Multiple sequence alignment - TraesCS7D01G389100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G389100 | chr7D | 100.000 | 5352 | 0 | 0 | 1 | 5352 | 504255912 | 504250561 | 0.000000e+00 | 9884.0 |
1 | TraesCS7D01G389100 | chr7D | 80.000 | 1205 | 204 | 29 | 3124 | 4293 | 504546076 | 504544874 | 0.000000e+00 | 856.0 |
2 | TraesCS7D01G389100 | chr7D | 82.444 | 974 | 145 | 13 | 3342 | 4293 | 504521960 | 504520991 | 0.000000e+00 | 828.0 |
3 | TraesCS7D01G389100 | chr7D | 81.874 | 982 | 152 | 18 | 3342 | 4304 | 504536390 | 504535416 | 0.000000e+00 | 804.0 |
4 | TraesCS7D01G389100 | chr7D | 88.302 | 265 | 31 | 0 | 2133 | 2397 | 504537668 | 504537404 | 8.650000e-83 | 318.0 |
5 | TraesCS7D01G389100 | chr7D | 93.158 | 190 | 13 | 0 | 3119 | 3308 | 504522220 | 504522031 | 4.080000e-71 | 279.0 |
6 | TraesCS7D01G389100 | chr7D | 93.443 | 183 | 12 | 0 | 3124 | 3306 | 504536642 | 504536460 | 6.830000e-69 | 272.0 |
7 | TraesCS7D01G389100 | chr7D | 85.660 | 265 | 20 | 8 | 2133 | 2397 | 504523585 | 504523339 | 4.110000e-66 | 263.0 |
8 | TraesCS7D01G389100 | chr7D | 89.080 | 174 | 19 | 0 | 2133 | 2306 | 504762686 | 504762513 | 3.250000e-52 | 217.0 |
9 | TraesCS7D01G389100 | chr7D | 87.975 | 158 | 17 | 2 | 2447 | 2602 | 504522895 | 504522738 | 9.150000e-43 | 185.0 |
10 | TraesCS7D01G389100 | chr7A | 93.034 | 3388 | 161 | 34 | 2005 | 5352 | 571939309 | 571935957 | 0.000000e+00 | 4879.0 |
11 | TraesCS7D01G389100 | chr7A | 93.344 | 1202 | 40 | 12 | 419 | 1590 | 571941191 | 571940000 | 0.000000e+00 | 1740.0 |
12 | TraesCS7D01G389100 | chr7A | 81.874 | 982 | 152 | 19 | 3342 | 4304 | 572236563 | 572235589 | 0.000000e+00 | 804.0 |
13 | TraesCS7D01G389100 | chr7A | 81.920 | 979 | 144 | 22 | 3342 | 4293 | 572182191 | 572181219 | 0.000000e+00 | 797.0 |
14 | TraesCS7D01G389100 | chr7A | 94.982 | 279 | 10 | 2 | 1 | 279 | 571942250 | 571941976 | 8.230000e-118 | 435.0 |
15 | TraesCS7D01G389100 | chr7A | 90.189 | 265 | 26 | 0 | 2133 | 2397 | 572184713 | 572184449 | 3.970000e-91 | 346.0 |
16 | TraesCS7D01G389100 | chr7A | 87.547 | 265 | 33 | 0 | 2133 | 2397 | 572237844 | 572237580 | 1.870000e-79 | 307.0 |
17 | TraesCS7D01G389100 | chr7A | 92.896 | 183 | 13 | 0 | 3124 | 3306 | 572236815 | 572236633 | 3.180000e-67 | 267.0 |
18 | TraesCS7D01G389100 | chr7A | 92.222 | 180 | 14 | 0 | 3129 | 3308 | 572182441 | 572182262 | 6.880000e-64 | 255.0 |
19 | TraesCS7D01G389100 | chr7A | 95.122 | 123 | 4 | 1 | 270 | 390 | 571941565 | 571941443 | 5.470000e-45 | 193.0 |
20 | TraesCS7D01G389100 | chr7A | 90.210 | 143 | 10 | 2 | 2460 | 2602 | 572183106 | 572182968 | 3.290000e-42 | 183.0 |
21 | TraesCS7D01G389100 | chr7A | 97.260 | 73 | 2 | 0 | 128 | 200 | 249586538 | 249586466 | 2.020000e-24 | 124.0 |
22 | TraesCS7D01G389100 | chr7B | 93.758 | 2355 | 102 | 27 | 3013 | 5352 | 532290742 | 532288418 | 0.000000e+00 | 3493.0 |
23 | TraesCS7D01G389100 | chr7B | 93.599 | 828 | 23 | 6 | 487 | 1291 | 532294547 | 532293727 | 0.000000e+00 | 1208.0 |
24 | TraesCS7D01G389100 | chr7B | 92.497 | 733 | 24 | 8 | 2005 | 2707 | 532292124 | 532291393 | 0.000000e+00 | 1020.0 |
25 | TraesCS7D01G389100 | chr7B | 95.052 | 485 | 21 | 3 | 1 | 485 | 532295114 | 532294633 | 0.000000e+00 | 760.0 |
26 | TraesCS7D01G389100 | chr7B | 80.825 | 970 | 164 | 17 | 3343 | 4294 | 532462917 | 532461952 | 0.000000e+00 | 741.0 |
27 | TraesCS7D01G389100 | chr7B | 80.922 | 629 | 112 | 8 | 3666 | 4288 | 532469033 | 532468407 | 1.730000e-134 | 490.0 |
28 | TraesCS7D01G389100 | chr7B | 90.446 | 314 | 21 | 3 | 2704 | 3014 | 532291353 | 532291046 | 6.450000e-109 | 405.0 |
29 | TraesCS7D01G389100 | chr7B | 94.275 | 262 | 10 | 1 | 1334 | 1590 | 532293729 | 532293468 | 3.880000e-106 | 396.0 |
30 | TraesCS7D01G389100 | chr7B | 90.335 | 269 | 25 | 1 | 2130 | 2397 | 532483881 | 532483613 | 8.530000e-93 | 351.0 |
31 | TraesCS7D01G389100 | chr7B | 87.547 | 265 | 33 | 0 | 2133 | 2397 | 532464398 | 532464134 | 1.870000e-79 | 307.0 |
32 | TraesCS7D01G389100 | chr7B | 96.216 | 185 | 7 | 0 | 3124 | 3308 | 532482525 | 532482341 | 2.420000e-78 | 303.0 |
33 | TraesCS7D01G389100 | chr7B | 92.708 | 192 | 13 | 1 | 3118 | 3308 | 532463176 | 532462985 | 5.280000e-70 | 276.0 |
34 | TraesCS7D01G389100 | chr7B | 88.820 | 161 | 16 | 2 | 3342 | 3500 | 532482270 | 532482110 | 4.230000e-46 | 196.0 |
35 | TraesCS7D01G389100 | chr7B | 85.714 | 189 | 15 | 9 | 2420 | 2602 | 532482835 | 532482653 | 7.080000e-44 | 189.0 |
36 | TraesCS7D01G389100 | chr7B | 84.892 | 139 | 16 | 3 | 3537 | 3670 | 532481940 | 532481802 | 9.350000e-28 | 135.0 |
37 | TraesCS7D01G389100 | chr4A | 89.447 | 199 | 10 | 3 | 1590 | 1788 | 674557052 | 674557239 | 1.930000e-59 | 241.0 |
38 | TraesCS7D01G389100 | chrUn | 85.075 | 201 | 14 | 2 | 1589 | 1789 | 7876540 | 7876356 | 1.970000e-44 | 191.0 |
39 | TraesCS7D01G389100 | chrUn | 91.837 | 49 | 4 | 0 | 1237 | 1285 | 36508558 | 36508606 | 9.620000e-08 | 69.4 |
40 | TraesCS7D01G389100 | chr6D | 86.010 | 193 | 7 | 1 | 1595 | 1787 | 118812999 | 118813171 | 7.080000e-44 | 189.0 |
41 | TraesCS7D01G389100 | chr1D | 85.354 | 198 | 12 | 4 | 1589 | 1786 | 298951280 | 298951100 | 7.080000e-44 | 189.0 |
42 | TraesCS7D01G389100 | chr5B | 84.343 | 198 | 11 | 2 | 1590 | 1787 | 252228086 | 252228263 | 5.510000e-40 | 176.0 |
43 | TraesCS7D01G389100 | chr5B | 89.333 | 75 | 8 | 0 | 127 | 201 | 633157944 | 633158018 | 1.590000e-15 | 95.3 |
44 | TraesCS7D01G389100 | chr2B | 83.168 | 202 | 13 | 3 | 1590 | 1790 | 596102782 | 596102601 | 1.190000e-36 | 165.0 |
45 | TraesCS7D01G389100 | chr2B | 82.412 | 199 | 14 | 2 | 1590 | 1787 | 770767889 | 770767711 | 2.580000e-33 | 154.0 |
46 | TraesCS7D01G389100 | chr3B | 83.333 | 198 | 11 | 3 | 1590 | 1787 | 788207301 | 788207476 | 4.290000e-36 | 163.0 |
47 | TraesCS7D01G389100 | chr3B | 97.333 | 75 | 2 | 0 | 125 | 199 | 623655787 | 623655861 | 1.560000e-25 | 128.0 |
48 | TraesCS7D01G389100 | chr3B | 83.871 | 93 | 15 | 0 | 1468 | 1560 | 792858628 | 792858720 | 7.380000e-14 | 89.8 |
49 | TraesCS7D01G389100 | chr4D | 92.453 | 106 | 7 | 1 | 1590 | 1695 | 6548239 | 6548343 | 3.340000e-32 | 150.0 |
50 | TraesCS7D01G389100 | chr2A | 79.899 | 199 | 19 | 5 | 1590 | 1787 | 757957873 | 757957695 | 5.630000e-25 | 126.0 |
51 | TraesCS7D01G389100 | chr2A | 90.667 | 75 | 7 | 0 | 1713 | 1787 | 10978795 | 10978721 | 3.410000e-17 | 100.0 |
52 | TraesCS7D01G389100 | chr3D | 93.750 | 80 | 5 | 0 | 1708 | 1787 | 381633168 | 381633247 | 2.620000e-23 | 121.0 |
53 | TraesCS7D01G389100 | chr3D | 94.805 | 77 | 4 | 0 | 126 | 202 | 553872148 | 553872072 | 2.620000e-23 | 121.0 |
54 | TraesCS7D01G389100 | chr1B | 93.939 | 66 | 4 | 0 | 136 | 201 | 35471936 | 35472001 | 3.410000e-17 | 100.0 |
55 | TraesCS7D01G389100 | chr5D | 91.549 | 71 | 6 | 0 | 128 | 198 | 341009836 | 341009906 | 1.230000e-16 | 99.0 |
56 | TraesCS7D01G389100 | chr1A | 89.610 | 77 | 5 | 1 | 128 | 204 | 487185642 | 487185569 | 1.590000e-15 | 95.3 |
57 | TraesCS7D01G389100 | chr3A | 82.692 | 104 | 18 | 0 | 1468 | 1571 | 722275754 | 722275857 | 5.710000e-15 | 93.5 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G389100 | chr7D | 504250561 | 504255912 | 5351 | True | 9884.000000 | 9884 | 100.000000 | 1 | 5352 | 1 | chr7D.!!$R1 | 5351 |
1 | TraesCS7D01G389100 | chr7D | 504544874 | 504546076 | 1202 | True | 856.000000 | 856 | 80.000000 | 3124 | 4293 | 1 | chr7D.!!$R2 | 1169 |
2 | TraesCS7D01G389100 | chr7D | 504535416 | 504537668 | 2252 | True | 464.666667 | 804 | 87.873000 | 2133 | 4304 | 3 | chr7D.!!$R5 | 2171 |
3 | TraesCS7D01G389100 | chr7D | 504520991 | 504523585 | 2594 | True | 388.750000 | 828 | 87.309250 | 2133 | 4293 | 4 | chr7D.!!$R4 | 2160 |
4 | TraesCS7D01G389100 | chr7A | 571935957 | 571942250 | 6293 | True | 1811.750000 | 4879 | 94.120500 | 1 | 5352 | 4 | chr7A.!!$R2 | 5351 |
