.01
736 748 6.811954 AGGTGTTTTGTAATTTCGGTGAATT 58.188 32.000 0.00 0.00 33.95 2.17
789 801 2.992124 TATGGTACCAACATGTCCCG 57.008 50.000 20.76 0.00 0.00 5.14
791 803 1.747745 GGTACCAACATGTCCCGCC 60.748 63.158 7.15 0.00 0.00 6.13
793 805 2.585341 TACCAACATGTCCCGCCGT 61.585 57.895 0.00 0.00 0.00 5.68
794 806 2.114488 TACCAACATGTCCCGCCGTT 62.114 55.000 0.00 0.00 0.00 4.44
796 808 0.956410 CCAACATGTCCCGCCGTTAA 60.956 55.000 0.00 0.00 0.00 2.01
798 810 1.267261 CAACATGTCCCGCCGTTAAAA 59.733 47.619 0.00 0.00 0.00 1.52
799 811 1.828979 ACATGTCCCGCCGTTAAAAT 58.171 45.000 0.00 0.00 0.00 1.82
800 812 1.741145 ACATGTCCCGCCGTTAAAATC 59.259 47.619 0.00 0.00 0.00 2.17
802 814 0.677414 TGTCCCGCCGTTAAAATCCC 60.677 55.000 0.00 0.00 0.00 3.85
803 815 0.393402 GTCCCGCCGTTAAAATCCCT 60.393 55.000 0.00 0.00 0.00 4.20
804 816 0.107557 TCCCGCCGTTAAAATCCCTC 60.108 55.000 0.00 0.00 0.00 4.30
805 817 1.433837 CCCGCCGTTAAAATCCCTCG 61.434 60.000 0.00 0.00 0.00 4.63
806 818 0.460635 CCGCCGTTAAAATCCCTCGA 60.461 55.000 0.00 0.00 0.00 4.04
808 820 0.656259 GCCGTTAAAATCCCTCGAGC 59.344 55.000 6.99 0.00 0.00 5.03
809 821 0.928229 CCGTTAAAATCCCTCGAGCG 59.072 55.000 6.99 0.00 0.00 5.03
810 822 0.300789 CGTTAAAATCCCTCGAGCGC 59.699 55.000 6.99 0.00 0.00 5.92
811 823 0.300789 GTTAAAATCCCTCGAGCGCG 59.699 55.000 6.99 2.41 39.35 6.86
812 824 0.808453 TTAAAATCCCTCGAGCGCGG 60.808 55.000 10.69 3.05 38.28 6.46
814 826 2.798148 AAAATCCCTCGAGCGCGGTT 62.798 55.000 14.00 0.00 38.28 4.44
815 827 1.952102 AAATCCCTCGAGCGCGGTTA 61.952 55.000 14.00 2.80 38.28 2.85
818 830 2.475466 CCCTCGAGCGCGGTTAGTA 61.475 63.158 14.00 0.00 38.28 1.82
819 831 1.298190 CCTCGAGCGCGGTTAGTAC 60.298 63.158 14.00 0.00 38.28 2.73
820 832 1.426621 CTCGAGCGCGGTTAGTACA 59.573 57.895 14.00 0.00 38.28 2.90
821 833 0.589229 CTCGAGCGCGGTTAGTACAG 60.589 60.000 14.00 0.01 38.28 2.74
822 834 1.585521 CGAGCGCGGTTAGTACAGG 60.586 63.158 14.00 0.00 0.00 4.00
823 835 1.877165 GAGCGCGGTTAGTACAGGC 60.877 63.158 14.00 0.00 0.00 4.85
824 836 2.125832 GCGCGGTTAGTACAGGCA 60.126 61.111 8.83 0.00 0.00 4.75
825 837 2.165301 GCGCGGTTAGTACAGGCAG 61.165 63.158 8.83 0.00 0.00 4.85
826 838 1.509463 CGCGGTTAGTACAGGCAGA 59.491 57.895 0.00 0.00 0.00 4.26
827 839 0.525668 CGCGGTTAGTACAGGCAGAG 60.526 60.000 0.00 0.00 0.00 3.35
828 840 0.179108 GCGGTTAGTACAGGCAGAGG 60.179 60.000 0.00 0.00 0.00 3.69
829 841 1.471119 CGGTTAGTACAGGCAGAGGA 58.529 55.000 0.00 0.00 0.00 3.71
830 842 2.032620 CGGTTAGTACAGGCAGAGGAT 58.967 52.381 0.00 0.00 0.00 3.24
831 843 2.034812 CGGTTAGTACAGGCAGAGGATC 59.965 54.545 0.00 0.00 0.00 3.36
878 890 2.985282 CACTGGCACCCGCATTGT 60.985 61.111 0.00 0.00 41.24 2.71
971 3921 3.052620 GAGGCAGAGCGTACGCAGA 62.053 63.158 38.58 0.00 44.88 4.26
977 3927 0.319555 AGAGCGTACGCAGAAAAGCA 60.320 50.000 38.58 0.00 44.88 3.91
993 3943 2.127270 CAAAGCGCGCGATTGTGT 60.127 55.556 35.15 16.61 0.00 3.72
994 3944 2.127270 AAAGCGCGCGATTGTGTG 60.127 55.556 35.15 1.40 39.10 3.82
999 3949 4.505217 GCGCGATTGTGTGCCGAG 62.505 66.667 12.10 0.00 39.42 4.63
1000 3950 2.809174 CGCGATTGTGTGCCGAGA 60.809 61.111 0.00 0.00 0.00 4.04
1001 3951 2.167219 CGCGATTGTGTGCCGAGAT 61.167 57.895 0.00 0.00 0.00 2.75
1002 3952 1.349627 GCGATTGTGTGCCGAGATG 59.650 57.895 0.00 0.00 0.00 2.90
1003 3953 2.009108 CGATTGTGTGCCGAGATGG 58.991 57.895 0.00 0.00 42.50 3.51
1131 4110 1.061411 CATGTCCGCGATGCTGTTG 59.939 57.895 8.23 0.00 0.00 3.33
1362 4342 2.168521 TGCATCCTTGGCTGACTACTAC 59.831 50.000 0.00 0.00 0.00 2.73
1386 4366 0.961753 TCTGCTTCGCTGTTCTCTGA 59.038 50.000 0.00 0.00 0.00 3.27
1527 4515 4.529377 AGACCCTGTCGTCAAGGTAAATTA 59.471 41.667 2.79 0.00 38.38 1.40
1566 4758 3.616956 TTTGTCATAGGCAGTCTGGAG 57.383 47.619 1.14 0.00 0.00 3.86
1576 4768 1.266718 GCAGTCTGGAGCTAGATCGAG 59.733 57.143 13.27 13.27 0.00 4.04
1643 4835 2.683867 CCGTGAACAGAGGGAGTAGTAG 59.316 54.545 0.00 0.00 0.00 2.57
1644 4836 3.345414 CGTGAACAGAGGGAGTAGTAGT 58.655 50.000 0.00 0.00 0.00 2.73
1645 4837 4.511527 CGTGAACAGAGGGAGTAGTAGTA 58.488 47.826 0.00 0.00 0.00 1.82
1647 4839 5.251764 GTGAACAGAGGGAGTAGTAGTACA 58.748 45.833 10.33 0.00 0.00 2.90
1648 4840 5.123661 GTGAACAGAGGGAGTAGTAGTACAC 59.876 48.000 10.33 3.67 0.00 2.90
1649 4841 4.923516 ACAGAGGGAGTAGTAGTACACA 57.076 45.455 10.33 0.00 0.00 3.72
1650 4842 5.453866 ACAGAGGGAGTAGTAGTACACAT 57.546 43.478 10.33 0.37 0.00 3.21
1652 4844 4.036971 CAGAGGGAGTAGTAGTACACATGC 59.963 50.000 10.33 0.00 0.00 4.06
1653 4845 3.297736 AGGGAGTAGTAGTACACATGCC 58.702 50.000 10.33 4.47 0.00 4.40
1656 4848 3.879295 GGAGTAGTAGTACACATGCCGTA 59.121 47.826 10.33 0.00 0.00 4.02
1657 4849 4.260948 GGAGTAGTAGTACACATGCCGTAC 60.261 50.000 15.06 15.06 39.64 3.67
1658 4850 2.838386 AGTAGTACACATGCCGTACG 57.162 50.000 8.69 8.69 43.24 3.67
1661 4853 0.883153 AGTACACATGCCGTACGTGA 59.117 50.000 15.21 0.00 43.24 4.35
1725 5074 1.081242 GCGTTGTTGATGCACCCAG 60.081 57.895 0.00 0.00 40.14 4.45
1748 5097 4.563976 GCATGCATTGACAGTAATCAAACC 59.436 41.667 14.21 0.00 41.78 3.27
1749 5098 4.418013 TGCATTGACAGTAATCAAACCG 57.582 40.909 0.00 0.00 41.78 4.44
1750 5099 3.818210 TGCATTGACAGTAATCAAACCGT 59.182 39.130 0.00 0.00 41.78 4.83
1751 5100 4.083537 TGCATTGACAGTAATCAAACCGTC 60.084 41.667 0.00 0.00 41.78 4.79
1752 5101 4.083537 GCATTGACAGTAATCAAACCGTCA 60.084 41.667 0.00 0.00 41.78 4.35
1753 5102 5.561919 GCATTGACAGTAATCAAACCGTCAA 60.562 40.000 7.90 7.90 45.75 3.18
1754 5103 6.434596 CATTGACAGTAATCAAACCGTCAAA 58.565 36.000 9.17 0.00 45.17 2.69
1755 5104 5.412526 TGACAGTAATCAAACCGTCAAAC 57.587 39.130 0.00 0.00 34.64 2.93
2111 5498 3.120718 CGGCAAACATTGTTATTTGTGCC 60.121 43.478 23.35 23.35 37.96 5.01
2153 5541 7.271223 CGAAATTGCAATAACTGAAATCGTCTT 59.729 33.333 13.39 0.00 31.32 3.01
2742 7951 9.883142 TTCTGTGTGTTTCCTTTTTATCATTTT 57.117 25.926 0.00 0.00 0.00 1.82
3229 9257 5.578157 AAATAAGGTCACTTACACCAGGT 57.422 39.130 0.00 0.00 41.68 4.00
3277 9312 7.607991 ACATGCAGAATTTACTTGCTAACTAGT 59.392 33.333 0.00 0.00 35.90 2.57
3370 9406 1.265635 GCAAGGTTGTCGCACACATTA 59.734 47.619 0.00 0.00 33.90 1.90
