Multiple sequence alignment - TraesCS7D01G388500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G388500 chr7D 100.000 3652 0 0 1 3652 502996843 503000494 0.000000e+00 6745.0
1 TraesCS7D01G388500 chr7D 92.016 977 59 7 2262 3236 503686488 503687447 0.000000e+00 1354.0
2 TraesCS7D01G388500 chr7D 89.130 506 49 5 2745 3248 503146269 503146770 3.100000e-175 625.0
3 TraesCS7D01G388500 chr7D 84.458 637 60 10 2686 3320 503295998 503296597 3.140000e-165 592.0
4 TraesCS7D01G388500 chr7D 89.315 365 33 6 3049 3408 503039485 503039848 1.550000e-123 453.0
5 TraesCS7D01G388500 chr7D 91.241 274 21 3 2082 2354 503089113 503089384 1.600000e-98 370.0
6 TraesCS7D01G388500 chr7D 83.178 321 39 10 2143 2461 503295402 503295709 2.780000e-71 279.0
7 TraesCS7D01G388500 chr7D 84.191 272 30 6 2688 2959 503039007 503039265 6.050000e-63 252.0
8 TraesCS7D01G388500 chr7D 87.791 172 8 5 2515 2686 503038737 503038895 4.810000e-44 189.0
9 TraesCS7D01G388500 chr7D 82.301 226 25 8 2143 2367 503030923 503031134 8.060000e-42 182.0
10 TraesCS7D01G388500 chr7D 86.705 173 8 6 2515 2687 503295717 503295874 1.040000e-40 178.0
11 TraesCS7D01G388500 chr7D 92.105 114 8 1 2355 2468 503038624 503038736 3.770000e-35 159.0
12 TraesCS7D01G388500 chr7A 92.372 2137 92 19 1550 3652 570122118 570124217 0.000000e+00 2977.0
13 TraesCS7D01G388500 chr7A 90.281 854 55 18 712 1549 570121139 570121980 0.000000e+00 1092.0
14 TraesCS7D01G388500 chr7A 90.244 287 16 3 2686 2964 570141390 570141672 7.450000e-97 364.0
15 TraesCS7D01G388500 chr7A 84.424 321 35 8 2143 2462 570140794 570141100 5.930000e-78 302.0
16 TraesCS7D01G388500 chr7A 94.215 121 4 1 2955 3072 570143284 570143404 8.060000e-42 182.0
17 TraesCS7D01G388500 chr7A 85.965 171 12 5 2515 2685 570141106 570141264 4.850000e-39 172.0
18 TraesCS7D01G388500 chr7B 91.972 1744 77 20 1948 3652 531664012 531665731 0.000000e+00 2386.0
19 TraesCS7D01G388500 chr7B 88.598 1070 77 19 503 1549 531662241 531663288 0.000000e+00 1258.0
20 TraesCS7D01G388500 chr7B 90.505 653 54 5 2686 3336 531762594 531763240 0.000000e+00 856.0
21 TraesCS7D01G388500 chr7B 83.183 333 35 13 2143 2468 531761992 531762310 5.970000e-73 285.0
22 TraesCS7D01G388500 chr7B 80.800 375 36 17 1550 1921 531663447 531663788 1.010000e-65 261.0
23 TraesCS7D01G388500 chr7B 85.549 173 12 6 2515 2687 531762311 531762470 6.270000e-38 169.0
24 TraesCS7D01G388500 chr7B 82.569 109 14 5 3456 3563 531777055 531777159 1.400000e-14 91.6
25 TraesCS7D01G388500 chr3D 98.155 542 10 0 2274 2815 141837444 141836903 0.000000e+00 946.0
26 TraesCS7D01G388500 chr3D 98.077 156 3 0 996 1151 141837595 141837440 4.650000e-69 272.0
27 TraesCS7D01G388500 chr3D 95.833 144 5 1 778 921 141837733 141837591 7.890000e-57 231.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G388500 chr7D 502996843 503000494 3651 False 6745.000000 6745 100.000000 1 3652 1 chr7D.!!$F1 3651
1 TraesCS7D01G388500 chr7D 503686488 503687447 959 False 1354.000000 1354 92.016000 2262 3236 1 chr7D.!!$F5 974
2 TraesCS7D01G388500 chr7D 503146269 503146770 501 False 625.000000 625 89.130000 2745 3248 1 chr7D.!!$F4 503
3 TraesCS7D01G388500 chr7D 503295402 503296597 1195 False 349.666667 592 84.780333 2143 3320 3 chr7D.!!$F7 1177
4 TraesCS7D01G388500 chr7D 503038624 503039848 1224 False 263.250000 453 88.350500 2355 3408 4 chr7D.!!$F6 1053
5 TraesCS7D01G388500 chr7A 570121139 570124217 3078 False 2034.500000 2977 91.326500 712 3652 2 chr7A.!!$F1 2940
6 TraesCS7D01G388500 chr7A 570140794 570143404 2610 False 255.000000 364 88.712000 2143 3072 4 chr7A.!!$F2 929
7 TraesCS7D01G388500 chr7B 531662241 531665731 3490 False 1301.666667 2386 87.123333 503 3652 3 chr7B.!!$F2 3149
8 TraesCS7D01G388500 chr7B 531761992 531763240 1248 False 436.666667 856 86.412333 2143 3336 3 chr7B.!!$F3 1193
9 TraesCS7D01G388500 chr3D 141836903 141837733 830 True 483.000000 946 97.355000 778 2815 3 chr3D.!!$R1 2037

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
53 54 0.099968 CGTCTTGCTATCGACGGGAA 59.900 55.0 4.09 0.00 46.61 3.97 F
456 457 0.250513 AATGGCTCGAGTCCAAGACC 59.749 55.0 25.47 12.93 37.13 3.85 F
460 461 0.250513 GCTCGAGTCCAAGACCCAAT 59.749 55.0 15.13 0.00 32.18 3.16 F
1178 1200 0.658897 TCCGGTCGCTTTTTGTTGTC 59.341 50.0 0.00 0.00 0.00 3.18 F
1985 2387 0.323629 CCGGCCAAGAAACCTCAGTA 59.676 55.0 2.24 0.00 0.00 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1876 2081 0.109827 CATGTTGTCATTTGCGCGGA 60.110 50.000 8.83 0.0 31.15 5.54 R
1878 2083 0.730155 AGCATGTTGTCATTTGCGCG 60.730 50.000 0.00 0.0 31.18 6.86 R
1955 2357 1.094785 CTTGGCCGGGTGAACATTAG 58.905 55.000 2.18 0.0 0.00 1.73 R
2141 2550 1.277557 AGTGCAAACTCTAGCTCAGGG 59.722 52.381 0.00 0.0 0.00 4.45 R
3524 5914 1.919240 TAGTCAGCCTTCCGAGACAA 58.081 50.000 0.00 0.0 33.56 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.419760 CGACAGGTATAGAGATTGACGAA 57.580 43.478 0.00 0.00 0.00 3.85
23 24 5.444983 CGACAGGTATAGAGATTGACGAAG 58.555 45.833 0.00 0.00 0.00 3.79
38 39 3.911661 ACGAAGTTACTACAAGCGTCT 57.088 42.857 0.00 0.00 37.78 4.18
39 40 4.234530 ACGAAGTTACTACAAGCGTCTT 57.765 40.909 0.00 0.00 37.78 3.01
40 41 3.979495 ACGAAGTTACTACAAGCGTCTTG 59.021 43.478 15.16 15.16 37.78 3.02
41 42 3.181543 CGAAGTTACTACAAGCGTCTTGC 60.182 47.826 16.24 3.23 46.98 4.01
51 52 4.303853 CGTCTTGCTATCGACGGG 57.696 61.111 4.09 0.00 46.61 5.28
52 53 1.725665 CGTCTTGCTATCGACGGGA 59.274 57.895 4.09 0.00 46.61 5.14
53 54 0.099968 CGTCTTGCTATCGACGGGAA 59.900 55.000 4.09 0.00 46.61 3.97
54 55 1.557651 GTCTTGCTATCGACGGGAAC 58.442 55.000 0.00 0.00 0.00 3.62
67 68 4.796495 GGAACGCCGCCTCCCATT 62.796 66.667 0.00 0.00 0.00 3.16
68 69 3.202706 GAACGCCGCCTCCCATTC 61.203 66.667 0.00 0.00 0.00 2.67
71 72 4.830765 CGCCGCCTCCCATTCGAA 62.831 66.667 0.00 0.00 0.00 3.71
72 73 2.437716 GCCGCCTCCCATTCGAAA 60.438 61.111 0.00 0.00 0.00 3.46
73 74 2.043980 GCCGCCTCCCATTCGAAAA 61.044 57.895 0.00 0.00 0.00 2.29
74 75 1.591504 GCCGCCTCCCATTCGAAAAA 61.592 55.000 0.00 0.00 0.00 1.94
75 76 1.102978 CCGCCTCCCATTCGAAAAAT 58.897 50.000 0.00 0.00 0.00 1.82
76 77 2.294074 CCGCCTCCCATTCGAAAAATA 58.706 47.619 0.00 0.00 0.00 1.40
77 78 2.884639 CCGCCTCCCATTCGAAAAATAT 59.115 45.455 0.00 0.00 0.00 1.28
78 79 3.317993 CCGCCTCCCATTCGAAAAATATT 59.682 43.478 0.00 0.00 0.00 1.28
79 80 4.202111 CCGCCTCCCATTCGAAAAATATTT 60.202 41.667 0.00 0.00 0.00 1.40
80 81 4.976116 CGCCTCCCATTCGAAAAATATTTC 59.024 41.667 0.00 0.00 41.27 2.17
95 96 9.918590 GAAAAATATTTCGCTTTTACGAGAAAC 57.081 29.630 0.10 0.00 44.00 2.78
96 97 8.443898 AAAATATTTCGCTTTTACGAGAAACC 57.556 30.769 0.10 0.00 44.00 3.27
97 98 6.730960 ATATTTCGCTTTTACGAGAAACCA 57.269 33.333 0.00 0.00 44.00 3.67
98 99 4.879104 TTTCGCTTTTACGAGAAACCAA 57.121 36.364 0.00 0.00 44.00 3.67
99 100 4.879104 TTCGCTTTTACGAGAAACCAAA 57.121 36.364 0.00 0.00 44.00 3.28
100 101 4.461992 TCGCTTTTACGAGAAACCAAAG 57.538 40.909 0.00 0.00 37.09 2.77
101 102 2.971261 CGCTTTTACGAGAAACCAAAGC 59.029 45.455 5.10 5.10 43.86 3.51
102 103 2.971261 GCTTTTACGAGAAACCAAAGCG 59.029 45.455 0.00 0.00 39.83 4.68
103 104 3.547413 GCTTTTACGAGAAACCAAAGCGT 60.547 43.478 0.00 0.00 39.83 5.07
104 105 3.865224 TTTACGAGAAACCAAAGCGTC 57.135 42.857 0.00 0.00 36.51 5.19
105 106 2.806608 TACGAGAAACCAAAGCGTCT 57.193 45.000 0.00 0.00 36.51 4.18
