Multiple sequence alignment - TraesCS7D01G387300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G387300 chr7D 100.000 2903 0 0 983 3885 501099771 501102673 0.000000e+00 5361.0
1 TraesCS7D01G387300 chr7D 100.000 678 0 0 1 678 501098789 501099466 0.000000e+00 1253.0
2 TraesCS7D01G387300 chr7D 100.000 151 0 0 987 1137 501099316 501099466 2.960000e-71 279.0
3 TraesCS7D01G387300 chr7D 100.000 151 0 0 528 678 501099775 501099925 2.960000e-71 279.0
4 TraesCS7D01G387300 chr7D 83.408 223 25 6 3304 3514 445900229 445900451 3.060000e-46 196.0
5 TraesCS7D01G387300 chr7A 95.766 2338 64 12 983 3294 567587347 567589675 0.000000e+00 3736.0
6 TraesCS7D01G387300 chr7A 85.915 710 50 26 1 678 567586810 567587501 0.000000e+00 712.0
7 TraesCS7D01G387300 chr7A 97.727 44 1 0 3048 3091 611796448 611796491 4.160000e-10 76.8
8 TraesCS7D01G387300 chr7B 96.151 1299 37 3 983 2269 530383453 530384750 0.000000e+00 2109.0
9 TraesCS7D01G387300 chr7B 92.197 1038 43 8 2268 3287 530384885 530385902 0.000000e+00 1434.0
10 TraesCS7D01G387300 chr7B 91.335 704 27 14 1 678 530382912 530383607 0.000000e+00 931.0
11 TraesCS7D01G387300 chr7B 87.500 64 6 2 3048 3111 115193 115254 5.380000e-09 73.1
12 TraesCS7D01G387300 chr4D 87.773 229 27 1 3287 3514 3394767 3394539 2.300000e-67 267.0
13 TraesCS7D01G387300 chr1A 87.975 158 18 1 3335 3491 30317577 30317734 6.630000e-43 185.0
14 TraesCS7D01G387300 chr5D 84.375 160 20 2 3305 3459 43137771 43137930 6.720000e-33 152.0
15 TraesCS7D01G387300 chr5D 91.379 58 4 1 3051 3107 273117886 273117943 1.160000e-10 78.7
16 TraesCS7D01G387300 chr5D 83.582 67 9 1 3277 3343 445644915 445644979 1.170000e-05 62.1
17 TraesCS7D01G387300 chr2A 88.235 68 4 3 3048 3112 510432998 510433064 1.160000e-10 78.7
18 TraesCS7D01G387300 chr4A 91.071 56 3 1 3051 3106 46225834 46225781 1.500000e-09 75.0
19 TraesCS7D01G387300 chr3D 89.831 59 5 1 3049 3107 591618643 591618700 1.500000e-09 75.0
20 TraesCS7D01G387300 chr2D 86.957 69 5 4 3052 3119 61804677 61804612 1.500000e-09 75.0
21 TraesCS7D01G387300 chr3B 87.302 63 8 0 3385 3447 622129734 622129672 5.380000e-09 73.1
22 TraesCS7D01G387300 chr3A 100.000 35 0 0 3287 3321 653972181 653972215 9.010000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G387300 chr7D 501098789 501102673 3884 False 1793.000000 5361 100.000000 1 3885 4 chr7D.!!$F2 3884
1 TraesCS7D01G387300 chr7A 567586810 567589675 2865 False 2224.000000 3736 90.840500 1 3294 2 chr7A.!!$F2 3293
2 TraesCS7D01G387300 chr7B 530382912 530385902 2990 False 1491.333333 2109 93.227667 1 3287 3 chr7B.!!$F2 3286

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
659 714 0.036858 GAGGAGGAGCACCACTTCAC 60.037 60.000 2.07 0.00 38.94 3.18 F
671 726 0.321671 CACTTCACCCACTCCGACAT 59.678 55.000 0.00 0.00 0.00 3.06 F
672 727 0.608640 ACTTCACCCACTCCGACATC 59.391 55.000 0.00 0.00 0.00 3.06 F
674 729 0.895530 TTCACCCACTCCGACATCTC 59.104 55.000 0.00 0.00 0.00 2.75 F
675 730 0.970937 TCACCCACTCCGACATCTCC 60.971 60.000 0.00 0.00 0.00 3.71 F
676 731 1.686110 ACCCACTCCGACATCTCCC 60.686 63.158 0.00 0.00 0.00 4.30 F
2016 2098 1.820519 TGGCATCTCTTGGTTGCAATC 59.179 47.619 0.59 1.16 41.11 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2604 2822 0.804989 CAACTCCCAATCGGAACAGC 59.195 55.000 0.00 0.00 41.40 4.40 R
2666 2884 9.944376 AGAAACTTATCTGTATTACTGAAGCAA 57.056 29.630 7.39 2.91 29.93 3.91 R
2684 2902 7.929785 ACAAGATTTCGGTGACTAAGAAACTTA 59.070 33.333 4.29 0.00 36.81 2.24 R
2711 2929 7.554835 AGTTCTGTCACAACCAATACAAAGTAA 59.445 33.333 0.00 0.00 0.00 2.24 R
2714 2932 6.377327 AGTTCTGTCACAACCAATACAAAG 57.623 37.500 0.00 0.00 0.00 2.77 R
2730 2948 2.289506 GGCCGGTAGAAGAAAGTTCTGT 60.290 50.000 1.90 0.00 37.65 3.41 R
3779 4035 0.032540 CACAAACTTTCCTGCAGGCC 59.967 55.000 28.91 0.00 34.44 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 3.140225 GATCCCGTCCCTGTCTCGC 62.140 68.421 0.00 0.00 0.00 5.03
80 93 1.467190 AGGTGGTGGATTTGGGGGA 60.467 57.895 0.00 0.00 0.00 4.81
81 94 1.000359 GGTGGTGGATTTGGGGGAG 60.000 63.158 0.00 0.00 0.00 4.30
86 99 1.484256 GGTGGATTTGGGGGAGGTTTT 60.484 52.381 0.00 0.00 0.00 2.43
95 108 2.597510 GGAGGTTTTGCCCGTGCT 60.598 61.111 0.00 0.00 38.26 4.40
140 162 2.359975 CCTCCTGCCGGTGGAAAC 60.360 66.667 16.91 0.00 45.01 2.78
241 275 1.228063 ACAGTGCCAGCTGAACCAG 60.228 57.895 17.39 10.96 39.62 4.00
289 326 3.069016 TGTTCTCTGCTAAAAGACGACCA 59.931 43.478 0.00 0.00 0.00 4.02
329 366 9.175915 CGTATTGTCAACGTAAAAACGTATTAG 57.824 33.333 3.77 0.00 46.41 1.73
335 372 6.638873 TCAACGTAAAAACGTATTAGGACGAA 59.361 34.615 16.12 1.74 46.41 3.85
340 377 0.383231 ACGTATTAGGACGAAGGCGG 59.617 55.000 2.55 0.00 45.82 6.13
342 379 1.334779 CGTATTAGGACGAAGGCGGAG 60.335 57.143 0.00 0.00 45.82 4.63
520 575 4.416601 CCCTCCCGTTCCCCTCCT 62.417 72.222 0.00 0.00 0.00 3.69
521 576 2.764547 CCTCCCGTTCCCCTCCTC 60.765 72.222 0.00 0.00 0.00 3.71
522 577 2.764547 CTCCCGTTCCCCTCCTCC 60.765 72.222 0.00 0.00 0.00 4.30
523 578 3.607299 TCCCGTTCCCCTCCTCCA 61.607 66.667 0.00 0.00 0.00 3.86
524 579 2.609610 CCCGTTCCCCTCCTCCAA 60.610 66.667 0.00 0.00 0.00 3.53
525 580 2.669240 CCGTTCCCCTCCTCCAAC 59.331 66.667 0.00 0.00 0.00 3.77
526 581 2.264794 CGTTCCCCTCCTCCAACG 59.735 66.667 0.00 0.00 36.05 4.10
527 582 2.046217 GTTCCCCTCCTCCAACGC 60.046 66.667 0.00 0.00 0.00 4.84
528 583 3.327404 TTCCCCTCCTCCAACGCC 61.327 66.667 0.00 0.00 0.00 5.68
568 623 2.564975 TCGCCGACGAGTTCTTCC 59.435 61.111 0.00 0.00 45.12 3.46