5 | TraesCS7D01G389100 | chr7A | 572235589 | 572237844 | 2255 | True | 459.333333 | 804 | 87.439000 | 2133 | 4304 | 3 | chr7A.!!$R4 | 2171 |
6 | TraesCS7D01G389100 | chr7A | 572181219 | 572184713 | 3494 | True | 395.250000 | 797 | 88.635250 | 2133 | 4293 | 4 | chr7A.!!$R3 | 2160 |
7 | TraesCS7D01G389100 | chr7B | 532288418 | 532295114 | 6696 | True | 1213.666667 | 3493 | 93.271167 | 1 | 5352 | 6 | chr7B.!!$R2 | 5351 |
8 | TraesCS7D01G389100 | chr7B | 532468407 | 532469033 | 626 | True | 490.000000 | 490 | 80.922000 | 3666 | 4288 | 1 | chr7B.!!$R1 | 622 |
9 | TraesCS7D01G389100 | chr7B | 532461952 | 532464398 | 2446 | True | 441.333333 | 741 | 87.026667 | 2133 | 4294 | 3 | chr7B.!!$R3 | 2161 |
10 | TraesCS7D01G389100 | chr7B | 532481802 | 532483881 | 2079 | True | 234.800000 | 351 | 89.195400 | 2130 | 3670 | 5 | chr7B.!!$R4 | 1540 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
334 | 755 | 0.653636 | GCGCCGAAATCGTTTATCCA | 59.346 | 50.0 | 0.00 | 0.0 | 37.74 | 3.41 | F |
1325 | 2113 | 0.530288 | AGAGGAAAGAGAGAGCACGC | 59.470 | 55.0 | 0.00 | 0.0 | 0.00 | 5.34 | F |
1328 | 2116 | 0.244994 | GGAAAGAGAGAGCACGCAGA | 59.755 | 55.0 | 0.00 | 0.0 | 0.00 | 4.26 | F |
2278 | 4266 | 0.318784 | ACGTCAAGGACTGCGACTTC | 60.319 | 55.0 | 0.00 | 0.0 | 0.00 | 3.01 | F |
2908 | 7208 | 0.455410 | TGCAGATAACCAATTGCGCC | 59.545 | 50.0 | 4.18 | 0.0 | 39.34 | 6.53 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1327 | 2115 | 0.029035 | ATCCGTACAGCGACGTGATC | 59.971 | 55.000 | 0.00 | 0.00 | 44.77 | 2.92 | R |
3225 | 7839 | 0.255318 | CATCCCTTGAGGCTTGCTCT | 59.745 | 55.000 | 0.00 | 0.00 | 34.51 | 4.09 | R |
3437 | 8093 | 1.976474 | GAACAGATTTGCGGGCCCA | 60.976 | 57.895 | 24.92 | 1.02 | 0.00 | 5.36 | R |
3926 | 8732 | 1.398390 | GGTCGCCTTTGTTCTATGCAG | 59.602 | 52.381 | 0.00 | 0.00 | 0.00 | 4.41 | R |
4917 | 9742 | 0.032130 | TGAGTGACGTGCTGGTCTTC | 59.968 | 55.000 | 0.00 | 7.27 | 37.81 | 2.87 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
119 | 120 | 2.564062 | CCACATTTGAAGCCCAGACATT | 59.436 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
204 | 205 | 2.680913 | CCAAAGCCAAGAGTCGCCG | 61.681 | 63.158 | 0.00 | 0.00 | 0.00 | 6.46 |
334 | 755 | 0.653636 | GCGCCGAAATCGTTTATCCA | 59.346 | 50.000 | 0.00 | 0.00 | 37.74 | 3.41 |
410 | 1066 | 3.947910 | AGACAAATTGAACCATGGCTG | 57.052 | 42.857 | 13.04 | 0.56 | 27.68 | 4.85 |
450 | 1109 | 4.202050 | GGTTTATTGACATGCACATCCTCC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
451 | 1110 | 4.508551 | TTATTGACATGCACATCCTCCT | 57.491 | 40.909 | 0.00 | 0.00 | 0.00 | 3.69 |
452 | 1111 | 2.408271 | TTGACATGCACATCCTCCTC | 57.592 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
485 | 1144 | 6.465781 | GTGTACAACAAATACAATCGCTCATG | 59.534 | 38.462 | 0.00 | 0.00 | 34.41 | 3.07 |
572 | 1315 | 9.208022 | CATATCACGTGAAATATCAACTGGTAT | 57.792 | 33.333 | 24.13 | 7.93 | 37.30 | 2.73 |
637 | 1386 | 7.682741 | GCCAAATCAGCTAATGAATAAAGAGCA | 60.683 | 37.037 | 0.00 | 0.00 | 42.53 | 4.26 |
810 | 1595 | 3.695816 | GCCATAAATCGAGCAAGGAAAC | 58.304 | 45.455 | 0.00 | 0.00 | 0.00 | 2.78 |
811 | 1596 | 3.128589 | GCCATAAATCGAGCAAGGAAACA | 59.871 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
885 | 1670 | 2.311688 | ATACCCTCGCCTTTGCTCCG | 62.312 | 60.000 | 0.00 | 0.00 | 34.43 | 4.63 |
1248 | 2036 | 2.375345 | CGCCTACCCCATGGTCCTT | 61.375 | 63.158 | 11.73 | 0.00 | 43.06 | 3.36 |
1325 | 2113 | 0.530288 | AGAGGAAAGAGAGAGCACGC | 59.470 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
1327 | 2115 | 0.246086 | AGGAAAGAGAGAGCACGCAG | 59.754 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
1328 | 2116 | 0.244994 | GGAAAGAGAGAGCACGCAGA | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1329 | 2117 | 1.134848 | GGAAAGAGAGAGCACGCAGAT | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
1586 | 2379 | 3.402628 | AGGTAAACCGCATAGGCATAG | 57.597 | 47.619 | 0.00 | 0.00 | 46.52 | 2.23 |
1587 | 2380 | 2.038557 | AGGTAAACCGCATAGGCATAGG | 59.961 | 50.000 | 0.00 | 0.00 | 46.52 | 2.57 |
1588 | 2381 | 1.804748 | GTAAACCGCATAGGCATAGGC | 59.195 | 52.381 | 4.72 | 4.72 | 46.52 | 3.93 |
1594 | 2387 | 2.743636 | GCATAGGCATAGGCGAGTAA | 57.256 | 50.000 | 0.00 | 0.00 | 42.47 | 2.24 |
1595 | 2388 | 2.338500 | GCATAGGCATAGGCGAGTAAC | 58.662 | 52.381 | 0.00 | 0.00 | 42.47 | 2.50 |
1596 | 2389 | 2.596452 | CATAGGCATAGGCGAGTAACG | 58.404 | 52.381 | 0.00 | 0.00 | 42.47 | 3.18 |
1617 | 2410 | 5.169688 | CGCTACACGTACAAAAGAGTTAC | 57.830 | 43.478 | 0.00 | 0.00 | 36.87 | 2.50 |
1618 | 2411 | 4.676471 | CGCTACACGTACAAAAGAGTTACA | 59.324 | 41.667 | 0.00 | 0.00 | 36.87 | 2.41 |
1619 | 2412 | 5.173673 | CGCTACACGTACAAAAGAGTTACAA | 59.826 | 40.000 | 0.00 | 0.00 | 36.87 | 2.41 |
1620 | 2413 | 6.578691 | GCTACACGTACAAAAGAGTTACAAG | 58.421 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1621 | 2414 | 5.978934 | ACACGTACAAAAGAGTTACAAGG | 57.021 | 39.130 | 0.00 | 0.00 | 0.00 | 3.61 |
1622 | 2415 | 5.422145 | ACACGTACAAAAGAGTTACAAGGT | 58.578 | 37.500 | 0.00 | 0.00 | 0.00 | 3.50 |
1623 | 2416 | 5.876460 | ACACGTACAAAAGAGTTACAAGGTT | 59.124 | 36.000 | 0.00 | 0.00 | 0.00 | 3.50 |
1624 | 2417 | 6.372381 | ACACGTACAAAAGAGTTACAAGGTTT | 59.628 | 34.615 | 0.00 | 0.00 | 0.00 | 3.27 |
1625 | 2418 | 7.094677 | ACACGTACAAAAGAGTTACAAGGTTTT | 60.095 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
1626 | 2419 | 8.389603 | CACGTACAAAAGAGTTACAAGGTTTTA | 58.610 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
1627 | 2420 | 8.390354 | ACGTACAAAAGAGTTACAAGGTTTTAC | 58.610 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
1628 | 2421 | 8.389603 | CGTACAAAAGAGTTACAAGGTTTTACA | 58.610 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
1631 | 2424 | 9.634163 | ACAAAAGAGTTACAAGGTTTTACAAAG | 57.366 | 29.630 | 0.00 | 0.00 | 0.00 | 2.77 |
1632 | 2425 | 9.849166 | CAAAAGAGTTACAAGGTTTTACAAAGA | 57.151 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
1635 | 2428 | 8.221965 | AGAGTTACAAGGTTTTACAAAGAAGG | 57.778 | 34.615 | 0.00 | 0.00 | 0.00 | 3.46 |
1636 | 2429 | 7.832685 | AGAGTTACAAGGTTTTACAAAGAAGGT | 59.167 | 33.333 | 0.00 | 0.00 | 0.00 | 3.50 |
1637 | 2430 | 8.357290 | AGTTACAAGGTTTTACAAAGAAGGTT | 57.643 | 30.769 | 0.00 | 0.00 | 0.00 | 3.50 |
1638 | 2431 | 9.465199 | AGTTACAAGGTTTTACAAAGAAGGTTA | 57.535 | 29.630 | 0.00 | 0.00 | 0.00 | 2.85 |
1641 | 2434 | 8.357290 | ACAAGGTTTTACAAAGAAGGTTAACT | 57.643 | 30.769 | 5.42 | 0.00 | 0.00 | 2.24 |
1642 | 2435 | 8.809066 | ACAAGGTTTTACAAAGAAGGTTAACTT | 58.191 | 29.630 | 5.42 | 0.00 | 43.65 | 2.66 |
1643 | 2436 | 9.083080 | CAAGGTTTTACAAAGAAGGTTAACTTG | 57.917 | 33.333 | 5.42 | 4.40 | 40.21 | 3.16 |
1644 | 2437 | 8.584063 | AGGTTTTACAAAGAAGGTTAACTTGA | 57.416 | 30.769 | 5.42 | 0.00 | 40.21 | 3.02 |
1645 | 2438 | 9.197306 | AGGTTTTACAAAGAAGGTTAACTTGAT | 57.803 | 29.630 | 5.42 | 0.00 | 40.21 | 2.57 |
1646 | 2439 | 9.811995 | GGTTTTACAAAGAAGGTTAACTTGATT | 57.188 | 29.630 | 5.42 | 0.00 | 40.21 | 2.57 |
1648 | 2441 | 9.810545 | TTTTACAAAGAAGGTTAACTTGATTGG | 57.189 | 29.630 | 5.42 | 0.00 | 40.21 | 3.16 |
1649 | 2442 | 8.528044 | TTACAAAGAAGGTTAACTTGATTGGT | 57.472 | 30.769 | 5.42 | 3.43 | 40.21 | 3.67 |
1650 | 2443 | 7.039313 | ACAAAGAAGGTTAACTTGATTGGTC | 57.961 | 36.000 | 5.42 | 0.00 | 40.21 | 4.02 |
1651 | 2444 | 6.605594 | ACAAAGAAGGTTAACTTGATTGGTCA | 59.394 | 34.615 | 5.42 | 0.00 | 40.21 | 4.02 |
1652 | 2445 | 7.123547 | ACAAAGAAGGTTAACTTGATTGGTCAA | 59.876 | 33.333 | 5.42 | 0.00 | 40.21 | 3.18 |
1653 | 2446 | 7.839680 | AAGAAGGTTAACTTGATTGGTCAAT | 57.160 | 32.000 | 5.42 | 0.00 | 43.08 | 2.57 |
1654 | 2447 | 8.934023 | AAGAAGGTTAACTTGATTGGTCAATA | 57.066 | 30.769 | 5.42 | 0.00 | 43.08 | 1.90 |
1655 | 2448 | 8.567285 | AGAAGGTTAACTTGATTGGTCAATAG | 57.433 | 34.615 | 5.42 | 0.00 | 43.08 | 1.73 |