106 107 2.806608 ACGAGAAACCAAAGCGTCTA 57.193 45.000 0.00 0.00 0.00 2.59
107 108 3.102052 ACGAGAAACCAAAGCGTCTAA 57.898 42.857 0.00 0.00 0.00 2.10
108 109 3.660865 ACGAGAAACCAAAGCGTCTAAT 58.339 40.909 0.00 0.00 0.00 1.73
109 110 3.678548 ACGAGAAACCAAAGCGTCTAATC 59.321 43.478 0.00 0.00 0.00 1.75
110 111 3.927142 CGAGAAACCAAAGCGTCTAATCT 59.073 43.478 0.00 0.00 0.00 2.40
111 112 4.201628 CGAGAAACCAAAGCGTCTAATCTG 60.202 45.833 0.00 0.00 0.00 2.90
112 113 4.894784 AGAAACCAAAGCGTCTAATCTGA 58.105 39.130 0.00 0.00 0.00 3.27
113 114 4.932200 AGAAACCAAAGCGTCTAATCTGAG 59.068 41.667 0.00 0.00 0.00 3.35
114 115 3.252974 ACCAAAGCGTCTAATCTGAGG 57.747 47.619 0.00 0.00 0.00 3.86
115 116 2.567615 ACCAAAGCGTCTAATCTGAGGT 59.432 45.455 0.00 0.00 0.00 3.85
116 117 3.008049 ACCAAAGCGTCTAATCTGAGGTT 59.992 43.478 0.00 0.00 0.00 3.50
117 118 3.372206 CCAAAGCGTCTAATCTGAGGTTG 59.628 47.826 0.00 0.00 0.00 3.77
118 119 4.245660 CAAAGCGTCTAATCTGAGGTTGA 58.754 43.478 0.00 0.00 0.00 3.18
119 120 4.744795 AAGCGTCTAATCTGAGGTTGAT 57.255 40.909 0.00 0.00 0.00 2.57
120 121 4.314740 AGCGTCTAATCTGAGGTTGATC 57.685 45.455 0.00 0.00 0.00 2.92
121 122 3.068873 AGCGTCTAATCTGAGGTTGATCC 59.931 47.826 0.00 0.00 0.00 3.36
122 123 3.800604 GCGTCTAATCTGAGGTTGATCCC 60.801 52.174 0.00 0.00 36.75 3.85
123 124 3.639094 CGTCTAATCTGAGGTTGATCCCT 59.361 47.826 0.00 0.00 37.62 4.20
124 125 4.500545 CGTCTAATCTGAGGTTGATCCCTG 60.501 50.000 0.00 0.00 34.03 4.45
125 126 3.969976 TCTAATCTGAGGTTGATCCCTGG 59.030 47.826 0.00 0.00 34.03 4.45
126 127 2.277008 ATCTGAGGTTGATCCCTGGT 57.723 50.000 0.00 0.00 34.03 4.00
127 128 1.279496 TCTGAGGTTGATCCCTGGTG 58.721 55.000 0.00 0.00 34.03 4.17
128 129 0.254178 CTGAGGTTGATCCCTGGTGG 59.746 60.000 0.00 0.00 34.03 4.61
137 138 1.163309 TCCCTGGTGGAATGAGGGT 59.837 57.895 0.00 0.00 46.03 4.34
138 139 0.419865 TCCCTGGTGGAATGAGGGTA 59.580 55.000 0.00 0.00 46.03 3.69
139 140 0.546598 CCCTGGTGGAATGAGGGTAC 59.453 60.000 0.00 0.00 41.58 3.34
140 141 0.546598 CCTGGTGGAATGAGGGTACC 59.453 60.000 2.17 2.17 43.28 3.34
141 142 2.183839 CCTGGTGGAATGAGGGTACCA 61.184 57.143 15.35 0.00 45.03 3.25
160 161 8.958119 GGTACCACTGTTATTCTAATCATTGA 57.042 34.615 7.15 0.00 0.00 2.57
161 162 9.391006 GGTACCACTGTTATTCTAATCATTGAA 57.609 33.333 7.15 0.00 0.00 2.69
163 164 8.281212 ACCACTGTTATTCTAATCATTGAACC 57.719 34.615 0.00 0.00 0.00 3.62
164 165 7.888021 ACCACTGTTATTCTAATCATTGAACCA 59.112 33.333 0.00 0.00 0.00 3.67
165 166 8.184192 CCACTGTTATTCTAATCATTGAACCAC 58.816 37.037 0.00 0.00 0.00 4.16
166 167 8.729756 CACTGTTATTCTAATCATTGAACCACA 58.270 33.333 0.00 0.00 0.00 4.17
167 168 8.950210 ACTGTTATTCTAATCATTGAACCACAG 58.050 33.333 14.10 14.10 39.27 3.66
168 169 8.279970 TGTTATTCTAATCATTGAACCACAGG 57.720 34.615 0.00 0.00 0.00 4.00
169 170 7.888021 TGTTATTCTAATCATTGAACCACAGGT 59.112 33.333 0.00 0.00 37.65 4.00
171 172 6.573664 TTCTAATCATTGAACCACAGGTTG 57.426 37.500 6.10 0.00 46.95 3.77
172 173 3.665745 AATCATTGAACCACAGGTTGC 57.334 42.857 6.10 0.00 46.95 4.17
173 174 2.363306 TCATTGAACCACAGGTTGCT 57.637 45.000 6.10 0.00 46.95 3.91
174 175 2.665165 TCATTGAACCACAGGTTGCTT 58.335 42.857 6.10 0.00 46.95 3.91
175 176 3.826524 TCATTGAACCACAGGTTGCTTA 58.173 40.909 6.10 0.00 46.95 3.09
176 177 4.406456 TCATTGAACCACAGGTTGCTTAT 58.594 39.130 6.10 0.00 46.95 1.73
177 178 5.565509 TCATTGAACCACAGGTTGCTTATA 58.434 37.500 6.10 0.00 46.95 0.98
178 179 6.186957 TCATTGAACCACAGGTTGCTTATAT 58.813 36.000 6.10 0.00 46.95 0.86
179 180 7.342581 TCATTGAACCACAGGTTGCTTATATA 58.657 34.615 6.10 0.00 46.95 0.86
180 181 7.998383 TCATTGAACCACAGGTTGCTTATATAT 59.002 33.333 6.10 0.00 46.95 0.86
181 182 7.566760 TTGAACCACAGGTTGCTTATATATG 57.433 36.000 6.10 0.00 46.95 1.78
182 183 6.658849 TGAACCACAGGTTGCTTATATATGT 58.341 36.000 6.10 0.00 46.95 2.29
183 184 7.116075 TGAACCACAGGTTGCTTATATATGTT 58.884 34.615 6.10 0.00 46.95 2.71
184 185 7.613801 TGAACCACAGGTTGCTTATATATGTTT 59.386 33.333 6.10 0.00 46.95 2.83
185 186 7.954666 ACCACAGGTTGCTTATATATGTTTT 57.045 32.000 0.00 0.00 27.29 2.43
186 187 7.996385 ACCACAGGTTGCTTATATATGTTTTC 58.004 34.615 0.00 0.00 27.29 2.29
187 188 7.834181 ACCACAGGTTGCTTATATATGTTTTCT 59.166 33.333 0.00 0.00 27.29 2.52
188 189 8.131100 CCACAGGTTGCTTATATATGTTTTCTG 58.869 37.037 0.00 0.00 0.00 3.02
189 190 8.677300 CACAGGTTGCTTATATATGTTTTCTGT 58.323 33.333 0.00 0.00 0.00 3.41
190 191 9.243105 ACAGGTTGCTTATATATGTTTTCTGTT 57.757 29.630 0.00 0.00 0.00 3.16
191 192 9.722056 CAGGTTGCTTATATATGTTTTCTGTTC 57.278 33.333 0.00 0.00 0.00 3.18
192 193 8.903820 AGGTTGCTTATATATGTTTTCTGTTCC 58.096 33.333 0.00 0.00 0.00 3.62
193 194 8.903820 GGTTGCTTATATATGTTTTCTGTTCCT 58.096 33.333 0.00 0.00 0.00 3.36
194 195 9.937175 GTTGCTTATATATGTTTTCTGTTCCTC 57.063 33.333 0.00 0.00 0.00 3.71
195 196 9.905713 TTGCTTATATATGTTTTCTGTTCCTCT 57.094 29.630 0.00 0.00 0.00 3.69
203 204 6.937436 TGTTTTCTGTTCCTCTAGTTTTCC 57.063 37.500 0.00 0.00 0.00 3.13
204 205 6.659824 TGTTTTCTGTTCCTCTAGTTTTCCT 58.340 36.000 0.00 0.00 0.00 3.36
205 206 7.798071 TGTTTTCTGTTCCTCTAGTTTTCCTA 58.202 34.615 0.00 0.00 0.00 2.94
206 207 8.437575 TGTTTTCTGTTCCTCTAGTTTTCCTAT 58.562 33.333 0.00 0.00 0.00 2.57
207 208 9.286170 GTTTTCTGTTCCTCTAGTTTTCCTATT 57.714 33.333 0.00 0.00 0.00 1.73
208 209 9.503399 TTTTCTGTTCCTCTAGTTTTCCTATTC 57.497 33.333 0.00 0.00 0.00 1.75
209 210 7.184067 TCTGTTCCTCTAGTTTTCCTATTCC 57.816 40.000 0.00 0.00 0.00 3.01
210 211 6.960542 TCTGTTCCTCTAGTTTTCCTATTCCT 59.039 38.462 0.00 0.00 0.00 3.36
211 212 7.458170 TCTGTTCCTCTAGTTTTCCTATTCCTT 59.542 37.037 0.00 0.00 0.00 3.36
212 213 7.621796 TGTTCCTCTAGTTTTCCTATTCCTTC 58.378 38.462 0.00 0.00 0.00 3.46
213 214 6.809976 TCCTCTAGTTTTCCTATTCCTTCC 57.190 41.667 0.00 0.00 0.00 3.46
214 215 6.513033 TCCTCTAGTTTTCCTATTCCTTCCT 58.487 40.000 0.00 0.00 0.00 3.36
215 216 7.659214 TCCTCTAGTTTTCCTATTCCTTCCTA 58.341 38.462 0.00 0.00 0.00 2.94
216 217 8.127038 TCCTCTAGTTTTCCTATTCCTTCCTAA 58.873 37.037 0.00 0.00 0.00 2.69
217 218 8.205512 CCTCTAGTTTTCCTATTCCTTCCTAAC 58.794 40.741 0.00 0.00 0.00 2.34
218 219 8.674925 TCTAGTTTTCCTATTCCTTCCTAACA 57.325 34.615 0.00 0.00 0.00 2.41
219 220 9.280456 TCTAGTTTTCCTATTCCTTCCTAACAT 57.720 33.333 0.00 0.00 0.00 2.71
220 221 9.907229 CTAGTTTTCCTATTCCTTCCTAACATT 57.093 33.333 0.00 0.00 0.00 2.71
224 225 9.640952 TTTTCCTATTCCTTCCTAACATTATGG 57.359 33.333 0.00 0.00 0.00 2.74
225 226 7.329746 TCCTATTCCTTCCTAACATTATGGG 57.670 40.000 0.00 0.00 0.00 4.00
226 227 6.855061 TCCTATTCCTTCCTAACATTATGGGT 59.145 38.462 0.00 0.00 0.00 4.51
227 228 6.942576 CCTATTCCTTCCTAACATTATGGGTG 59.057 42.308 0.00 0.00 0.00 4.61
228 229 5.789574 TTCCTTCCTAACATTATGGGTGT 57.210 39.130 0.00 0.00 0.00 4.16
229 230 5.789574 TCCTTCCTAACATTATGGGTGTT 57.210 39.130 0.00 0.00 42.12 3.32
230 231 6.147437 TCCTTCCTAACATTATGGGTGTTT 57.853 37.500 0.00 0.00 40.13 2.83
231 232 5.949354 TCCTTCCTAACATTATGGGTGTTTG 59.051 40.000 0.00 0.00 40.13 2.93
232 233 5.714806 CCTTCCTAACATTATGGGTGTTTGT 59.285 40.000 0.00 0.00 40.13 2.83
233 234 6.210584 CCTTCCTAACATTATGGGTGTTTGTT 59.789 38.462 0.00 0.00 40.13 2.83
234 235 7.256154 CCTTCCTAACATTATGGGTGTTTGTTT 60.256 37.037 0.00 0.00 40.13 2.83
235 236 7.604657 TCCTAACATTATGGGTGTTTGTTTT 57.395 32.000 0.00 0.00 40.13 2.43
236 237 7.437748 TCCTAACATTATGGGTGTTTGTTTTG 58.562 34.615 0.00 0.00 40.13 2.44