569 624 1.970114 TCGCCGACGAGTTCTTCCT 60.970 57.895 0.00 0.00 45.12 3.36
570 625 1.514443 CGCCGACGAGTTCTTCCTC 60.514 63.158 0.00 0.00 43.93 3.71
577 632 2.964911 GAGTTCTTCCTCGGCATCG 58.035 57.895 0.00 0.00 37.82 3.84
578 633 0.456221 GAGTTCTTCCTCGGCATCGA 59.544 55.000 0.00 0.00 43.86 3.59
579 634 0.173708 AGTTCTTCCTCGGCATCGAC 59.826 55.000 0.00 0.00 40.88 4.20
580 635 1.138883 TTCTTCCTCGGCATCGACG 59.861 57.895 0.00 0.00 40.88 5.12
581 636 1.310216 TTCTTCCTCGGCATCGACGA 61.310 55.000 0.00 0.00 42.47 4.20
586 641 3.872728 TCGGCATCGACGAGGACG 61.873 66.667 30.17 30.17 46.68 4.79
587 642 4.907034 CGGCATCGACGAGGACGG 62.907 72.222 28.63 11.06 41.37 4.79
590 645 4.570663 CATCGACGAGGACGGCCC 62.571 72.222 1.76 0.00 45.81 5.80
620 675 4.611119 GGAGCCCTCCTACCTCTC 57.389 66.667 7.08 0.00 46.16 3.20
621 676 1.152419 GGAGCCCTCCTACCTCTCC 60.152 68.421 7.08 0.00 46.16 3.71
622 677 1.661004 GGAGCCCTCCTACCTCTCCT 61.661 65.000 7.08 0.00 46.16 3.69
623 678 0.263468 GAGCCCTCCTACCTCTCCTT 59.737 60.000 0.00 0.00 0.00 3.36
624 679 0.263468 AGCCCTCCTACCTCTCCTTC 59.737 60.000 0.00 0.00 0.00 3.46
625 680 0.263468 GCCCTCCTACCTCTCCTTCT 59.737 60.000 0.00 0.00 0.00 2.85
626 681 1.756333 GCCCTCCTACCTCTCCTTCTC 60.756 61.905 0.00 0.00 0.00 2.87
627 682 1.133294 CCCTCCTACCTCTCCTTCTCC 60.133 61.905 0.00 0.00 0.00 3.71
628 683 1.477923 CCTCCTACCTCTCCTTCTCCG 60.478 61.905 0.00 0.00 0.00 4.63
629 684 1.491332 CTCCTACCTCTCCTTCTCCGA 59.509 57.143 0.00 0.00 0.00 4.55
630 685 1.212441 TCCTACCTCTCCTTCTCCGAC 59.788 57.143 0.00 0.00 0.00 4.79
631 686 1.301423 CTACCTCTCCTTCTCCGACG 58.699 60.000 0.00 0.00 0.00 5.12
632 687 0.747283 TACCTCTCCTTCTCCGACGC 60.747 60.000 0.00 0.00 0.00 5.19
633 688 2.776913 CCTCTCCTTCTCCGACGCC 61.777 68.421 0.00 0.00 0.00 5.68
634 689 1.751162 CTCTCCTTCTCCGACGCCT 60.751 63.158 0.00 0.00 0.00 5.52
635 690 1.304217 TCTCCTTCTCCGACGCCTT 60.304 57.895 0.00 0.00 0.00 4.35
636 691 1.139947 CTCCTTCTCCGACGCCTTC 59.860 63.158 0.00 0.00 0.00 3.46
645 700 2.802106 GACGCCTTCGAGGAGGAG 59.198 66.667 7.36 6.35 39.71 3.69
646 701 2.756283 ACGCCTTCGAGGAGGAGG 60.756 66.667 7.36 1.30 39.71 4.30
647 702 2.440430 CGCCTTCGAGGAGGAGGA 60.440 66.667 7.36 0.00 37.67 3.71
648 703 2.485795 CGCCTTCGAGGAGGAGGAG 61.486 68.421 7.36 0.00 37.67 3.69
649 704 2.791868 GCCTTCGAGGAGGAGGAGC 61.792 68.421 7.36 0.00 37.67 4.70
650 705 1.380515 CCTTCGAGGAGGAGGAGCA 60.381 63.158 0.00 0.00 37.67 4.26
651 706 1.671901 CCTTCGAGGAGGAGGAGCAC 61.672 65.000 0.00 0.00 37.67 4.40
652 707 1.671901 CTTCGAGGAGGAGGAGCACC 61.672 65.000 0.00 0.00 0.00 5.01
653 708 2.363018 CGAGGAGGAGGAGCACCA 60.363 66.667 2.07 0.00 38.94 4.17
654 709 2.716017 CGAGGAGGAGGAGCACCAC 61.716 68.421 2.07 0.00 38.94 4.16
655 710 1.305718 GAGGAGGAGGAGCACCACT 60.306 63.158 2.07 0.00 38.94 4.00
656 711 0.907230 GAGGAGGAGGAGCACCACTT 60.907 60.000 2.07 0.00 38.94 3.16
657 712 0.907230 AGGAGGAGGAGCACCACTTC 60.907 60.000 2.07 1.74 38.94 3.01
658 713 1.194781 GGAGGAGGAGCACCACTTCA 61.195 60.000 11.17 0.00 35.34 3.02
659 714 0.036858 GAGGAGGAGCACCACTTCAC 60.037 60.000 2.07 0.00 38.94 3.18
660 715 1.003233 GGAGGAGCACCACTTCACC 60.003 63.158 2.07 0.00 38.94 4.02
661 716 1.003233 GAGGAGCACCACTTCACCC 60.003 63.158 2.07 0.00 38.94 4.61
662 717 1.768684 GAGGAGCACCACTTCACCCA 61.769 60.000 2.07 0.00 38.94 4.51
663 718 1.600916 GGAGCACCACTTCACCCAC 60.601 63.158 0.00 0.00 35.97 4.61
664 719 1.451936 GAGCACCACTTCACCCACT 59.548 57.895 0.00 0.00 0.00 4.00
665 720 0.603975 GAGCACCACTTCACCCACTC 60.604 60.000 0.00 0.00 0.00 3.51
666 721 1.600916 GCACCACTTCACCCACTCC 60.601 63.158 0.00 0.00 0.00 3.85
667 722 1.301716 CACCACTTCACCCACTCCG 60.302 63.158 0.00 0.00 0.00 4.63
668 723 1.458777 ACCACTTCACCCACTCCGA 60.459 57.895 0.00 0.00 0.00 4.55
669 724 1.004918 CCACTTCACCCACTCCGAC 60.005 63.158 0.00 0.00 0.00 4.79
670 725 1.745890 CACTTCACCCACTCCGACA 59.254 57.895 0.00 0.00 0.00 4.35
671 726 0.321671 CACTTCACCCACTCCGACAT 59.678 55.000 0.00 0.00 0.00 3.06
672 727 0.608640 ACTTCACCCACTCCGACATC 59.391 55.000 0.00 0.00 0.00 3.06
673 728 0.898320 CTTCACCCACTCCGACATCT 59.102 55.000 0.00 0.00 0.00 2.90
674 729 0.895530 TTCACCCACTCCGACATCTC 59.104 55.000 0.00 0.00 0.00 2.75
675 730 0.970937 TCACCCACTCCGACATCTCC 60.971 60.000 0.00 0.00 0.00 3.71
676 731 1.686110 ACCCACTCCGACATCTCCC 60.686 63.158 0.00 0.00 0.00 4.30
677 732 2.435693 CCCACTCCGACATCTCCCC 61.436 68.421 0.00 0.00 0.00 4.81
1269 1327 3.154473 TCCTTCCTCCGGATGCGG 61.154 66.667 21.08 21.08 0.00 5.69
2016 2098 1.820519 TGGCATCTCTTGGTTGCAATC 59.179 47.619 0.59 1.16 41.11 2.67
2054 2136 4.279671 TGAGAAACCTCACTCTCTTGACTC 59.720 45.833 0.00 0.00 39.11 3.36
2112 2194 9.179909 TCATACTTCTTTGGTTTTTAAGTGTCA 57.820 29.630 0.00 0.00 32.85 3.58
2414 2632 3.580458 ACCTCAGTGTTGCTCTTCTGTAT 59.420 43.478 0.00 0.00 0.00 2.29
2475 2693 4.680172 AGCTTCTCTGCTGCACTATAAGTG 60.680 45.833 0.00 2.65 41.40 3.16
2604 2822 8.567948 ACTATTTGGTTTGAAGTGTTGATGTAG 58.432 33.333 0.00 0.00 0.00 2.74
2684 2902 7.105588 TGTCATGTTGCTTCAGTAATACAGAT 58.894 34.615 0.00 0.00 0.00 2.90
2711 2929 6.766467 AGTTTCTTAGTCACCGAAATCTTGTT 59.234 34.615 0.00 0.00 0.00 2.83
2714 2932 7.647907 TCTTAGTCACCGAAATCTTGTTTAC 57.352 36.000 0.00 0.00 0.00 2.01
2730 2948 8.282455 TCTTGTTTACTTTGTATTGGTTGTGA 57.718 30.769 0.00 0.00 0.00 3.58
2747 2965 5.236695 GGTTGTGACAGAACTTTCTTCTACC 59.763 44.000 14.44 0.00 34.74 3.18
2994 3236 1.247567 AGCACACAATACCAACTGGC 58.752 50.000 0.00 0.00 39.32 4.85