3564 9600 7.336931 TGATGAACCTATGCTTCCTAACTTTTC 59.663 37.037 0.00 0.00 0.00 2.29
3935 9976 4.391216 CCTCTTCATTTGCGGATGCTATAG 59.609 45.833 0.00 0.00 43.34 1.31
4047 10088 3.196685 TCGTCACACAATGATGGTATCCA 59.803 43.478 0.00 0.00 43.60 3.41
4059 10100 9.123902 CAATGATGGTATCCATTCTGAGTTTAA 57.876 33.333 2.71 0.00 45.26 1.52
4290 10383 7.008992 GCATCACTGTAGCAAAAAGAAATGATC 59.991 37.037 0.00 0.00 0.00 2.92
4373 10477 6.295039 TGTTAAGGAAGAAAGTAAAGTGCG 57.705 37.500 0.00 0.00 0.00 5.34
4374 10478 3.898517 AAGGAAGAAAGTAAAGTGCGC 57.101 42.857 0.00 0.00 0.00 6.09
4567 10688 4.963318 TCTCTTGTTGAGTTCACTGGAT 57.037 40.909 0.00 0.00 43.13 3.41
4716 10851 5.940470 GGATTATATTACTGAGCCTTGTGGG 59.060 44.000 0.00 0.00 38.36 4.61
4728 10863 2.995466 CTTGTGGGCAAGTACATGTG 57.005 50.000 9.11 0.00 45.18 3.21
4743 10878 5.830991 AGTACATGTGGTGGTACAAATTTGT 59.169 36.000 25.99 25.99 44.16 2.83
4745 10880 6.716934 ACATGTGGTGGTACAAATTTGTAA 57.283 33.333 28.05 14.26 44.46 2.41
4753 10888 6.915843 GGTGGTACAAATTTGTAAGACAAGTG 59.084 38.462 28.05 0.00 44.46 3.16
4754 10889 7.201750 GGTGGTACAAATTTGTAAGACAAGTGA 60.202 37.037 28.05 5.88 44.46 3.41
4812 10948 8.230472 CCATTCTATAAATGGGGCTTGATATC 57.770 38.462 8.61 0.00 42.63 1.63
4813 10949 8.057623 CCATTCTATAAATGGGGCTTGATATCT 58.942 37.037 8.61 0.00 42.63 1.98
4814 10950 9.471702 CATTCTATAAATGGGGCTTGATATCTT 57.528 33.333 3.98 0.00 0.00 2.40
4815 10951 9.692325 ATTCTATAAATGGGGCTTGATATCTTC 57.308 33.333 3.98 0.00 0.00 2.87
4816 10952 8.218423 TCTATAAATGGGGCTTGATATCTTCA 57.782 34.615 3.98 0.00 0.00 3.02
4817 10953 8.103305 TCTATAAATGGGGCTTGATATCTTCAC 58.897 37.037 3.98 0.00 32.84 3.18
4818 10954 4.803329 AATGGGGCTTGATATCTTCACT 57.197 40.909 3.98 0.00 32.84 3.41
4819 10955 4.803329 ATGGGGCTTGATATCTTCACTT 57.197 40.909 3.98 0.00 32.84 3.16
4820 10956 4.156455 TGGGGCTTGATATCTTCACTTC 57.844 45.455 3.98 0.00 32.84 3.01
4821 10957 3.523157 TGGGGCTTGATATCTTCACTTCA 59.477 43.478 3.98 0.00 32.84 3.02
4822 10958 4.166725 TGGGGCTTGATATCTTCACTTCAT 59.833 41.667 3.98 0.00 32.84 2.57
4823 10959 4.759183 GGGGCTTGATATCTTCACTTCATC 59.241 45.833 3.98 0.00 32.84 2.92
4824 10960 5.371526 GGGCTTGATATCTTCACTTCATCA 58.628 41.667 3.98 0.00 32.84 3.07
4825 10961 6.002704 GGGCTTGATATCTTCACTTCATCAT 58.997 40.000 3.98 0.00 32.84 2.45
4826 10962 6.072618 GGGCTTGATATCTTCACTTCATCATG 60.073 42.308 3.98 0.00 32.84 3.07
4827 10963 6.709397 GGCTTGATATCTTCACTTCATCATGA 59.291 38.462 0.00 0.00 32.84 3.07
4828 10964 7.228108 GGCTTGATATCTTCACTTCATCATGAA 59.772 37.037 0.00 0.00 34.79 2.57
4829 10965 8.784994 GCTTGATATCTTCACTTCATCATGAAT 58.215 33.333 0.00 0.00 35.59 2.57
4837 10973 9.895138 TCTTCACTTCATCATGAATAAATGAGA 57.105 29.630 0.00 0.00 39.84 3.27
4840 10976 9.676861 TCACTTCATCATGAATAAATGAGAACT 57.323 29.630 0.00 0.00 39.84 3.01
4844 10980 9.617523 TTCATCATGAATAAATGAGAACTAGCA 57.382 29.630 0.00 0.00 39.84 3.49
4845 10981 9.049523 TCATCATGAATAAATGAGAACTAGCAC 57.950 33.333 0.00 0.00 39.84 4.40
4846 10982 8.833493 CATCATGAATAAATGAGAACTAGCACA 58.167 33.333 0.00 0.00 39.84 4.57
4847 10983 8.201554 TCATGAATAAATGAGAACTAGCACAC 57.798 34.615 0.00 0.00 32.75 3.82
4848 10984 7.823799 TCATGAATAAATGAGAACTAGCACACA 59.176 33.333 0.00 0.00 32.75 3.72
4849 10985 8.618677 CATGAATAAATGAGAACTAGCACACAT 58.381 33.333 0.00 0.00 0.00 3.21
4850 10986 8.201554 TGAATAAATGAGAACTAGCACACATC 57.798 34.615 0.00 0.00 0.00 3.06
4851 10987 6.834959 ATAAATGAGAACTAGCACACATCG 57.165 37.500 0.00 0.00 0.00 3.84
4852 10988 1.996292 TGAGAACTAGCACACATCGC 58.004 50.000 0.00 0.00 0.00 4.58
4853 10989 1.281899 GAGAACTAGCACACATCGCC 58.718 55.000 0.00 0.00 0.00 5.54
4854 10990 0.608130 AGAACTAGCACACATCGCCA 59.392 50.000 0.00 0.00 0.00 5.69
4855 10991 1.208052 AGAACTAGCACACATCGCCAT 59.792 47.619 0.00 0.00 0.00 4.40
4856 10992 1.328680 GAACTAGCACACATCGCCATG 59.671 52.381 0.00 0.00 35.92 3.66
4857 10993 0.462581 ACTAGCACACATCGCCATGG 60.463 55.000 7.63 7.63 33.82 3.66
4858 10994 0.179076 CTAGCACACATCGCCATGGA 60.179 55.000 18.40 0.00 33.82 3.41
4859 10995 0.469494 TAGCACACATCGCCATGGAT 59.531 50.000 18.40 0.00 33.82 3.41
4861 10997 1.357690 CACACATCGCCATGGATGC 59.642 57.895 18.40 0.00 46.11 3.91
4862 10998 1.099295 CACACATCGCCATGGATGCT 61.099 55.000 18.40 0.00 46.11 3.79
4863 10999 1.099295 ACACATCGCCATGGATGCTG 61.099 55.000 18.40 11.19 46.11 4.41
4864 11000 2.191513 ACATCGCCATGGATGCTGC 61.192 57.895 18.40 0.00 46.11 5.25
4865 11001 2.190841 CATCGCCATGGATGCTGCA 61.191 57.895 18.40 4.13 37.59 4.41
4866 11002 1.454295 ATCGCCATGGATGCTGCAA 60.454 52.632 18.40 0.00 0.00 4.08
4867 11003 1.731433 ATCGCCATGGATGCTGCAAC 61.731 55.000 18.40 3.28 0.00 4.17
4868 11004 2.497770 GCCATGGATGCTGCAACC 59.502 61.111 20.72 20.72 0.00 3.77
4869 11005 2.352821 GCCATGGATGCTGCAACCA 61.353 57.895 29.96 29.96 40.43 3.67
4870 11006 1.514087 CCATGGATGCTGCAACCAC 59.486 57.895 30.35 10.91 39.04 4.16
4871 11007 1.252215 CCATGGATGCTGCAACCACA 61.252 55.000 30.35 15.84 39.04 4.17
4872 11008 0.604073 CATGGATGCTGCAACCACAA 59.396 50.000 30.35 11.47 39.04 3.33
4873 11009 1.001068 CATGGATGCTGCAACCACAAA 59.999 47.619 30.35 11.11 39.04 2.83
4874 11010 0.388659 TGGATGCTGCAACCACAAAC 59.611 50.000 25.42 1.42 31.41 2.93
4875 11011 0.388659 GGATGCTGCAACCACAAACA 59.611 50.000 22.30 0.00 0.00 2.83
4876 11012 1.001181 GGATGCTGCAACCACAAACAT 59.999 47.619 22.30 0.00 0.00 2.71
4877 11013 2.063266 GATGCTGCAACCACAAACATG 58.937 47.619 6.36 0.00 0.00 3.21
4878 11014 0.822811 TGCTGCAACCACAAACATGT 59.177 45.000 0.00 0.00 0.00 3.21
4879 11015 1.206610 TGCTGCAACCACAAACATGTT 59.793 42.857 4.92 4.92 0.00 2.71
4880 11016 2.278854 GCTGCAACCACAAACATGTTT 58.721 42.857 18.13 18.13 0.00 2.83
4881 11017 2.677337 GCTGCAACCACAAACATGTTTT 59.323 40.909 21.10 10.12 0.00 2.43
4882 11018 3.242381 GCTGCAACCACAAACATGTTTTC 60.242 43.478 21.10 5.62 0.00 2.29
4883 11019 4.183101 CTGCAACCACAAACATGTTTTCT 58.817 39.130 21.10 6.76 0.00 2.52
4884 11020 3.931468 TGCAACCACAAACATGTTTTCTG 59.069 39.130 21.10 17.41 0.00 3.02
4885 11021 3.242381 GCAACCACAAACATGTTTTCTGC 60.242 43.478 21.10 18.64 0.00 4.26
4886 11022 3.883830 ACCACAAACATGTTTTCTGCA 57.116 38.095 21.10 0.00 0.00 4.41