237 238 7.287927 TCCTAACATTATGGGTGTTTGTTTTGA 59.712 33.333 0.00 0.00 40.13 2.69
238 239 7.928706 CCTAACATTATGGGTGTTTGTTTTGAA 59.071 33.333 0.00 0.00 40.13 2.69
239 240 9.319143 CTAACATTATGGGTGTTTGTTTTGAAA 57.681 29.630 0.00 0.00 40.13 2.69
240 241 8.567285 AACATTATGGGTGTTTGTTTTGAAAA 57.433 26.923 0.00 0.00 36.44 2.29
241 242 8.567285 ACATTATGGGTGTTTGTTTTGAAAAA 57.433 26.923 0.00 0.00 0.00 1.94
242 243 9.183368 ACATTATGGGTGTTTGTTTTGAAAAAT 57.817 25.926 0.00 0.00 0.00 1.82
243 244 9.448294 CATTATGGGTGTTTGTTTTGAAAAATG 57.552 29.630 0.00 0.00 0.00 2.32
244 245 8.792830 TTATGGGTGTTTGTTTTGAAAAATGA 57.207 26.923 0.00 0.00 0.00 2.57
245 246 7.878547 ATGGGTGTTTGTTTTGAAAAATGAT 57.121 28.000 0.00 0.00 0.00 2.45
246 247 7.081526 TGGGTGTTTGTTTTGAAAAATGATG 57.918 32.000 0.00 0.00 0.00 3.07
247 248 6.094603 TGGGTGTTTGTTTTGAAAAATGATGG 59.905 34.615 0.00 0.00 0.00 3.51
248 249 6.459435 GGGTGTTTGTTTTGAAAAATGATGGG 60.459 38.462 0.00 0.00 0.00 4.00
249 250 6.094742 GGTGTTTGTTTTGAAAAATGATGGGT 59.905 34.615 0.00 0.00 0.00 4.51
250 251 6.966066 GTGTTTGTTTTGAAAAATGATGGGTG 59.034 34.615 0.00 0.00 0.00 4.61
251 252 6.094603 TGTTTGTTTTGAAAAATGATGGGTGG 59.905 34.615 0.00 0.00 0.00 4.61
252 253 4.712476 TGTTTTGAAAAATGATGGGTGGG 58.288 39.130 0.00 0.00 0.00 4.61
253 254 4.071423 GTTTTGAAAAATGATGGGTGGGG 58.929 43.478 0.00 0.00 0.00 4.96
254 255 2.711895 TGAAAAATGATGGGTGGGGT 57.288 45.000 0.00 0.00 0.00 4.95
255 256 2.983296 TGAAAAATGATGGGTGGGGTT 58.017 42.857 0.00 0.00 0.00 4.11
256 257 2.636893 TGAAAAATGATGGGTGGGGTTG 59.363 45.455 0.00 0.00 0.00 3.77
257 258 1.655372 AAAATGATGGGTGGGGTTGG 58.345 50.000 0.00 0.00 0.00 3.77
258 259 0.909133 AAATGATGGGTGGGGTTGGC 60.909 55.000 0.00 0.00 0.00 4.52
259 260 2.104359 AATGATGGGTGGGGTTGGCA 62.104 55.000 0.00 0.00 0.00 4.92
260 261 1.889010 ATGATGGGTGGGGTTGGCAT 61.889 55.000 0.00 0.00 0.00 4.40
261 262 2.039299 ATGGGTGGGGTTGGCATG 59.961 61.111 0.00 0.00 0.00 4.06
262 263 3.622238 ATGGGTGGGGTTGGCATGG 62.622 63.158 0.00 0.00 0.00 3.66
265 266 3.991318 GTGGGGTTGGCATGGGGA 61.991 66.667 0.00 0.00 0.00 4.81
266 267 3.196385 TGGGGTTGGCATGGGGAA 61.196 61.111 0.00 0.00 0.00 3.97
267 268 2.364186 GGGGTTGGCATGGGGAAG 60.364 66.667 0.00 0.00 0.00 3.46
268 269 2.445155 GGGTTGGCATGGGGAAGT 59.555 61.111 0.00 0.00 0.00 3.01
269 270 1.694856 GGGTTGGCATGGGGAAGTA 59.305 57.895 0.00 0.00 0.00 2.24
270 271 0.261696 GGGTTGGCATGGGGAAGTAT 59.738 55.000 0.00 0.00 0.00 2.12
271 272 1.692411 GGTTGGCATGGGGAAGTATC 58.308 55.000 0.00 0.00 0.00 2.24
272 273 1.215423 GGTTGGCATGGGGAAGTATCT 59.785 52.381 0.00 0.00 0.00 1.98
273 274 2.301346 GTTGGCATGGGGAAGTATCTG 58.699 52.381 0.00 0.00 0.00 2.90
274 275 0.846015 TGGCATGGGGAAGTATCTGG 59.154 55.000 0.00 0.00 0.00 3.86
275 276 0.846693 GGCATGGGGAAGTATCTGGT 59.153 55.000 0.00 0.00 0.00 4.00
276 277 1.477558 GGCATGGGGAAGTATCTGGTG 60.478 57.143 0.00 0.00 0.00 4.17
277 278 1.490490 GCATGGGGAAGTATCTGGTGA 59.510 52.381 0.00 0.00 0.00 4.02
278 279 2.107204 GCATGGGGAAGTATCTGGTGAT 59.893 50.000 0.00 0.00 36.74 3.06
279 280 3.327757 GCATGGGGAAGTATCTGGTGATA 59.672 47.826 0.00 0.00 34.32 2.15
289 290 4.872664 GTATCTGGTGATACTAGTGCACC 58.127 47.826 28.97 28.97 46.96 5.01
293 294 3.444703 GGTGATACTAGTGCACCTGAG 57.555 52.381 28.64 11.25 46.56 3.35
294 295 2.761208 GGTGATACTAGTGCACCTGAGT 59.239 50.000 28.64 16.55 46.56 3.41
295 296 3.195825 GGTGATACTAGTGCACCTGAGTT 59.804 47.826 28.64 5.99 46.56 3.01
296 297 4.401519 GGTGATACTAGTGCACCTGAGTTA 59.598 45.833 28.64 0.00 46.56 2.24
297 298 5.105473 GGTGATACTAGTGCACCTGAGTTAA 60.105 44.000 28.64 1.33 46.56 2.01
298 299 6.395629 GTGATACTAGTGCACCTGAGTTAAA 58.604 40.000 14.63 0.61 0.00 1.52
299 300 7.042335 GTGATACTAGTGCACCTGAGTTAAAT 58.958 38.462 14.63 5.52 0.00 1.40
300 301 7.549488 GTGATACTAGTGCACCTGAGTTAAATT 59.451 37.037 14.63 0.00 0.00 1.82
301 302 8.755028 TGATACTAGTGCACCTGAGTTAAATTA 58.245 33.333 14.63 0.00 0.00 1.40
302 303 9.765795 GATACTAGTGCACCTGAGTTAAATTAT 57.234 33.333 14.63 4.14 0.00 1.28
303 304 9.765795 ATACTAGTGCACCTGAGTTAAATTATC 57.234 33.333 14.63 0.00 0.00 1.75
304 305 7.048512 ACTAGTGCACCTGAGTTAAATTATCC 58.951 38.462 14.63 0.00 0.00 2.59
305 306 6.067217 AGTGCACCTGAGTTAAATTATCCT 57.933 37.500 14.63 0.00 0.00 3.24
306 307 7.195374 AGTGCACCTGAGTTAAATTATCCTA 57.805 36.000 14.63 0.00 0.00 2.94
307 308 7.806180 AGTGCACCTGAGTTAAATTATCCTAT 58.194 34.615 14.63 0.00 0.00 2.57
308 309 8.275040 AGTGCACCTGAGTTAAATTATCCTATT 58.725 33.333 14.63 0.00 0.00 1.73
309 310 8.903820 GTGCACCTGAGTTAAATTATCCTATTT 58.096 33.333 5.22 0.00 0.00 1.40
407 408 9.840427 AAATCCAAATTTGAAACATAGTACGAG 57.160 29.630 19.86 0.00 33.78 4.18
408 409 8.786826 ATCCAAATTTGAAACATAGTACGAGA 57.213 30.769 19.86 3.39 0.00 4.04
409 410 8.610248 TCCAAATTTGAAACATAGTACGAGAA 57.390 30.769 19.86 0.00 0.00 2.87
410 411 9.058174 TCCAAATTTGAAACATAGTACGAGAAA 57.942 29.630 19.86 0.00 0.00 2.52
411 412 9.113876 CCAAATTTGAAACATAGTACGAGAAAC 57.886 33.333 19.86 0.00 0.00 2.78
412 413 9.658475 CAAATTTGAAACATAGTACGAGAAACA 57.342 29.630 13.08 0.00 0.00 2.83
414 415 9.878599 AATTTGAAACATAGTACGAGAAACAAG 57.121 29.630 0.00 0.00 0.00 3.16
415 416 8.651391 TTTGAAACATAGTACGAGAAACAAGA 57.349 30.769 0.00 0.00 0.00 3.02
416 417 8.651391 TTGAAACATAGTACGAGAAACAAGAA 57.349 30.769 0.00 0.00 0.00 2.52
417 418 8.827177 TGAAACATAGTACGAGAAACAAGAAT 57.173 30.769 0.00 0.00 0.00 2.40
418 419 9.268268 TGAAACATAGTACGAGAAACAAGAATT 57.732 29.630 0.00 0.00 0.00 2.17
422 423 9.268268 ACATAGTACGAGAAACAAGAATTTTCA 57.732 29.630 0.00 0.00 35.72 2.69
445 446 9.734620 TTCATTTATGATAAAGAAAATGGCTCG 57.265 29.630 3.83 0.00 38.97 5.03
446 447 9.119418 TCATTTATGATAAAGAAAATGGCTCGA 57.881 29.630 3.83 0.00 38.97 4.04
447 448 9.390795 CATTTATGATAAAGAAAATGGCTCGAG 57.609 33.333 8.45 8.45 36.26 4.04
448 449 8.506168 TTTATGATAAAGAAAATGGCTCGAGT 57.494 30.769 15.13 0.00 0.00 4.18
449 450 6.610741 ATGATAAAGAAAATGGCTCGAGTC 57.389 37.500 10.89 10.89 0.00 3.36
450 451 4.876107 TGATAAAGAAAATGGCTCGAGTCC 59.124 41.667 15.72 16.01 0.00 3.85
451 452 2.859165 AAGAAAATGGCTCGAGTCCA 57.141 45.000 24.41 24.41 38.09 4.02
452 453 2.859165 AGAAAATGGCTCGAGTCCAA 57.141 45.000 25.47 6.12 37.13 3.53
453 454 2.704572 AGAAAATGGCTCGAGTCCAAG 58.295 47.619 25.47 0.00 37.13 3.61
454 455 2.303022 AGAAAATGGCTCGAGTCCAAGA 59.697 45.455 25.47 5.05 37.13 3.02
455 456 2.100605 AAATGGCTCGAGTCCAAGAC 57.899 50.000 25.47 4.33 37.13 3.01
456 457 0.250513 AATGGCTCGAGTCCAAGACC 59.749 55.000 25.47 12.93 37.13 3.85
457 458 1.617947 ATGGCTCGAGTCCAAGACCC 61.618 60.000 25.47 12.29 37.13 4.46
458 459 2.283529 GGCTCGAGTCCAAGACCCA 61.284 63.158 15.13 0.00 32.18 4.51
459 460 1.671742 GCTCGAGTCCAAGACCCAA 59.328 57.895 15.13 0.00 32.18 4.12
460 461 0.250513 GCTCGAGTCCAAGACCCAAT 59.749 55.000 15.13 0.00 32.18 3.16
461 462 1.339151 GCTCGAGTCCAAGACCCAATT 60.339 52.381 15.13 0.00 32.18 2.32
462 463 2.876079 GCTCGAGTCCAAGACCCAATTT 60.876 50.000 15.13 0.00 32.18 1.82
463 464 2.744202 CTCGAGTCCAAGACCCAATTTG 59.256 50.000 3.62 0.00 32.18 2.32
464 465 2.105821 TCGAGTCCAAGACCCAATTTGT 59.894 45.455 0.00 0.00 32.18 2.83
465 466 3.325425 TCGAGTCCAAGACCCAATTTGTA 59.675 43.478 0.00 0.00 32.18 2.41
466 467 4.069304 CGAGTCCAAGACCCAATTTGTAA 58.931 43.478 0.00 0.00 32.18 2.41
467 468 4.083484 CGAGTCCAAGACCCAATTTGTAAC 60.083 45.833 0.00 0.00 32.18 2.50