3056 3298 2.484065 CGTTTGGAGTGGTTGGTACTCA 60.484 50.000 7.36 0.00 44.92 3.41
3093 3335 8.819643 AATATAAGAGCGTTTAGATCACTTCC 57.180 34.615 0.00 0.00 37.82 3.46
3094 3336 4.810191 AAGAGCGTTTAGATCACTTCCT 57.190 40.909 0.00 0.00 37.82 3.36
3095 3337 5.916661 AAGAGCGTTTAGATCACTTCCTA 57.083 39.130 0.00 0.00 37.82 2.94
3096 3338 6.472686 AAGAGCGTTTAGATCACTTCCTAT 57.527 37.500 0.00 0.00 37.82 2.57
3097 3339 5.837437 AGAGCGTTTAGATCACTTCCTATG 58.163 41.667 0.00 0.00 37.82 2.23
3098 3340 4.950050 AGCGTTTAGATCACTTCCTATGG 58.050 43.478 0.00 0.00 0.00 2.74
3099 3341 4.649674 AGCGTTTAGATCACTTCCTATGGA 59.350 41.667 0.00 0.00 0.00 3.41
3100 3342 4.985409 GCGTTTAGATCACTTCCTATGGAG 59.015 45.833 0.00 0.00 31.21 3.86
3101 3343 5.533482 CGTTTAGATCACTTCCTATGGAGG 58.467 45.833 0.00 0.00 45.35 4.30
3102 3344 5.509840 CGTTTAGATCACTTCCTATGGAGGG 60.510 48.000 0.00 0.00 43.94 4.30
3103 3345 5.418692 TTAGATCACTTCCTATGGAGGGA 57.581 43.478 0.00 0.00 43.94 4.20
3247 3503 5.351740 GGAAGCAAAGTACAGTTAGATCCAC 59.648 44.000 0.00 0.00 0.00 4.02
3287 3543 7.687941 TGGAGAAACCATCTTTTATCAGAAC 57.312 36.000 0.00 0.00 44.64 3.01
3288 3544 7.461749 TGGAGAAACCATCTTTTATCAGAACT 58.538 34.615 0.00 0.00 44.64 3.01
3289 3545 8.602424 TGGAGAAACCATCTTTTATCAGAACTA 58.398 33.333 0.00 0.00 44.64 2.24
3290 3546 9.103861 GGAGAAACCATCTTTTATCAGAACTAG 57.896 37.037 0.00 0.00 38.96 2.57
3291 3547 9.877178 GAGAAACCATCTTTTATCAGAACTAGA 57.123 33.333 0.00 0.00 38.96 2.43
3295 3551 9.606631 AACCATCTTTTATCAGAACTAGATGAC 57.393 33.333 10.55 0.00 40.72 3.06
3296 3552 8.207545 ACCATCTTTTATCAGAACTAGATGACC 58.792 37.037 10.55 0.00 40.72 4.02
3297 3553 7.659390 CCATCTTTTATCAGAACTAGATGACCC 59.341 40.741 10.55 0.00 40.72 4.46
3298 3554 6.806751 TCTTTTATCAGAACTAGATGACCCG 58.193 40.000 0.00 0.00 0.00 5.28
3299 3555 6.380274 TCTTTTATCAGAACTAGATGACCCGT 59.620 38.462 0.00 0.00 0.00 5.28
3300 3556 6.540438 TTTATCAGAACTAGATGACCCGTT 57.460 37.500 0.00 0.00 0.00 4.44
3301 3557 3.868757 TCAGAACTAGATGACCCGTTG 57.131 47.619 0.00 0.00 0.00 4.10
3302 3558 2.094182 TCAGAACTAGATGACCCGTTGC 60.094 50.000 0.00 0.00 0.00 4.17
3303 3559 1.135083 AGAACTAGATGACCCGTTGCG 60.135 52.381 0.00 0.00 0.00 4.85
3304 3560 0.739813 AACTAGATGACCCGTTGCGC 60.740 55.000 0.00 0.00 0.00 6.09
3305 3561 1.883084 CTAGATGACCCGTTGCGCC 60.883 63.158 4.18 0.00 0.00 6.53
3306 3562 3.379865 TAGATGACCCGTTGCGCCC 62.380 63.158 4.18 0.00 0.00 6.13
3308 3564 4.424711 ATGACCCGTTGCGCCCAT 62.425 61.111 4.18 0.00 0.00 4.00
3309 3565 2.933878 GATGACCCGTTGCGCCCATA 62.934 60.000 4.18 0.00 0.00 2.74
3310 3566 2.895372 GACCCGTTGCGCCCATAG 60.895 66.667 4.18 0.00 0.00 2.23
3320 3576 4.093115 GCCCATAGCGCAAAAAGC 57.907 55.556 11.47 2.54 40.87 3.51
3321 3577 1.215117 GCCCATAGCGCAAAAAGCA 59.785 52.632 11.47 0.00 46.13 3.91
3322 3578 0.389687 GCCCATAGCGCAAAAAGCAA 60.390 50.000 11.47 0.00 46.13 3.91
3323 3579 1.938926 GCCCATAGCGCAAAAAGCAAA 60.939 47.619 11.47 0.00 46.13 3.68
3324 3580 2.411904 CCCATAGCGCAAAAAGCAAAA 58.588 42.857 11.47 0.00 46.13 2.44
3325 3581 2.412770 CCCATAGCGCAAAAAGCAAAAG 59.587 45.455 11.47 0.00 46.13 2.27
3326 3582 2.159801 CCATAGCGCAAAAAGCAAAAGC 60.160 45.455 11.47 0.00 46.13 3.51
3330 3586 3.715839 GCAAAAAGCAAAAGCGAGC 57.284 47.368 0.00 0.00 44.79 5.03
3331 3587 0.233074 GCAAAAAGCAAAAGCGAGCC 59.767 50.000 0.00 0.00 44.79 4.70
3332 3588 1.569708 CAAAAAGCAAAAGCGAGCCA 58.430 45.000 0.00 0.00 0.00 4.75
3333 3589 1.932511 CAAAAAGCAAAAGCGAGCCAA 59.067 42.857 0.00 0.00 0.00 4.52
3334 3590 1.856802 AAAAGCAAAAGCGAGCCAAG 58.143 45.000 0.00 0.00 0.00 3.61
3335 3591 0.746659 AAAGCAAAAGCGAGCCAAGT 59.253 45.000 0.00 0.00 0.00 3.16
3336 3592 1.604604 AAGCAAAAGCGAGCCAAGTA 58.395 45.000 0.00 0.00 0.00 2.24
3337 3593 1.826385 AGCAAAAGCGAGCCAAGTAT 58.174 45.000 0.00 0.00 0.00 2.12
3338 3594 2.162681 AGCAAAAGCGAGCCAAGTATT 58.837 42.857 0.00 0.00 0.00 1.89
3339 3595 2.162408 AGCAAAAGCGAGCCAAGTATTC 59.838 45.455 0.00 0.00 0.00 1.75
3340 3596 2.095263 GCAAAAGCGAGCCAAGTATTCA 60.095 45.455 0.00 0.00 0.00 2.57
3341 3597 3.611530 GCAAAAGCGAGCCAAGTATTCAA 60.612 43.478 0.00 0.00 0.00 2.69
3342 3598 4.545610 CAAAAGCGAGCCAAGTATTCAAA 58.454 39.130 0.00 0.00 0.00 2.69
3343 3599 3.831715 AAGCGAGCCAAGTATTCAAAC 57.168 42.857 0.00 0.00 0.00 2.93
3344 3600 2.084546 AGCGAGCCAAGTATTCAAACC 58.915 47.619 0.00 0.00 0.00 3.27
3345 3601 1.810151 GCGAGCCAAGTATTCAAACCA 59.190 47.619 0.00 0.00 0.00 3.67
3346 3602 2.423538 GCGAGCCAAGTATTCAAACCAT 59.576 45.455 0.00 0.00 0.00 3.55
3347 3603 3.625764 GCGAGCCAAGTATTCAAACCATA 59.374 43.478 0.00 0.00 0.00 2.74
3348 3604 4.275936 GCGAGCCAAGTATTCAAACCATAT 59.724 41.667 0.00 0.00 0.00 1.78
3349 3605 5.468746 GCGAGCCAAGTATTCAAACCATATA 59.531 40.000 0.00 0.00 0.00 0.86
3350 3606 6.149474 GCGAGCCAAGTATTCAAACCATATAT 59.851 38.462 0.00 0.00 0.00 0.86
3351 3607 7.333423 GCGAGCCAAGTATTCAAACCATATATA 59.667 37.037 0.00 0.00 0.00 0.86
3352 3608 9.383519 CGAGCCAAGTATTCAAACCATATATAT 57.616 33.333 0.00 0.00 0.00 0.86
3424 3680 8.746052 TGGTACCATGATACATTAAAAGGAAG 57.254 34.615 11.60 0.00 0.00 3.46
3425 3681 8.333235 TGGTACCATGATACATTAAAAGGAAGT 58.667 33.333 11.60 0.00 0.00 3.01
3426 3682 9.841295 GGTACCATGATACATTAAAAGGAAGTA 57.159 33.333 7.15 0.00 0.00 2.24
3437 3693 9.965902 ACATTAAAAGGAAGTAATGAGATCACT 57.034 29.630 9.70 0.00 39.17 3.41
3456 3712 9.784531 AGATCACTTGATAATACCATACTTTGG 57.215 33.333 0.00 0.00 42.42 3.28
3458 3714 9.920946 ATCACTTGATAATACCATACTTTGGTT 57.079 29.630 2.11 0.00 44.07 3.67