1656 | 2449 | 7.611855 | AGAAGGTTAACTTGATTGGTCAATAGG | 59.388 | 37.037 | 5.42 | 0.00 | 43.08 | 2.57 |
1657 | 2450 | 6.790319 | AGGTTAACTTGATTGGTCAATAGGT | 58.210 | 36.000 | 5.42 | 0.00 | 43.08 | 3.08 |
1658 | 2451 | 6.659242 | AGGTTAACTTGATTGGTCAATAGGTG | 59.341 | 38.462 | 5.42 | 0.00 | 43.08 | 4.00 |
1659 | 2452 | 6.657541 | GGTTAACTTGATTGGTCAATAGGTGA | 59.342 | 38.462 | 5.42 | 0.00 | 43.08 | 4.02 |
1660 | 2453 | 7.148239 | GGTTAACTTGATTGGTCAATAGGTGAG | 60.148 | 40.741 | 5.42 | 0.00 | 43.08 | 3.51 |
1661 | 2454 | 4.848357 | ACTTGATTGGTCAATAGGTGAGG | 58.152 | 43.478 | 0.00 | 0.00 | 43.08 | 3.86 |
1662 | 2455 | 4.536090 | ACTTGATTGGTCAATAGGTGAGGA | 59.464 | 41.667 | 0.00 | 0.00 | 43.08 | 3.71 |
1663 | 2456 | 5.014123 | ACTTGATTGGTCAATAGGTGAGGAA | 59.986 | 40.000 | 0.00 | 0.00 | 43.08 | 3.36 |
1664 | 2457 | 4.843728 | TGATTGGTCAATAGGTGAGGAAC | 58.156 | 43.478 | 0.00 | 0.00 | 36.74 | 3.62 |
1665 | 2458 | 4.288366 | TGATTGGTCAATAGGTGAGGAACA | 59.712 | 41.667 | 0.00 | 0.00 | 36.74 | 3.18 |
1666 | 2459 | 4.927267 | TTGGTCAATAGGTGAGGAACAT | 57.073 | 40.909 | 0.00 | 0.00 | 36.74 | 2.71 |
1667 | 2460 | 4.220693 | TGGTCAATAGGTGAGGAACATG | 57.779 | 45.455 | 0.00 | 0.00 | 36.74 | 3.21 |
1668 | 2461 | 3.054434 | TGGTCAATAGGTGAGGAACATGG | 60.054 | 47.826 | 0.00 | 0.00 | 36.74 | 3.66 |
1669 | 2462 | 2.945668 | GTCAATAGGTGAGGAACATGGC | 59.054 | 50.000 | 0.00 | 0.00 | 36.74 | 4.40 |
1670 | 2463 | 2.092429 | TCAATAGGTGAGGAACATGGCC | 60.092 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
1671 | 2464 | 0.846693 | ATAGGTGAGGAACATGGCCC | 59.153 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
1672 | 2465 | 0.548926 | TAGGTGAGGAACATGGCCCA | 60.549 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
1673 | 2466 | 1.678970 | GGTGAGGAACATGGCCCAC | 60.679 | 63.158 | 0.00 | 14.45 | 0.00 | 4.61 |
1674 | 2467 | 1.678970 | GTGAGGAACATGGCCCACC | 60.679 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
1675 | 2468 | 2.043953 | GAGGAACATGGCCCACCC | 60.044 | 66.667 | 0.00 | 0.00 | 33.59 | 4.61 |
1676 | 2469 | 3.662117 | GAGGAACATGGCCCACCCC | 62.662 | 68.421 | 0.00 | 0.00 | 33.59 | 4.95 |
1677 | 2470 | 3.672503 | GGAACATGGCCCACCCCT | 61.673 | 66.667 | 0.00 | 0.00 | 33.59 | 4.79 |
1678 | 2471 | 2.043953 | GAACATGGCCCACCCCTC | 60.044 | 66.667 | 0.00 | 0.00 | 33.59 | 4.30 |
1679 | 2472 | 2.535317 | AACATGGCCCACCCCTCT | 60.535 | 61.111 | 0.00 | 0.00 | 33.59 | 3.69 |
1680 | 2473 | 1.230149 | AACATGGCCCACCCCTCTA | 60.230 | 57.895 | 0.00 | 0.00 | 33.59 | 2.43 |
1681 | 2474 | 0.849094 | AACATGGCCCACCCCTCTAA | 60.849 | 55.000 | 0.00 | 0.00 | 33.59 | 2.10 |
1682 | 2475 | 0.849094 | ACATGGCCCACCCCTCTAAA | 60.849 | 55.000 | 0.00 | 0.00 | 33.59 | 1.85 |
1683 | 2476 | 0.334676 | CATGGCCCACCCCTCTAAAA | 59.665 | 55.000 | 0.00 | 0.00 | 33.59 | 1.52 |
1684 | 2477 | 1.089123 | ATGGCCCACCCCTCTAAAAA | 58.911 | 50.000 | 0.00 | 0.00 | 33.59 | 1.94 |
1685 | 2478 | 1.089123 | TGGCCCACCCCTCTAAAAAT | 58.911 | 50.000 | 0.00 | 0.00 | 33.59 | 1.82 |
1686 | 2479 | 1.006639 | TGGCCCACCCCTCTAAAAATC | 59.993 | 52.381 | 0.00 | 0.00 | 33.59 | 2.17 |
1687 | 2480 | 1.006639 | GGCCCACCCCTCTAAAAATCA | 59.993 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
1688 | 2481 | 2.379005 | GCCCACCCCTCTAAAAATCAG | 58.621 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
1689 | 2482 | 2.025321 | GCCCACCCCTCTAAAAATCAGA | 60.025 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1690 | 2483 | 3.891049 | CCCACCCCTCTAAAAATCAGAG | 58.109 | 50.000 | 0.00 | 0.00 | 39.44 | 3.35 |
1729 | 2522 | 2.745968 | GGGGGCAAGTTTATGATTGGA | 58.254 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
1730 | 2523 | 3.308401 | GGGGGCAAGTTTATGATTGGAT | 58.692 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
1731 | 2524 | 4.479158 | GGGGGCAAGTTTATGATTGGATA | 58.521 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
1732 | 2525 | 4.280929 | GGGGGCAAGTTTATGATTGGATAC | 59.719 | 45.833 | 0.00 | 0.00 | 0.00 | 2.24 |
1733 | 2526 | 5.140454 | GGGGCAAGTTTATGATTGGATACT | 58.860 | 41.667 | 0.00 | 0.00 | 37.61 | 2.12 |
1734 | 2527 | 6.303839 | GGGGCAAGTTTATGATTGGATACTA | 58.696 | 40.000 | 0.00 | 0.00 | 37.61 | 1.82 |
1735 | 2528 | 6.431234 | GGGGCAAGTTTATGATTGGATACTAG | 59.569 | 42.308 | 0.00 | 0.00 | 37.61 | 2.57 |
1736 | 2529 | 7.224297 | GGGCAAGTTTATGATTGGATACTAGA | 58.776 | 38.462 | 0.00 | 0.00 | 37.61 | 2.43 |
1737 | 2530 | 7.885399 | GGGCAAGTTTATGATTGGATACTAGAT | 59.115 | 37.037 | 0.00 | 0.00 | 37.61 | 1.98 |
1738 | 2531 | 8.725148 | GGCAAGTTTATGATTGGATACTAGATG | 58.275 | 37.037 | 0.00 | 0.00 | 37.61 | 2.90 |
1739 | 2532 | 9.494271 | GCAAGTTTATGATTGGATACTAGATGA | 57.506 | 33.333 | 0.00 | 0.00 | 37.61 | 2.92 |
1747 | 2540 | 7.957002 | TGATTGGATACTAGATGAAGAGAACC | 58.043 | 38.462 | 0.00 | 0.00 | 37.61 | 3.62 |
1748 | 2541 | 7.786943 | TGATTGGATACTAGATGAAGAGAACCT | 59.213 | 37.037 | 0.00 | 0.00 | 37.61 | 3.50 |
1749 | 2542 | 6.968263 | TGGATACTAGATGAAGAGAACCTG | 57.032 | 41.667 | 0.00 | 0.00 | 37.61 | 4.00 |
1750 | 2543 | 6.436027 | TGGATACTAGATGAAGAGAACCTGT | 58.564 | 40.000 | 0.00 | 0.00 | 37.61 | 4.00 |
1751 | 2544 | 7.583625 | TGGATACTAGATGAAGAGAACCTGTA | 58.416 | 38.462 | 0.00 | 0.00 | 37.61 | 2.74 |
1752 | 2545 | 8.059461 | TGGATACTAGATGAAGAGAACCTGTAA | 58.941 | 37.037 | 0.00 | 0.00 | 37.61 | 2.41 |
1753 | 2546 | 8.915036 | GGATACTAGATGAAGAGAACCTGTAAA | 58.085 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
1757 | 2550 | 8.261522 | ACTAGATGAAGAGAACCTGTAAAATCC | 58.738 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
1758 | 2551 | 7.264294 | AGATGAAGAGAACCTGTAAAATCCT | 57.736 | 36.000 | 0.00 | 0.00 | 0.00 | 3.24 |
1759 | 2552 | 7.108847 | AGATGAAGAGAACCTGTAAAATCCTG | 58.891 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
1760 | 2553 | 6.187727 | TGAAGAGAACCTGTAAAATCCTGT | 57.812 | 37.500 | 0.00 | 0.00 | 0.00 | 4.00 |
1761 | 2554 | 7.311092 | TGAAGAGAACCTGTAAAATCCTGTA | 57.689 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
1762 | 2555 | 7.918076 | TGAAGAGAACCTGTAAAATCCTGTAT | 58.082 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
1763 | 2556 | 8.383175 | TGAAGAGAACCTGTAAAATCCTGTATT | 58.617 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
1764 | 2557 | 8.794335 | AAGAGAACCTGTAAAATCCTGTATTC | 57.206 | 34.615 | 0.00 | 0.00 | 0.00 | 1.75 |
1765 | 2558 | 8.152023 | AGAGAACCTGTAAAATCCTGTATTCT | 57.848 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
1766 | 2559 | 8.606830 | AGAGAACCTGTAAAATCCTGTATTCTT | 58.393 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
1767 | 2560 | 9.232473 | GAGAACCTGTAAAATCCTGTATTCTTT | 57.768 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
1768 | 2561 | 9.588096 | AGAACCTGTAAAATCCTGTATTCTTTT | 57.412 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
1769 | 2562 | 9.626045 | GAACCTGTAAAATCCTGTATTCTTTTG | 57.374 | 33.333 | 0.00 | 0.00 | 0.00 | 2.44 |
1770 | 2563 | 8.706322 | ACCTGTAAAATCCTGTATTCTTTTGT | 57.294 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
1771 | 2564 | 9.802039 | ACCTGTAAAATCCTGTATTCTTTTGTA | 57.198 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
1773 | 2566 | 9.755064 | CTGTAAAATCCTGTATTCTTTTGTACG | 57.245 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
1774 | 2567 | 9.275398 | TGTAAAATCCTGTATTCTTTTGTACGT | 57.725 | 29.630 | 0.00 | 0.00 | 0.00 | 3.57 |
1775 | 2568 | 9.750882 | GTAAAATCCTGTATTCTTTTGTACGTC | 57.249 | 33.333 | 0.00 | 0.00 | 0.00 | 4.34 |
1776 | 2569 | 8.617290 | AAAATCCTGTATTCTTTTGTACGTCT | 57.383 | 30.769 | 0.00 | 0.00 | 0.00 | 4.18 |
1777 | 2570 | 9.715121 | AAAATCCTGTATTCTTTTGTACGTCTA | 57.285 | 29.630 | 0.00 | 0.00 | 0.00 | 2.59 |
1778 | 2571 | 8.928270 | AATCCTGTATTCTTTTGTACGTCTAG | 57.072 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