4887 11023 4.199432 ACCACAAACATGTTTTCTGCAA 57.801 36.364 21.10 0.00 0.00 4.08
4888 11024 4.768583 ACCACAAACATGTTTTCTGCAAT 58.231 34.783 21.10 5.61 0.00 3.56
4889 11025 5.184711 ACCACAAACATGTTTTCTGCAATT 58.815 33.333 21.10 0.00 0.00 2.32
4890 11026 5.064962 ACCACAAACATGTTTTCTGCAATTG 59.935 36.000 21.10 10.00 0.00 2.32
4891 11027 4.965158 CACAAACATGTTTTCTGCAATTGC 59.035 37.500 23.69 23.69 42.50 3.56
4892 11028 4.877251 ACAAACATGTTTTCTGCAATTGCT 59.123 33.333 29.37 5.34 42.66 3.91
4893 11029 6.018913 CACAAACATGTTTTCTGCAATTGCTA 60.019 34.615 29.37 15.92 42.66 3.49
4894 11030 6.018832 ACAAACATGTTTTCTGCAATTGCTAC 60.019 34.615 29.37 18.58 42.66 3.58
4895 11031 4.559153 ACATGTTTTCTGCAATTGCTACC 58.441 39.130 29.37 12.63 42.66 3.18
4896 11032 3.281341 TGTTTTCTGCAATTGCTACCG 57.719 42.857 29.37 15.60 42.66 4.02
4897 11033 2.881513 TGTTTTCTGCAATTGCTACCGA 59.118 40.909 29.37 17.42 42.66 4.69
4898 11034 3.316588 TGTTTTCTGCAATTGCTACCGAA 59.683 39.130 29.37 21.38 42.66 4.30
4899 11035 4.202060 TGTTTTCTGCAATTGCTACCGAAA 60.202 37.500 29.37 24.81 42.66 3.46
4900 11036 3.552604 TTCTGCAATTGCTACCGAAAC 57.447 42.857 29.37 0.00 42.66 2.78
4901 11037 2.499197 TCTGCAATTGCTACCGAAACA 58.501 42.857 29.37 6.56 42.66 2.83
4902 11038 2.483877 TCTGCAATTGCTACCGAAACAG 59.516 45.455 29.37 15.68 42.66 3.16
4903 11039 2.483877 CTGCAATTGCTACCGAAACAGA 59.516 45.455 29.37 5.31 42.66 3.41
4904 11040 2.483877 TGCAATTGCTACCGAAACAGAG 59.516 45.455 29.37 0.00 42.66 3.35
4905 11041 2.729156 GCAATTGCTACCGAAACAGAGC 60.729 50.000 23.21 0.00 38.21 4.09
4906 11042 2.472695 ATTGCTACCGAAACAGAGCA 57.527 45.000 0.00 0.00 42.98 4.26
4907 11043 3.999821 TGCTACCGAAACAGAGCAA 57.000 47.368 0.00 0.00 41.78 3.91
4908 11044 1.508632 TGCTACCGAAACAGAGCAAC 58.491 50.000 0.00 0.00 41.78 4.17
4909 11045 1.070134 TGCTACCGAAACAGAGCAACT 59.930 47.619 0.00 0.00 41.78 3.16
4910 11046 4.596269 TTGCTACCGAAACAGAGCAACTG 61.596 47.826 4.13 8.93 46.95 3.16
4911 11047 6.771376 TTGCTACCGAAACAGAGCAACTGA 62.771 45.833 15.85 0.00 46.95 3.41
4920 11056 2.057137 AGAGCAACTGAAGCAAACCA 57.943 45.000 0.00 0.00 0.00 3.67
4921 11057 2.590821 AGAGCAACTGAAGCAAACCAT 58.409 42.857 0.00 0.00 0.00 3.55
4922 11058 2.555757 AGAGCAACTGAAGCAAACCATC 59.444 45.455 0.00 0.00 0.00 3.51
4923 11059 1.267806 AGCAACTGAAGCAAACCATCG 59.732 47.619 0.00 0.00 0.00 3.84
4924 11060 1.001378 GCAACTGAAGCAAACCATCGT 60.001 47.619 0.00 0.00 0.00 3.73
4925 11061 2.225491 GCAACTGAAGCAAACCATCGTA 59.775 45.455 0.00 0.00 0.00 3.43
4926 11062 3.119849 GCAACTGAAGCAAACCATCGTAT 60.120 43.478 0.00 0.00 0.00 3.06
4927 11063 4.406069 CAACTGAAGCAAACCATCGTATG 58.594 43.478 0.00 0.00 0.00 2.39
4928 11064 3.674997 ACTGAAGCAAACCATCGTATGT 58.325 40.909 0.00 0.00 0.00 2.29
4929 11065 4.827692 ACTGAAGCAAACCATCGTATGTA 58.172 39.130 0.00 0.00 0.00 2.29
4930 11066 4.630069 ACTGAAGCAAACCATCGTATGTAC 59.370 41.667 0.00 0.00 0.00 2.90
4931 11067 4.827692 TGAAGCAAACCATCGTATGTACT 58.172 39.130 0.00 0.00 0.00 2.73
4932 11068 5.968254 TGAAGCAAACCATCGTATGTACTA 58.032 37.500 0.00 0.00 0.00 1.82
4933 11069 5.808540 TGAAGCAAACCATCGTATGTACTAC 59.191 40.000 0.00 0.00 0.00 2.73
4949 11085 6.824305 TGTACTACGAATAATAGGTAGCCC 57.176 41.667 0.00 0.00 37.70 5.19
4950 11086 6.546484 TGTACTACGAATAATAGGTAGCCCT 58.454 40.000 0.00 0.00 45.51 5.19
4952 11088 7.607991 TGTACTACGAATAATAGGTAGCCCTAC 59.392 40.741 0.00 0.00 46.14 3.18
4960 11096 3.655358 GTAGCCCTACCCCATGCA 58.345 61.111 0.00 0.00 0.00 3.96
4961 11097 1.451936 GTAGCCCTACCCCATGCAG 59.548 63.158 0.00 0.00 0.00 4.41
4962 11098 1.054406 GTAGCCCTACCCCATGCAGA 61.054 60.000 0.00 0.00 0.00 4.26
4963 11099 0.764369 TAGCCCTACCCCATGCAGAG 60.764 60.000 0.00 0.00 0.00 3.35
4964 11100 2.378634 GCCCTACCCCATGCAGAGT 61.379 63.158 0.00 0.00 0.00 3.24
4965 11101 1.926426 GCCCTACCCCATGCAGAGTT 61.926 60.000 0.00 0.00 0.00 3.01
4966 11102 0.625849 CCCTACCCCATGCAGAGTTT 59.374 55.000 0.00 0.00 0.00 2.66
4967 11103 1.683011 CCCTACCCCATGCAGAGTTTG 60.683 57.143 0.00 0.00 0.00 2.93
4968 11104 1.004745 CCTACCCCATGCAGAGTTTGT 59.995 52.381 0.00 0.00 0.00 2.83
4969 11105 2.086869 CTACCCCATGCAGAGTTTGTG 58.913 52.381 0.00 0.00 0.00 3.33
4970 11106 0.478072 ACCCCATGCAGAGTTTGTGA 59.522 50.000 0.00 0.00 0.00 3.58
4971 11107 1.171308 CCCCATGCAGAGTTTGTGAG 58.829 55.000 0.00 0.00 0.00 3.51
4972 11108 0.524862 CCCATGCAGAGTTTGTGAGC 59.475 55.000 0.00 0.00 0.00 4.26
4973 11109 0.524862 CCATGCAGAGTTTGTGAGCC 59.475 55.000 0.00 0.00 0.00 4.70
4974 11110 0.167470 CATGCAGAGTTTGTGAGCCG 59.833 55.000 0.00 0.00 0.00 5.52
4975 11111 0.250467 ATGCAGAGTTTGTGAGCCGT 60.250 50.000 0.00 0.00 0.00 5.68
4976 11112 1.159713 TGCAGAGTTTGTGAGCCGTG 61.160 55.000 0.00 0.00 0.00 4.94
4977 11113 1.160329 GCAGAGTTTGTGAGCCGTGT 61.160 55.000 0.00 0.00 0.00 4.49
4978 11114 1.872237 GCAGAGTTTGTGAGCCGTGTA 60.872 52.381 0.00 0.00 0.00 2.90
4979 11115 2.479837 CAGAGTTTGTGAGCCGTGTAA 58.520 47.619 0.00 0.00 0.00 2.41
4980 11116 3.067106 CAGAGTTTGTGAGCCGTGTAAT 58.933 45.455 0.00 0.00 0.00 1.89
4981 11117 4.242475 CAGAGTTTGTGAGCCGTGTAATA 58.758 43.478 0.00 0.00 0.00 0.98
4982 11118 4.327357 CAGAGTTTGTGAGCCGTGTAATAG 59.673 45.833 0.00 0.00 0.00 1.73
4983 11119 3.596214 AGTTTGTGAGCCGTGTAATAGG 58.404 45.455 0.00 0.00 0.00 2.57
4988 11124 4.023173 GCCGTGTAATAGGCGACC 57.977 61.111 0.00 0.00 44.22 4.79
4989 11125 1.142314 GCCGTGTAATAGGCGACCA 59.858 57.895 0.00 0.00 44.22 4.02
4990 11126 0.249741 GCCGTGTAATAGGCGACCAT 60.250 55.000 0.00 0.00 44.22 3.55
4991 11127 1.808891 GCCGTGTAATAGGCGACCATT 60.809 52.381 0.00 0.00 44.22 3.16
4992 11128 2.557317 CCGTGTAATAGGCGACCATTT 58.443 47.619 0.00 0.00 0.00 2.32
4993 11129 2.286833 CCGTGTAATAGGCGACCATTTG 59.713 50.000 0.00 0.00 0.00 2.32
4994 11130 2.286184 CGTGTAATAGGCGACCATTTGC 60.286 50.000 0.00 0.00 0.00 3.68
4995 11131 1.937223 TGTAATAGGCGACCATTTGCG 59.063 47.619 0.00 0.00 32.01 4.85
5000 11136 2.100216 GCGACCATTTGCGCGATT 59.900 55.556 12.10 0.00 43.96 3.34
5001 11137 1.514014 GCGACCATTTGCGCGATTT 60.514 52.632 12.10 0.00 43.96 2.17