468 469 4.798882 AGTCCAAGACCCAATTTGTAACA 58.201 39.130 0.00 0.00 32.18 2.41
469 470 4.583073 AGTCCAAGACCCAATTTGTAACAC 59.417 41.667 0.00 0.00 32.18 3.32
470 471 4.583073 GTCCAAGACCCAATTTGTAACACT 59.417 41.667 0.00 0.00 0.00 3.55
471 472 4.825085 TCCAAGACCCAATTTGTAACACTC 59.175 41.667 0.00 0.00 0.00 3.51
472 473 4.022329 CCAAGACCCAATTTGTAACACTCC 60.022 45.833 0.00 0.00 0.00 3.85
473 474 3.763057 AGACCCAATTTGTAACACTCCC 58.237 45.455 0.00 0.00 0.00 4.30
474 475 3.397955 AGACCCAATTTGTAACACTCCCT 59.602 43.478 0.00 0.00 0.00 4.20
475 476 3.756963 GACCCAATTTGTAACACTCCCTC 59.243 47.826 0.00 0.00 0.00 4.30
476 477 3.089284 CCCAATTTGTAACACTCCCTCC 58.911 50.000 0.00 0.00 0.00 4.30
477 478 3.245264 CCCAATTTGTAACACTCCCTCCT 60.245 47.826 0.00 0.00 0.00 3.69
478 479 4.018779 CCCAATTTGTAACACTCCCTCCTA 60.019 45.833 0.00 0.00 0.00 2.94
479 480 5.340027 CCCAATTTGTAACACTCCCTCCTAT 60.340 44.000 0.00 0.00 0.00 2.57
480 481 5.823045 CCAATTTGTAACACTCCCTCCTATC 59.177 44.000 0.00 0.00 0.00 2.08
481 482 6.353082 CCAATTTGTAACACTCCCTCCTATCT 60.353 42.308 0.00 0.00 0.00 1.98
482 483 7.147549 CCAATTTGTAACACTCCCTCCTATCTA 60.148 40.741 0.00 0.00 0.00 1.98
483 484 8.432805 CAATTTGTAACACTCCCTCCTATCTAT 58.567 37.037 0.00 0.00 0.00 1.98
484 485 9.670442 AATTTGTAACACTCCCTCCTATCTATA 57.330 33.333 0.00 0.00 0.00 1.31
485 486 9.845214 ATTTGTAACACTCCCTCCTATCTATAT 57.155 33.333 0.00 0.00 0.00 0.86
486 487 9.670442 TTTGTAACACTCCCTCCTATCTATATT 57.330 33.333 0.00 0.00 0.00 1.28
492 493 9.845214 ACACTCCCTCCTATCTATATTAATTGT 57.155 33.333 0.00 0.00 0.00 2.71
496 497 9.268282 TCCCTCCTATCTATATTAATTGTCACC 57.732 37.037 0.00 0.00 0.00 4.02
497 498 8.198109 CCCTCCTATCTATATTAATTGTCACCG 58.802 40.741 0.00 0.00 0.00 4.94
498 499 8.967918 CCTCCTATCTATATTAATTGTCACCGA 58.032 37.037 0.00 0.00 0.00 4.69
505 506 9.489084 TCTATATTAATTGTCACCGATTTGGAG 57.511 33.333 0.00 0.00 42.00 3.86
506 507 9.273016 CTATATTAATTGTCACCGATTTGGAGT 57.727 33.333 0.00 0.00 42.00 3.85
508 509 9.793259 ATATTAATTGTCACCGATTTGGAGTAT 57.207 29.630 0.00 0.00 42.00 2.12
593 594 5.591067 TGGACCTAAAATTTTATACCAGCGG 59.409 40.000 18.38 13.72 0.00 5.52
595 596 4.035909 ACCTAAAATTTTATACCAGCGGCG 59.964 41.667 10.97 0.51 0.00 6.46
597 598 3.414549 AAATTTTATACCAGCGGCGTG 57.585 42.857 9.37 5.60 0.00 5.34
599 600 1.810959 TTTTATACCAGCGGCGTGTT 58.189 45.000 9.37 0.00 0.00 3.32
607 608 1.486439 CAGCGGCGTGTTTGAAAATT 58.514 45.000 9.37 0.00 0.00 1.82
622 623 7.066766 TGTTTGAAAATTGGGTCATTTTGAAGG 59.933 33.333 0.00 0.00 30.96 3.46
623 624 5.619220 TGAAAATTGGGTCATTTTGAAGGG 58.381 37.500 0.00 0.00 30.96 3.95
624 625 5.367937 TGAAAATTGGGTCATTTTGAAGGGA 59.632 36.000 0.00 0.00 30.96 4.20
625 626 5.903198 AAATTGGGTCATTTTGAAGGGAA 57.097 34.783 0.00 0.00 0.00 3.97
626 627 5.903198 AATTGGGTCATTTTGAAGGGAAA 57.097 34.783 0.00 0.00 0.00 3.13
627 628 5.903198 ATTGGGTCATTTTGAAGGGAAAA 57.097 34.783 0.00 0.00 0.00 2.29
628 629 5.700402 TTGGGTCATTTTGAAGGGAAAAA 57.300 34.783 0.00 0.00 0.00 1.94
629 630 5.029807 TGGGTCATTTTGAAGGGAAAAAC 57.970 39.130 0.00 0.00 29.78 2.43
630 631 4.141597 TGGGTCATTTTGAAGGGAAAAACC 60.142 41.667 0.00 0.00 38.08 3.27
688 689 3.267483 CATTTTGTGGGTCGGTACCTAG 58.733 50.000 10.90 0.00 45.95 3.02
878 899 3.771160 CGAGACCTCCAACCCCCG 61.771 72.222 0.00 0.00 0.00 5.73
1160 1182 3.376546 CCAGCAAAAGGTGAGAGCTATTC 59.623 47.826 0.00 0.00 33.59 1.75
1176 1198 2.415697 ATTCCGGTCGCTTTTTGTTG 57.584 45.000 0.00 0.00 0.00 3.33
1177 1199 1.096416 TTCCGGTCGCTTTTTGTTGT 58.904 45.000 0.00 0.00 0.00 3.32
1178 1200 0.658897 TCCGGTCGCTTTTTGTTGTC 59.341 50.000 0.00 0.00 0.00 3.18
1182 1204 2.277834 CGGTCGCTTTTTGTTGTCAAAC 59.722 45.455 0.00 0.00 42.28 2.93
1213 1235 1.594862 GCGCGCTCATTAGAGTTGATT 59.405 47.619 26.67 0.00 44.00 2.57
1248 1275 7.765360 CGACCCTTGTTATACTAAATTGGTGTA 59.235 37.037 0.00 0.00 0.00 2.90
1284 1311 7.933577 TGTATATTTGTCCAATGGCTCTAAGAG 59.066 37.037 0.00 0.00 0.00 2.85
1372 1406 1.553704 ACAGCGTTAGTTCTTAGGGGG 59.446 52.381 0.00 0.00 0.00 5.40
1375 1409 1.551883 GCGTTAGTTCTTAGGGGGTCA 59.448 52.381 0.00 0.00 0.00 4.02
1376 1410 2.169978 GCGTTAGTTCTTAGGGGGTCAT 59.830 50.000 0.00 0.00 0.00 3.06
1391 1425 4.225042 GGGGGTCATTATTTTGCCTTCTTT 59.775 41.667 0.00 0.00 0.00 2.52
1409 1443 7.760131 CTTCTTTGAGAAGCAACAATTTTGA 57.240 32.000 4.90 0.00 44.35 2.69
1442 1477 8.477419 AATTCACCAAAAGTCCAAGAGAATTA 57.523 30.769 0.00 0.00 33.07 1.40
1483 1518 6.850263 TGGTATTGGGGGTAATAATTCTGA 57.150 37.500 0.00 0.00 0.00 3.27
1498 1533 5.705609 AATTCTGAACGCACCTAACAAAT 57.294 34.783 0.00 0.00 0.00 2.32
1581 1779 5.414454 TGTGGAGTTATTGTGTTTATCCTGC 59.586 40.000 0.00 0.00 0.00 4.85
1582 1780 5.414454 GTGGAGTTATTGTGTTTATCCTGCA 59.586 40.000 0.00 0.00 0.00 4.41
1635 1833 7.512130 ACTTGAGATTTGATATGCAGATACCA 58.488 34.615 0.00 0.00 0.00 3.25
1646 1844 5.886960 ATGCAGATACCACTTTTCTTGTC 57.113 39.130 0.00 0.00 0.00 3.18
1685 1883 5.013183 ACAGAGGAATAGCTTAGGTTGTGTT 59.987 40.000 0.00 0.00 0.00 3.32
1692 1890 4.853924 AGCTTAGGTTGTGTTGGAAATG 57.146 40.909 0.00 0.00 0.00 2.32
1701 1899 7.433680 AGGTTGTGTTGGAAATGATAGTTTTC 58.566 34.615 0.00 0.00 33.31 2.29
1704 1903 9.313118 GTTGTGTTGGAAATGATAGTTTTCTTT 57.687 29.630 0.00 0.00 34.29 2.52
1719 1918 7.823745 AGTTTTCTTTCACACTTGGACATAT 57.176 32.000 0.00 0.00 0.00 1.78
1734 1933 5.614308 TGGACATATGCTAACTGATTCTGG 58.386 41.667 1.58 0.00 0.00 3.86
1735 1934 4.453819 GGACATATGCTAACTGATTCTGGC 59.546 45.833 1.58 0.00 0.00 4.85
1757 1956 1.203262 AGCCTGGACTGGTTACCACTA 60.203 52.381 0.00 0.00 32.44 2.74
1780 1979 1.995376 CCTGTTTTACTGGCCAAGGT 58.005 50.000 7.01 4.58 30.42 3.50
1788 1987 2.736670 ACTGGCCAAGGTCAATATCC 57.263 50.000 7.01 0.00 0.00 2.59
1791 1990 1.140852 TGGCCAAGGTCAATATCCGAG 59.859 52.381 0.61 0.00 0.00 4.63
1792 1991 1.230324 GCCAAGGTCAATATCCGAGC 58.770 55.000 0.00 0.00 0.00 5.03
1807 2006 9.599322 CAATATCCGAGCATTGTTTATTCTTAC 57.401 33.333 0.00 0.00 0.00 2.34
1819 2018 5.355071 TGTTTATTCTTACGCGAGGAGAGTA 59.645 40.000 15.93 10.80 33.96 2.59
1826 2025 5.408909 TCTTACGCGAGGAGAGTAATATCTG 59.591 44.000 15.93 0.00 42.63 2.90
1837 2036 8.874156 AGGAGAGTAATATCTGATTAACATGCA 58.126 33.333 0.00 0.00 0.00 3.96
1866 2065 8.970859 TTTCACAATATGTTTTGGGTTCATTT 57.029 26.923 0.00 0.00 31.75 2.32
1879 2084 9.593134 TTTTGGGTTCATTTAATGATAAATCCG 57.407 29.630 8.56 0.00 39.21 4.18
1880 2085 6.744112 TGGGTTCATTTAATGATAAATCCGC 58.256 36.000 8.56 2.98 39.21 5.54
1888 2093 4.566545 AATGATAAATCCGCGCAAATGA 57.433 36.364 8.75 0.00 0.00 2.57
1941 2146 8.715191 AAGATACAATTTGTTTCTTGCAACAA 57.285 26.923 25.02 0.00 43.57 2.83
1970 2372 1.828979 TTTCCTAATGTTCACCCGGC 58.171 50.000 0.00 0.00 0.00 6.13
1985 2387 0.323629 CCGGCCAAGAAACCTCAGTA 59.676 55.000 2.24 0.00 0.00 2.74
1990 2392 3.127030 GGCCAAGAAACCTCAGTATTTCG 59.873 47.826 0.00 0.00 39.36 3.46
1995 2397 7.361799 GCCAAGAAACCTCAGTATTTCGTAAAT 60.362 37.037 0.00 0.00 39.36 1.40
1999 2401 8.311836 AGAAACCTCAGTATTTCGTAAATCTGA 58.688 33.333 10.14 10.14 39.36 3.27
2001 2403 8.649973 AACCTCAGTATTTCGTAAATCTGATC 57.350 34.615 10.69 0.00 35.98 2.92
2021 2423 8.248253 TCTGATCGCTTCAAGTTGTATACTTAA 58.752 33.333 4.17 0.00 45.29 1.85
2068 2476 3.572682 TGCCACACCTTCTCTATATACCG 59.427 47.826 0.00 0.00 0.00 4.02
2074 2482 6.208797 CACACCTTCTCTATATACCGATGGAA 59.791 42.308 12.10 0.00 0.00 3.53