3472 3728 9.174166 CCATACTTTGGTTGTATAAAGTAAGCT 57.826 33.333 11.98 0.00 46.41 3.74
3505 3761 2.773993 TGCATGAGTGAGCATTCAGA 57.226 45.000 0.00 0.00 35.51 3.27
3506 3762 2.353323 TGCATGAGTGAGCATTCAGAC 58.647 47.619 0.00 0.00 35.51 3.51
3507 3763 2.027469 TGCATGAGTGAGCATTCAGACT 60.027 45.455 0.00 0.00 35.51 3.24
3508 3764 3.196254 TGCATGAGTGAGCATTCAGACTA 59.804 43.478 0.00 0.00 35.51 2.59
3509 3765 4.141779 TGCATGAGTGAGCATTCAGACTAT 60.142 41.667 0.00 0.00 35.51 2.12
3510 3766 4.211584 GCATGAGTGAGCATTCAGACTATG 59.788 45.833 0.00 0.00 32.98 2.23
3511 3767 3.790091 TGAGTGAGCATTCAGACTATGC 58.210 45.455 2.46 2.46 46.78 3.14
3518 3774 3.790091 GCATTCAGACTATGCACTGAGA 58.210 45.455 5.49 0.00 45.93 3.27
3519 3775 3.555139 GCATTCAGACTATGCACTGAGAC 59.445 47.826 5.49 0.00 45.93 3.36
3520 3776 4.752146 CATTCAGACTATGCACTGAGACA 58.248 43.478 5.07 0.00 42.72 3.41
3521 3777 5.358090 CATTCAGACTATGCACTGAGACAT 58.642 41.667 5.07 0.00 42.72 3.06
3522 3778 4.382345 TCAGACTATGCACTGAGACATG 57.618 45.455 0.84 0.00 38.08 3.21
3523 3779 3.766051 TCAGACTATGCACTGAGACATGT 59.234 43.478 0.00 0.00 38.08 3.21
3524 3780 4.949856 TCAGACTATGCACTGAGACATGTA 59.050 41.667 0.00 0.00 38.08 2.29
3525 3781 5.067023 TCAGACTATGCACTGAGACATGTAG 59.933 44.000 0.00 0.00 38.08 2.74
3526 3782 4.047822 GACTATGCACTGAGACATGTAGC 58.952 47.826 0.00 0.00 0.00 3.58
3527 3783 3.448660 ACTATGCACTGAGACATGTAGCA 59.551 43.478 0.00 3.21 34.78 3.49
3528 3784 3.555527 ATGCACTGAGACATGTAGCAT 57.444 42.857 0.00 5.51 36.51 3.79
3529 3785 4.677673 ATGCACTGAGACATGTAGCATA 57.322 40.909 0.00 0.00 39.22 3.14
3530 3786 4.677673 TGCACTGAGACATGTAGCATAT 57.322 40.909 0.00 0.00 0.00 1.78
3531 3787 4.374399 TGCACTGAGACATGTAGCATATG 58.626 43.478 0.00 0.00 0.00 1.78
3532 3788 3.186001 GCACTGAGACATGTAGCATATGC 59.814 47.826 20.36 20.36 42.49 3.14
3533 3789 3.744942 CACTGAGACATGTAGCATATGCC 59.255 47.826 23.96 10.41 43.38 4.40
3534 3790 3.389002 ACTGAGACATGTAGCATATGCCA 59.611 43.478 23.96 15.88 43.38 4.92
3535 3791 4.041321 ACTGAGACATGTAGCATATGCCAT 59.959 41.667 23.96 17.40 43.38 4.40
3536 3792 4.976864 TGAGACATGTAGCATATGCCATT 58.023 39.130 23.96 8.61 43.38 3.16
3537 3793 6.112927 TGAGACATGTAGCATATGCCATTA 57.887 37.500 23.96 7.55 43.38 1.90
3538 3794 6.532826 TGAGACATGTAGCATATGCCATTAA 58.467 36.000 23.96 6.36 43.38 1.40
3539 3795 6.997476 TGAGACATGTAGCATATGCCATTAAA 59.003 34.615 23.96 5.95 43.38 1.52
3540 3796 7.041167 TGAGACATGTAGCATATGCCATTAAAC 60.041 37.037 23.96 12.64 43.38 2.01
3541 3797 6.772233 AGACATGTAGCATATGCCATTAAACA 59.228 34.615 23.96 17.20 43.38 2.83
3542 3798 7.285172 AGACATGTAGCATATGCCATTAAACAA 59.715 33.333 23.96 0.73 43.38 2.83
3543 3799 7.954835 ACATGTAGCATATGCCATTAAACAAT 58.045 30.769 23.96 4.09 43.38 2.71
3544 3800 9.076781 ACATGTAGCATATGCCATTAAACAATA 57.923 29.630 23.96 3.08 43.38 1.90
3545 3801 9.911138 CATGTAGCATATGCCATTAAACAATAA 57.089 29.630 23.96 0.00 43.38 1.40
3555 3811 8.870160 TGCCATTAAACAATAATAATGTGAGC 57.130 30.769 0.00 0.00 37.66 4.26
3556 3812 7.925483 TGCCATTAAACAATAATAATGTGAGCC 59.075 33.333 0.00 0.00 37.66 4.70
3557 3813 8.143835 GCCATTAAACAATAATAATGTGAGCCT 58.856 33.333 0.00 0.00 37.66 4.58
3558 3814 9.683069 CCATTAAACAATAATAATGTGAGCCTC 57.317 33.333 0.00 0.00 37.66 4.70
3562 3818 7.701539 AACAATAATAATGTGAGCCTCAACA 57.298 32.000 0.00 0.00 0.00 3.33
3563 3819 7.886629 ACAATAATAATGTGAGCCTCAACAT 57.113 32.000 0.00 0.00 0.00 2.71
3564 3820 8.297470 ACAATAATAATGTGAGCCTCAACATT 57.703 30.769 19.30 19.30 34.73 2.71
3565 3821 8.752187 ACAATAATAATGTGAGCCTCAACATTT 58.248 29.630 20.06 10.99 33.50 2.32
3568 3824 6.949352 ATAATGTGAGCCTCAACATTTAGG 57.051 37.500 20.06 0.00 33.50 2.69
3569 3825 3.788227 TGTGAGCCTCAACATTTAGGT 57.212 42.857 0.00 0.00 35.16 3.08
3570 3826 4.901197 TGTGAGCCTCAACATTTAGGTA 57.099 40.909 0.00 0.00 35.16 3.08
3571 3827 5.235850 TGTGAGCCTCAACATTTAGGTAA 57.764 39.130 0.00 0.00 35.16 2.85
3572 3828 5.815581 TGTGAGCCTCAACATTTAGGTAAT 58.184 37.500 0.00 0.00 35.16 1.89
3573 3829 6.245408 TGTGAGCCTCAACATTTAGGTAATT 58.755 36.000 0.00 0.00 35.16 1.40
3574 3830 6.150976 TGTGAGCCTCAACATTTAGGTAATTG 59.849 38.462 0.00 0.00 35.16 2.32
3575 3831 6.151144 GTGAGCCTCAACATTTAGGTAATTGT 59.849 38.462 0.00 0.00 35.16 2.71
3576 3832 6.719370 TGAGCCTCAACATTTAGGTAATTGTT 59.281 34.615 0.00 4.81 39.15 2.83
3578 3834 6.493458 AGCCTCAACATTTAGGTAATTGTTGT 59.507 34.615 23.67 11.55 46.68 3.32
3579 3835 7.668052 AGCCTCAACATTTAGGTAATTGTTGTA 59.332 33.333 23.67 15.56 46.68 2.41
3580 3836 8.301002 GCCTCAACATTTAGGTAATTGTTGTAA 58.699 33.333 23.67 13.18 46.68 2.41
3616 3872 4.868450 TGGCAACACGTGTTATATAAGC 57.132 40.909 31.86 27.06 46.17 3.09
3617 3873 4.254492 TGGCAACACGTGTTATATAAGCA 58.746 39.130 31.86 17.02 46.17 3.91
3618 3874 4.093703 TGGCAACACGTGTTATATAAGCAC 59.906 41.667 31.86 21.27 46.17 4.40
3619 3875 4.093703 GGCAACACGTGTTATATAAGCACA 59.906 41.667 31.86 5.66 36.32 4.57
3620 3876 5.391097 GGCAACACGTGTTATATAAGCACAA 60.391 40.000 31.86 0.00 36.32 3.33
3621 3877 6.081049 GCAACACGTGTTATATAAGCACAAA 58.919 36.000 31.86 0.00 36.32 2.83
3622 3878 6.579292 GCAACACGTGTTATATAAGCACAAAA 59.421 34.615 31.86 0.00 36.32 2.44
3623 3879 7.272515 GCAACACGTGTTATATAAGCACAAAAT 59.727 33.333 31.86 2.51 36.32 1.82
3624 3880 9.123709 CAACACGTGTTATATAAGCACAAAATT 57.876 29.630 31.86 2.14 36.32 1.82
3626 3882 9.763465 ACACGTGTTATATAAGCACAAAATTAC 57.237 29.630 17.22 0.00 33.70 1.89
3627 3883 9.217223 CACGTGTTATATAAGCACAAAATTACC 57.783 33.333 7.58 0.00 33.70 2.85