1779 | 2572 | 6.327934 | TCCTGTATTCTTTTGTACGTCTAGC | 58.672 | 40.000 | 0.00 | 0.00 | 0.00 | 3.42 |
1780 | 2573 | 6.071784 | TCCTGTATTCTTTTGTACGTCTAGCA | 60.072 | 38.462 | 0.00 | 0.00 | 0.00 | 3.49 |
1781 | 2574 | 6.757010 | CCTGTATTCTTTTGTACGTCTAGCAT | 59.243 | 38.462 | 0.00 | 0.00 | 0.00 | 3.79 |
1782 | 2575 | 7.277981 | CCTGTATTCTTTTGTACGTCTAGCATT | 59.722 | 37.037 | 0.00 | 0.00 | 0.00 | 3.56 |
1783 | 2576 | 8.542497 | TGTATTCTTTTGTACGTCTAGCATTT | 57.458 | 30.769 | 0.00 | 0.00 | 0.00 | 2.32 |
1784 | 2577 | 8.995220 | TGTATTCTTTTGTACGTCTAGCATTTT | 58.005 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
1785 | 2578 | 9.821662 | GTATTCTTTTGTACGTCTAGCATTTTT | 57.178 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
1786 | 2579 | 8.728088 | ATTCTTTTGTACGTCTAGCATTTTTG | 57.272 | 30.769 | 0.00 | 0.00 | 0.00 | 2.44 |
1787 | 2580 | 6.664515 | TCTTTTGTACGTCTAGCATTTTTGG | 58.335 | 36.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1788 | 2581 | 5.365403 | TTTGTACGTCTAGCATTTTTGGG | 57.635 | 39.130 | 0.00 | 0.00 | 0.00 | 4.12 |
1789 | 2582 | 2.745281 | TGTACGTCTAGCATTTTTGGGC | 59.255 | 45.455 | 0.00 | 0.00 | 0.00 | 5.36 |
1790 | 2583 | 2.200373 | ACGTCTAGCATTTTTGGGCT | 57.800 | 45.000 | 0.00 | 0.00 | 43.94 | 5.19 |
1795 | 2588 | 3.439129 | GTCTAGCATTTTTGGGCTTACGT | 59.561 | 43.478 | 0.00 | 0.00 | 41.41 | 3.57 |
1799 | 2592 | 2.327568 | CATTTTTGGGCTTACGTGCAG | 58.672 | 47.619 | 0.00 | 0.00 | 34.04 | 4.41 |
1824 | 2617 | 7.669722 | AGAAACCATTAGCATTTTCTCCAACTA | 59.330 | 33.333 | 0.00 | 0.00 | 33.94 | 2.24 |
1829 | 2622 | 4.373156 | AGCATTTTCTCCAACTACCAGT | 57.627 | 40.909 | 0.00 | 0.00 | 0.00 | 4.00 |
1833 | 2626 | 5.122396 | GCATTTTCTCCAACTACCAGTACAG | 59.878 | 44.000 | 0.00 | 0.00 | 0.00 | 2.74 |
1834 | 2627 | 6.464222 | CATTTTCTCCAACTACCAGTACAGA | 58.536 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1835 | 2628 | 6.488769 | TTTTCTCCAACTACCAGTACAGAA | 57.511 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
1836 | 2629 | 6.488769 | TTTCTCCAACTACCAGTACAGAAA | 57.511 | 37.500 | 0.00 | 0.00 | 30.88 | 2.52 |
1837 | 2630 | 6.681729 | TTCTCCAACTACCAGTACAGAAAT | 57.318 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
1838 | 2631 | 6.282199 | TCTCCAACTACCAGTACAGAAATC | 57.718 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
1839 | 2632 | 5.187186 | TCTCCAACTACCAGTACAGAAATCC | 59.813 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1840 | 2633 | 4.224370 | TCCAACTACCAGTACAGAAATCCC | 59.776 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
1841 | 2634 | 4.019681 | CCAACTACCAGTACAGAAATCCCA | 60.020 | 45.833 | 0.00 | 0.00 | 0.00 | 4.37 |
1842 | 2635 | 5.339200 | CCAACTACCAGTACAGAAATCCCAT | 60.339 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1843 | 2636 | 6.180472 | CAACTACCAGTACAGAAATCCCATT | 58.820 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1844 | 2637 | 5.990668 | ACTACCAGTACAGAAATCCCATTC | 58.009 | 41.667 | 0.00 | 0.00 | 0.00 | 2.67 |
1845 | 2638 | 4.236527 | ACCAGTACAGAAATCCCATTCC | 57.763 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
1846 | 2639 | 3.852578 | ACCAGTACAGAAATCCCATTCCT | 59.147 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
1847 | 2640 | 5.036916 | ACCAGTACAGAAATCCCATTCCTA | 58.963 | 41.667 | 0.00 | 0.00 | 0.00 | 2.94 |
1848 | 2641 | 5.104485 | ACCAGTACAGAAATCCCATTCCTAC | 60.104 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1849 | 2642 | 5.050490 | CAGTACAGAAATCCCATTCCTACG | 58.950 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
1850 | 2643 | 4.715297 | AGTACAGAAATCCCATTCCTACGT | 59.285 | 41.667 | 0.00 | 0.00 | 0.00 | 3.57 |
1851 | 2644 | 5.895534 | AGTACAGAAATCCCATTCCTACGTA | 59.104 | 40.000 | 0.00 | 0.00 | 0.00 | 3.57 |
1852 | 2645 | 5.019785 | ACAGAAATCCCATTCCTACGTAC | 57.980 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
1853 | 2646 | 4.049186 | CAGAAATCCCATTCCTACGTACG | 58.951 | 47.826 | 15.01 | 15.01 | 0.00 | 3.67 |
1854 | 2647 | 2.521105 | AATCCCATTCCTACGTACGC | 57.479 | 50.000 | 16.72 | 0.00 | 0.00 | 4.42 |
1855 | 2648 | 0.677842 | ATCCCATTCCTACGTACGCC | 59.322 | 55.000 | 16.72 | 0.00 | 0.00 | 5.68 |
1856 | 2649 | 0.396139 | TCCCATTCCTACGTACGCCT | 60.396 | 55.000 | 16.72 | 0.00 | 0.00 | 5.52 |
1857 | 2650 | 0.462789 | CCCATTCCTACGTACGCCTT | 59.537 | 55.000 | 16.72 | 0.00 | 0.00 | 4.35 |
1858 | 2651 | 1.537562 | CCCATTCCTACGTACGCCTTC | 60.538 | 57.143 | 16.72 | 0.00 | 0.00 | 3.46 |
1859 | 2652 | 1.407979 | CCATTCCTACGTACGCCTTCT | 59.592 | 52.381 | 16.72 | 0.00 | 0.00 | 2.85 |
1860 | 2653 | 2.620115 | CCATTCCTACGTACGCCTTCTA | 59.380 | 50.000 | 16.72 | 0.00 | 0.00 | 2.10 |
1861 | 2654 | 3.549625 | CCATTCCTACGTACGCCTTCTAC | 60.550 | 52.174 | 16.72 | 0.00 | 0.00 | 2.59 |
1862 | 2655 | 2.401583 | TCCTACGTACGCCTTCTACA | 57.598 | 50.000 | 16.72 | 0.00 | 0.00 | 2.74 |
1863 | 2656 | 2.283298 | TCCTACGTACGCCTTCTACAG | 58.717 | 52.381 | 16.72 | 0.00 | 0.00 | 2.74 |
1864 | 2657 | 2.093500 | TCCTACGTACGCCTTCTACAGA | 60.093 | 50.000 | 16.72 | 0.00 | 0.00 | 3.41 |
1865 | 2658 | 2.679837 | CCTACGTACGCCTTCTACAGAA | 59.320 | 50.000 | 16.72 | 0.00 | 0.00 | 3.02 |
1893 | 2686 | 9.189723 | GTTTACGTATCCATAAGATTGAGGTAC | 57.810 | 37.037 | 0.00 | 0.00 | 36.33 | 3.34 |
1911 | 2704 | 7.442656 | TGAGGTACTTCAGACTTTCCTTTTAG | 58.557 | 38.462 | 3.11 | 0.00 | 41.55 | 1.85 |
1918 | 2711 | 3.564225 | CAGACTTTCCTTTTAGCGTGGTT | 59.436 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
1919 | 2712 | 4.036380 | CAGACTTTCCTTTTAGCGTGGTTT | 59.964 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
1920 | 2713 | 4.275196 | AGACTTTCCTTTTAGCGTGGTTTC | 59.725 | 41.667 | 0.00 | 0.00 | 0.00 | 2.78 |
1961 | 2755 | 4.093408 | CAGAAGCATGTATACACGCACTTT | 59.907 | 41.667 | 24.33 | 11.14 | 37.55 | 2.66 |
1963 | 2757 | 2.677836 | AGCATGTATACACGCACTTTGG | 59.322 | 45.455 | 24.33 | 1.00 | 37.55 | 3.28 |
1964 | 2758 | 2.791158 | GCATGTATACACGCACTTTGGC | 60.791 | 50.000 | 18.47 | 3.47 | 34.84 | 4.52 |
1967 | 2762 | 3.078097 | TGTATACACGCACTTTGGCATT | 58.922 | 40.909 | 0.08 | 0.00 | 0.00 | 3.56 |
1979 | 2774 | 4.212425 | CACTTTGGCATTTCAGTACACGTA | 59.788 | 41.667 | 0.00 | 0.00 | 0.00 | 3.57 |
1997 | 2792 | 7.074507 | ACACGTACAGTTGTTTGTTGAATTA | 57.925 | 32.000 | 0.00 | 0.00 | 32.56 | 1.40 |
1998 | 2793 | 7.528307 | ACACGTACAGTTGTTTGTTGAATTAA | 58.472 | 30.769 | 0.00 | 0.00 | 32.56 | 1.40 |
2000 | 2795 | 9.653067 | CACGTACAGTTGTTTGTTGAATTAATA | 57.347 | 29.630 | 0.00 | 0.00 | 32.56 | 0.98 |
2001 | 2796 | 9.654417 | ACGTACAGTTGTTTGTTGAATTAATAC | 57.346 | 29.630 | 0.00 | 0.00 | 32.56 | 1.89 |
2002 | 2797 | 9.109533 | CGTACAGTTGTTTGTTGAATTAATACC | 57.890 | 33.333 | 0.00 | 0.00 | 32.56 | 2.73 |
2003 | 2798 | 9.953697 | GTACAGTTGTTTGTTGAATTAATACCA | 57.046 | 29.630 | 0.00 | 0.00 | 32.56 | 3.25 |
2116 | 4095 | 0.605319 | TGCACGGGTCCTGATGTTTC | 60.605 | 55.000 | 4.16 | 0.00 | 0.00 | 2.78 |
2278 | 4266 | 0.318784 | ACGTCAAGGACTGCGACTTC | 60.319 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2281 | 4269 | 1.068748 | GTCAAGGACTGCGACTTCGTA | 60.069 | 52.381 | 0.00 | 0.00 | 42.22 | 3.43 |
2369 | 4357 | 3.976490 | AACCCCGAGATCGCCCTCA | 62.976 | 63.158 | 0.00 | 0.00 | 38.18 | 3.86 |
2457 | 6536 | 2.756760 | ACTGCATGGTGATGACATTTCC | 59.243 | 45.455 | 0.00 | 0.00 | 0.00 | 3.13 |
2462 | 6541 | 2.170166 | TGGTGATGACATTTCCCTTGC | 58.830 | 47.619 | 7.18 | 0.00 | 0.00 | 4.01 |
2629 | 6724 | 9.669353 | AAACATTTGATCTCGCAATATATGAAC | 57.331 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
2657 | 6752 | 3.368739 | CCATTTTCATTTGTGAGGCCTCC | 60.369 | 47.826 | 29.95 | 20.55 | 0.00 | 4.30 |
2678 | 6852 | 5.593010 | TCCGTGTTTCCTTTTTACCAATTG | 58.407 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
2684 | 6858 | 6.642950 | TGTTTCCTTTTTACCAATTGTATGCG | 59.357 | 34.615 | 4.43 | 0.00 | 0.00 | 4.73 |