2083 2491 8.074613 TCTATATACCGATGGAATAAACCAGG 57.925 38.462 0.00 0.00 43.49 4.45
2096 2504 6.435292 AATAAACCAGGAACTAGTGTCAGT 57.565 37.500 0.00 0.00 36.02 3.41
2112 2521 7.563888 AGTGTCAGTAAAAAGGTTTAAGTCC 57.436 36.000 0.00 0.00 31.02 3.85
2119 2528 8.463607 CAGTAAAAAGGTTTAAGTCCTGTTTCA 58.536 33.333 15.61 5.54 40.44 2.69
2123 2532 5.367945 AGGTTTAAGTCCTGTTTCAGTCA 57.632 39.130 1.28 0.00 33.62 3.41
2128 2537 7.355778 GTTTAAGTCCTGTTTCAGTCATCAAG 58.644 38.462 0.00 0.00 0.00 3.02
2133 2542 3.567164 CCTGTTTCAGTCATCAAGCACTT 59.433 43.478 0.00 0.00 0.00 3.16
2257 2676 9.765795 ATAGAGTTGCATATTTGTACTCTTACC 57.234 33.333 17.54 0.00 40.74 2.85
2583 3027 4.642885 CCTCTAGTGACCACTTAGAGAAGG 59.357 50.000 23.08 14.13 42.54 3.46
2704 3276 4.022935 TGTCTATTTTGTTTCTGCCTGCTG 60.023 41.667 0.00 0.00 0.00 4.41
2705 3277 4.022849 GTCTATTTTGTTTCTGCCTGCTGT 60.023 41.667 0.00 0.00 0.00 4.40
2825 3409 3.928992 TGATTTTAGCTCTCTGAACAGCG 59.071 43.478 0.00 0.00 40.84 5.18
2829 3413 0.965439 AGCTCTCTGAACAGCGTCTT 59.035 50.000 0.00 0.00 40.84 3.01
3476 5865 6.127897 GGCAATGTATCATAGCCATTCTTACC 60.128 42.308 0.00 0.00 44.59 2.85
3491 5881 3.959293 TCTTACCGGTGAGATCTGTGTA 58.041 45.455 24.12 0.38 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 7.932335 AGTAACTTCGTCAATCTCTATACCTG 58.068 38.462 0.00 0.00 0.00 4.00
4 5 9.054922 GTAGTAACTTCGTCAATCTCTATACCT 57.945 37.037 0.00 0.00 0.00 3.08
5 6 8.834465 TGTAGTAACTTCGTCAATCTCTATACC 58.166 37.037 0.00 0.00 0.00 2.73
8 9 7.916450 GCTTGTAGTAACTTCGTCAATCTCTAT 59.084 37.037 0.00 0.00 0.00 1.98
9 10 7.249147 GCTTGTAGTAACTTCGTCAATCTCTA 58.751 38.462 0.00 0.00 0.00 2.43
10 11 6.094061 GCTTGTAGTAACTTCGTCAATCTCT 58.906 40.000 0.00 0.00 0.00 3.10
11 12 5.003590 CGCTTGTAGTAACTTCGTCAATCTC 59.996 44.000 0.00 0.00 0.00 2.75
12 13 4.857588 CGCTTGTAGTAACTTCGTCAATCT 59.142 41.667 0.00 0.00 0.00 2.40
13 14 4.620184 ACGCTTGTAGTAACTTCGTCAATC 59.380 41.667 0.00 0.00 0.00 2.67
14 15 4.553323 ACGCTTGTAGTAACTTCGTCAAT 58.447 39.130 0.00 0.00 0.00 2.57
15 16 3.968649 ACGCTTGTAGTAACTTCGTCAA 58.031 40.909 0.00 0.00 0.00 3.18
16 17 3.251729 AGACGCTTGTAGTAACTTCGTCA 59.748 43.478 13.13 0.00 40.85 4.35
17 18 3.819537 AGACGCTTGTAGTAACTTCGTC 58.180 45.455 0.00 0.00 39.83 4.20
18 19 3.911661 AGACGCTTGTAGTAACTTCGT 57.088 42.857 0.00 0.00 0.00 3.85
19 20 3.181543 GCAAGACGCTTGTAGTAACTTCG 60.182 47.826 17.05 0.00 37.77 3.79
20 21 4.309254 GCAAGACGCTTGTAGTAACTTC 57.691 45.455 17.05 0.00 37.77 3.01
35 36 1.557651 GTTCCCGTCGATAGCAAGAC 58.442 55.000 0.00 0.00 0.00 3.01
36 37 0.099968 CGTTCCCGTCGATAGCAAGA 59.900 55.000 0.00 0.00 0.00 3.02
37 38 1.480219 GCGTTCCCGTCGATAGCAAG 61.480 60.000 0.00 0.00 36.15 4.01
38 39 1.517694 GCGTTCCCGTCGATAGCAA 60.518 57.895 0.00 0.00 36.15 3.91
39 40 2.103538 GCGTTCCCGTCGATAGCA 59.896 61.111 0.00 0.00 36.15 3.49
40 41 2.657620 GGCGTTCCCGTCGATAGC 60.658 66.667 0.00 0.00 36.15 2.97
50 51 4.796495 AATGGGAGGCGGCGTTCC 62.796 66.667 19.79 19.79 0.00 3.62
51 52 3.202706 GAATGGGAGGCGGCGTTC 61.203 66.667 9.37 6.89 0.00 3.95
54 55 4.830765 TTCGAATGGGAGGCGGCG 62.831 66.667 0.51 0.51 0.00 6.46
55 56 1.591504 TTTTTCGAATGGGAGGCGGC 61.592 55.000 0.00 0.00 0.00 6.53
56 57 1.102978 ATTTTTCGAATGGGAGGCGG 58.897 50.000 0.00 0.00 0.00 6.13
57 58 4.568152 AATATTTTTCGAATGGGAGGCG 57.432 40.909 0.00 0.00 0.00 5.52
69 70 9.918590 GTTTCTCGTAAAAGCGAAATATTTTTC 57.081 29.630 1.43 0.00 40.57 2.29
70 71 8.908678 GGTTTCTCGTAAAAGCGAAATATTTTT 58.091 29.630 1.43 0.00 40.57 1.94
71 72 8.077386 TGGTTTCTCGTAAAAGCGAAATATTTT 58.923 29.630 1.43 0.00 40.57 1.82
72 73 7.586747 TGGTTTCTCGTAAAAGCGAAATATTT 58.413 30.769 0.00 0.00 40.57 1.40
73 74 7.136289 TGGTTTCTCGTAAAAGCGAAATATT 57.864 32.000 0.00 0.00 40.57 1.28
74 75 6.730960 TGGTTTCTCGTAAAAGCGAAATAT 57.269 33.333 0.00 0.00 40.57 1.28
75 76 6.542574 TTGGTTTCTCGTAAAAGCGAAATA 57.457 33.333 0.00 0.00 40.57 1.40
76 77 5.427036 TTGGTTTCTCGTAAAAGCGAAAT 57.573 34.783 0.00 0.00 40.57 2.17
77 78 4.879104 TTGGTTTCTCGTAAAAGCGAAA 57.121 36.364 0.00 0.00 40.57 3.46
78 79 4.787245 GCTTTGGTTTCTCGTAAAAGCGAA 60.787 41.667 12.92 12.92 42.12 4.70
79 80 3.303526 GCTTTGGTTTCTCGTAAAAGCGA 60.304 43.478 3.02 5.56 42.12 4.93
80 81 2.971261 GCTTTGGTTTCTCGTAAAAGCG 59.029 45.455 3.02 0.00 42.12 4.68
81 82 2.971261 CGCTTTGGTTTCTCGTAAAAGC 59.029 45.455 8.08 8.08 45.79 3.51
82 83 4.025145 AGACGCTTTGGTTTCTCGTAAAAG 60.025 41.667 0.00 0.00 33.21 2.27
83 84 3.872771 AGACGCTTTGGTTTCTCGTAAAA 59.127 39.130 0.00 0.00 33.21 1.52
84 85 3.460103 AGACGCTTTGGTTTCTCGTAAA 58.540 40.909 0.00 0.00 33.21 2.01
85 86 3.102052 AGACGCTTTGGTTTCTCGTAA 57.898 42.857 0.00 0.00 33.21 3.18
86 87 2.806608 AGACGCTTTGGTTTCTCGTA 57.193 45.000 0.00 0.00 33.21 3.43
87 88 2.806608 TAGACGCTTTGGTTTCTCGT 57.193 45.000 0.00 0.00 35.98 4.18
88 89 3.927142 AGATTAGACGCTTTGGTTTCTCG 59.073 43.478 0.00 0.00 0.00 4.04
89 90 4.929808 TCAGATTAGACGCTTTGGTTTCTC 59.070 41.667 0.00 0.00 0.00 2.87
90 91 4.894784 TCAGATTAGACGCTTTGGTTTCT 58.105 39.130 0.00 0.00 0.00 2.52
91 92 4.093556 CCTCAGATTAGACGCTTTGGTTTC 59.906 45.833 0.00 0.00 0.00 2.78
92 93 4.003648 CCTCAGATTAGACGCTTTGGTTT 58.996 43.478 0.00 0.00 0.00 3.27
93 94 3.008049 ACCTCAGATTAGACGCTTTGGTT 59.992 43.478 0.00 0.00 0.00 3.67
94 95 2.567615 ACCTCAGATTAGACGCTTTGGT 59.432 45.455 0.00 0.00 0.00 3.67
95 96 3.252974 ACCTCAGATTAGACGCTTTGG 57.747 47.619 0.00 0.00 0.00 3.28
96 97 4.245660 TCAACCTCAGATTAGACGCTTTG 58.754 43.478 0.00 0.00 0.00 2.77
97 98 4.537135 TCAACCTCAGATTAGACGCTTT 57.463 40.909 0.00 0.00 0.00 3.51
98 99 4.442192 GGATCAACCTCAGATTAGACGCTT 60.442 45.833 0.00 0.00 35.41 4.68
99 100 3.068873 GGATCAACCTCAGATTAGACGCT 59.931 47.826 0.00 0.00 35.41 5.07
100 101 3.385577 GGATCAACCTCAGATTAGACGC 58.614 50.000 0.00 0.00 35.41 5.19
101 102 3.639094 AGGGATCAACCTCAGATTAGACG 59.361 47.826 0.00 0.00 35.43 4.18
102 103 4.202305 CCAGGGATCAACCTCAGATTAGAC 60.202 50.000 0.00 0.00 39.34 2.59
103 104 3.969976 CCAGGGATCAACCTCAGATTAGA 59.030 47.826 0.00 0.00 39.34 2.10
104 105 3.713764 ACCAGGGATCAACCTCAGATTAG 59.286 47.826 0.00 0.00 39.34 1.73
105 106 3.455910 CACCAGGGATCAACCTCAGATTA 59.544 47.826 0.00 0.00 39.34 1.75
106 107 2.240667 CACCAGGGATCAACCTCAGATT 59.759 50.000 0.00 0.00 39.34 2.40
107 108 1.842562 CACCAGGGATCAACCTCAGAT 59.157 52.381 0.00 0.00 39.34 2.90
108 109 1.279496 CACCAGGGATCAACCTCAGA 58.721 55.000 0.00 0.00 39.34 3.27
109 110 0.254178 CCACCAGGGATCAACCTCAG 59.746 60.000 0.00 0.00 39.34 3.35
110 111 0.178876 TCCACCAGGGATCAACCTCA 60.179 55.000 0.00 0.00 42.15 3.86
111 112 2.696864 TCCACCAGGGATCAACCTC 58.303 57.895 0.00 0.00 42.15 3.85
121 122 0.546598 GGTACCCTCATTCCACCAGG 59.453 60.000 0.00 0.00 0.00 4.45
122 123 1.065418 GTGGTACCCTCATTCCACCAG 60.065 57.143 10.07 0.00 42.90 4.00
123 124 0.988832 GTGGTACCCTCATTCCACCA 59.011 55.000 10.07 0.00 42.90 4.17
124 125 3.875865 GTGGTACCCTCATTCCACC 57.124 57.895 10.07 0.00 42.90 4.61
126 127 2.038863 ACAGTGGTACCCTCATTCCA 57.961 50.000 10.07 0.00 0.00 3.53
127 128 4.772886 ATAACAGTGGTACCCTCATTCC 57.227 45.455 10.07 0.00 0.00 3.01
128 129 5.990668 AGAATAACAGTGGTACCCTCATTC 58.009 41.667 10.07 12.78 0.00 2.67
129 130 7.504926 TTAGAATAACAGTGGTACCCTCATT 57.495 36.000 10.07 1.63 0.00 2.57
130 131 7.347222 TGATTAGAATAACAGTGGTACCCTCAT 59.653 37.037 10.07 0.26 0.00 2.90
131 132 6.670464 TGATTAGAATAACAGTGGTACCCTCA 59.330 38.462 10.07 0.00 0.00 3.86