5002 11138 1.732474 GCGACCATTTGCGCGATTTG 61.732 55.000 12.10 1.74 43.96 2.32
5003 11139 0.454285 CGACCATTTGCGCGATTTGT 60.454 50.000 12.10 0.00 0.00 2.83
5004 11140 0.984109 GACCATTTGCGCGATTTGTG 59.016 50.000 12.10 0.58 0.00 3.33
5005 11141 0.595588 ACCATTTGCGCGATTTGTGA 59.404 45.000 12.10 0.00 0.00 3.58
5006 11142 1.261989 CCATTTGCGCGATTTGTGAG 58.738 50.000 12.10 0.00 0.00 3.51
5007 11143 1.261989 CATTTGCGCGATTTGTGAGG 58.738 50.000 12.10 0.00 0.00 3.86
5008 11144 0.456653 ATTTGCGCGATTTGTGAGGC 60.457 50.000 12.10 0.00 0.00 4.70
5009 11145 1.790090 TTTGCGCGATTTGTGAGGCA 61.790 50.000 12.10 0.00 0.00 4.75
5010 11146 2.202349 GCGCGATTTGTGAGGCAC 60.202 61.111 12.10 0.00 34.56 5.01
5012 11148 1.868997 CGCGATTTGTGAGGCACTT 59.131 52.632 0.00 0.00 41.55 3.16
5013 11149 0.453282 CGCGATTTGTGAGGCACTTG 60.453 55.000 0.00 0.00 41.55 3.16
5014 11150 0.874390 GCGATTTGTGAGGCACTTGA 59.126 50.000 0.00 0.00 41.55 3.02
5015 11151 1.266718 GCGATTTGTGAGGCACTTGAA 59.733 47.619 0.00 0.00 41.55 2.69
5016 11152 2.095059 GCGATTTGTGAGGCACTTGAAT 60.095 45.455 0.00 0.00 41.55 2.57
5017 11153 3.126858 GCGATTTGTGAGGCACTTGAATA 59.873 43.478 0.00 0.00 41.55 1.75
5018 11154 4.379394 GCGATTTGTGAGGCACTTGAATAA 60.379 41.667 0.00 0.00 41.55 1.40
5019 11155 5.327091 CGATTTGTGAGGCACTTGAATAAG 58.673 41.667 0.00 0.00 41.55 1.73
5020 11156 4.503741 TTTGTGAGGCACTTGAATAAGC 57.496 40.909 0.00 0.00 41.55 3.09
5024 11160 2.179764 GGCACTTGAATAAGCCGCA 58.820 52.632 0.00 0.00 37.36 5.69
5025 11161 0.740737 GGCACTTGAATAAGCCGCAT 59.259 50.000 0.00 0.00 37.36 4.73
5026 11162 1.534595 GGCACTTGAATAAGCCGCATG 60.535 52.381 0.00 0.00 37.36 4.06
5027 11163 1.831343 CACTTGAATAAGCCGCATGC 58.169 50.000 7.91 7.91 37.43 4.06
5028 11164 1.132834 CACTTGAATAAGCCGCATGCA 59.867 47.619 19.57 0.00 44.83 3.96
5029 11165 1.133025 ACTTGAATAAGCCGCATGCAC 59.867 47.619 19.57 9.19 44.83 4.57
5030 11166 0.455410 TTGAATAAGCCGCATGCACC 59.545 50.000 19.57 7.52 44.83 5.01
5031 11167 0.394216 TGAATAAGCCGCATGCACCT 60.394 50.000 19.57 9.95 44.83 4.00
5032 11168 1.134250 TGAATAAGCCGCATGCACCTA 60.134 47.619 19.57 3.45 44.83 3.08
5033 11169 2.154462 GAATAAGCCGCATGCACCTAT 58.846 47.619 19.57 5.79 44.83 2.57
5034 11170 2.276732 ATAAGCCGCATGCACCTATT 57.723 45.000 19.57 7.14 44.83 1.73
5035 11171 2.051334 TAAGCCGCATGCACCTATTT 57.949 45.000 19.57 5.41 44.83 1.40
5036 11172 1.185315 AAGCCGCATGCACCTATTTT 58.815 45.000 19.57 0.00 44.83 1.82
5037 11173 2.051334 AGCCGCATGCACCTATTTTA 57.949 45.000 19.57 0.00 44.83 1.52
5038 11174 2.586425 AGCCGCATGCACCTATTTTAT 58.414 42.857 19.57 0.00 44.83 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 9.255029 ACTTGCTTATTATTACATTGGGTTTCT 57.745 29.630 0.00 0.00 0.00 2.52
10 11 9.469097 TGTTACTTGCTTATTATTACATTGGGT 57.531 29.630 0.00 0.00 0.00 4.51
19 20 7.817478 GCCACCTTTTGTTACTTGCTTATTATT 59.183 33.333 0.00 0.00 0.00 1.40
20 21 7.320399 GCCACCTTTTGTTACTTGCTTATTAT 58.680 34.615 0.00 0.00 0.00 1.28
23 24 4.320935 CGCCACCTTTTGTTACTTGCTTAT 60.321 41.667 0.00 0.00 0.00 1.73
25 26 2.223711 CGCCACCTTTTGTTACTTGCTT 60.224 45.455 0.00 0.00 0.00 3.91
26 27 1.336755 CGCCACCTTTTGTTACTTGCT 59.663 47.619 0.00 0.00 0.00 3.91
27 28 1.766069 CGCCACCTTTTGTTACTTGC 58.234 50.000 0.00 0.00 0.00 4.01
29 30 0.309612 CGCGCCACCTTTTGTTACTT 59.690 50.000 0.00 0.00 0.00 2.24
31 32 1.728074 GCGCGCCACCTTTTGTTAC 60.728 57.895 23.24 0.00 0.00 2.50
32 33 1.894756 AGCGCGCCACCTTTTGTTA 60.895 52.632 30.33 0.00 0.00 2.41
33 34 3.216292 AGCGCGCCACCTTTTGTT 61.216 55.556 30.33 0.79 0.00 2.83
34 35 3.964875 CAGCGCGCCACCTTTTGT 61.965 61.111 30.33 1.73 0.00 2.83
35 36 4.705519 CCAGCGCGCCACCTTTTG 62.706 66.667 30.33 17.57 0.00 2.44
53 54 4.189188 ACGCGCGTGTAGGCCTAG 62.189 66.667 37.37 2.44 0.00 3.02
54 55 4.485834 CACGCGCGTGTAGGCCTA 62.486 66.667 45.19 8.91 40.91 3.93
68 69 4.368808 CCGAACGCTTGTGGCACG 62.369 66.667 13.77 3.14 41.91 5.34
69 70 4.025401 CCCGAACGCTTGTGGCAC 62.025 66.667 11.55 11.55 41.91 5.01
71 72 3.249973 GAACCCGAACGCTTGTGGC 62.250 63.158 0.00 0.00 37.64 5.01
72 73 2.943653 GAACCCGAACGCTTGTGG 59.056 61.111 0.00 0.00 0.00 4.17
73 74 1.952133 TCGAACCCGAACGCTTGTG 60.952 57.895 0.00 0.00 42.51 3.33
84 85 1.630148 CGTCTGTCAGATTCGAACCC 58.370 55.000 5.68 0.00 0.00 4.11
85 86 0.992802 GCGTCTGTCAGATTCGAACC 59.007 55.000 15.02 0.00 0.00 3.62
86 87 0.992802 GGCGTCTGTCAGATTCGAAC 59.007 55.000 15.02 5.11 0.00 3.95
87 88 0.601057 TGGCGTCTGTCAGATTCGAA 59.399 50.000 15.02 0.00 0.00 3.71
89 90 0.109086 AGTGGCGTCTGTCAGATTCG 60.109 55.000 5.68 7.14 0.00 3.34
90 91 1.337260 ACAGTGGCGTCTGTCAGATTC 60.337 52.381 5.68 0.97 44.07 2.52
91 92 0.681733 ACAGTGGCGTCTGTCAGATT 59.318 50.000 5.68 0.00 44.07 2.40
94 95 0.388649 GGTACAGTGGCGTCTGTCAG 60.389 60.000 16.19 0.00 45.79 3.51
95 96 1.110518 TGGTACAGTGGCGTCTGTCA 61.111 55.000 16.19 8.55 45.79 3.58
98 99 1.808411 AATTGGTACAGTGGCGTCTG 58.192 50.000 7.74 7.74 42.39 3.51
99 100 2.151202 CAAATTGGTACAGTGGCGTCT 58.849 47.619 0.00 0.00 42.39 4.18
100 101 1.877443 ACAAATTGGTACAGTGGCGTC 59.123 47.619 0.00 0.00 42.39 5.19
101 102 1.877443 GACAAATTGGTACAGTGGCGT 59.123 47.619 0.00 0.00 42.39 5.68
103 104 2.030274 GGTGACAAATTGGTACAGTGGC 60.030 50.000 0.00 0.00 42.39 5.01
104 105 2.556622 GGGTGACAAATTGGTACAGTGG 59.443 50.000 0.00 0.00 42.39 4.00
105 106 3.486383 AGGGTGACAAATTGGTACAGTG 58.514 45.455 0.00 0.00 42.39 3.66
106 107 3.876309 AGGGTGACAAATTGGTACAGT 57.124 42.857 0.00 0.00 42.39 3.55
107 108 3.689649 GCTAGGGTGACAAATTGGTACAG 59.310 47.826 0.00 0.00 42.39 2.74
108 109 3.560453 GGCTAGGGTGACAAATTGGTACA 60.560 47.826 0.00 0.00 0.00 2.90
109 110 3.014623 GGCTAGGGTGACAAATTGGTAC 58.985 50.000 0.00 0.00 0.00 3.34
110 111 2.916934 AGGCTAGGGTGACAAATTGGTA 59.083 45.455 0.00 0.00 0.00 3.25
112 113 2.290896 TGAGGCTAGGGTGACAAATTGG 60.291 50.000 0.00 0.00 0.00 3.16
113 114 3.071874 TGAGGCTAGGGTGACAAATTG 57.928 47.619 0.00 0.00 0.00 2.32
114 115 3.806949 TTGAGGCTAGGGTGACAAATT 57.193 42.857 0.00 0.00 0.00 1.82
117 118 2.375174 ACAATTGAGGCTAGGGTGACAA 59.625 45.455 13.59 0.00 0.00 3.18
119 120 2.359900 CACAATTGAGGCTAGGGTGAC 58.640 52.381 13.59 0.00 0.00 3.67