2686 | 6860 | 7.450124 | TTCCTTTTTACCAATTGTATGCGTA | 57.550 | 32.000 | 4.43 | 0.00 | 0.00 | 4.42 |
2741 | 7022 | 5.486735 | AAGGAAACATGGCATCAAATCAA | 57.513 | 34.783 | 0.00 | 0.00 | 0.00 | 2.57 |
2789 | 7071 | 2.790433 | TCAGTGTACCATTTGCCTTCC | 58.210 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 |
2792 | 7074 | 1.883926 | GTGTACCATTTGCCTTCCGTT | 59.116 | 47.619 | 0.00 | 0.00 | 0.00 | 4.44 |
2844 | 7144 | 7.778382 | GGAAACCAAGGGACACAATAGTATTAT | 59.222 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
2845 | 7145 | 9.185680 | GAAACCAAGGGACACAATAGTATTATT | 57.814 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2889 | 7189 | 7.056006 | TGCAACATGATCAGAGTTACCATTAT | 58.944 | 34.615 | 13.95 | 0.00 | 0.00 | 1.28 |
2898 | 7198 | 8.839310 | ATCAGAGTTACCATTATGCAGATAAC | 57.161 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
2908 | 7208 | 0.455410 | TGCAGATAACCAATTGCGCC | 59.545 | 50.000 | 4.18 | 0.00 | 39.34 | 6.53 |
2945 | 7245 | 1.605058 | GCAGCTCTAGGTCCAACCGA | 61.605 | 60.000 | 0.00 | 0.00 | 44.90 | 4.69 |
3001 | 7301 | 8.421002 | TGATCGAGATAACACAATTGAAGGATA | 58.579 | 33.333 | 13.59 | 1.13 | 0.00 | 2.59 |
3010 | 7316 | 7.552050 | ACACAATTGAAGGATAAAATTCCCA | 57.448 | 32.000 | 13.59 | 0.00 | 36.35 | 4.37 |
3030 | 7641 | 9.981460 | ATTCCCAATATATATTTTCCTGGAGTC | 57.019 | 33.333 | 5.18 | 0.00 | 0.00 | 3.36 |
3034 | 7645 | 9.224267 | CCAATATATATTTTCCTGGAGTCACTG | 57.776 | 37.037 | 5.18 | 0.00 | 0.00 | 3.66 |
3051 | 7662 | 7.254966 | GGAGTCACTGACAGATAGTAGTACATG | 60.255 | 44.444 | 10.08 | 0.00 | 34.60 | 3.21 |
3061 | 7672 | 7.147655 | ACAGATAGTAGTACATGCTTGACCATT | 60.148 | 37.037 | 6.60 | 0.00 | 0.00 | 3.16 |
3127 | 7741 | 9.508567 | GATCCTTCTTAACATGCAAAATACTTC | 57.491 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
3225 | 7839 | 0.837691 | AGACATGGACCTGGCAGTCA | 60.838 | 55.000 | 14.43 | 9.15 | 38.59 | 3.41 |
3437 | 8093 | 2.621338 | CAGCAACATAGATGGTCGTGT | 58.379 | 47.619 | 0.00 | 0.00 | 0.00 | 4.49 |
3491 | 8147 | 7.174413 | TGATGGAGATTGTCAAAAATCAGGTA | 58.826 | 34.615 | 0.00 | 0.00 | 38.74 | 3.08 |
3678 | 8472 | 0.698238 | ACTGCCTTGTTATCCCAGCA | 59.302 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
3729 | 8523 | 4.472108 | CCAAGGTGGGGTTACTTCTACATA | 59.528 | 45.833 | 0.00 | 0.00 | 32.67 | 2.29 |
3926 | 8732 | 5.679734 | ACTGTTTGAGAATGTCATGTCAC | 57.320 | 39.130 | 0.00 | 0.00 | 34.17 | 3.67 |
4275 | 9083 | 1.068417 | CTTTGTCGTCGGTGTGGGA | 59.932 | 57.895 | 0.00 | 0.00 | 0.00 | 4.37 |
4314 | 9122 | 2.487934 | CCCAACTGATAATGCTCTCCG | 58.512 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
4335 | 9143 | 3.424302 | CGTTCATGGTGTAATGTTGTCCG | 60.424 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
4354 | 9162 | 4.753107 | GTCCGGAAAGATTCAGTGTAACAA | 59.247 | 41.667 | 5.23 | 0.00 | 41.43 | 2.83 |
4513 | 9326 | 5.740406 | TCGTTTGTCCGAAAAGAATAACAC | 58.260 | 37.500 | 0.00 | 0.00 | 33.15 | 3.32 |
4575 | 9388 | 4.074799 | TGTGGGAAGAGGAGGAAATAGA | 57.925 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
4595 | 9408 | 0.312102 | GTCTGGTGCCTCAACTTTGC | 59.688 | 55.000 | 0.00 | 0.00 | 0.00 | 3.68 |
4596 | 9409 | 0.823356 | TCTGGTGCCTCAACTTTGCC | 60.823 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
4597 | 9410 | 1.809567 | CTGGTGCCTCAACTTTGCCC | 61.810 | 60.000 | 0.00 | 0.00 | 0.00 | 5.36 |
4598 | 9411 | 1.832167 | GGTGCCTCAACTTTGCCCA | 60.832 | 57.895 | 0.00 | 0.00 | 0.00 | 5.36 |
4599 | 9412 | 1.363807 | GTGCCTCAACTTTGCCCAC | 59.636 | 57.895 | 0.00 | 0.00 | 0.00 | 4.61 |
4600 | 9413 | 1.832167 | TGCCTCAACTTTGCCCACC | 60.832 | 57.895 | 0.00 | 0.00 | 0.00 | 4.61 |
4601 | 9414 | 1.531602 | GCCTCAACTTTGCCCACCT | 60.532 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
4602 | 9415 | 1.809567 | GCCTCAACTTTGCCCACCTG | 61.810 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4603 | 9416 | 0.178992 | CCTCAACTTTGCCCACCTGA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4604 | 9417 | 1.548582 | CCTCAACTTTGCCCACCTGAT | 60.549 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
4605 | 9418 | 2.290896 | CCTCAACTTTGCCCACCTGATA | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
4606 | 9419 | 3.012518 | CTCAACTTTGCCCACCTGATAG | 58.987 | 50.000 | 0.00 | 0.00 | 0.00 | 2.08 |
4607 | 9420 | 2.094675 | CAACTTTGCCCACCTGATAGG | 58.905 | 52.381 | 0.00 | 0.00 | 42.49 | 2.57 |
4693 | 9517 | 9.745018 | CATAATTTATATCTCCCCTGTCAATGT | 57.255 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
4776 | 9600 | 0.251787 | TGGCACTAGCTGACCTGAGA | 60.252 | 55.000 | 0.00 | 0.00 | 41.70 | 3.27 |
4865 | 9689 | 2.814805 | AACATCCCCTTCAGATGGTG | 57.185 | 50.000 | 5.80 | 0.00 | 44.45 | 4.17 |
4976 | 9802 | 2.285773 | ACATCTCCGACCAGCAGCA | 61.286 | 57.895 | 0.00 | 0.00 | 0.00 | 4.41 |
4979 | 9805 | 0.179062 | ATCTCCGACCAGCAGCAATC | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 2.67 |
4985 | 9811 | 3.126879 | CCAGCAGCAATCGCCGAA | 61.127 | 61.111 | 0.00 | 0.00 | 39.83 | 4.30 |
4988 | 9814 | 3.803082 | GCAGCAATCGCCGAAGCA | 61.803 | 61.111 | 15.61 | 0.00 | 39.83 | 3.91 |
4989 | 9815 | 2.402388 | CAGCAATCGCCGAAGCAG | 59.598 | 61.111 | 15.61 | 5.47 | 39.83 | 4.24 |
4996 | 9825 | 0.464036 | ATCGCCGAAGCAGTCCATAA | 59.536 | 50.000 | 0.00 | 0.00 | 39.83 | 1.90 |
5181 | 10010 | 3.425122 | CATGGCCTCATGCATACCA | 57.575 | 52.632 | 3.32 | 5.60 | 43.44 | 3.25 |
5186 | 10015 | 0.538977 | GCCTCATGCATACCAGCCAT | 60.539 | 55.000 | 0.00 | 0.00 | 40.77 | 4.40 |
5232 | 10061 | 2.050714 | GTGTTCGCGAGGACGACA | 60.051 | 61.111 | 9.59 | 7.81 | 44.80 | 4.35 |
5241 | 10070 | 0.456221 | CGAGGACGACATACTTGCCT | 59.544 | 55.000 | 0.00 | 0.00 | 42.66 | 4.75 |
5269 | 10098 | 2.331265 | GGTTGCAGCCGAAAGAAGT | 58.669 | 52.632 | 2.95 | 0.00 | 0.00 | 3.01 |
5272 | 10101 | 2.116736 | TTGCAGCCGAAAGAAGTGCG | 62.117 | 55.000 | 0.00 | 0.00 | 36.92 | 5.34 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
201 | 202 | 1.078356 | GAAGAACTCTTCCCCCGGC | 60.078 | 63.158 | 8.07 | 0.00 | 44.93 | 6.13 |
209 | 210 | 4.279420 | GGCTTCAAATGTGGAAGAACTCTT | 59.721 | 41.667 | 6.35 | 0.00 | 43.46 | 2.85 |
410 | 1066 | 7.389053 | TCAATAAACCCAATTAATGTGTTTGCC | 59.611 | 33.333 | 15.25 | 0.00 | 39.50 | 4.52 |
450 | 1109 | 8.716646 | TGTATTTGTTGTACACATGGATAGAG | 57.283 | 34.615 | 0.00 | 0.00 | 34.43 | 2.43 |
451 | 1110 | 9.679661 | ATTGTATTTGTTGTACACATGGATAGA | 57.320 | 29.630 | 0.00 | 0.00 | 34.43 | 1.98 |
452 | 1111 | 9.935682 | GATTGTATTTGTTGTACACATGGATAG | 57.064 | 33.333 | 0.00 | 0.00 | 34.43 | 2.08 |
485 | 1144 | 6.102897 | TCAGTCTAATTAGGCCTAGATTGC | 57.897 | 41.667 | 16.99 | 12.14 | 33.92 | 3.56 |
572 | 1315 | 3.719173 | TCGTGCACGATATGGTCAATA | 57.281 | 42.857 | 36.40 | 11.37 | 44.22 | 1.90 |
598 | 1341 | 6.364701 | AGCTGATTTGGCTATATTGGTTGTA | 58.635 | 36.000 | 0.00 | 0.00 | 38.36 | 2.41 |
810 | 1595 | 3.766691 | CGTCGGGTAGGGGTGGTG | 61.767 | 72.222 | 0.00 | 0.00 | 0.00 | 4.17 |
828 | 1613 | 3.917760 | GAGGGACGGAGGCGATGG | 61.918 | 72.222 | 0.00 | 0.00 | 0.00 | 3.51 |
885 | 1670 | 2.032681 | GTCAGGGTGCTGGTGGTC | 59.967 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
947 | 1735 | 3.988517 | AGTAAACTAGCAGCGACAAGAAC | 59.011 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
1248 | 2036 | 2.238646 | GTTGTACATGGGGATCTGGACA | 59.761 | 50.000 | 0.00 | 0.00 | 34.42 | 4.02 |
1325 | 2113 | 0.861866 | CCGTACAGCGACGTGATCTG | 60.862 | 60.000 | 0.00 | 0.00 | 44.77 | 2.90 |
1327 | 2115 | 0.029035 | ATCCGTACAGCGACGTGATC | 59.971 | 55.000 | 0.00 | 0.00 | 44.77 | 2.92 |
1328 | 2116 | 0.454600 | AATCCGTACAGCGACGTGAT | 59.545 | 50.000 | 0.00 | 7.28 | 44.77 | 3.06 |
1329 | 2117 | 0.241749 | AAATCCGTACAGCGACGTGA | 59.758 | 50.000 | 0.00 | 5.64 | 44.77 | 4.35 |
1502 | 2295 | 3.000819 | ATCCGACGGCCAGGACAA | 61.001 | 61.111 | 9.66 | 0.00 | 39.66 | 3.18 |