132 133 7.120923 TGATTAGAATAACAGTGGTACCCTC 57.879 40.000 10.07 2.55 0.00 4.30
133 134 7.691993 ATGATTAGAATAACAGTGGTACCCT 57.308 36.000 10.07 3.03 0.00 4.34
134 135 7.990886 TCAATGATTAGAATAACAGTGGTACCC 59.009 37.037 10.07 0.32 0.00 3.69
135 136 8.958119 TCAATGATTAGAATAACAGTGGTACC 57.042 34.615 4.43 4.43 0.00 3.34
137 138 9.391006 GGTTCAATGATTAGAATAACAGTGGTA 57.609 33.333 0.00 0.00 0.00 3.25
138 139 7.888021 TGGTTCAATGATTAGAATAACAGTGGT 59.112 33.333 0.00 0.00 0.00 4.16
139 140 8.184192 GTGGTTCAATGATTAGAATAACAGTGG 58.816 37.037 0.00 0.00 0.00 4.00
140 141 8.729756 TGTGGTTCAATGATTAGAATAACAGTG 58.270 33.333 0.00 0.00 0.00 3.66
141 142 8.862325 TGTGGTTCAATGATTAGAATAACAGT 57.138 30.769 0.00 0.00 0.00 3.55
142 143 8.400947 CCTGTGGTTCAATGATTAGAATAACAG 58.599 37.037 16.83 16.83 38.46 3.16
143 144 7.888021 ACCTGTGGTTCAATGATTAGAATAACA 59.112 33.333 0.00 0.00 27.29 2.41
144 145 8.281212 ACCTGTGGTTCAATGATTAGAATAAC 57.719 34.615 0.00 0.00 27.29 1.89
145 146 8.739039 CAACCTGTGGTTCAATGATTAGAATAA 58.261 33.333 0.00 0.00 43.05 1.40
146 147 7.148086 GCAACCTGTGGTTCAATGATTAGAATA 60.148 37.037 0.00 0.00 43.05 1.75
147 148 6.350445 GCAACCTGTGGTTCAATGATTAGAAT 60.350 38.462 0.00 0.00 43.05 2.40
148 149 5.048083 GCAACCTGTGGTTCAATGATTAGAA 60.048 40.000 0.00 0.00 43.05 2.10
149 150 4.458989 GCAACCTGTGGTTCAATGATTAGA 59.541 41.667 0.00 0.00 43.05 2.10
150 151 4.460382 AGCAACCTGTGGTTCAATGATTAG 59.540 41.667 0.00 0.00 43.05 1.73
151 152 4.406456 AGCAACCTGTGGTTCAATGATTA 58.594 39.130 0.00 0.00 43.05 1.75
152 153 3.233507 AGCAACCTGTGGTTCAATGATT 58.766 40.909 0.00 0.00 43.05 2.57
153 154 2.880443 AGCAACCTGTGGTTCAATGAT 58.120 42.857 0.00 0.00 43.05 2.45
154 155 2.363306 AGCAACCTGTGGTTCAATGA 57.637 45.000 0.00 0.00 43.05 2.57
155 156 4.789012 ATAAGCAACCTGTGGTTCAATG 57.211 40.909 0.00 0.00 43.05 2.82
156 157 7.779798 ACATATATAAGCAACCTGTGGTTCAAT 59.220 33.333 0.00 0.00 43.05 2.57
157 158 7.116075 ACATATATAAGCAACCTGTGGTTCAA 58.884 34.615 0.00 0.00 43.05 2.69
158 159 6.658849 ACATATATAAGCAACCTGTGGTTCA 58.341 36.000 0.00 0.00 43.05 3.18
159 160 7.568199 AACATATATAAGCAACCTGTGGTTC 57.432 36.000 0.00 0.00 43.05 3.62
161 162 7.834181 AGAAAACATATATAAGCAACCTGTGGT 59.166 33.333 0.00 0.00 40.58 4.16
162 163 8.131100 CAGAAAACATATATAAGCAACCTGTGG 58.869 37.037 0.00 0.00 0.00 4.17
163 164 8.677300 ACAGAAAACATATATAAGCAACCTGTG 58.323 33.333 0.00 0.00 0.00 3.66
164 165 8.807948 ACAGAAAACATATATAAGCAACCTGT 57.192 30.769 0.00 0.00 0.00 4.00
165 166 9.722056 GAACAGAAAACATATATAAGCAACCTG 57.278 33.333 0.00 0.00 0.00 4.00
166 167 8.903820 GGAACAGAAAACATATATAAGCAACCT 58.096 33.333 0.00 0.00 0.00 3.50
167 168 8.903820 AGGAACAGAAAACATATATAAGCAACC 58.096 33.333 0.00 0.00 0.00 3.77
168 169 9.937175 GAGGAACAGAAAACATATATAAGCAAC 57.063 33.333 0.00 0.00 0.00 4.17
169 170 9.905713 AGAGGAACAGAAAACATATATAAGCAA 57.094 29.630 0.00 0.00 0.00 3.91
177 178 9.232473 GGAAAACTAGAGGAACAGAAAACATAT 57.768 33.333 0.00 0.00 0.00 1.78
178 179 8.437575 AGGAAAACTAGAGGAACAGAAAACATA 58.562 33.333 0.00 0.00 0.00 2.29
179 180 7.290813 AGGAAAACTAGAGGAACAGAAAACAT 58.709 34.615 0.00 0.00 0.00 2.71
180 181 6.659824 AGGAAAACTAGAGGAACAGAAAACA 58.340 36.000 0.00 0.00 0.00 2.83
181 182 8.850007 ATAGGAAAACTAGAGGAACAGAAAAC 57.150 34.615 0.00 0.00 34.56 2.43
182 183 9.503399 GAATAGGAAAACTAGAGGAACAGAAAA 57.497 33.333 0.00 0.00 34.56 2.29
183 184 8.101419 GGAATAGGAAAACTAGAGGAACAGAAA 58.899 37.037 0.00 0.00 34.56 2.52
184 185 7.458170 AGGAATAGGAAAACTAGAGGAACAGAA 59.542 37.037 0.00 0.00 34.56 3.02
185 186 6.960542 AGGAATAGGAAAACTAGAGGAACAGA 59.039 38.462 0.00 0.00 34.56 3.41
186 187 7.189079 AGGAATAGGAAAACTAGAGGAACAG 57.811 40.000 0.00 0.00 34.56 3.16
187 188 7.311109 GGAAGGAATAGGAAAACTAGAGGAACA 60.311 40.741 0.00 0.00 34.56 3.18
188 189 7.049133 GGAAGGAATAGGAAAACTAGAGGAAC 58.951 42.308 0.00 0.00 34.56 3.62
189 190 6.966461 AGGAAGGAATAGGAAAACTAGAGGAA 59.034 38.462 0.00 0.00 34.56 3.36
190 191 6.513033 AGGAAGGAATAGGAAAACTAGAGGA 58.487 40.000 0.00 0.00 34.56 3.71
191 192 6.816616 AGGAAGGAATAGGAAAACTAGAGG 57.183 41.667 0.00 0.00 34.56 3.69
192 193 8.759782 TGTTAGGAAGGAATAGGAAAACTAGAG 58.240 37.037 0.00 0.00 34.56 2.43
193 194 8.674925 TGTTAGGAAGGAATAGGAAAACTAGA 57.325 34.615 0.00 0.00 34.56 2.43
194 195 9.907229 AATGTTAGGAAGGAATAGGAAAACTAG 57.093 33.333 0.00 0.00 34.56 2.57
198 199 9.640952 CCATAATGTTAGGAAGGAATAGGAAAA 57.359 33.333 0.00 0.00 0.00 2.29
199 200 8.224720 CCCATAATGTTAGGAAGGAATAGGAAA 58.775 37.037 0.00 0.00 0.00 3.13
200 201 7.352522 ACCCATAATGTTAGGAAGGAATAGGAA 59.647 37.037 0.00 0.00 0.00 3.36
201 202 6.855061 ACCCATAATGTTAGGAAGGAATAGGA 59.145 38.462 0.00 0.00 0.00 2.94
202 203 6.942576 CACCCATAATGTTAGGAAGGAATAGG 59.057 42.308 0.00 0.00 0.00 2.57
203 204 7.518188 ACACCCATAATGTTAGGAAGGAATAG 58.482 38.462 0.00 0.00 0.00 1.73
204 205 7.460214 ACACCCATAATGTTAGGAAGGAATA 57.540 36.000 0.00 0.00 0.00 1.75
205 206 6.341408 ACACCCATAATGTTAGGAAGGAAT 57.659 37.500 0.00 0.00 0.00 3.01
206 207 5.789574 ACACCCATAATGTTAGGAAGGAA 57.210 39.130 0.00 0.00 0.00 3.36
207 208 5.789574 AACACCCATAATGTTAGGAAGGA 57.210 39.130 0.00 0.00 38.51 3.36
208 209 5.714806 ACAAACACCCATAATGTTAGGAAGG 59.285 40.000 0.00 0.00 39.36 3.46
209 210 6.834168 ACAAACACCCATAATGTTAGGAAG 57.166 37.500 0.00 0.00 39.36 3.46
210 211 7.604657 AAACAAACACCCATAATGTTAGGAA 57.395 32.000 0.00 0.00 39.36 3.36
211 212 7.287927 TCAAAACAAACACCCATAATGTTAGGA 59.712 33.333 0.00 0.00 39.36 2.94
212 213 7.437748 TCAAAACAAACACCCATAATGTTAGG 58.562 34.615 0.00 0.00 39.36 2.69
213 214 8.879342 TTCAAAACAAACACCCATAATGTTAG 57.121 30.769 0.00 0.00 39.36 2.34
214 215 9.667107 TTTTCAAAACAAACACCCATAATGTTA 57.333 25.926 0.00 0.00 39.36 2.41
215 216 8.567285 TTTTCAAAACAAACACCCATAATGTT 57.433 26.923 0.00 0.00 42.07 2.71
216 217 8.567285 TTTTTCAAAACAAACACCCATAATGT 57.433 26.923 0.00 0.00 0.00 2.71
217 218 9.448294 CATTTTTCAAAACAAACACCCATAATG 57.552 29.630 0.00 0.00 0.00 1.90
218 219 9.401058 TCATTTTTCAAAACAAACACCCATAAT 57.599 25.926 0.00 0.00 0.00 1.28
219 220 8.792830 TCATTTTTCAAAACAAACACCCATAA 57.207 26.923 0.00 0.00 0.00 1.90
220 221 8.834465 CATCATTTTTCAAAACAAACACCCATA 58.166 29.630 0.00 0.00 0.00 2.74
221 222 7.201803 CCATCATTTTTCAAAACAAACACCCAT 60.202 33.333 0.00 0.00 0.00 4.00
222 223 6.094603 CCATCATTTTTCAAAACAAACACCCA 59.905 34.615 0.00 0.00 0.00 4.51
223 224 6.459435 CCCATCATTTTTCAAAACAAACACCC 60.459 38.462 0.00 0.00 0.00 4.61
224 225 6.094742 ACCCATCATTTTTCAAAACAAACACC 59.905 34.615 0.00 0.00 0.00 4.16
225 226 6.966066 CACCCATCATTTTTCAAAACAAACAC 59.034 34.615 0.00 0.00 0.00 3.32
226 227 6.094603 CCACCCATCATTTTTCAAAACAAACA 59.905 34.615 0.00 0.00 0.00 2.83
227 228 6.459435 CCCACCCATCATTTTTCAAAACAAAC 60.459 38.462 0.00 0.00 0.00 2.93
228 229 5.591877 CCCACCCATCATTTTTCAAAACAAA 59.408 36.000 0.00 0.00 0.00 2.83
229 230 5.128919 CCCACCCATCATTTTTCAAAACAA 58.871 37.500 0.00 0.00 0.00 2.83
230 231 4.445448 CCCCACCCATCATTTTTCAAAACA 60.445 41.667 0.00 0.00 0.00 2.83
231 232 4.071423 CCCCACCCATCATTTTTCAAAAC 58.929 43.478 0.00 0.00 0.00 2.43
232 233 3.718956 ACCCCACCCATCATTTTTCAAAA 59.281 39.130 0.00 0.00 0.00 2.44
233 234 3.321950 ACCCCACCCATCATTTTTCAAA 58.678 40.909 0.00 0.00 0.00 2.69
234 235 2.983296 ACCCCACCCATCATTTTTCAA 58.017 42.857 0.00 0.00 0.00 2.69