3628 3884 8.948145 ACGTGTTATATAAGCACAAAATTACCA 58.052 29.630 19.28 1.36 33.70 3.25
3629 3885 9.776158 CGTGTTATATAAGCACAAAATTACCAA 57.224 29.630 19.28 0.00 33.70 3.67
3650 3906 6.709018 CAAAGTTTGGAAGGTCCTAAGAAA 57.291 37.500 7.78 0.00 37.46 2.52
3651 3907 6.504398 CAAAGTTTGGAAGGTCCTAAGAAAC 58.496 40.000 7.78 9.88 37.46 2.78
3652 3908 4.726583 AGTTTGGAAGGTCCTAAGAAACC 58.273 43.478 12.66 0.00 37.46 3.27
3653 3909 4.167307 AGTTTGGAAGGTCCTAAGAAACCA 59.833 41.667 12.66 0.00 37.46 3.67
3654 3910 4.799715 TTGGAAGGTCCTAAGAAACCAA 57.200 40.909 0.00 0.00 37.46 3.67
3655 3911 4.367039 TGGAAGGTCCTAAGAAACCAAG 57.633 45.455 0.00 0.00 37.46 3.61
3656 3912 3.977999 TGGAAGGTCCTAAGAAACCAAGA 59.022 43.478 0.00 0.00 37.46 3.02
3657 3913 4.202430 TGGAAGGTCCTAAGAAACCAAGAC 60.202 45.833 0.00 0.00 37.46 3.01
3658 3914 4.202430 GGAAGGTCCTAAGAAACCAAGACA 60.202 45.833 0.00 0.00 38.06 3.41
3659 3915 4.353383 AGGTCCTAAGAAACCAAGACAC 57.647 45.455 0.00 0.00 38.06 3.67
3660 3916 3.974642 AGGTCCTAAGAAACCAAGACACT 59.025 43.478 0.00 0.00 38.06 3.55
3661 3917 4.412528 AGGTCCTAAGAAACCAAGACACTT 59.587 41.667 0.00 0.00 38.06 3.16
3662 3918 5.104067 AGGTCCTAAGAAACCAAGACACTTT 60.104 40.000 0.00 0.00 38.06 2.66
3663 3919 5.593095 GGTCCTAAGAAACCAAGACACTTTT 59.407 40.000 0.00 0.00 35.53 2.27
3664 3920 6.096423 GGTCCTAAGAAACCAAGACACTTTTT 59.904 38.462 0.00 0.00 35.53 1.94
3684 3940 5.982465 TTTTGGCAAAAACTTGATAGTGC 57.018 34.783 22.24 0.00 34.01 4.40
3685 3941 4.662468 TTGGCAAAAACTTGATAGTGCA 57.338 36.364 0.00 0.00 34.01 4.57
3686 3942 3.976169 TGGCAAAAACTTGATAGTGCAC 58.024 40.909 9.40 9.40 34.01 4.57
3687 3943 3.636300 TGGCAAAAACTTGATAGTGCACT 59.364 39.130 25.12 25.12 34.01 4.40
3688 3944 4.824537 TGGCAAAAACTTGATAGTGCACTA 59.175 37.500 27.91 27.91 34.01 2.74
3689 3945 5.300539 TGGCAAAAACTTGATAGTGCACTAA 59.699 36.000 29.26 14.93 34.01 2.24
3690 3946 6.183360 TGGCAAAAACTTGATAGTGCACTAAA 60.183 34.615 29.26 18.78 34.01 1.85
3691 3947 6.699642 GGCAAAAACTTGATAGTGCACTAAAA 59.300 34.615 29.26 23.20 34.01 1.52
3692 3948 7.306574 GGCAAAAACTTGATAGTGCACTAAAAC 60.307 37.037 29.26 21.82 34.01 2.43
3693 3949 7.435192 GCAAAAACTTGATAGTGCACTAAAACT 59.565 33.333 29.26 13.90 34.01 2.66
3694 3950 8.745837 CAAAAACTTGATAGTGCACTAAAACTG 58.254 33.333 29.26 19.31 34.01 3.16
3695 3951 7.801716 AAACTTGATAGTGCACTAAAACTGA 57.198 32.000 29.26 8.24 34.01 3.41
3696 3952 7.801716 AACTTGATAGTGCACTAAAACTGAA 57.198 32.000 29.26 12.93 34.01 3.02
3697 3953 7.426929 ACTTGATAGTGCACTAAAACTGAAG 57.573 36.000 29.26 22.41 31.99 3.02
3698 3954 6.992715 ACTTGATAGTGCACTAAAACTGAAGT 59.007 34.615 29.26 22.99 31.99 3.01
3699 3955 7.171678 ACTTGATAGTGCACTAAAACTGAAGTC 59.828 37.037 29.26 18.52 31.99 3.01
3700 3956 6.521162 TGATAGTGCACTAAAACTGAAGTCA 58.479 36.000 29.26 20.68 31.39 3.41
3701 3957 6.989759 TGATAGTGCACTAAAACTGAAGTCAA 59.010 34.615 29.26 4.60 31.39 3.18
3702 3958 5.485662 AGTGCACTAAAACTGAAGTCAAC 57.514 39.130 20.16 0.00 0.00 3.18
3703 3959 4.335594 AGTGCACTAAAACTGAAGTCAACC 59.664 41.667 20.16 0.00 0.00 3.77
3704 3960 4.095782 GTGCACTAAAACTGAAGTCAACCA 59.904 41.667 10.32 0.00 0.00 3.67
3705 3961 4.702612 TGCACTAAAACTGAAGTCAACCAA 59.297 37.500 0.00 0.00 0.00 3.67
3706 3962 5.184096 TGCACTAAAACTGAAGTCAACCAAA 59.816 36.000 0.00 0.00 0.00 3.28
3707 3963 5.515270 GCACTAAAACTGAAGTCAACCAAAC 59.485 40.000 0.00 0.00 0.00 2.93
3708 3964 6.616947 CACTAAAACTGAAGTCAACCAAACA 58.383 36.000 0.00 0.00 0.00 2.83
3709 3965 7.257722 CACTAAAACTGAAGTCAACCAAACAT 58.742 34.615 0.00 0.00 0.00 2.71
3710 3966 7.759433 CACTAAAACTGAAGTCAACCAAACATT 59.241 33.333 0.00 0.00 0.00 2.71
3711 3967 6.966435 AAAACTGAAGTCAACCAAACATTG 57.034 33.333 0.00 0.00 0.00 2.82
3712 3968 4.045636 ACTGAAGTCAACCAAACATTGC 57.954 40.909 0.00 0.00 0.00 3.56
3713 3969 3.446873 ACTGAAGTCAACCAAACATTGCA 59.553 39.130 0.00 0.00 0.00 4.08
3714 3970 4.044336 TGAAGTCAACCAAACATTGCAG 57.956 40.909 0.00 0.00 0.00 4.41
3715 3971 3.446873 TGAAGTCAACCAAACATTGCAGT 59.553 39.130 0.00 0.00 0.00 4.40
3716 3972 4.081752 TGAAGTCAACCAAACATTGCAGTT 60.082 37.500 0.00 0.00 0.00 3.16
3717 3973 5.126222 TGAAGTCAACCAAACATTGCAGTTA 59.874 36.000 0.00 0.00 0.00 2.24
3718 3974 5.590530 AGTCAACCAAACATTGCAGTTAA 57.409 34.783 0.00 0.00 0.00 2.01
3719 3975 5.971763 AGTCAACCAAACATTGCAGTTAAA 58.028 33.333 0.00 0.00 0.00 1.52
3720 3976 6.402222 AGTCAACCAAACATTGCAGTTAAAA 58.598 32.000 0.00 0.00 0.00 1.52
3721 3977 6.876257 AGTCAACCAAACATTGCAGTTAAAAA 59.124 30.769 0.00 0.00 0.00 1.94
3722 3978 7.552330 AGTCAACCAAACATTGCAGTTAAAAAT 59.448 29.630 0.00 0.00 0.00 1.82
3723 3979 7.850492 GTCAACCAAACATTGCAGTTAAAAATC 59.150 33.333 0.00 0.00 0.00 2.17
3724 3980 7.550551 TCAACCAAACATTGCAGTTAAAAATCA 59.449 29.630 0.00 0.00 0.00 2.57
3725 3981 7.856145 ACCAAACATTGCAGTTAAAAATCAA 57.144 28.000 0.00 0.00 0.00 2.57
3726 3982 7.693020 ACCAAACATTGCAGTTAAAAATCAAC 58.307 30.769 0.00 0.00 0.00 3.18
3727 3983 7.552330 ACCAAACATTGCAGTTAAAAATCAACT 59.448 29.630 0.00 0.00 36.68 3.16
3728 3984 9.039870 CCAAACATTGCAGTTAAAAATCAACTA 57.960 29.630 0.00 0.00 34.50 2.24
3731 3987 9.979578 AACATTGCAGTTAAAAATCAACTATCA 57.020 25.926 0.00 0.00 34.50 2.15
3761 4017 7.198306 ACTAAAAATGTGTTAAGAAGTCCCG 57.802 36.000 0.00 0.00 0.00 5.14
3762 4018 6.993902 ACTAAAAATGTGTTAAGAAGTCCCGA 59.006 34.615 0.00 0.00 0.00 5.14
3763 4019 6.894339 AAAAATGTGTTAAGAAGTCCCGAT 57.106 33.333 0.00 0.00 0.00 4.18
3764 4020 6.894339 AAAATGTGTTAAGAAGTCCCGATT 57.106 33.333 0.00 0.00 0.00 3.34