1596 | 2389 | 6.346359 | CCTTGTAACTCTTTTGTACGTGTAGC | 60.346 | 42.308 | 0.00 | 0.00 | 0.00 | 3.58 |
1597 | 2390 | 6.698766 | ACCTTGTAACTCTTTTGTACGTGTAG | 59.301 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
1598 | 2391 | 6.572519 | ACCTTGTAACTCTTTTGTACGTGTA | 58.427 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1599 | 2392 | 5.422145 | ACCTTGTAACTCTTTTGTACGTGT | 58.578 | 37.500 | 0.00 | 0.00 | 0.00 | 4.49 |
1600 | 2393 | 5.978934 | ACCTTGTAACTCTTTTGTACGTG | 57.021 | 39.130 | 0.00 | 0.00 | 0.00 | 4.49 |
1601 | 2394 | 6.990341 | AAACCTTGTAACTCTTTTGTACGT | 57.010 | 33.333 | 0.00 | 0.00 | 0.00 | 3.57 |
1602 | 2395 | 8.389603 | TGTAAAACCTTGTAACTCTTTTGTACG | 58.610 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
1605 | 2398 | 9.634163 | CTTTGTAAAACCTTGTAACTCTTTTGT | 57.366 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
1606 | 2399 | 9.849166 | TCTTTGTAAAACCTTGTAACTCTTTTG | 57.151 | 29.630 | 0.00 | 0.00 | 0.00 | 2.44 |
1609 | 2402 | 8.683615 | CCTTCTTTGTAAAACCTTGTAACTCTT | 58.316 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
1610 | 2403 | 7.832685 | ACCTTCTTTGTAAAACCTTGTAACTCT | 59.167 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
1611 | 2404 | 7.993101 | ACCTTCTTTGTAAAACCTTGTAACTC | 58.007 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
1612 | 2405 | 7.949690 | ACCTTCTTTGTAAAACCTTGTAACT | 57.050 | 32.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1615 | 2408 | 9.465199 | AGTTAACCTTCTTTGTAAAACCTTGTA | 57.535 | 29.630 | 0.88 | 0.00 | 0.00 | 2.41 |
1616 | 2409 | 8.357290 | AGTTAACCTTCTTTGTAAAACCTTGT | 57.643 | 30.769 | 0.88 | 0.00 | 0.00 | 3.16 |
1617 | 2410 | 9.083080 | CAAGTTAACCTTCTTTGTAAAACCTTG | 57.917 | 33.333 | 0.88 | 0.00 | 0.00 | 3.61 |
1618 | 2411 | 9.027202 | TCAAGTTAACCTTCTTTGTAAAACCTT | 57.973 | 29.630 | 0.88 | 0.00 | 0.00 | 3.50 |
1619 | 2412 | 8.584063 | TCAAGTTAACCTTCTTTGTAAAACCT | 57.416 | 30.769 | 0.88 | 0.00 | 0.00 | 3.50 |
1620 | 2413 | 9.811995 | AATCAAGTTAACCTTCTTTGTAAAACC | 57.188 | 29.630 | 0.88 | 0.00 | 0.00 | 3.27 |
1622 | 2415 | 9.810545 | CCAATCAAGTTAACCTTCTTTGTAAAA | 57.189 | 29.630 | 0.88 | 0.00 | 0.00 | 1.52 |
1623 | 2416 | 8.973182 | ACCAATCAAGTTAACCTTCTTTGTAAA | 58.027 | 29.630 | 0.88 | 0.00 | 0.00 | 2.01 |
1624 | 2417 | 8.528044 | ACCAATCAAGTTAACCTTCTTTGTAA | 57.472 | 30.769 | 0.88 | 0.00 | 0.00 | 2.41 |
1625 | 2418 | 7.776030 | TGACCAATCAAGTTAACCTTCTTTGTA | 59.224 | 33.333 | 0.88 | 0.00 | 0.00 | 2.41 |
1626 | 2419 | 6.605594 | TGACCAATCAAGTTAACCTTCTTTGT | 59.394 | 34.615 | 0.88 | 0.00 | 0.00 | 2.83 |
1627 | 2420 | 7.038154 | TGACCAATCAAGTTAACCTTCTTTG | 57.962 | 36.000 | 0.88 | 0.05 | 0.00 | 2.77 |
1628 | 2421 | 7.654022 | TTGACCAATCAAGTTAACCTTCTTT | 57.346 | 32.000 | 0.88 | 0.00 | 40.01 | 2.52 |
1642 | 2435 | 4.288366 | TGTTCCTCACCTATTGACCAATCA | 59.712 | 41.667 | 0.00 | 0.00 | 32.50 | 2.57 |
1643 | 2436 | 4.843728 | TGTTCCTCACCTATTGACCAATC | 58.156 | 43.478 | 0.00 | 0.00 | 32.50 | 2.67 |
1644 | 2437 | 4.927267 | TGTTCCTCACCTATTGACCAAT | 57.073 | 40.909 | 0.64 | 0.64 | 34.93 | 3.16 |
1645 | 2438 | 4.567537 | CCATGTTCCTCACCTATTGACCAA | 60.568 | 45.833 | 0.00 | 0.00 | 0.00 | 3.67 |
1646 | 2439 | 3.054434 | CCATGTTCCTCACCTATTGACCA | 60.054 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
1647 | 2440 | 3.545703 | CCATGTTCCTCACCTATTGACC | 58.454 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1648 | 2441 | 2.945668 | GCCATGTTCCTCACCTATTGAC | 59.054 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1649 | 2442 | 2.092429 | GGCCATGTTCCTCACCTATTGA | 60.092 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1650 | 2443 | 2.301346 | GGCCATGTTCCTCACCTATTG | 58.699 | 52.381 | 0.00 | 0.00 | 0.00 | 1.90 |
1651 | 2444 | 1.215423 | GGGCCATGTTCCTCACCTATT | 59.785 | 52.381 | 4.39 | 0.00 | 0.00 | 1.73 |
1652 | 2445 | 0.846693 | GGGCCATGTTCCTCACCTAT | 59.153 | 55.000 | 4.39 | 0.00 | 0.00 | 2.57 |
1653 | 2446 | 0.548926 | TGGGCCATGTTCCTCACCTA | 60.549 | 55.000 | 0.00 | 0.00 | 0.00 | 3.08 |
1654 | 2447 | 1.852157 | TGGGCCATGTTCCTCACCT | 60.852 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
1655 | 2448 | 1.678970 | GTGGGCCATGTTCCTCACC | 60.679 | 63.158 | 10.70 | 0.00 | 0.00 | 4.02 |
1656 | 2449 | 1.678970 | GGTGGGCCATGTTCCTCAC | 60.679 | 63.158 | 10.70 | 0.00 | 34.09 | 3.51 |
1657 | 2450 | 2.763215 | GGTGGGCCATGTTCCTCA | 59.237 | 61.111 | 10.70 | 0.00 | 34.09 | 3.86 |
1658 | 2451 | 2.043953 | GGGTGGGCCATGTTCCTC | 60.044 | 66.667 | 10.70 | 0.00 | 36.17 | 3.71 |
1659 | 2452 | 3.672503 | GGGGTGGGCCATGTTCCT | 61.673 | 66.667 | 10.70 | 0.00 | 36.17 | 3.36 |
1660 | 2453 | 3.662117 | GAGGGGTGGGCCATGTTCC | 62.662 | 68.421 | 10.70 | 5.81 | 36.17 | 3.62 |
1661 | 2454 | 1.279025 | TAGAGGGGTGGGCCATGTTC | 61.279 | 60.000 | 10.70 | 5.83 | 36.17 | 3.18 |
1662 | 2455 | 0.849094 | TTAGAGGGGTGGGCCATGTT | 60.849 | 55.000 | 10.70 | 0.00 | 36.17 | 2.71 |
1663 | 2456 | 0.849094 | TTTAGAGGGGTGGGCCATGT | 60.849 | 55.000 | 10.70 | 0.00 | 36.17 | 3.21 |
1664 | 2457 | 0.334676 | TTTTAGAGGGGTGGGCCATG | 59.665 | 55.000 | 10.70 | 0.00 | 36.17 | 3.66 |
1665 | 2458 | 1.089123 | TTTTTAGAGGGGTGGGCCAT | 58.911 | 50.000 | 10.70 | 0.00 | 36.17 | 4.40 |
1666 | 2459 | 1.006639 | GATTTTTAGAGGGGTGGGCCA | 59.993 | 52.381 | 0.00 | 0.00 | 36.17 | 5.36 |
1667 | 2460 | 1.006639 | TGATTTTTAGAGGGGTGGGCC | 59.993 | 52.381 | 0.00 | 0.00 | 0.00 | 5.80 |
1668 | 2461 | 2.025321 | TCTGATTTTTAGAGGGGTGGGC | 60.025 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
1669 | 2462 | 3.891049 | CTCTGATTTTTAGAGGGGTGGG | 58.109 | 50.000 | 0.00 | 0.00 | 38.37 | 4.61 |
1709 | 2502 | 2.745968 | TCCAATCATAAACTTGCCCCC | 58.254 | 47.619 | 0.00 | 0.00 | 0.00 | 5.40 |
1710 | 2503 | 5.140454 | AGTATCCAATCATAAACTTGCCCC | 58.860 | 41.667 | 0.00 | 0.00 | 0.00 | 5.80 |
1711 | 2504 | 7.224297 | TCTAGTATCCAATCATAAACTTGCCC | 58.776 | 38.462 | 0.00 | 0.00 | 0.00 | 5.36 |
1712 | 2505 | 8.725148 | CATCTAGTATCCAATCATAAACTTGCC | 58.275 | 37.037 | 0.00 | 0.00 | 0.00 | 4.52 |
1713 | 2506 | 9.494271 | TCATCTAGTATCCAATCATAAACTTGC | 57.506 | 33.333 | 0.00 | 0.00 | 0.00 | 4.01 |
1721 | 2514 | 8.592809 | GGTTCTCTTCATCTAGTATCCAATCAT | 58.407 | 37.037 | 0.00 | 0.00 | 0.00 | 2.45 |
1722 | 2515 | 7.786943 | AGGTTCTCTTCATCTAGTATCCAATCA | 59.213 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
1723 | 2516 | 8.087750 | CAGGTTCTCTTCATCTAGTATCCAATC | 58.912 | 40.741 | 0.00 | 0.00 | 0.00 | 2.67 |
1724 | 2517 | 7.566879 | ACAGGTTCTCTTCATCTAGTATCCAAT | 59.433 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
1725 | 2518 | 6.897966 | ACAGGTTCTCTTCATCTAGTATCCAA | 59.102 | 38.462 | 0.00 | 0.00 | 0.00 | 3.53 |
1726 | 2519 | 6.436027 | ACAGGTTCTCTTCATCTAGTATCCA | 58.564 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1727 | 2520 | 6.969993 | ACAGGTTCTCTTCATCTAGTATCC | 57.030 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
1731 | 2524 | 8.261522 | GGATTTTACAGGTTCTCTTCATCTAGT | 58.738 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
1732 | 2525 | 8.482128 | AGGATTTTACAGGTTCTCTTCATCTAG | 58.518 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
1733 | 2526 | 8.260818 | CAGGATTTTACAGGTTCTCTTCATCTA | 58.739 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
1734 | 2527 | 7.108847 | CAGGATTTTACAGGTTCTCTTCATCT | 58.891 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
1735 | 2528 | 6.881602 | ACAGGATTTTACAGGTTCTCTTCATC | 59.118 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
1736 | 2529 | 6.784031 | ACAGGATTTTACAGGTTCTCTTCAT | 58.216 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1737 | 2530 | 6.187727 | ACAGGATTTTACAGGTTCTCTTCA | 57.812 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
1738 | 2531 | 8.794335 | AATACAGGATTTTACAGGTTCTCTTC | 57.206 | 34.615 | 0.00 | 0.00 | 0.00 | 2.87 |