120 121 1.281867 CCACAATTGAGGCTAGGGTGA 59.718 52.381 13.59 0.00 0.00 4.02
121 122 1.004745 ACCACAATTGAGGCTAGGGTG 59.995 52.381 20.41 1.21 0.00 4.61
122 123 1.372501 ACCACAATTGAGGCTAGGGT 58.627 50.000 20.41 8.84 0.00 4.34
123 124 3.136443 TGATACCACAATTGAGGCTAGGG 59.864 47.826 20.41 8.29 0.00 3.53
124 125 4.422073 TGATACCACAATTGAGGCTAGG 57.578 45.455 20.41 10.11 0.00 3.02
128 129 4.702131 AGAAGTTGATACCACAATTGAGGC 59.298 41.667 20.41 6.47 32.36 4.70
129 130 6.615088 CAAGAAGTTGATACCACAATTGAGG 58.385 40.000 19.10 19.10 35.46 3.86
131 132 5.534278 TGCAAGAAGTTGATACCACAATTGA 59.466 36.000 13.59 0.00 35.46 2.57
132 133 5.771469 TGCAAGAAGTTGATACCACAATTG 58.229 37.500 3.24 3.24 35.46 2.32
133 134 6.403866 TTGCAAGAAGTTGATACCACAATT 57.596 33.333 0.00 0.00 35.46 2.32
134 135 5.047802 CCTTGCAAGAAGTTGATACCACAAT 60.048 40.000 28.05 0.00 35.46 2.71
135 136 4.278170 CCTTGCAAGAAGTTGATACCACAA 59.722 41.667 28.05 0.00 35.46 3.33
136 137 3.820467 CCTTGCAAGAAGTTGATACCACA 59.180 43.478 28.05 0.00 35.46 4.17
137 138 3.366374 GCCTTGCAAGAAGTTGATACCAC 60.366 47.826 28.05 0.00 35.46 4.16
139 140 2.819608 TGCCTTGCAAGAAGTTGATACC 59.180 45.455 28.05 3.48 34.76 2.73
140 141 4.503741 TTGCCTTGCAAGAAGTTGATAC 57.496 40.909 28.05 5.87 43.99 2.24
152 153 3.238597 AGTTTTCCCTAATTGCCTTGCA 58.761 40.909 0.00 0.00 36.47 4.08
171 174 2.112190 GAAGATCGAGGGGAGGAAAGT 58.888 52.381 0.00 0.00 0.00 2.66
173 176 2.247699 TGAAGATCGAGGGGAGGAAA 57.752 50.000 0.00 0.00 0.00 3.13
198 201 1.678970 GAGGCAAATCCACGGGCTT 60.679 57.895 0.00 0.00 37.58 4.35
326 337 0.951558 GACAGGAAAAAGAAGCGCCA 59.048 50.000 2.29 0.00 0.00 5.69
337 348 0.685097 CCCGGAAGACTGACAGGAAA 59.315 55.000 0.73 0.00 0.00 3.13
341 352 1.216710 GAGCCCGGAAGACTGACAG 59.783 63.158 0.73 0.00 0.00 3.51
433 444 1.254954 AGAAACTCTAACCTCGCCGT 58.745 50.000 0.00 0.00 0.00 5.68
446 458 1.525619 GCTTACGCACGACAAGAAACT 59.474 47.619 11.43 0.00 35.78 2.66
483 495 5.521906 TGAATCGATCTGAAGAACCTAGG 57.478 43.478 7.41 7.41 0.00 3.02
484 496 5.982516 CCTTGAATCGATCTGAAGAACCTAG 59.017 44.000 0.00 0.00 0.00 3.02
542 554 3.006728 CGGTGCCCCTAAGGACCA 61.007 66.667 3.10 0.00 38.24 4.02
557 569 2.807895 CTTCGTACACGTGCCCGG 60.808 66.667 22.26 0.00 40.80 5.73
568 580 1.952296 GATAGCCGGGAAGTCTTCGTA 59.048 52.381 2.18 0.00 0.00 3.43
767 779 4.011023 CGGGACATGTTGGTACCATAAAA 58.989 43.478 17.17 0.00 42.32 1.52
768 780 3.611970 CGGGACATGTTGGTACCATAAA 58.388 45.455 17.17 4.70 42.32 1.40
769 781 2.681390 GCGGGACATGTTGGTACCATAA 60.681 50.000 17.17 7.51 42.32 1.90
770 782 1.134340 GCGGGACATGTTGGTACCATA 60.134 52.381 17.17 8.71 42.32 2.74
774 786 2.104253 CGGCGGGACATGTTGGTAC 61.104 63.158 0.00 0.00 0.00 3.34
775 787 2.114488 AACGGCGGGACATGTTGGTA 62.114 55.000 13.24 0.00 0.00 3.25
776 788 2.114488 TAACGGCGGGACATGTTGGT 62.114 55.000 13.24 0.00 0.00 3.67
777 789 0.956410 TTAACGGCGGGACATGTTGG 60.956 55.000 13.24 0.00 0.00 3.77
778 790 0.875728 TTTAACGGCGGGACATGTTG 59.124 50.000 13.24 0.00 0.00 3.33
779 791 1.606903 TTTTAACGGCGGGACATGTT 58.393 45.000 13.24 0.00 0.00 2.71
780 792 1.741145 GATTTTAACGGCGGGACATGT 59.259 47.619 13.24 0.00 0.00 3.21
781 793 1.064952 GGATTTTAACGGCGGGACATG 59.935 52.381 13.24 0.00 0.00 3.21
782 794 1.385528 GGATTTTAACGGCGGGACAT 58.614 50.000 13.24 0.00 0.00 3.06
783 795 0.677414 GGGATTTTAACGGCGGGACA 60.677 55.000 13.24 0.00 0.00 4.02
784 796 0.393402 AGGGATTTTAACGGCGGGAC 60.393 55.000 13.24 0.00 0.00 4.46
785 797 0.107557 GAGGGATTTTAACGGCGGGA 60.108 55.000 13.24 0.00 0.00 5.14
786 798 1.433837 CGAGGGATTTTAACGGCGGG 61.434 60.000 13.24 0.00 0.00 6.13
787 799 0.460635 TCGAGGGATTTTAACGGCGG 60.461 55.000 13.24 0.00 0.00 6.13
789 801 0.656259 GCTCGAGGGATTTTAACGGC 59.344 55.000 15.58 0.00 0.00 5.68
791 803 0.300789 GCGCTCGAGGGATTTTAACG 59.699 55.000 31.36 15.27 0.00 3.18
793 805 0.808453 CCGCGCTCGAGGGATTTTAA 60.808 55.000 31.36 0.00 38.10 1.52
794 806 1.227147 CCGCGCTCGAGGGATTTTA 60.227 57.895 31.36 0.00 38.10 1.52
796 808 1.952102 TAACCGCGCTCGAGGGATTT 61.952 55.000 31.36 20.74 39.47 2.17
798 810 2.831742 TAACCGCGCTCGAGGGAT 60.832 61.111 31.36 13.23 39.47 3.85
799 811 2.874648 TACTAACCGCGCTCGAGGGA 62.875 60.000 31.36 10.42 39.47 4.20
800 812 2.475466 TACTAACCGCGCTCGAGGG 61.475 63.158 24.07 24.07 39.47 4.30
802 814 0.589229 CTGTACTAACCGCGCTCGAG 60.589 60.000 8.45 8.45 38.10 4.04
803 815 1.426621 CTGTACTAACCGCGCTCGA 59.573 57.895 5.56 0.00 38.10 4.04
804 816 1.585521 CCTGTACTAACCGCGCTCG 60.586 63.158 5.56 0.00 0.00 5.03
805 817 1.877165 GCCTGTACTAACCGCGCTC 60.877 63.158 5.56 0.00 0.00 5.03
806 818 2.183555 GCCTGTACTAACCGCGCT 59.816 61.111 5.56 0.00 0.00 5.92
808 820 0.525668 CTCTGCCTGTACTAACCGCG 60.526 60.000 0.00 0.00 0.00 6.46
809 821 0.179108 CCTCTGCCTGTACTAACCGC 60.179 60.000 0.00 0.00 0.00 5.68
810 822 1.471119 TCCTCTGCCTGTACTAACCG 58.529 55.000 0.00 0.00 0.00 4.44
811 823 3.068873 CAGATCCTCTGCCTGTACTAACC 59.931 52.174 0.00 0.00 37.72 2.85
812 824 4.314740 CAGATCCTCTGCCTGTACTAAC 57.685 50.000 0.00 0.00 37.72 2.34
823 835 1.370437 CGGGGATGCAGATCCTCTG 59.630 63.158 4.71 0.00 46.28 3.35
824 836 2.515071 GCGGGGATGCAGATCCTCT 61.515 63.158 4.71 0.00 46.28 3.69
825 837 2.031768 GCGGGGATGCAGATCCTC 59.968 66.667 6.32 1.06 46.88 3.71
826 838 3.564218 GGCGGGGATGCAGATCCT 61.564 66.667 6.32 0.00 46.88 3.24
827 839 4.996434 CGGCGGGGATGCAGATCC 62.996 72.222 0.00 0.00 46.99 3.36
828 840 3.245668 ATCGGCGGGGATGCAGATC 62.246 63.158 7.21 0.00 44.73 2.75
829 841 3.244580 ATCGGCGGGGATGCAGAT 61.245 61.111 7.21 0.00 43.47 2.90
830 842 3.928779 GATCGGCGGGGATGCAGA 61.929 66.667 7.21 0.00 43.05 4.26
831 843 3.873026 GAGATCGGCGGGGATGCAG 62.873 68.421 7.21 0.00 36.28 4.41
832 844 3.928779 GAGATCGGCGGGGATGCA 61.929 66.667 7.21 0.00 36.28 3.96
834 846 4.008933 GGGAGATCGGCGGGGATG 62.009 72.222 7.21 0.00 0.00 3.51
971 3921 1.371635 AATCGCGCGCTTTGCTTTT 60.372 47.368 30.48 8.69 43.27 2.27
977 3927 2.127270 CACACAATCGCGCGCTTT 60.127 55.556 30.48 19.45 0.00 3.51
1027 3985 0.529992 GCCCCAGAGAACGTTATCCG 60.530 60.000 18.76 9.20 44.03 4.18
1032 3990 2.030562 CACGCCCCAGAGAACGTT 59.969 61.111 0.00 0.00 36.45 3.99