3765 4021 5.880054 AATGTGTTAAGAAGTCCCGATTG 57.120 39.130 0.00 0.00 0.00 2.67
3766 4022 4.610605 TGTGTTAAGAAGTCCCGATTGA 57.389 40.909 0.00 0.00 0.00 2.57
3767 4023 5.160607 TGTGTTAAGAAGTCCCGATTGAT 57.839 39.130 0.00 0.00 0.00 2.57
3768 4024 5.175859 TGTGTTAAGAAGTCCCGATTGATC 58.824 41.667 0.00 0.00 0.00 2.92
3769 4025 5.175859 GTGTTAAGAAGTCCCGATTGATCA 58.824 41.667 0.00 0.00 0.00 2.92
3770 4026 5.063564 GTGTTAAGAAGTCCCGATTGATCAC 59.936 44.000 0.00 0.00 0.00 3.06
3771 4027 5.046591 TGTTAAGAAGTCCCGATTGATCACT 60.047 40.000 0.00 0.00 0.00 3.41
3772 4028 3.810310 AGAAGTCCCGATTGATCACTC 57.190 47.619 0.00 0.00 0.00 3.51
3773 4029 3.099905 AGAAGTCCCGATTGATCACTCA 58.900 45.455 12.93 0.00 0.00 3.41
3774 4030 3.708631 AGAAGTCCCGATTGATCACTCAT 59.291 43.478 12.93 0.00 0.00 2.90
3775 4031 3.465742 AGTCCCGATTGATCACTCATG 57.534 47.619 12.93 3.72 0.00 3.07
3776 4032 3.033909 AGTCCCGATTGATCACTCATGA 58.966 45.455 12.93 5.81 39.83 3.07
3777 4033 3.126831 GTCCCGATTGATCACTCATGAC 58.873 50.000 12.93 12.93 37.79 3.06
3778 4034 2.765699 TCCCGATTGATCACTCATGACA 59.234 45.455 12.93 0.00 37.79 3.58
3779 4035 3.129109 CCCGATTGATCACTCATGACAG 58.871 50.000 12.93 0.00 37.79 3.51
3780 4036 3.129109 CCGATTGATCACTCATGACAGG 58.871 50.000 12.93 1.76 37.79 4.00
3781 4037 2.543012 CGATTGATCACTCATGACAGGC 59.457 50.000 12.93 0.00 37.79 4.85
3782 4038 2.408271 TTGATCACTCATGACAGGCC 57.592 50.000 0.00 0.00 37.79 5.19
3783 4039 1.576577 TGATCACTCATGACAGGCCT 58.423 50.000 0.00 0.00 37.79 5.19
3784 4040 1.208776 TGATCACTCATGACAGGCCTG 59.791 52.381 31.60 31.60 37.79 4.85
3785 4041 0.107312 ATCACTCATGACAGGCCTGC 60.107 55.000 33.06 24.14 37.79 4.85
3786 4042 1.002990 CACTCATGACAGGCCTGCA 60.003 57.895 33.06 28.64 0.00 4.41
3787 4043 1.025113 CACTCATGACAGGCCTGCAG 61.025 60.000 33.06 20.94 0.00 4.41
3788 4044 1.451567 CTCATGACAGGCCTGCAGG 60.452 63.158 33.06 29.34 38.53 4.85
3789 4045 1.907222 CTCATGACAGGCCTGCAGGA 61.907 60.000 37.21 30.83 37.39 3.86
3790 4046 1.001764 CATGACAGGCCTGCAGGAA 60.002 57.895 37.21 13.93 37.39 3.36
3791 4047 0.609957 CATGACAGGCCTGCAGGAAA 60.610 55.000 37.21 13.89 37.39 3.13
3792 4048 0.323178 ATGACAGGCCTGCAGGAAAG 60.323 55.000 37.21 24.51 37.39 2.62
3793 4049 1.073897 GACAGGCCTGCAGGAAAGT 59.926 57.895 37.21 27.48 37.39 2.66
3794 4050 0.538287 GACAGGCCTGCAGGAAAGTT 60.538 55.000 37.21 15.30 37.39 2.66
3795 4051 0.106015 ACAGGCCTGCAGGAAAGTTT 60.106 50.000 37.21 11.48 37.39 2.66
3796 4052 0.316204 CAGGCCTGCAGGAAAGTTTG 59.684 55.000 37.21 18.41 37.39 2.93
3797 4053 0.106015 AGGCCTGCAGGAAAGTTTGT 60.106 50.000 37.21 7.33 37.39 2.83
3798 4054 0.032540 GGCCTGCAGGAAAGTTTGTG 59.967 55.000 37.21 5.89 37.39 3.33
3799 4055 0.598419 GCCTGCAGGAAAGTTTGTGC 60.598 55.000 37.21 12.75 37.39 4.57
3800 4056 0.032540 CCTGCAGGAAAGTTTGTGCC 59.967 55.000 29.88 1.25 37.39 5.01
3801 4057 0.746063 CTGCAGGAAAGTTTGTGCCA 59.254 50.000 5.57 5.03 34.91 4.92
3802 4058 1.342174 CTGCAGGAAAGTTTGTGCCAT 59.658 47.619 5.57 0.00 34.91 4.40
3803 4059 2.557924 CTGCAGGAAAGTTTGTGCCATA 59.442 45.455 5.57 0.00 34.91 2.74
3804 4060 3.164268 TGCAGGAAAGTTTGTGCCATAT 58.836 40.909 14.20 0.00 34.91 1.78
3805 4061 4.339748 TGCAGGAAAGTTTGTGCCATATA 58.660 39.130 14.20 0.00 34.91 0.86
3806 4062 4.955450 TGCAGGAAAGTTTGTGCCATATAT 59.045 37.500 14.20 0.00 34.91 0.86
3807 4063 6.125719 TGCAGGAAAGTTTGTGCCATATATA 58.874 36.000 14.20 0.00 34.91 0.86
3808 4064 6.039270 TGCAGGAAAGTTTGTGCCATATATAC 59.961 38.462 14.20 0.00 34.91 1.47
3809 4065 6.039270 GCAGGAAAGTTTGTGCCATATATACA 59.961 38.462 7.93 0.00 0.00 2.29
3810 4066 7.416213 GCAGGAAAGTTTGTGCCATATATACAA 60.416 37.037 7.93 0.00 32.93 2.41
3811 4067 8.465999 CAGGAAAGTTTGTGCCATATATACAAA 58.534 33.333 7.80 7.80 40.73 2.83
3812 4068 8.686334 AGGAAAGTTTGTGCCATATATACAAAG 58.314 33.333 11.01 0.00 42.79 2.77
3813 4069 7.435192 GGAAAGTTTGTGCCATATATACAAAGC 59.565 37.037 11.01 7.69 42.79 3.51
3814 4070 7.403312 AAGTTTGTGCCATATATACAAAGCA 57.597 32.000 11.01 2.27 42.79 3.91
3815 4071 7.587037 AGTTTGTGCCATATATACAAAGCAT 57.413 32.000 11.01 1.49 42.79 3.79
3816 4072 8.690203 AGTTTGTGCCATATATACAAAGCATA 57.310 30.769 11.01 1.20 42.79 3.14
3817 4073 8.567948 AGTTTGTGCCATATATACAAAGCATAC 58.432 33.333 11.01 2.97 42.79 2.39
3818 4074 7.447374 TTGTGCCATATATACAAAGCATACC 57.553 36.000 0.00 0.00 31.95 2.73
3819 4075 6.778821 TGTGCCATATATACAAAGCATACCT 58.221 36.000 0.00 0.00 32.11 3.08
3820 4076 7.230747 TGTGCCATATATACAAAGCATACCTT 58.769 34.615 0.00 0.00 34.51 3.50
3821 4077 7.174772 TGTGCCATATATACAAAGCATACCTTG 59.825 37.037 0.00 0.00 33.01 3.61
3822 4078 6.658816 TGCCATATATACAAAGCATACCTTGG 59.341 38.462 0.00 0.00 33.01 3.61
3823 4079 6.659242 GCCATATATACAAAGCATACCTTGGT 59.341 38.462 0.00 0.00 40.78 3.67
3824 4080 7.827236 GCCATATATACAAAGCATACCTTGGTA 59.173 37.037 1.65 1.65 42.63 3.25
3827 4083 9.905713 ATATATACAAAGCATACCTTGGTATGG 57.094 33.333 29.88 19.99 45.85 2.74
3828 4084 4.316025 ACAAAGCATACCTTGGTATGGT 57.684 40.909 28.48 28.48 46.17 3.55
3829 4085 5.444744 ACAAAGCATACCTTGGTATGGTA 57.555 39.130 31.83 11.35 44.27 3.25
3830 4086 5.437060 ACAAAGCATACCTTGGTATGGTAG 58.563 41.667 31.83 28.31 44.27 3.18
3831 4087 5.045140 ACAAAGCATACCTTGGTATGGTAGT 60.045 40.000 31.83 28.76 44.27 2.73
3832 4088 4.957684 AGCATACCTTGGTATGGTAGTC 57.042 45.455 31.12 18.70 43.55 2.59
3833 4089 3.646637 AGCATACCTTGGTATGGTAGTCC 59.353 47.826 31.12 18.16 43.55 3.85