1739 | 2532 | 8.606830 | AGAATACAGGATTTTACAGGTTCTCTT | 58.393 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
1740 | 2533 | 8.152023 | AGAATACAGGATTTTACAGGTTCTCT | 57.848 | 34.615 | 0.00 | 0.00 | 0.00 | 3.10 |
1741 | 2534 | 8.794335 | AAGAATACAGGATTTTACAGGTTCTC | 57.206 | 34.615 | 0.00 | 0.00 | 0.00 | 2.87 |
1742 | 2535 | 9.588096 | AAAAGAATACAGGATTTTACAGGTTCT | 57.412 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
1743 | 2536 | 9.626045 | CAAAAGAATACAGGATTTTACAGGTTC | 57.374 | 33.333 | 0.00 | 0.00 | 0.00 | 3.62 |
1744 | 2537 | 9.143155 | ACAAAAGAATACAGGATTTTACAGGTT | 57.857 | 29.630 | 0.00 | 0.00 | 0.00 | 3.50 |
1745 | 2538 | 8.706322 | ACAAAAGAATACAGGATTTTACAGGT | 57.294 | 30.769 | 0.00 | 0.00 | 0.00 | 4.00 |
1747 | 2540 | 9.755064 | CGTACAAAAGAATACAGGATTTTACAG | 57.245 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
1748 | 2541 | 9.275398 | ACGTACAAAAGAATACAGGATTTTACA | 57.725 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
1749 | 2542 | 9.750882 | GACGTACAAAAGAATACAGGATTTTAC | 57.249 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
1750 | 2543 | 9.715121 | AGACGTACAAAAGAATACAGGATTTTA | 57.285 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
1751 | 2544 | 8.617290 | AGACGTACAAAAGAATACAGGATTTT | 57.383 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
1752 | 2545 | 9.367444 | CTAGACGTACAAAAGAATACAGGATTT | 57.633 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
1753 | 2546 | 7.491696 | GCTAGACGTACAAAAGAATACAGGATT | 59.508 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
1754 | 2547 | 6.979238 | GCTAGACGTACAAAAGAATACAGGAT | 59.021 | 38.462 | 0.00 | 0.00 | 0.00 | 3.24 |
1755 | 2548 | 6.071784 | TGCTAGACGTACAAAAGAATACAGGA | 60.072 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
1756 | 2549 | 6.097356 | TGCTAGACGTACAAAAGAATACAGG | 58.903 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1757 | 2550 | 7.757097 | ATGCTAGACGTACAAAAGAATACAG | 57.243 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
1758 | 2551 | 8.542497 | AAATGCTAGACGTACAAAAGAATACA | 57.458 | 30.769 | 0.00 | 0.00 | 0.00 | 2.29 |
1759 | 2552 | 9.821662 | AAAAATGCTAGACGTACAAAAGAATAC | 57.178 | 29.630 | 0.00 | 0.00 | 0.00 | 1.89 |
1760 | 2553 | 9.820229 | CAAAAATGCTAGACGTACAAAAGAATA | 57.180 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
1761 | 2554 | 7.807907 | CCAAAAATGCTAGACGTACAAAAGAAT | 59.192 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
1762 | 2555 | 7.136119 | CCAAAAATGCTAGACGTACAAAAGAA | 58.864 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
1763 | 2556 | 6.293735 | CCCAAAAATGCTAGACGTACAAAAGA | 60.294 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
1764 | 2557 | 5.856455 | CCCAAAAATGCTAGACGTACAAAAG | 59.144 | 40.000 | 0.00 | 0.00 | 0.00 | 2.27 |
1765 | 2558 | 5.764131 | CCCAAAAATGCTAGACGTACAAAA | 58.236 | 37.500 | 0.00 | 0.00 | 0.00 | 2.44 |
1766 | 2559 | 4.320641 | GCCCAAAAATGCTAGACGTACAAA | 60.321 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
1767 | 2560 | 3.189702 | GCCCAAAAATGCTAGACGTACAA | 59.810 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
1768 | 2561 | 2.745281 | GCCCAAAAATGCTAGACGTACA | 59.255 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
1769 | 2562 | 3.007635 | AGCCCAAAAATGCTAGACGTAC | 58.992 | 45.455 | 0.00 | 0.00 | 35.69 | 3.67 |
1770 | 2563 | 3.343941 | AGCCCAAAAATGCTAGACGTA | 57.656 | 42.857 | 0.00 | 0.00 | 35.69 | 3.57 |
1771 | 2564 | 2.200373 | AGCCCAAAAATGCTAGACGT | 57.800 | 45.000 | 0.00 | 0.00 | 35.69 | 4.34 |
1772 | 2565 | 3.485216 | CGTAAGCCCAAAAATGCTAGACG | 60.485 | 47.826 | 0.00 | 0.00 | 39.26 | 4.18 |
1773 | 2566 | 3.439129 | ACGTAAGCCCAAAAATGCTAGAC | 59.561 | 43.478 | 0.00 | 0.00 | 45.62 | 2.59 |
1774 | 2567 | 3.438781 | CACGTAAGCCCAAAAATGCTAGA | 59.561 | 43.478 | 0.00 | 0.00 | 45.62 | 2.43 |
1775 | 2568 | 3.758300 | CACGTAAGCCCAAAAATGCTAG | 58.242 | 45.455 | 0.00 | 0.00 | 45.62 | 3.42 |
1776 | 2569 | 2.094957 | GCACGTAAGCCCAAAAATGCTA | 60.095 | 45.455 | 0.00 | 0.00 | 45.62 | 3.49 |
1777 | 2570 | 1.336795 | GCACGTAAGCCCAAAAATGCT | 60.337 | 47.619 | 0.00 | 0.00 | 45.62 | 3.79 |
1778 | 2571 | 1.067693 | GCACGTAAGCCCAAAAATGC | 58.932 | 50.000 | 0.00 | 0.00 | 45.62 | 3.56 |
1779 | 2572 | 2.030363 | TCTGCACGTAAGCCCAAAAATG | 60.030 | 45.455 | 0.00 | 0.00 | 45.62 | 2.32 |
1780 | 2573 | 2.235016 | TCTGCACGTAAGCCCAAAAAT | 58.765 | 42.857 | 0.00 | 0.00 | 45.62 | 1.82 |
1781 | 2574 | 1.681538 | TCTGCACGTAAGCCCAAAAA | 58.318 | 45.000 | 0.00 | 0.00 | 45.62 | 1.94 |
1782 | 2575 | 1.681538 | TTCTGCACGTAAGCCCAAAA | 58.318 | 45.000 | 0.00 | 0.00 | 45.62 | 2.44 |
1783 | 2576 | 1.335496 | GTTTCTGCACGTAAGCCCAAA | 59.665 | 47.619 | 0.00 | 0.00 | 45.62 | 3.28 |
1784 | 2577 | 0.948678 | GTTTCTGCACGTAAGCCCAA | 59.051 | 50.000 | 0.00 | 0.00 | 45.62 | 4.12 |
1785 | 2578 | 0.887387 | GGTTTCTGCACGTAAGCCCA | 60.887 | 55.000 | 0.00 | 0.00 | 45.62 | 5.36 |
1786 | 2579 | 0.887387 | TGGTTTCTGCACGTAAGCCC | 60.887 | 55.000 | 0.00 | 0.00 | 45.62 | 5.19 |
1787 | 2580 | 1.165270 | ATGGTTTCTGCACGTAAGCC | 58.835 | 50.000 | 0.00 | 0.00 | 45.62 | 4.35 |
1788 | 2581 | 2.989422 | AATGGTTTCTGCACGTAAGC | 57.011 | 45.000 | 0.00 | 0.00 | 45.62 | 3.09 |
1790 | 2583 | 3.403968 | TGCTAATGGTTTCTGCACGTAA | 58.596 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
1795 | 2588 | 5.336690 | GGAGAAAATGCTAATGGTTTCTGCA | 60.337 | 40.000 | 10.44 | 0.00 | 43.72 | 4.41 |
1799 | 2592 | 6.691508 | AGTTGGAGAAAATGCTAATGGTTTC | 58.308 | 36.000 | 0.00 | 0.00 | 0.00 | 2.78 |
1824 | 2617 | 3.852578 | AGGAATGGGATTTCTGTACTGGT | 59.147 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
1829 | 2622 | 5.221106 | CGTACGTAGGAATGGGATTTCTGTA | 60.221 | 44.000 | 9.66 | 0.00 | 29.03 | 2.74 |
1833 | 2626 | 2.798847 | GCGTACGTAGGAATGGGATTTC | 59.201 | 50.000 | 18.91 | 0.00 | 0.00 | 2.17 |
1834 | 2627 | 2.484241 | GGCGTACGTAGGAATGGGATTT | 60.484 | 50.000 | 18.91 | 0.00 | 0.00 | 2.17 |
1835 | 2628 | 1.069668 | GGCGTACGTAGGAATGGGATT | 59.930 | 52.381 | 18.91 | 0.00 | 0.00 | 3.01 |
1836 | 2629 | 0.677842 | GGCGTACGTAGGAATGGGAT | 59.322 | 55.000 | 18.91 | 0.00 | 0.00 | 3.85 |
1837 | 2630 | 0.396139 | AGGCGTACGTAGGAATGGGA | 60.396 | 55.000 | 18.91 | 0.00 | 0.00 | 4.37 |
1838 | 2631 | 0.462789 | AAGGCGTACGTAGGAATGGG | 59.537 | 55.000 | 18.91 | 0.00 | 0.00 | 4.00 |
1839 | 2632 | 1.407979 | AGAAGGCGTACGTAGGAATGG | 59.592 | 52.381 | 18.91 | 0.00 | 0.00 | 3.16 |
1840 | 2633 | 2.865343 | AGAAGGCGTACGTAGGAATG | 57.135 | 50.000 | 18.91 | 0.00 | 0.00 | 2.67 |
1841 | 2634 | 3.282021 | TGTAGAAGGCGTACGTAGGAAT | 58.718 | 45.455 | 18.91 | 3.36 | 0.00 | 3.01 |
1842 | 2635 | 2.679837 | CTGTAGAAGGCGTACGTAGGAA | 59.320 | 50.000 | 18.91 | 0.00 | 0.00 | 3.36 |
1843 | 2636 | 2.093500 | TCTGTAGAAGGCGTACGTAGGA | 60.093 | 50.000 | 18.91 | 0.12 | 0.00 | 2.94 |
1844 | 2637 | 2.283298 | TCTGTAGAAGGCGTACGTAGG | 58.717 | 52.381 | 17.90 | 10.86 | 0.00 | 3.18 |
1845 | 2638 | 3.937874 | CTTCTGTAGAAGGCGTACGTAG | 58.062 | 50.000 | 17.90 | 3.39 | 45.79 | 3.51 |
1847 | 2640 | 2.915738 | CTTCTGTAGAAGGCGTACGT | 57.084 | 50.000 | 17.90 | 0.00 | 45.79 | 3.57 |
1855 | 2648 | 6.860080 | TGGATACGTAAACCTTCTGTAGAAG | 58.140 | 40.000 | 18.39 | 13.43 | 45.42 | 2.85 |
1856 | 2649 | 6.839124 | TGGATACGTAAACCTTCTGTAGAA | 57.161 | 37.500 | 18.39 | 0.00 | 42.51 | 2.10 |
1857 | 2650 | 8.523915 | TTATGGATACGTAAACCTTCTGTAGA | 57.476 | 34.615 | 18.39 | 2.03 | 44.90 | 2.59 |
1858 | 2651 | 8.627403 | TCTTATGGATACGTAAACCTTCTGTAG | 58.373 | 37.037 | 18.39 | 10.56 | 46.98 | 2.74 |
1859 | 2652 | 8.523915 | TCTTATGGATACGTAAACCTTCTGTA | 57.476 | 34.615 | 18.39 | 3.14 | 46.98 | 2.74 |
1860 | 2653 | 7.414222 | TCTTATGGATACGTAAACCTTCTGT | 57.586 | 36.000 | 18.39 | 6.72 | 46.98 | 3.41 |