1036 3994 4.020617 CTGCCACGCCCCAGAGAA 62.021 66.667 0.00 0.00 0.00 2.87
1131 4110 0.462047 CCATGTACACCTTCTCCGCC 60.462 60.000 0.00 0.00 0.00 6.13
1196 4175 3.702048 GCTCCCACCGGTACTGCA 61.702 66.667 6.87 0.00 0.00 4.41
1373 4353 1.268079 CAGTCTGTCAGAGAACAGCGA 59.732 52.381 1.75 0.00 45.12 4.93
1386 4366 1.134965 GGATACGCAAGCTCAGTCTGT 60.135 52.381 0.00 0.00 45.62 3.41
1527 4515 2.899303 AAGGTGATCGTTCCCCAATT 57.101 45.000 0.00 0.00 0.00 2.32
1566 4758 2.099921 TGCTCTTTGACCTCGATCTAGC 59.900 50.000 0.00 0.00 0.00 3.42
1576 4768 4.378874 GCACATTCTACTTGCTCTTTGACC 60.379 45.833 0.00 0.00 33.26 4.02
1643 4835 1.265568 CTCACGTACGGCATGTGTAC 58.734 55.000 21.06 16.02 43.53 2.90
1644 4836 0.883153 ACTCACGTACGGCATGTGTA 59.117 50.000 21.06 0.00 43.53 2.90
1645 4837 0.883153 TACTCACGTACGGCATGTGT 59.117 50.000 21.06 16.77 43.53 3.72
1647 4839 2.953466 ATTACTCACGTACGGCATGT 57.047 45.000 21.06 14.21 0.00 3.21
1648 4840 3.729217 CAGTATTACTCACGTACGGCATG 59.271 47.826 21.06 9.16 0.00 4.06
1649 4841 3.379372 ACAGTATTACTCACGTACGGCAT 59.621 43.478 21.06 4.54 0.00 4.40
1650 4842 2.749076 ACAGTATTACTCACGTACGGCA 59.251 45.455 21.06 4.11 0.00 5.69
1652 4844 5.725110 ACTACAGTATTACTCACGTACGG 57.275 43.478 21.06 8.79 0.00 4.02
1653 4845 8.065557 TCATACTACAGTATTACTCACGTACG 57.934 38.462 15.01 15.01 39.06 3.67
1656 4848 8.503458 ACTTCATACTACAGTATTACTCACGT 57.497 34.615 0.00 0.00 39.06 4.49
1657 4849 9.222916 CAACTTCATACTACAGTATTACTCACG 57.777 37.037 0.00 0.00 39.06 4.35
1725 5074 4.563976 GGTTTGATTACTGTCAATGCATGC 59.436 41.667 11.82 11.82 37.88 4.06
1899 5248 3.398920 CGTAGCCGTGCTTCATGG 58.601 61.111 3.71 0.82 42.95 3.66
2111 5498 1.364721 TTCGTCTCAGAGCTCGAGAG 58.635 55.000 27.38 26.07 40.12 3.20
2153 5541 8.766000 ACACACGATATACATTTTGTCAAGTA 57.234 30.769 0.00 0.00 0.00 2.24
2289 6024 1.080772 GCACTTTTACGGCCAAGCC 60.081 57.895 2.24 0.00 46.75 4.35
2989 9012 4.094830 TGATGCTCTAATGTGGCATGAT 57.905 40.909 0.00 0.00 45.14 2.45
3159 9187 3.389662 AAATTTGCCGGCCCGCAT 61.390 55.556 26.77 7.51 38.87 4.73
3175 9203 4.478203 TCCATCACCATTTTCCTGAACAA 58.522 39.130 0.00 0.00 0.00 2.83
3229 9257 7.192852 TGTACTAACGTCCCCCAAAATATAA 57.807 36.000 0.00 0.00 0.00 0.98
3370 9406 3.073062 AGGCAGTAGAACACAAAGGTCAT 59.927 43.478 0.00 0.00 35.97 3.06
3564 9600 8.898792 CATGTTAATATGCATCTTTCATTGTCG 58.101 33.333 0.19 0.00 0.00 4.35
3792 9832 4.348020 TGTGTACCTTTCTCCTATCCCT 57.652 45.455 0.00 0.00 0.00 4.20
3935 9976 7.986889 AGTAATGGTTATTCCCAAATGAAATGC 59.013 33.333 0.00 0.00 38.20 3.56
4047 10088 7.413438 GCATCGAAGACATGTTAAACTCAGAAT 60.413 37.037 0.00 0.00 42.51 2.40
4059 10100 4.067896 ACTTGAAAGCATCGAAGACATGT 58.932 39.130 0.00 0.00 42.51 3.21
4290 10383 3.385193 AATGGCGAACCTTGGAAAAAG 57.615 42.857 0.00 0.00 36.63 2.27
4567 10688 1.700955 GTCGGTGCTCCCTCCTATTA 58.299 55.000 0.00 0.00 0.00 0.98
4689 10824 7.502226 CCACAAGGCTCAGTAATATAATCCAAA 59.498 37.037 0.00 0.00 0.00 3.28
4716 10851 2.773487 TGTACCACCACATGTACTTGC 58.227 47.619 8.58 0.00 38.48 4.01
4718 10853 6.322712 ACAAATTTGTACCACCACATGTACTT 59.677 34.615 22.10 0.00 40.16 2.24
4728 10863 6.915843 CACTTGTCTTACAAATTTGTACCACC 59.084 38.462 26.72 16.34 42.84 4.61
4743 10878 7.179966 TCCAAGTCTATAGGTCACTTGTCTTA 58.820 38.462 21.97 9.38 43.71 2.10
4745 10880 5.580998 TCCAAGTCTATAGGTCACTTGTCT 58.419 41.667 21.97 0.00 43.71 3.41
4782 10918 6.380079 AGCCCCATTTATAGAATGGTAGAG 57.620 41.667 14.68 2.17 44.37 2.43
4784 10920 6.542821 TCAAGCCCCATTTATAGAATGGTAG 58.457 40.000 14.68 8.28 44.37 3.18
4787 10923 8.057623 AGATATCAAGCCCCATTTATAGAATGG 58.942 37.037 5.32 10.16 45.21 3.16
4792 10928 8.105829 AGTGAAGATATCAAGCCCCATTTATAG 58.894 37.037 5.32 0.00 40.50 1.31
4793 10929 7.988937 AGTGAAGATATCAAGCCCCATTTATA 58.011 34.615 5.32 0.00 40.50 0.98
4794 10930 6.856757 AGTGAAGATATCAAGCCCCATTTAT 58.143 36.000 5.32 0.00 40.50 1.40
4795 10931 6.266131 AGTGAAGATATCAAGCCCCATTTA 57.734 37.500 5.32 0.00 40.50 1.40
4796 10932 5.134725 AGTGAAGATATCAAGCCCCATTT 57.865 39.130 5.32 0.00 40.50 2.32
4797 10933 4.803329 AGTGAAGATATCAAGCCCCATT 57.197 40.909 5.32 0.00 40.50 3.16
4798 10934 4.166725 TGAAGTGAAGATATCAAGCCCCAT 59.833 41.667 5.32 0.00 40.50 4.00
4799 10935 3.523157 TGAAGTGAAGATATCAAGCCCCA 59.477 43.478 5.32 0.00 40.50 4.96
4800 10936 4.156455 TGAAGTGAAGATATCAAGCCCC 57.844 45.455 5.32 0.00 40.50 5.80
4801 10937 5.371526 TGATGAAGTGAAGATATCAAGCCC 58.628 41.667 5.32 0.00 40.50 5.19
4802 10938 6.709397 TCATGATGAAGTGAAGATATCAAGCC 59.291 38.462 5.32 0.00 40.50 4.35
4803 10939 7.725818 TCATGATGAAGTGAAGATATCAAGC 57.274 36.000 5.32 0.00 40.50 4.01
4811 10947 9.895138 TCTCATTTATTCATGATGAAGTGAAGA 57.105 29.630 13.79 8.38 40.05 2.87
4814 10950 9.676861 AGTTCTCATTTATTCATGATGAAGTGA 57.323 29.630 13.79 12.62 40.05 3.41
4818 10954 9.617523 TGCTAGTTCTCATTTATTCATGATGAA 57.382 29.630 10.65 10.65 41.09 2.57
4819 10955 9.049523 GTGCTAGTTCTCATTTATTCATGATGA 57.950 33.333 0.00 0.00 32.59 2.92
4820 10956 8.833493 TGTGCTAGTTCTCATTTATTCATGATG 58.167 33.333 0.00 0.00 32.59 3.07
4821 10957 8.834465 GTGTGCTAGTTCTCATTTATTCATGAT 58.166 33.333 0.00 0.00 32.59 2.45
4822 10958 7.823799 TGTGTGCTAGTTCTCATTTATTCATGA 59.176 33.333 0.00 0.00 0.00 3.07
4823 10959 7.977904 TGTGTGCTAGTTCTCATTTATTCATG 58.022 34.615 0.00 0.00 0.00 3.07
4824 10960 8.743085 ATGTGTGCTAGTTCTCATTTATTCAT 57.257 30.769 0.00 0.00 0.00 2.57
4825 10961 7.010460 CGATGTGTGCTAGTTCTCATTTATTCA 59.990 37.037 0.00 0.00 0.00 2.57
4826 10962 7.340699 CGATGTGTGCTAGTTCTCATTTATTC 58.659 38.462 0.00 0.00 0.00 1.75
4827 10963 6.238211 GCGATGTGTGCTAGTTCTCATTTATT 60.238 38.462 0.00 0.00 0.00 1.40
4828 10964 5.235186 GCGATGTGTGCTAGTTCTCATTTAT 59.765 40.000 0.00 0.00 0.00 1.40
4829 10965 4.566759 GCGATGTGTGCTAGTTCTCATTTA 59.433 41.667 0.00 0.00 0.00 1.40
4830 10966 3.372206 GCGATGTGTGCTAGTTCTCATTT 59.628 43.478 0.00 0.00 0.00 2.32
4831 10967 2.932614 GCGATGTGTGCTAGTTCTCATT 59.067 45.455 0.00 0.00 0.00 2.57
4832 10968 2.544685 GCGATGTGTGCTAGTTCTCAT 58.455 47.619 0.00 0.00 0.00 2.90
4833 10969 1.404181 GGCGATGTGTGCTAGTTCTCA 60.404 52.381 0.00 0.00 0.00 3.27