235 236 2.636893 CAACCCCACCCATCATTTTTCA 59.363 45.455 0.00 0.00 0.00 2.69
236 237 2.027285 CCAACCCCACCCATCATTTTTC 60.027 50.000 0.00 0.00 0.00 2.29
237 238 1.984424 CCAACCCCACCCATCATTTTT 59.016 47.619 0.00 0.00 0.00 1.94
238 239 1.655372 CCAACCCCACCCATCATTTT 58.345 50.000 0.00 0.00 0.00 1.82
239 240 0.909133 GCCAACCCCACCCATCATTT 60.909 55.000 0.00 0.00 0.00 2.32
240 241 1.306056 GCCAACCCCACCCATCATT 60.306 57.895 0.00 0.00 0.00 2.57
241 242 1.889010 ATGCCAACCCCACCCATCAT 61.889 55.000 0.00 0.00 0.00 2.45
242 243 2.556216 ATGCCAACCCCACCCATCA 61.556 57.895 0.00 0.00 0.00 3.07
243 244 2.059786 CATGCCAACCCCACCCATC 61.060 63.158 0.00 0.00 0.00 3.51
244 245 2.039299 CATGCCAACCCCACCCAT 59.961 61.111 0.00 0.00 0.00 4.00
245 246 4.313707 CCATGCCAACCCCACCCA 62.314 66.667 0.00 0.00 0.00 4.51
248 249 3.537961 TTCCCCATGCCAACCCCAC 62.538 63.158 0.00 0.00 0.00 4.61
249 250 3.196385 TTCCCCATGCCAACCCCA 61.196 61.111 0.00 0.00 0.00 4.96
250 251 1.869824 TACTTCCCCATGCCAACCCC 61.870 60.000 0.00 0.00 0.00 4.95
251 252 0.261696 ATACTTCCCCATGCCAACCC 59.738 55.000 0.00 0.00 0.00 4.11
252 253 1.215423 AGATACTTCCCCATGCCAACC 59.785 52.381 0.00 0.00 0.00 3.77
253 254 2.301346 CAGATACTTCCCCATGCCAAC 58.699 52.381 0.00 0.00 0.00 3.77
254 255 1.215173 CCAGATACTTCCCCATGCCAA 59.785 52.381 0.00 0.00 0.00 4.52
255 256 0.846015 CCAGATACTTCCCCATGCCA 59.154 55.000 0.00 0.00 0.00 4.92
256 257 0.846693 ACCAGATACTTCCCCATGCC 59.153 55.000 0.00 0.00 0.00 4.40
257 258 1.490490 TCACCAGATACTTCCCCATGC 59.510 52.381 0.00 0.00 0.00 4.06
274 275 4.457834 AACTCAGGTGCACTAGTATCAC 57.542 45.455 17.98 15.38 0.00 3.06
275 276 6.599356 TTTAACTCAGGTGCACTAGTATCA 57.401 37.500 17.98 4.93 0.00 2.15
276 277 9.765795 ATAATTTAACTCAGGTGCACTAGTATC 57.234 33.333 17.98 0.00 0.00 2.24
277 278 9.765795 GATAATTTAACTCAGGTGCACTAGTAT 57.234 33.333 17.98 7.24 0.00 2.12
278 279 8.202137 GGATAATTTAACTCAGGTGCACTAGTA 58.798 37.037 17.98 4.19 0.00 1.82
279 280 7.048512 GGATAATTTAACTCAGGTGCACTAGT 58.951 38.462 17.98 14.61 0.00 2.57
280 281 7.275920 AGGATAATTTAACTCAGGTGCACTAG 58.724 38.462 17.98 13.97 0.00 2.57
281 282 7.195374 AGGATAATTTAACTCAGGTGCACTA 57.805 36.000 17.98 1.75 0.00 2.74
282 283 6.067217 AGGATAATTTAACTCAGGTGCACT 57.933 37.500 17.98 0.00 0.00 4.40
283 284 8.451908 AATAGGATAATTTAACTCAGGTGCAC 57.548 34.615 8.80 8.80 0.00 4.57
376 377 9.844257 ACTATGTTTCAAATTTGGATTTGGAAA 57.156 25.926 17.90 6.60 46.88 3.13
381 382 9.840427 CTCGTACTATGTTTCAAATTTGGATTT 57.160 29.630 17.90 0.55 35.90 2.17
382 383 9.226606 TCTCGTACTATGTTTCAAATTTGGATT 57.773 29.630 17.90 0.89 0.00 3.01
383 384 8.786826 TCTCGTACTATGTTTCAAATTTGGAT 57.213 30.769 17.90 7.93 0.00 3.41
384 385 8.610248 TTCTCGTACTATGTTTCAAATTTGGA 57.390 30.769 17.90 6.72 0.00 3.53
385 386 9.113876 GTTTCTCGTACTATGTTTCAAATTTGG 57.886 33.333 17.90 2.84 0.00 3.28
386 387 9.658475 TGTTTCTCGTACTATGTTTCAAATTTG 57.342 29.630 12.15 12.15 0.00 2.32
388 389 9.878599 CTTGTTTCTCGTACTATGTTTCAAATT 57.121 29.630 0.00 0.00 0.00 1.82
389 390 9.268268 TCTTGTTTCTCGTACTATGTTTCAAAT 57.732 29.630 0.00 0.00 0.00 2.32
390 391 8.651391 TCTTGTTTCTCGTACTATGTTTCAAA 57.349 30.769 0.00 0.00 0.00 2.69
391 392 8.651391 TTCTTGTTTCTCGTACTATGTTTCAA 57.349 30.769 0.00 0.00 0.00 2.69
392 393 8.827177 ATTCTTGTTTCTCGTACTATGTTTCA 57.173 30.769 0.00 0.00 0.00 2.69
396 397 9.268268 TGAAAATTCTTGTTTCTCGTACTATGT 57.732 29.630 0.00 0.00 36.22 2.29
419 420 9.734620 CGAGCCATTTTCTTTATCATAAATGAA 57.265 29.630 0.00 0.00 40.69 2.57
420 421 9.119418 TCGAGCCATTTTCTTTATCATAAATGA 57.881 29.630 0.00 0.00 39.26 2.57
421 422 9.390795 CTCGAGCCATTTTCTTTATCATAAATG 57.609 33.333 0.00 0.00 37.59 2.32
422 423 9.125026 ACTCGAGCCATTTTCTTTATCATAAAT 57.875 29.630 13.61 0.00 0.00 1.40
423 424 8.506168 ACTCGAGCCATTTTCTTTATCATAAA 57.494 30.769 13.61 0.00 0.00 1.40
424 425 7.226720 GGACTCGAGCCATTTTCTTTATCATAA 59.773 37.037 13.61 0.00 0.00 1.90
425 426 6.706270 GGACTCGAGCCATTTTCTTTATCATA 59.294 38.462 13.61 0.00 0.00 2.15
426 427 5.529060 GGACTCGAGCCATTTTCTTTATCAT 59.471 40.000 13.61 0.00 0.00 2.45
427 428 4.876107 GGACTCGAGCCATTTTCTTTATCA 59.124 41.667 13.61 0.00 0.00 2.15
428 429 4.876107 TGGACTCGAGCCATTTTCTTTATC 59.124 41.667 20.28 3.85 0.00 1.75
429 430 4.843728 TGGACTCGAGCCATTTTCTTTAT 58.156 39.130 20.28 0.00 0.00 1.40
430 431 4.280436 TGGACTCGAGCCATTTTCTTTA 57.720 40.909 20.28 0.13 0.00 1.85
431 432 3.140325 TGGACTCGAGCCATTTTCTTT 57.860 42.857 20.28 0.00 0.00 2.52
432 433 2.859165 TGGACTCGAGCCATTTTCTT 57.141 45.000 20.28 0.00 0.00 2.52
433 434 2.303022 TCTTGGACTCGAGCCATTTTCT 59.697 45.455 23.34 0.00 34.90 2.52
434 435 2.416893 GTCTTGGACTCGAGCCATTTTC 59.583 50.000 23.34 9.20 34.90 2.29
435 436 2.427506 GTCTTGGACTCGAGCCATTTT 58.572 47.619 23.34 0.16 34.90 1.82
436 437 1.339151 GGTCTTGGACTCGAGCCATTT 60.339 52.381 23.34 0.89 34.90 2.32
437 438 0.250513 GGTCTTGGACTCGAGCCATT 59.749 55.000 23.34 1.27 34.90 3.16
438 439 1.617947 GGGTCTTGGACTCGAGCCAT 61.618 60.000 23.34 1.63 44.91 4.40
439 440 2.283529 GGGTCTTGGACTCGAGCCA 61.284 63.158 20.28 20.28 44.91 4.75
440 441 1.827399 TTGGGTCTTGGACTCGAGCC 61.827 60.000 13.61 15.20 45.57 4.70
441 442 0.250513 ATTGGGTCTTGGACTCGAGC 59.749 55.000 13.61 5.26 35.49 5.03
442 443 2.744202 CAAATTGGGTCTTGGACTCGAG 59.256 50.000 11.84 11.84 35.49 4.04
443 444 2.105821 ACAAATTGGGTCTTGGACTCGA 59.894 45.455 0.00 0.00 35.49 4.04
444 445 2.504367 ACAAATTGGGTCTTGGACTCG 58.496 47.619 0.00 0.00 35.49 4.18
445 446 4.825085 TGTTACAAATTGGGTCTTGGACTC 59.175 41.667 0.00 0.00 32.92 3.36
446 447 4.583073 GTGTTACAAATTGGGTCTTGGACT 59.417 41.667 0.00 0.00 32.47 3.85
447 448 4.583073 AGTGTTACAAATTGGGTCTTGGAC 59.417 41.667 0.00 0.00 0.00 4.02
448 449 4.798882 AGTGTTACAAATTGGGTCTTGGA 58.201 39.130 0.00 0.00 0.00 3.53
449 450 4.022329 GGAGTGTTACAAATTGGGTCTTGG 60.022 45.833 0.00 0.00 0.00 3.61
450 451 4.022329 GGGAGTGTTACAAATTGGGTCTTG 60.022 45.833 0.00 0.00 0.00 3.02
451 452 4.141018 AGGGAGTGTTACAAATTGGGTCTT 60.141 41.667 0.00 0.00 0.00 3.01
452 453 3.397955 AGGGAGTGTTACAAATTGGGTCT 59.602 43.478 0.00 0.00 0.00 3.85
453 454 3.756963 GAGGGAGTGTTACAAATTGGGTC 59.243 47.826 0.00 0.00 0.00 4.46
454 455 3.499745 GGAGGGAGTGTTACAAATTGGGT 60.500 47.826 0.00 0.00 0.00 4.51
455 456 3.089284 GGAGGGAGTGTTACAAATTGGG 58.911 50.000 0.00 0.00 0.00 4.12
456 457 4.034285 AGGAGGGAGTGTTACAAATTGG 57.966 45.455 0.00 0.00 0.00 3.16
457 458 6.653989 AGATAGGAGGGAGTGTTACAAATTG 58.346 40.000 0.00 0.00 0.00 2.32
458 459 6.893020 AGATAGGAGGGAGTGTTACAAATT 57.107 37.500 0.00 0.00 0.00 1.82
459 460 9.845214 ATATAGATAGGAGGGAGTGTTACAAAT 57.155 33.333 0.00 0.00 0.00 2.32
460 461 9.670442 AATATAGATAGGAGGGAGTGTTACAAA 57.330 33.333 0.00 0.00 0.00 2.83
466 467 9.845214 ACAATTAATATAGATAGGAGGGAGTGT 57.155 33.333 0.00 0.00 0.00 3.55
470 471 9.268282 GGTGACAATTAATATAGATAGGAGGGA 57.732 37.037 0.00 0.00 0.00 4.20
471 472 8.198109 CGGTGACAATTAATATAGATAGGAGGG 58.802 40.741 0.00 0.00 0.00 4.30
472 473 8.967918 TCGGTGACAATTAATATAGATAGGAGG 58.032 37.037 0.00 0.00 0.00 4.30
479 480 9.489084 CTCCAAATCGGTGACAATTAATATAGA 57.511 33.333 0.00 0.00 35.57 1.98
480 481 9.273016 ACTCCAAATCGGTGACAATTAATATAG 57.727 33.333 0.00 0.00 35.57 1.31
482 483 9.793259 ATACTCCAAATCGGTGACAATTAATAT 57.207 29.630 0.00 0.00 35.57 1.28
483 484 9.621629 AATACTCCAAATCGGTGACAATTAATA 57.378 29.630 0.00 0.00 35.57 0.98