3834 4090 6.347918 AAGCATACCTTGGTATGGTAGTCCA 61.348 44.000 31.83 0.34 44.27 4.02
3835 4091 7.611035 AAGCATACCTTGGTATGGTAGTCCAT 61.611 42.308 31.83 19.24 44.27 3.41
3836 4092 9.015721 AAGCATACCTTGGTATGGTAGTCCATT 62.016 40.741 31.83 18.71 44.27 3.16
3847 4103 4.422057 TGGTAGTCCATTTGTCCTACTCA 58.578 43.478 0.00 0.00 39.03 3.41
3848 4104 4.841813 TGGTAGTCCATTTGTCCTACTCAA 59.158 41.667 0.00 0.00 39.03 3.02
3849 4105 5.487488 TGGTAGTCCATTTGTCCTACTCAAT 59.513 40.000 0.00 0.00 39.03 2.57
3850 4106 6.012858 TGGTAGTCCATTTGTCCTACTCAATT 60.013 38.462 0.00 0.00 39.03 2.32
3851 4107 6.884836 GGTAGTCCATTTGTCCTACTCAATTT 59.115 38.462 0.00 0.00 32.33 1.82
3852 4108 8.044908 GGTAGTCCATTTGTCCTACTCAATTTA 58.955 37.037 0.00 0.00 32.33 1.40
3853 4109 9.444600 GTAGTCCATTTGTCCTACTCAATTTAA 57.555 33.333 0.00 0.00 0.00 1.52
3854 4110 8.567285 AGTCCATTTGTCCTACTCAATTTAAG 57.433 34.615 0.00 0.00 0.00 1.85
3855 4111 8.164070 AGTCCATTTGTCCTACTCAATTTAAGT 58.836 33.333 0.00 0.00 0.00 2.24
3856 4112 8.237267 GTCCATTTGTCCTACTCAATTTAAGTG 58.763 37.037 1.31 0.00 0.00 3.16
3857 4113 7.393234 TCCATTTGTCCTACTCAATTTAAGTGG 59.607 37.037 0.00 0.00 0.00 4.00
3858 4114 7.176690 CCATTTGTCCTACTCAATTTAAGTGGT 59.823 37.037 0.00 0.00 0.00 4.16
3859 4115 7.504924 TTTGTCCTACTCAATTTAAGTGGTG 57.495 36.000 0.00 0.00 0.00 4.17
3860 4116 6.428083 TGTCCTACTCAATTTAAGTGGTGA 57.572 37.500 0.00 0.00 0.00 4.02
3861 4117 7.016153 TGTCCTACTCAATTTAAGTGGTGAT 57.984 36.000 0.00 0.00 0.00 3.06
3862 4118 7.103641 TGTCCTACTCAATTTAAGTGGTGATC 58.896 38.462 0.00 0.00 0.00 2.92
3863 4119 6.255887 GTCCTACTCAATTTAAGTGGTGATCG 59.744 42.308 0.00 0.00 0.00 3.69
3864 4120 6.153851 TCCTACTCAATTTAAGTGGTGATCGA 59.846 38.462 0.00 0.00 0.00 3.59
3865 4121 6.816640 CCTACTCAATTTAAGTGGTGATCGAA 59.183 38.462 0.00 0.00 0.00 3.71
3866 4122 7.495934 CCTACTCAATTTAAGTGGTGATCGAAT 59.504 37.037 0.00 0.00 0.00 3.34
3867 4123 7.076842 ACTCAATTTAAGTGGTGATCGAATG 57.923 36.000 0.00 0.00 0.00 2.67
3868 4124 5.879237 TCAATTTAAGTGGTGATCGAATGC 58.121 37.500 0.00 0.00 0.00 3.56
3869 4125 4.536364 ATTTAAGTGGTGATCGAATGCG 57.464 40.909 0.00 0.00 39.35 4.73
3870 4126 2.665649 TAAGTGGTGATCGAATGCGT 57.334 45.000 0.00 0.00 38.98 5.24
3871 4127 1.359848 AAGTGGTGATCGAATGCGTC 58.640 50.000 0.00 0.00 38.98 5.19
3872 4128 0.246360 AGTGGTGATCGAATGCGTCA 59.754 50.000 0.00 0.00 38.98 4.35
3873 4129 0.647410 GTGGTGATCGAATGCGTCAG 59.353 55.000 0.00 0.00 38.98 3.51
3874 4130 0.246360 TGGTGATCGAATGCGTCAGT 59.754 50.000 0.00 0.00 38.98 3.41
3875 4131 1.474879 TGGTGATCGAATGCGTCAGTA 59.525 47.619 0.00 0.00 38.98 2.74
3876 4132 2.100749 TGGTGATCGAATGCGTCAGTAT 59.899 45.455 0.00 0.00 38.98 2.12
3877 4133 2.726760 GGTGATCGAATGCGTCAGTATC 59.273 50.000 0.00 0.00 38.98 2.24
3878 4134 2.726760 GTGATCGAATGCGTCAGTATCC 59.273 50.000 0.00 0.00 38.98 2.59
3879 4135 2.623416 TGATCGAATGCGTCAGTATCCT 59.377 45.455 0.00 0.00 38.98 3.24
3880 4136 3.818773 TGATCGAATGCGTCAGTATCCTA 59.181 43.478 0.00 0.00 38.98 2.94
3881 4137 4.459337 TGATCGAATGCGTCAGTATCCTAT 59.541 41.667 0.00 0.00 38.98 2.57
3882 4138 4.848562 TCGAATGCGTCAGTATCCTATT 57.151 40.909 0.00 0.00 38.98 1.73
3883 4139 4.795268 TCGAATGCGTCAGTATCCTATTC 58.205 43.478 0.00 0.00 38.98 1.75
3884 4140 3.604198 CGAATGCGTCAGTATCCTATTCG 59.396 47.826 0.00 0.00 39.25 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.150567 CTGCAAGATTCCGAGGAGCG 61.151 60.000 0.00 0.00 34.07 5.03
80 93 2.912025 CCAGCACGGGCAAAACCT 60.912 61.111 14.57 0.00 44.61 3.50
81 94 3.207547 GACCAGCACGGGCAAAACC 62.208 63.158 14.57 0.00 45.64 3.27
95 108 2.970324 GCCAAACACGAGCGACCA 60.970 61.111 0.00 0.00 0.00 4.02
197 231 3.369400 TTGCCACCGGAAATGCGG 61.369 61.111 9.46 12.03 0.00 5.69
241 275 4.461992 TTGTACTAAACAAAGACGCTGC 57.538 40.909 0.00 0.00 45.11 5.25
289 326 5.726397 TGACAATACGTAGCCATACTGTTT 58.274 37.500 0.08 0.00 0.00 2.83
342 379 3.357079 CCCATCGGCTAATGCGCC 61.357 66.667 4.18 0.00 46.68 6.53
410 457 1.302832 GTCTCTGGTTGGTGGGCAG 60.303 63.158 0.00 0.00 0.00 4.85
551 606 1.919956 GAGGAAGAACTCGTCGGCGA 61.920 60.000 13.29 13.29 45.79 5.54
552 607 1.514443 GAGGAAGAACTCGTCGGCG 60.514 63.158 1.15 1.15 39.92 6.46
553 608 4.480031 GAGGAAGAACTCGTCGGC 57.520 61.111 0.00 0.00 0.00 5.54
559 614 0.456221 TCGATGCCGAGGAAGAACTC 59.544 55.000 0.00 0.00 40.30 3.01
560 615 0.173708 GTCGATGCCGAGGAAGAACT 59.826 55.000 0.00 0.00 46.52 3.01
561 616 2.666989 GTCGATGCCGAGGAAGAAC 58.333 57.895 0.00 0.00 46.52 3.01
569 624 3.872728 CGTCCTCGTCGATGCCGA 61.873 66.667 0.00 0.00 43.35 5.54
570 625 4.907034 CCGTCCTCGTCGATGCCG 62.907 72.222 0.00 0.00 35.01 5.69
573 628 4.570663 GGGCCGTCCTCGTCGATG 62.571 72.222 0.00 0.00 35.01 3.84
604 659 0.263468 AAGGAGAGGTAGGAGGGCTC 59.737 60.000 0.00 0.00 0.00 4.70
605 660 0.263468 GAAGGAGAGGTAGGAGGGCT 59.737 60.000 0.00 0.00 0.00 5.19
606 661 0.263468 AGAAGGAGAGGTAGGAGGGC 59.737 60.000 0.00 0.00 0.00 5.19
607 662 1.133294 GGAGAAGGAGAGGTAGGAGGG 60.133 61.905 0.00 0.00 0.00 4.30
608 663 1.477923 CGGAGAAGGAGAGGTAGGAGG 60.478 61.905 0.00 0.00 0.00 4.30
609 664 1.491332 TCGGAGAAGGAGAGGTAGGAG 59.509 57.143 0.00 0.00 0.00 3.69
610 665 1.212441 GTCGGAGAAGGAGAGGTAGGA 59.788 57.143 0.00 0.00 39.69 2.94
611 666 1.682740 GTCGGAGAAGGAGAGGTAGG 58.317 60.000 0.00 0.00 39.69 3.18
612 667 1.301423 CGTCGGAGAAGGAGAGGTAG 58.699 60.000 0.00 0.00 39.69 3.18
613 668 0.747283 GCGTCGGAGAAGGAGAGGTA 60.747 60.000 0.00 0.00 39.69 3.08
614 669 2.047443 GCGTCGGAGAAGGAGAGGT 61.047 63.158 0.00 0.00 39.69 3.85