4834 10970 1.281899 GGCGATGTGTGCTAGTTCTC 58.718 55.000 0.00 0.00 0.00 2.87
4835 10971 0.608130 TGGCGATGTGTGCTAGTTCT 59.392 50.000 0.00 0.00 0.00 3.01
4836 10972 1.328680 CATGGCGATGTGTGCTAGTTC 59.671 52.381 0.00 0.00 0.00 3.01
4837 10973 1.372582 CATGGCGATGTGTGCTAGTT 58.627 50.000 0.00 0.00 0.00 2.24
4838 10974 0.462581 CCATGGCGATGTGTGCTAGT 60.463 55.000 7.98 0.00 0.00 2.57
4839 10975 0.179076 TCCATGGCGATGTGTGCTAG 60.179 55.000 6.96 0.00 0.00 3.42
4840 10976 0.469494 ATCCATGGCGATGTGTGCTA 59.531 50.000 6.96 0.00 0.00 3.49
4841 10977 1.099295 CATCCATGGCGATGTGTGCT 61.099 55.000 6.96 0.00 35.83 4.40
4842 10978 1.357690 CATCCATGGCGATGTGTGC 59.642 57.895 6.96 0.00 35.83 4.57
4843 10979 1.099295 AGCATCCATGGCGATGTGTG 61.099 55.000 6.96 7.02 41.49 3.82
4844 10980 1.099295 CAGCATCCATGGCGATGTGT 61.099 55.000 6.96 0.00 41.49 3.72
4845 10981 1.652563 CAGCATCCATGGCGATGTG 59.347 57.895 6.96 4.55 41.49 3.21
4846 10982 2.191513 GCAGCATCCATGGCGATGT 61.192 57.895 17.23 3.06 41.49 3.06
4847 10983 1.730451 TTGCAGCATCCATGGCGATG 61.730 55.000 6.96 10.86 42.20 3.84
4848 10984 1.454295 TTGCAGCATCCATGGCGAT 60.454 52.632 6.96 0.00 36.08 4.58
4849 10985 2.045143 TTGCAGCATCCATGGCGA 60.045 55.556 6.96 0.00 36.08 5.54
4850 10986 2.103538 GTTGCAGCATCCATGGCG 59.896 61.111 6.96 1.14 36.08 5.69
4851 10987 2.352821 TGGTTGCAGCATCCATGGC 61.353 57.895 19.68 0.00 29.44 4.40
4852 10988 1.252215 TGTGGTTGCAGCATCCATGG 61.252 55.000 25.01 4.97 35.94 3.66
4853 10989 0.604073 TTGTGGTTGCAGCATCCATG 59.396 50.000 25.01 0.00 35.94 3.66
4854 10990 1.001181 GTTTGTGGTTGCAGCATCCAT 59.999 47.619 25.01 0.00 35.94 3.41
4855 10991 0.388659 GTTTGTGGTTGCAGCATCCA 59.611 50.000 19.68 19.68 31.66 3.41
4856 10992 0.388659 TGTTTGTGGTTGCAGCATCC 59.611 50.000 14.85 14.85 0.00 3.51
4857 10993 2.063266 CATGTTTGTGGTTGCAGCATC 58.937 47.619 2.05 0.00 0.00 3.91
4858 10994 1.413445 ACATGTTTGTGGTTGCAGCAT 59.587 42.857 2.05 0.00 33.85 3.79
4859 10995 0.822811 ACATGTTTGTGGTTGCAGCA 59.177 45.000 2.05 0.00 33.85 4.41
4860 10996 1.938625 AACATGTTTGTGGTTGCAGC 58.061 45.000 4.92 0.00 35.83 5.25
4861 10997 4.033129 CAGAAAACATGTTTGTGGTTGCAG 59.967 41.667 23.93 4.24 35.83 4.41
4862 10998 3.931468 CAGAAAACATGTTTGTGGTTGCA 59.069 39.130 23.93 0.00 35.83 4.08
4863 10999 3.242381 GCAGAAAACATGTTTGTGGTTGC 60.242 43.478 23.93 21.52 35.83 4.17
4864 11000 3.931468 TGCAGAAAACATGTTTGTGGTTG 59.069 39.130 23.93 16.97 35.83 3.77
4865 11001 4.199432 TGCAGAAAACATGTTTGTGGTT 57.801 36.364 23.93 8.36 35.83 3.67
4866 11002 3.883830 TGCAGAAAACATGTTTGTGGT 57.116 38.095 23.93 8.75 35.83 4.16
4867 11003 5.503498 CAATTGCAGAAAACATGTTTGTGG 58.497 37.500 23.93 16.11 35.83 4.17
4868 11004 4.965158 GCAATTGCAGAAAACATGTTTGTG 59.035 37.500 25.36 22.54 41.59 3.33
4869 11005 4.877251 AGCAATTGCAGAAAACATGTTTGT 59.123 33.333 30.89 13.90 45.16 2.83
4870 11006 5.412526 AGCAATTGCAGAAAACATGTTTG 57.587 34.783 30.89 13.83 45.16 2.93
4871 11007 5.466393 GGTAGCAATTGCAGAAAACATGTTT 59.534 36.000 30.89 18.13 45.16 2.83
4872 11008 4.990426 GGTAGCAATTGCAGAAAACATGTT 59.010 37.500 30.89 4.92 45.16 2.71
4873 11009 4.559153 GGTAGCAATTGCAGAAAACATGT 58.441 39.130 30.89 9.74 45.16 3.21
4874 11010 3.609373 CGGTAGCAATTGCAGAAAACATG 59.391 43.478 30.89 12.84 45.16 3.21
4875 11011 3.505680 TCGGTAGCAATTGCAGAAAACAT 59.494 39.130 30.89 11.19 45.16 2.71
4876 11012 2.881513 TCGGTAGCAATTGCAGAAAACA 59.118 40.909 30.89 6.79 45.16 2.83
4877 11013 3.552604 TCGGTAGCAATTGCAGAAAAC 57.447 42.857 30.89 18.86 45.16 2.43
4878 11014 4.202060 TGTTTCGGTAGCAATTGCAGAAAA 60.202 37.500 30.89 19.07 45.16 2.29
4879 11015 3.316588 TGTTTCGGTAGCAATTGCAGAAA 59.683 39.130 30.89 27.41 45.16 2.52
4880 11016 2.881513 TGTTTCGGTAGCAATTGCAGAA 59.118 40.909 30.89 24.13 45.16 3.02
4881 11017 2.483877 CTGTTTCGGTAGCAATTGCAGA 59.516 45.455 30.89 20.34 45.16 4.26
4882 11018 2.483877 TCTGTTTCGGTAGCAATTGCAG 59.516 45.455 30.89 18.54 45.16 4.41
4883 11019 2.483877 CTCTGTTTCGGTAGCAATTGCA 59.516 45.455 30.89 14.94 45.16 4.08
4884 11020 2.729156 GCTCTGTTTCGGTAGCAATTGC 60.729 50.000 23.05 23.05 42.49 3.56
4885 11021 2.483877 TGCTCTGTTTCGGTAGCAATTG 59.516 45.455 0.00 0.00 41.74 2.32
4886 11022 2.778299 TGCTCTGTTTCGGTAGCAATT 58.222 42.857 0.00 0.00 41.74 2.32
4887 11023 2.472695 TGCTCTGTTTCGGTAGCAAT 57.527 45.000 0.00 0.00 41.74 3.56
4888 11024 3.999821 TGCTCTGTTTCGGTAGCAA 57.000 47.368 0.00 0.00 41.74 3.91
4889 11025 1.070134 AGTTGCTCTGTTTCGGTAGCA 59.930 47.619 0.00 0.00 42.91 3.49
4890 11026 1.461127 CAGTTGCTCTGTTTCGGTAGC 59.539 52.381 0.00 0.00 39.17 3.58
4891 11027 3.026630 TCAGTTGCTCTGTTTCGGTAG 57.973 47.619 8.75 0.00 43.97 3.18
4892 11028 3.390135 CTTCAGTTGCTCTGTTTCGGTA 58.610 45.455 8.75 0.00 43.97 4.02
4893 11029 2.213499 CTTCAGTTGCTCTGTTTCGGT 58.787 47.619 8.75 0.00 43.97 4.69
4894 11030 1.069636 GCTTCAGTTGCTCTGTTTCGG 60.070 52.381 8.75 0.00 43.97 4.30
4895 11031 1.599071 TGCTTCAGTTGCTCTGTTTCG 59.401 47.619 8.75 0.00 43.97 3.46
4896 11032 3.698029 TTGCTTCAGTTGCTCTGTTTC 57.302 42.857 8.75 2.09 43.97 2.78
4897 11033 3.429410 GGTTTGCTTCAGTTGCTCTGTTT 60.429 43.478 8.75 0.00 43.97 2.83
4898 11034 2.099756 GGTTTGCTTCAGTTGCTCTGTT 59.900 45.455 8.75 0.00 43.97 3.16
4899 11035 1.678101 GGTTTGCTTCAGTTGCTCTGT 59.322 47.619 8.75 0.00 43.97 3.41
4900 11036 1.677576 TGGTTTGCTTCAGTTGCTCTG 59.322 47.619 3.68 3.68 44.85 3.35
4901 11037 2.057137 TGGTTTGCTTCAGTTGCTCT 57.943 45.000 0.00 0.00 0.00 4.09
4902 11038 2.666619 CGATGGTTTGCTTCAGTTGCTC 60.667 50.000 0.00 0.00 0.00 4.26
4903 11039 1.267806 CGATGGTTTGCTTCAGTTGCT 59.732 47.619 0.00 0.00 0.00 3.91
4904 11040 1.001378 ACGATGGTTTGCTTCAGTTGC 60.001 47.619 0.00 0.00 0.00 4.17
4905 11041 4.083324 ACATACGATGGTTTGCTTCAGTTG 60.083 41.667 0.00 0.00 33.60 3.16
4906 11042 4.072131 ACATACGATGGTTTGCTTCAGTT 58.928 39.130 0.00 0.00 33.60 3.16
4907 11043 3.674997 ACATACGATGGTTTGCTTCAGT 58.325 40.909 0.00 0.00 33.60 3.41
4908 11044 4.870426 AGTACATACGATGGTTTGCTTCAG 59.130 41.667 0.00 0.00 33.60 3.02
4909 11045 4.827692 AGTACATACGATGGTTTGCTTCA 58.172 39.130 0.00 0.00 33.60 3.02
4910 11046 6.270096 GTAGTACATACGATGGTTTGCTTC 57.730 41.667 0.00 0.00 33.60 3.86