484 485 8.519799 AATACTCCAAATCGGTGACAATTAAT 57.480 30.769 0.00 0.00 35.57 1.40
485 486 7.931578 AATACTCCAAATCGGTGACAATTAA 57.068 32.000 0.00 0.00 35.57 1.40
487 488 9.621629 TTATAATACTCCAAATCGGTGACAATT 57.378 29.630 0.00 0.00 35.57 2.32
488 489 9.793259 ATTATAATACTCCAAATCGGTGACAAT 57.207 29.630 0.00 0.00 35.57 2.71
489 490 9.621629 AATTATAATACTCCAAATCGGTGACAA 57.378 29.630 0.00 0.00 35.57 3.18
490 491 9.268268 GAATTATAATACTCCAAATCGGTGACA 57.732 33.333 0.00 0.00 35.57 3.58
491 492 9.268268 TGAATTATAATACTCCAAATCGGTGAC 57.732 33.333 0.00 0.00 35.57 3.67
492 493 9.268268 GTGAATTATAATACTCCAAATCGGTGA 57.732 33.333 0.00 0.00 35.57 4.02
493 494 9.051679 TGTGAATTATAATACTCCAAATCGGTG 57.948 33.333 0.00 0.00 35.57 4.94
494 495 9.793259 ATGTGAATTATAATACTCCAAATCGGT 57.207 29.630 0.00 0.00 35.57 4.69
579 580 2.032680 ACACGCCGCTGGTATAAAAT 57.967 45.000 0.00 0.00 0.00 1.82
593 594 2.815478 TGACCCAATTTTCAAACACGC 58.185 42.857 0.00 0.00 0.00 5.34
595 596 7.313951 TCAAAATGACCCAATTTTCAAACAC 57.686 32.000 0.00 0.00 37.59 3.32
597 598 7.416817 CCTTCAAAATGACCCAATTTTCAAAC 58.583 34.615 0.00 0.00 37.59 2.93
599 600 6.060788 CCCTTCAAAATGACCCAATTTTCAA 58.939 36.000 0.00 0.00 37.59 2.69
607 608 4.141597 GGTTTTTCCCTTCAAAATGACCCA 60.142 41.667 0.00 0.00 0.00 4.51
652 653 7.025485 CCACAAAATGGCTGTTAATGTTTTT 57.975 32.000 0.00 0.00 43.24 1.94
688 689 5.159273 AGTGTCAGAAAGATTCTCTTCCC 57.841 43.478 0.00 0.00 35.27 3.97
992 1014 0.680061 GGCCCTCTTCATACCTACGG 59.320 60.000 0.00 0.00 0.00 4.02
1160 1182 0.378962 TGACAACAAAAAGCGACCGG 59.621 50.000 0.00 0.00 0.00 5.28
1176 1198 1.573156 GCGCAAATCGATTCGTTTGAC 59.427 47.619 24.79 18.20 41.67 3.18
1177 1199 1.785167 CGCGCAAATCGATTCGTTTGA 60.785 47.619 24.79 3.68 41.67 2.69
1178 1200 0.556658 CGCGCAAATCGATTCGTTTG 59.443 50.000 11.83 20.14 41.67 2.93
1182 1204 1.715705 GAGCGCGCAAATCGATTCG 60.716 57.895 35.10 12.68 41.67 3.34
1256 1283 8.815565 TTAGAGCCATTGGACAAATATACAAA 57.184 30.769 6.95 0.00 0.00 2.83
1260 1287 7.292356 TCCTCTTAGAGCCATTGGACAAATATA 59.708 37.037 6.95 0.00 0.00 0.86
1261 1288 6.101734 TCCTCTTAGAGCCATTGGACAAATAT 59.898 38.462 6.95 0.00 0.00 1.28
1329 1356 5.880054 ACATAGACTAAATTGTGCGCTTT 57.120 34.783 9.73 2.89 0.00 3.51
1330 1357 5.872617 TGTACATAGACTAAATTGTGCGCTT 59.127 36.000 9.73 0.00 0.00 4.68
1331 1358 5.416083 TGTACATAGACTAAATTGTGCGCT 58.584 37.500 9.73 0.00 0.00 5.92
1372 1406 8.458212 CTTCTCAAAGAAGGCAAAATAATGAC 57.542 34.615 8.53 0.00 46.03 3.06
1391 1425 3.960102 ACCCTCAAAATTGTTGCTTCTCA 59.040 39.130 0.00 0.00 0.00 3.27
1405 1439 8.485578 ACTTTTGGTGAATTATTACCCTCAAA 57.514 30.769 0.00 0.00 36.10 2.69
1409 1443 6.557568 TGGACTTTTGGTGAATTATTACCCT 58.442 36.000 0.00 0.00 36.10 4.34
1462 1497 6.293790 GCGTTCAGAATTATTACCCCCAATAC 60.294 42.308 0.00 0.00 0.00 1.89
1467 1502 3.314357 GTGCGTTCAGAATTATTACCCCC 59.686 47.826 0.00 0.00 0.00 5.40
1483 1518 1.960689 AGCCAATTTGTTAGGTGCGTT 59.039 42.857 0.00 0.00 0.00 4.84
1522 1557 9.338622 ACACAGCTACTTAAGAAAGTTTAACAT 57.661 29.630 10.09 0.00 43.60 2.71
1523 1558 8.609176 CACACAGCTACTTAAGAAAGTTTAACA 58.391 33.333 10.09 0.00 43.60 2.41
1529 1564 4.703897 TGCACACAGCTACTTAAGAAAGT 58.296 39.130 10.09 0.00 44.23 2.66
1543 1578 1.064505 CTCCACAACACTTGCACACAG 59.935 52.381 0.00 0.00 0.00 3.66
1626 1824 4.757149 ACAGACAAGAAAAGTGGTATCTGC 59.243 41.667 0.00 0.00 36.60 4.26
1685 1883 8.463930 AGTGTGAAAGAAAACTATCATTTCCA 57.536 30.769 0.00 0.00 37.47 3.53
1692 1890 7.259290 TGTCCAAGTGTGAAAGAAAACTATC 57.741 36.000 0.00 0.00 0.00 2.08
1701 1899 6.372659 AGTTAGCATATGTCCAAGTGTGAAAG 59.627 38.462 4.29 0.00 0.00 2.62
1704 1903 5.046663 TCAGTTAGCATATGTCCAAGTGTGA 60.047 40.000 4.29 0.00 0.00 3.58
1719 1918 1.679944 GCTGGCCAGAATCAGTTAGCA 60.680 52.381 37.21 0.00 33.81 3.49
1774 1973 2.620251 TGCTCGGATATTGACCTTGG 57.380 50.000 0.00 0.00 0.00 3.61
1775 1974 3.879295 ACAATGCTCGGATATTGACCTTG 59.121 43.478 16.99 0.00 37.63 3.61
1776 1975 4.156455 ACAATGCTCGGATATTGACCTT 57.844 40.909 16.99 0.00 37.63 3.50
1780 1979 8.450578 AAGAATAAACAATGCTCGGATATTGA 57.549 30.769 16.99 1.82 37.63 2.57
1788 1987 3.953853 CGCGTAAGAATAAACAATGCTCG 59.046 43.478 0.00 0.00 43.02 5.03
1791 1990 4.033587 TCCTCGCGTAAGAATAAACAATGC 59.966 41.667 5.77 0.00 43.02 3.56
1792 1991 5.518847 TCTCCTCGCGTAAGAATAAACAATG 59.481 40.000 5.77 0.00 43.02 2.82
1807 2006 4.955925 ATCAGATATTACTCTCCTCGCG 57.044 45.455 0.00 0.00 0.00 5.87
1837 2036 9.401058 TGAACCCAAAACATATTGTGAAAATTT 57.599 25.926 0.00 0.00 0.00 1.82
1866 2065 5.008118 TGTCATTTGCGCGGATTTATCATTA 59.992 36.000 8.83 0.00 0.00 1.90
1868 2067 3.314913 TGTCATTTGCGCGGATTTATCAT 59.685 39.130 8.83 0.00 0.00 2.45
1873 2078 1.000827 TGTTGTCATTTGCGCGGATTT 60.001 42.857 8.83 0.00 0.00 2.17
1874 2079 0.595588 TGTTGTCATTTGCGCGGATT 59.404 45.000 8.83 0.00 0.00 3.01
1875 2080 0.810648 ATGTTGTCATTTGCGCGGAT 59.189 45.000 8.83 0.00 0.00 4.18
1876 2081 0.109827 CATGTTGTCATTTGCGCGGA 60.110 50.000 8.83 0.00 31.15 5.54
1877 2082 1.676438 GCATGTTGTCATTTGCGCGG 61.676 55.000 8.83 0.00 31.15 6.46
1878 2083 0.730155 AGCATGTTGTCATTTGCGCG 60.730 50.000 0.00 0.00 31.18 6.86
1879 2084 1.421382 AAGCATGTTGTCATTTGCGC 58.579 45.000 0.00 0.00 31.18 6.09
1880 2085 8.559222 TTATTATAAGCATGTTGTCATTTGCG 57.441 30.769 0.00 0.00 31.18 4.85
1942 2147 8.899771 CGGGTGAACATTAGGAAATAAAATACT 58.100 33.333 0.00 0.00 0.00 2.12
1944 2149 7.201839 GCCGGGTGAACATTAGGAAATAAAATA 60.202 37.037 2.18 0.00 0.00 1.40
1945 2150 6.406512 GCCGGGTGAACATTAGGAAATAAAAT 60.407 38.462 2.18 0.00 0.00 1.82
1948 2153 3.949113 GCCGGGTGAACATTAGGAAATAA 59.051 43.478 2.18 0.00 0.00 1.40
1955 2357 1.094785 CTTGGCCGGGTGAACATTAG 58.905 55.000 2.18 0.00 0.00 1.73
1967 2369 2.403252 ATACTGAGGTTTCTTGGCCG 57.597 50.000 0.00 0.00 0.00 6.13
1970 2372 7.429636 TTTACGAAATACTGAGGTTTCTTGG 57.570 36.000 9.72 0.37 33.32 3.61
1985 2387 6.313905 ACTTGAAGCGATCAGATTTACGAAAT 59.686 34.615 0.00 0.00 39.77 2.17
1990 2392 6.170675 ACAACTTGAAGCGATCAGATTTAC 57.829 37.500 0.00 0.00 39.77 2.01
1995 2397 6.208988 AGTATACAACTTGAAGCGATCAGA 57.791 37.500 5.50 0.00 39.77 3.27
2021 2423 1.615262 GTCAAGGCTAGCCCCCAAT 59.385 57.895 30.42 8.58 36.58 3.16
2068 2476 6.415573 ACACTAGTTCCTGGTTTATTCCATC 58.584 40.000 0.00 0.00 36.84 3.51
2074 2482 7.549147 TTACTGACACTAGTTCCTGGTTTAT 57.451 36.000 0.00 0.00 32.19 1.40
2096 2504 8.584063 ACTGAAACAGGACTTAAACCTTTTTA 57.416 30.769 10.49 6.49 37.48 1.52
2112 2521 4.514441 AGAAGTGCTTGATGACTGAAACAG 59.486 41.667 0.00 0.00 37.52 3.16
2128 2537 1.943507 GCTCAGGGTCTCAAGAAGTGC 60.944 57.143 0.00 0.00 0.00 4.40
2133 2542 2.310349 ACTCTAGCTCAGGGTCTCAAGA 59.690 50.000 0.00 0.00 28.94 3.02
2141 2550 1.277557 AGTGCAAACTCTAGCTCAGGG 59.722 52.381 0.00 0.00 0.00 4.45
2257 2676 2.816087 GCACCTGCAGTATCCCATAATG 59.184 50.000 13.81 0.00 41.59 1.90
2704 3276 4.519540 ACCAAAATGTGCCAGATTACAC 57.480 40.909 0.00 0.00 37.31 2.90
2705 3277 4.343526 ACAACCAAAATGTGCCAGATTACA 59.656 37.500 0.00 0.00 0.00 2.41
2825 3409 6.969473 CAGGTTTCTTCTTCTTCAACAAAGAC 59.031 38.462 0.00 0.00 43.75 3.01
2829 3413 5.125417 CACCAGGTTTCTTCTTCTTCAACAA 59.875 40.000 0.00 0.00 0.00 2.83
3476 5865 4.984785 CACCATAATACACAGATCTCACCG 59.015 45.833 0.00 0.00 0.00 4.94
3524 5914 1.919240 TAGTCAGCCTTCCGAGACAA 58.081 50.000 0.00 0.00 33.56 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.