1861 | 2654 | 8.765219 | CAATCTTATGGATACGTAAACCTTCTG | 58.235 | 37.037 | 18.39 | 10.99 | 46.98 | 3.02 |
1862 | 2655 | 8.701895 | TCAATCTTATGGATACGTAAACCTTCT | 58.298 | 33.333 | 18.39 | 9.27 | 46.98 | 2.85 |
1863 | 2656 | 8.882415 | TCAATCTTATGGATACGTAAACCTTC | 57.118 | 34.615 | 18.39 | 4.56 | 46.98 | 3.46 |
1864 | 2657 | 7.931948 | CCTCAATCTTATGGATACGTAAACCTT | 59.068 | 37.037 | 18.39 | 15.37 | 46.98 | 3.50 |
1865 | 2658 | 7.070821 | ACCTCAATCTTATGGATACGTAAACCT | 59.929 | 37.037 | 18.39 | 9.83 | 46.98 | 3.50 |
1866 | 2659 | 7.215085 | ACCTCAATCTTATGGATACGTAAACC | 58.785 | 38.462 | 13.11 | 13.11 | 46.98 | 3.27 |
1867 | 2660 | 9.189723 | GTACCTCAATCTTATGGATACGTAAAC | 57.810 | 37.037 | 0.00 | 0.00 | 46.98 | 2.01 |
1868 | 2661 | 9.139734 | AGTACCTCAATCTTATGGATACGTAAA | 57.860 | 33.333 | 0.00 | 0.00 | 46.98 | 2.01 |
1869 | 2662 | 8.701908 | AGTACCTCAATCTTATGGATACGTAA | 57.298 | 34.615 | 0.00 | 0.00 | 45.66 | 3.18 |
1870 | 2663 | 8.701908 | AAGTACCTCAATCTTATGGATACGTA | 57.298 | 34.615 | 0.00 | 0.00 | 42.51 | 3.57 |
1871 | 2664 | 7.287005 | TGAAGTACCTCAATCTTATGGATACGT | 59.713 | 37.037 | 0.00 | 0.00 | 42.51 | 3.57 |
1872 | 2665 | 7.658261 | TGAAGTACCTCAATCTTATGGATACG | 58.342 | 38.462 | 0.00 | 0.00 | 42.51 | 3.06 |
1893 | 2686 | 4.083802 | CCACGCTAAAAGGAAAGTCTGAAG | 60.084 | 45.833 | 0.00 | 0.00 | 0.00 | 3.02 |
1961 | 2755 | 3.243941 | ACTGTACGTGTACTGAAATGCCA | 60.244 | 43.478 | 19.69 | 0.00 | 38.07 | 4.92 |
1963 | 2757 | 4.210537 | ACAACTGTACGTGTACTGAAATGC | 59.789 | 41.667 | 19.69 | 0.00 | 38.07 | 3.56 |
1964 | 2758 | 5.900339 | ACAACTGTACGTGTACTGAAATG | 57.100 | 39.130 | 19.69 | 16.43 | 38.07 | 2.32 |
1967 | 2762 | 5.170021 | ACAAACAACTGTACGTGTACTGAA | 58.830 | 37.500 | 19.69 | 0.00 | 38.07 | 3.02 |
1979 | 2774 | 7.646130 | CGTGGTATTAATTCAACAAACAACTGT | 59.354 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
2457 | 6536 | 0.887836 | TCACAGAAGCAGCAGCAAGG | 60.888 | 55.000 | 3.17 | 0.00 | 45.49 | 3.61 |
2462 | 6541 | 0.803117 | CACCATCACAGAAGCAGCAG | 59.197 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
2629 | 6724 | 4.229096 | CTCACAAATGAAAATGGTGACCG | 58.771 | 43.478 | 0.00 | 0.00 | 34.97 | 4.79 |
2657 | 6752 | 7.358848 | GCATACAATTGGTAAAAAGGAAACACG | 60.359 | 37.037 | 10.83 | 0.00 | 35.14 | 4.49 |
2678 | 6852 | 7.438459 | ACATAGGAAAAAGAGACATACGCATAC | 59.562 | 37.037 | 0.00 | 0.00 | 0.00 | 2.39 |
2710 | 6927 | 5.659440 | TGCCATGTTTCCTTTTTCCTATC | 57.341 | 39.130 | 0.00 | 0.00 | 0.00 | 2.08 |
2722 | 7003 | 5.697633 | ACAGTTTGATTTGATGCCATGTTTC | 59.302 | 36.000 | 0.00 | 0.00 | 0.00 | 2.78 |
2741 | 7022 | 5.940192 | TTGCATACGATTTTCTGACAGTT | 57.060 | 34.783 | 1.59 | 0.00 | 0.00 | 3.16 |
2889 | 7189 | 0.455410 | GGCGCAATTGGTTATCTGCA | 59.545 | 50.000 | 10.83 | 0.00 | 34.39 | 4.41 |
2898 | 7198 | 0.318614 | AAACTCGTTGGCGCAATTGG | 60.319 | 50.000 | 10.83 | 0.00 | 38.14 | 3.16 |
2908 | 7208 | 3.667960 | GCTGCCTAACATCAAACTCGTTG | 60.668 | 47.826 | 0.00 | 0.00 | 38.71 | 4.10 |
3030 | 7641 | 6.384258 | AGCATGTACTACTATCTGTCAGTG | 57.616 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
3034 | 7645 | 6.183360 | TGGTCAAGCATGTACTACTATCTGTC | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
3051 | 7662 | 3.861689 | GCTGCTAAAATCAATGGTCAAGC | 59.138 | 43.478 | 0.00 | 0.00 | 0.00 | 4.01 |
3061 | 7672 | 0.813184 | GCTGGCTGCTGCTAAAATCA | 59.187 | 50.000 | 15.64 | 2.86 | 39.59 | 2.57 |
3127 | 7741 | 0.535102 | ACCAGCGGTTCCTGTTCAAG | 60.535 | 55.000 | 0.00 | 0.00 | 27.29 | 3.02 |
3225 | 7839 | 0.255318 | CATCCCTTGAGGCTTGCTCT | 59.745 | 55.000 | 0.00 | 0.00 | 34.51 | 4.09 |
3437 | 8093 | 1.976474 | GAACAGATTTGCGGGCCCA | 60.976 | 57.895 | 24.92 | 1.02 | 0.00 | 5.36 |
3491 | 8147 | 2.348411 | ACACTAGCTTGGTGCAAGTT | 57.652 | 45.000 | 16.17 | 0.00 | 42.77 | 2.66 |
3558 | 8352 | 3.120060 | GCGTCACTTTCTGCATCAAGATT | 60.120 | 43.478 | 11.10 | 0.00 | 0.00 | 2.40 |
3697 | 8491 | 2.573463 | ACCCCACCTTGGTATCTCAAT | 58.427 | 47.619 | 0.00 | 0.00 | 35.17 | 2.57 |
3729 | 8523 | 3.591527 | TGAGAAGGGTGATAATGGTTGGT | 59.408 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
3926 | 8732 | 1.398390 | GGTCGCCTTTGTTCTATGCAG | 59.602 | 52.381 | 0.00 | 0.00 | 0.00 | 4.41 |
4314 | 9122 | 3.119990 | CCGGACAACATTACACCATGAAC | 60.120 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
4399 | 9212 | 1.211969 | GCTTCACAGCACATGCCTG | 59.788 | 57.895 | 11.29 | 11.29 | 46.49 | 4.85 |
4513 | 9326 | 4.823989 | AGACTGAATGAACAAACTCCCTTG | 59.176 | 41.667 | 0.00 | 0.00 | 0.00 | 3.61 |
4575 | 9388 | 1.972872 | CAAAGTTGAGGCACCAGACT | 58.027 | 50.000 | 0.00 | 0.00 | 33.94 | 3.24 |
4617 | 9430 | 8.721133 | ATAGTATTTCAGGTGGGAAAGTTTTT | 57.279 | 30.769 | 0.00 | 0.00 | 39.88 | 1.94 |
4618 | 9431 | 9.816787 | TTATAGTATTTCAGGTGGGAAAGTTTT | 57.183 | 29.630 | 0.00 | 0.00 | 39.88 | 2.43 |
4619 | 9432 | 9.462606 | CTTATAGTATTTCAGGTGGGAAAGTTT | 57.537 | 33.333 | 0.00 | 0.00 | 39.88 | 2.66 |
4620 | 9433 | 8.053355 | CCTTATAGTATTTCAGGTGGGAAAGTT | 58.947 | 37.037 | 0.00 | 0.00 | 39.88 | 2.66 |
4621 | 9434 | 7.404980 | TCCTTATAGTATTTCAGGTGGGAAAGT | 59.595 | 37.037 | 0.00 | 0.00 | 39.88 | 2.66 |
4622 | 9435 | 7.802117 | TCCTTATAGTATTTCAGGTGGGAAAG | 58.198 | 38.462 | 0.00 | 0.00 | 39.88 | 2.62 |
4623 | 9436 | 7.758820 | TCCTTATAGTATTTCAGGTGGGAAA | 57.241 | 36.000 | 0.00 | 0.00 | 40.72 | 3.13 |
4624 | 9437 | 7.570982 | TCATCCTTATAGTATTTCAGGTGGGAA | 59.429 | 37.037 | 0.00 | 0.00 | 0.00 | 3.97 |
4625 | 9438 | 7.079700 | TCATCCTTATAGTATTTCAGGTGGGA | 58.920 | 38.462 | 0.00 | 0.00 | 0.00 | 4.37 |
4693 | 9517 | 8.207545 | ACTTTCCCAAATGTTTATTGCACTTAA | 58.792 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
4739 | 9563 | 4.631813 | GTGCCATACTAACTCTGTTTCCAG | 59.368 | 45.833 | 0.00 | 0.00 | 40.25 | 3.86 |
4776 | 9600 | 4.082354 | GCTGATTTCTCTGGAAGCAACAAT | 60.082 | 41.667 | 0.00 | 0.00 | 32.61 | 2.71 |
4904 | 9728 | 0.595095 | GGTCTTCTTGTTGCCAGCAG | 59.405 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
4909 | 9734 | 0.312102 | GTGCTGGTCTTCTTGTTGCC | 59.688 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
4910 | 9735 | 0.040958 | CGTGCTGGTCTTCTTGTTGC | 60.041 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
4911 | 9736 | 1.261619 | GACGTGCTGGTCTTCTTGTTG | 59.738 | 52.381 | 0.00 | 0.00 | 34.09 | 3.33 |
4915 | 9740 | 0.753262 | AGTGACGTGCTGGTCTTCTT | 59.247 | 50.000 | 0.00 | 0.00 | 37.81 | 2.52 |
4917 | 9742 | 0.032130 | TGAGTGACGTGCTGGTCTTC | 59.968 | 55.000 | 0.00 | 7.27 | 37.81 | 2.87 |
4921 | 9746 | 0.107897 | TTGTTGAGTGACGTGCTGGT | 60.108 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4956 | 9782 | 1.893062 | CTGCTGGTCGGAGATGTGA | 59.107 | 57.895 | 0.00 | 0.00 | 40.67 | 3.58 |
4957 | 9783 | 1.812922 | GCTGCTGGTCGGAGATGTG | 60.813 | 63.158 | 0.00 | 0.00 | 40.67 | 3.21 |
4976 | 9802 | 0.464036 | TATGGACTGCTTCGGCGATT | 59.536 | 50.000 | 11.76 | 0.00 | 45.37 | 3.34 |
4979 | 9805 | 0.460284 | AGTTATGGACTGCTTCGGCG | 60.460 | 55.000 | 0.00 | 0.00 | 45.37 | 6.46 |
4985 | 9811 | 2.094494 | CGAGTGTGAGTTATGGACTGCT | 60.094 | 50.000 | 0.00 | 0.00 | 39.19 | 4.24 |
4988 | 9814 | 1.893137 | TGCGAGTGTGAGTTATGGACT | 59.107 | 47.619 | 0.00 | 0.00 | 42.70 | 3.85 |
4989 | 9815 | 2.363788 | TGCGAGTGTGAGTTATGGAC | 57.636 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
4996 | 9825 | 0.532862 | CAACCCTTGCGAGTGTGAGT | 60.533 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5016 | 9845 | 2.202932 | GCCCGTGCGATCACTGAT | 60.203 | 61.111 | 0.00 | 0.00 | 40.99 | 2.90 |
5186 | 10015 | 2.358615 | GCGACATGTGGGACAGCA | 60.359 | 61.111 | 1.15 | 0.00 | 41.80 | 4.41 |
5232 | 10061 | 1.077716 | GGGGAACGCAGGCAAGTAT | 60.078 | 57.895 | 0.00 | 0.00 | 42.57 | 2.12 |
5253 | 10082 | 1.654220 | GCACTTCTTTCGGCTGCAA | 59.346 | 52.632 | 0.50 | 0.00 | 0.00 | 4.08 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.