4923 11059 8.401709 GGGCTACCTATTATTCGTAGTACATAC 58.598 40.741 0.38 0.00 33.50 2.39
4924 11060 8.511604 GGGCTACCTATTATTCGTAGTACATA 57.488 38.462 0.38 0.00 33.50 2.29
4925 11061 7.401955 GGGCTACCTATTATTCGTAGTACAT 57.598 40.000 0.38 0.00 33.50 2.29
4926 11062 6.824305 GGGCTACCTATTATTCGTAGTACA 57.176 41.667 0.38 0.00 33.50 2.90
4943 11079 1.054406 TCTGCATGGGGTAGGGCTAC 61.054 60.000 0.00 0.00 35.40 3.58
4944 11080 0.764369 CTCTGCATGGGGTAGGGCTA 60.764 60.000 0.00 0.00 0.00 3.93
4945 11081 2.042762 TCTGCATGGGGTAGGGCT 59.957 61.111 0.00 0.00 0.00 5.19
4946 11082 1.926426 AACTCTGCATGGGGTAGGGC 61.926 60.000 0.00 0.00 32.00 5.19
4947 11083 0.625849 AAACTCTGCATGGGGTAGGG 59.374 55.000 0.00 0.00 35.53 3.53
4948 11084 1.004745 ACAAACTCTGCATGGGGTAGG 59.995 52.381 0.00 0.00 0.00 3.18
4949 11085 2.086869 CACAAACTCTGCATGGGGTAG 58.913 52.381 0.00 0.00 0.00 3.18
4950 11086 1.702401 TCACAAACTCTGCATGGGGTA 59.298 47.619 0.00 0.00 0.00 3.69
4951 11087 0.478072 TCACAAACTCTGCATGGGGT 59.522 50.000 0.00 0.00 0.00 4.95
4952 11088 1.171308 CTCACAAACTCTGCATGGGG 58.829 55.000 0.00 0.00 0.00 4.96
4953 11089 0.524862 GCTCACAAACTCTGCATGGG 59.475 55.000 0.00 0.00 0.00 4.00
4954 11090 0.524862 GGCTCACAAACTCTGCATGG 59.475 55.000 0.00 0.00 0.00 3.66
4955 11091 0.167470 CGGCTCACAAACTCTGCATG 59.833 55.000 0.00 0.00 0.00 4.06
4956 11092 0.250467 ACGGCTCACAAACTCTGCAT 60.250 50.000 0.00 0.00 0.00 3.96
4957 11093 1.146041 ACGGCTCACAAACTCTGCA 59.854 52.632 0.00 0.00 0.00 4.41
4958 11094 1.160329 ACACGGCTCACAAACTCTGC 61.160 55.000 0.00 0.00 0.00 4.26
4959 11095 2.148916 TACACGGCTCACAAACTCTG 57.851 50.000 0.00 0.00 0.00 3.35
4960 11096 2.902705 TTACACGGCTCACAAACTCT 57.097 45.000 0.00 0.00 0.00 3.24
4961 11097 3.617263 CCTATTACACGGCTCACAAACTC 59.383 47.826 0.00 0.00 0.00 3.01
4962 11098 3.596214 CCTATTACACGGCTCACAAACT 58.404 45.455 0.00 0.00 0.00 2.66
4963 11099 2.095372 GCCTATTACACGGCTCACAAAC 59.905 50.000 0.00 0.00 42.98 2.93
4964 11100 2.352388 GCCTATTACACGGCTCACAAA 58.648 47.619 0.00 0.00 42.98 2.83
4965 11101 1.737696 CGCCTATTACACGGCTCACAA 60.738 52.381 0.00 0.00 44.11 3.33
4966 11102 0.179121 CGCCTATTACACGGCTCACA 60.179 55.000 0.00 0.00 44.11 3.58
4967 11103 0.101759 TCGCCTATTACACGGCTCAC 59.898 55.000 0.00 0.00 44.11 3.51
4968 11104 0.101759 GTCGCCTATTACACGGCTCA 59.898 55.000 0.00 0.00 44.11 4.26
4969 11105 0.596859 GGTCGCCTATTACACGGCTC 60.597 60.000 0.00 0.00 44.11 4.70
4970 11106 1.324740 TGGTCGCCTATTACACGGCT 61.325 55.000 0.00 0.00 44.11 5.52
4971 11107 0.249741 ATGGTCGCCTATTACACGGC 60.250 55.000 0.00 0.00 42.86 5.68
4972 11108 2.234300 AATGGTCGCCTATTACACGG 57.766 50.000 0.00 0.00 0.00 4.94
4973 11109 2.286184 GCAAATGGTCGCCTATTACACG 60.286 50.000 0.00 0.00 0.00 4.49
4974 11110 2.286184 CGCAAATGGTCGCCTATTACAC 60.286 50.000 0.00 0.00 0.00 2.90
4975 11111 1.937223 CGCAAATGGTCGCCTATTACA 59.063 47.619 0.00 0.00 0.00 2.41
4976 11112 1.333791 GCGCAAATGGTCGCCTATTAC 60.334 52.381 0.30 0.00 45.01 1.89
4977 11113 0.941542 GCGCAAATGGTCGCCTATTA 59.058 50.000 0.30 0.00 45.01 0.98
4978 11114 1.727467 GCGCAAATGGTCGCCTATT 59.273 52.632 0.30 0.00 45.01 1.73
4979 11115 3.420943 GCGCAAATGGTCGCCTAT 58.579 55.556 0.30 0.00 45.01 2.57
4983 11119 1.514014 AAATCGCGCAAATGGTCGC 60.514 52.632 8.75 0.00 46.98 5.19
4984 11120 0.454285 ACAAATCGCGCAAATGGTCG 60.454 50.000 8.75 0.00 0.00 4.79
4985 11121 0.984109 CACAAATCGCGCAAATGGTC 59.016 50.000 8.75 0.00 0.00 4.02
4986 11122 0.595588 TCACAAATCGCGCAAATGGT 59.404 45.000 8.75 0.00 0.00 3.55
4987 11123 1.261989 CTCACAAATCGCGCAAATGG 58.738 50.000 8.75 0.00 0.00 3.16
4988 11124 1.261989 CCTCACAAATCGCGCAAATG 58.738 50.000 8.75 2.79 0.00 2.32
4989 11125 0.456653 GCCTCACAAATCGCGCAAAT 60.457 50.000 8.75 0.00 0.00 2.32
4990 11126 1.081509 GCCTCACAAATCGCGCAAA 60.082 52.632 8.75 0.00 0.00 3.68
4991 11127 2.257302 TGCCTCACAAATCGCGCAA 61.257 52.632 8.75 0.00 0.00 4.85
4992 11128 2.667874 TGCCTCACAAATCGCGCA 60.668 55.556 8.75 0.00 0.00 6.09
4993 11129 2.187599 AAGTGCCTCACAAATCGCGC 62.188 55.000 0.00 0.00 36.74 6.86
4994 11130 0.453282 CAAGTGCCTCACAAATCGCG 60.453 55.000 0.00 0.00 36.74 5.87
4995 11131 0.874390 TCAAGTGCCTCACAAATCGC 59.126 50.000 0.00 0.00 36.74 4.58
4996 11132 3.837213 ATTCAAGTGCCTCACAAATCG 57.163 42.857 0.00 0.00 36.74 3.34
4997 11133 5.098211 GCTTATTCAAGTGCCTCACAAATC 58.902 41.667 0.00 0.00 36.74 2.17
4998 11134 4.082026 GGCTTATTCAAGTGCCTCACAAAT 60.082 41.667 0.00 0.14 41.92 2.32
4999 11135 3.255642 GGCTTATTCAAGTGCCTCACAAA 59.744 43.478 0.00 0.00 41.92 2.83
5000 11136 2.819608 GGCTTATTCAAGTGCCTCACAA 59.180 45.455 0.00 0.00 41.92 3.33
5001 11137 2.436417 GGCTTATTCAAGTGCCTCACA 58.564 47.619 0.00 0.00 41.92 3.58
5002 11138 1.398390 CGGCTTATTCAAGTGCCTCAC 59.602 52.381 0.00 0.00 42.90 3.51
5003 11139 1.737838 CGGCTTATTCAAGTGCCTCA 58.262 50.000 0.00 0.00 42.90 3.86
5004 11140 0.378610 GCGGCTTATTCAAGTGCCTC 59.621 55.000 0.00 0.00 42.90 4.70
5005 11141 0.322456 TGCGGCTTATTCAAGTGCCT 60.322 50.000 0.00 0.00 42.90 4.75
5006 11142 0.740737 ATGCGGCTTATTCAAGTGCC 59.259 50.000 0.00 0.00 41.76 5.01
5007 11143 1.831343 CATGCGGCTTATTCAAGTGC 58.169 50.000 0.00 0.00 36.44 4.40
5008 11144 1.132834 TGCATGCGGCTTATTCAAGTG 59.867 47.619 14.09 0.00 45.15 3.16
5009 11145 1.133025 GTGCATGCGGCTTATTCAAGT 59.867 47.619 14.09 0.00 45.15 3.16
5010 11146 1.534595 GGTGCATGCGGCTTATTCAAG 60.535 52.381 14.09 0.00 45.15 3.02
5011 11147 0.455410 GGTGCATGCGGCTTATTCAA 59.545 50.000 14.09 0.00 45.15 2.69
5012 11148 0.394216 AGGTGCATGCGGCTTATTCA 60.394 50.000 14.09 0.00 45.15 2.57
5013 11149 1.593196 TAGGTGCATGCGGCTTATTC 58.407 50.000 14.09 0.00 45.15 1.75
5014 11150 2.276732 ATAGGTGCATGCGGCTTATT 57.723 45.000 14.09 0.00 45.15 1.40
5015 11151 2.276732 AATAGGTGCATGCGGCTTAT 57.723 45.000 14.09 11.45 45.15 1.73
5016 11152 2.051334 AAATAGGTGCATGCGGCTTA 57.949 45.000 14.09 9.59 45.15 3.09
5017 11153 1.185315 AAAATAGGTGCATGCGGCTT 58.815 45.000 14.09 7.55 45.15 4.35
5018 11154 2.051334 TAAAATAGGTGCATGCGGCT 57.949 45.000 14.09 1.89 45.15 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.