615 670 2.776913 GGCGTCGGAGAAGGAGAGG 61.777 68.421 0.00 0.00 39.69 3.69
616 671 1.316706 AAGGCGTCGGAGAAGGAGAG 61.317 60.000 0.00 0.00 39.69 3.20
617 672 1.304217 AAGGCGTCGGAGAAGGAGA 60.304 57.895 0.00 0.00 39.69 3.71
618 673 1.139947 GAAGGCGTCGGAGAAGGAG 59.860 63.158 0.00 0.00 39.69 3.69
619 674 2.697761 CGAAGGCGTCGGAGAAGGA 61.698 63.158 15.14 0.00 46.45 3.36
620 675 2.202623 CGAAGGCGTCGGAGAAGG 60.203 66.667 15.14 0.00 46.45 3.46
628 683 2.776913 CCTCCTCCTCGAAGGCGTC 61.777 68.421 0.00 0.00 38.98 5.19
629 684 2.756283 CCTCCTCCTCGAAGGCGT 60.756 66.667 0.00 0.00 38.98 5.68
630 685 2.440430 TCCTCCTCCTCGAAGGCG 60.440 66.667 0.00 0.00 36.29 5.52
631 686 2.791868 GCTCCTCCTCCTCGAAGGC 61.792 68.421 0.00 0.00 36.29 4.35
632 687 1.380515 TGCTCCTCCTCCTCGAAGG 60.381 63.158 0.00 0.00 37.81 3.46
633 688 1.671901 GGTGCTCCTCCTCCTCGAAG 61.672 65.000 0.00 0.00 0.00 3.79
634 689 1.682684 GGTGCTCCTCCTCCTCGAA 60.683 63.158 0.00 0.00 0.00 3.71
635 690 2.043852 GGTGCTCCTCCTCCTCGA 60.044 66.667 0.00 0.00 0.00 4.04
636 691 2.363018 TGGTGCTCCTCCTCCTCG 60.363 66.667 6.34 0.00 34.23 4.63
637 692 0.907230 AAGTGGTGCTCCTCCTCCTC 60.907 60.000 6.34 0.00 34.23 3.71
638 693 0.907230 GAAGTGGTGCTCCTCCTCCT 60.907 60.000 6.34 0.00 34.23 3.69
639 694 1.194781 TGAAGTGGTGCTCCTCCTCC 61.195 60.000 6.34 0.00 34.23 4.30
640 695 0.036858 GTGAAGTGGTGCTCCTCCTC 60.037 60.000 6.34 2.60 34.23 3.71
641 696 1.484444 GGTGAAGTGGTGCTCCTCCT 61.484 60.000 6.34 0.00 34.23 3.69
642 697 1.003233 GGTGAAGTGGTGCTCCTCC 60.003 63.158 6.34 0.00 34.23 4.30
643 698 1.003233 GGGTGAAGTGGTGCTCCTC 60.003 63.158 6.34 2.30 34.23 3.71
644 699 1.770110 TGGGTGAAGTGGTGCTCCT 60.770 57.895 6.34 0.00 34.23 3.69
645 700 1.600916 GTGGGTGAAGTGGTGCTCC 60.601 63.158 0.00 0.00 0.00 4.70
646 701 0.603975 GAGTGGGTGAAGTGGTGCTC 60.604 60.000 0.00 0.00 0.00 4.26
647 702 1.451936 GAGTGGGTGAAGTGGTGCT 59.548 57.895 0.00 0.00 0.00 4.40
648 703 1.600916 GGAGTGGGTGAAGTGGTGC 60.601 63.158 0.00 0.00 0.00 5.01
649 704 1.301716 CGGAGTGGGTGAAGTGGTG 60.302 63.158 0.00 0.00 0.00 4.17
650 705 1.458777 TCGGAGTGGGTGAAGTGGT 60.459 57.895 0.00 0.00 0.00 4.16
651 706 1.004918 GTCGGAGTGGGTGAAGTGG 60.005 63.158 0.00 0.00 0.00 4.00
652 707 0.321671 ATGTCGGAGTGGGTGAAGTG 59.678 55.000 0.00 0.00 0.00 3.16
653 708 0.608640 GATGTCGGAGTGGGTGAAGT 59.391 55.000 0.00 0.00 0.00 3.01
654 709 0.898320 AGATGTCGGAGTGGGTGAAG 59.102 55.000 0.00 0.00 0.00 3.02
655 710 0.895530 GAGATGTCGGAGTGGGTGAA 59.104 55.000 0.00 0.00 0.00 3.18
656 711 0.970937 GGAGATGTCGGAGTGGGTGA 60.971 60.000 0.00 0.00 0.00 4.02
657 712 1.517832 GGAGATGTCGGAGTGGGTG 59.482 63.158 0.00 0.00 0.00 4.61
658 713 1.686110 GGGAGATGTCGGAGTGGGT 60.686 63.158 0.00 0.00 0.00 4.51
659 714 2.435693 GGGGAGATGTCGGAGTGGG 61.436 68.421 0.00 0.00 0.00 4.61
660 715 3.221222 GGGGAGATGTCGGAGTGG 58.779 66.667 0.00 0.00 0.00 4.00
1758 1840 2.047274 ATCCCGTCCTTGCACACG 60.047 61.111 5.27 5.27 35.72 4.49
2016 2098 4.399303 GGTTTCTCACATAACTTGGATGGG 59.601 45.833 0.00 0.00 0.00 4.00
2054 2136 1.134699 TCCAAGCATCCTAACTGAGCG 60.135 52.381 0.00 0.00 0.00 5.03
2112 2194 4.081420 AGTTCAGAACCGCTACATCAATCT 60.081 41.667 9.85 0.00 0.00 2.40
2475 2693 6.249035 TGTGTGCTAATTAAAACCTACAGC 57.751 37.500 0.00 0.00 0.00 4.40
2604 2822 0.804989 CAACTCCCAATCGGAACAGC 59.195 55.000 0.00 0.00 41.40 4.40
2666 2884 9.944376 AGAAACTTATCTGTATTACTGAAGCAA 57.056 29.630 7.39 2.91 29.93 3.91
2684 2902 7.929785 ACAAGATTTCGGTGACTAAGAAACTTA 59.070 33.333 4.29 0.00 36.81 2.24
2711 2929 7.554835 AGTTCTGTCACAACCAATACAAAGTAA 59.445 33.333 0.00 0.00 0.00 2.24
2714 2932 6.377327 AGTTCTGTCACAACCAATACAAAG 57.623 37.500 0.00 0.00 0.00 2.77
2730 2948 2.289506 GGCCGGTAGAAGAAAGTTCTGT 60.290 50.000 1.90 0.00 37.65 3.41
2747 2965 0.727398 GTAAGCAAAGCAGTAGGCCG 59.273 55.000 0.00 0.00 46.50 6.13
2994 3236 3.531262 GTTTGGTACTGCTAAACACCG 57.469 47.619 1.94 0.00 44.65 4.94
3092 3334 5.046735 CACAATGATCTACTCCCTCCATAGG 60.047 48.000 0.00 0.00 43.25 2.57
3093 3335 5.568423 GCACAATGATCTACTCCCTCCATAG 60.568 48.000 0.00 0.00 0.00 2.23
3094 3336 4.284490 GCACAATGATCTACTCCCTCCATA 59.716 45.833 0.00 0.00 0.00 2.74
3095 3337 3.072184 GCACAATGATCTACTCCCTCCAT 59.928 47.826 0.00 0.00 0.00 3.41
3096 3338 2.435805 GCACAATGATCTACTCCCTCCA 59.564 50.000 0.00 0.00 0.00 3.86
3097 3339 2.703007 AGCACAATGATCTACTCCCTCC 59.297 50.000 0.00 0.00 0.00 4.30
3098 3340 3.386078 TCAGCACAATGATCTACTCCCTC 59.614 47.826 0.00 0.00 0.00 4.30
3099 3341 3.378512 TCAGCACAATGATCTACTCCCT 58.621 45.455 0.00 0.00 0.00 4.20
3100 3342 3.827008 TCAGCACAATGATCTACTCCC 57.173 47.619 0.00 0.00 0.00 4.30
3101 3343 5.181748 ACTTTCAGCACAATGATCTACTCC 58.818 41.667 0.00 0.00 0.00 3.85
3102 3344 5.871524 TGACTTTCAGCACAATGATCTACTC 59.128 40.000 0.00 0.00 0.00 2.59
3103 3345 5.798132 TGACTTTCAGCACAATGATCTACT 58.202 37.500 0.00 0.00 0.00 2.57
3104 3346 6.073058 TGTTGACTTTCAGCACAATGATCTAC 60.073 38.462 0.00 0.00 32.63 2.59
3105 3347 5.997129 TGTTGACTTTCAGCACAATGATCTA 59.003 36.000 0.00 0.00 32.63 1.98
3247 3503 2.050350 CCAGCATGTTCCCTGCAGG 61.050 63.158 26.87 26.87 42.15 4.85
3287 3543 1.883084 GGCGCAACGGGTCATCTAG 60.883 63.158 10.83 0.00 0.00 2.43
3288 3544 2.185867 GGCGCAACGGGTCATCTA 59.814 61.111 10.83 0.00 0.00 1.98
3289 3545 4.778143 GGGCGCAACGGGTCATCT 62.778 66.667 10.83 0.00 0.00 2.90
3290 3546 2.933878 TATGGGCGCAACGGGTCATC 62.934 60.000 10.83 0.00 0.00 2.92
3291 3547 2.940890 CTATGGGCGCAACGGGTCAT 62.941 60.000 10.83 3.58 0.00 3.06
3292 3548 3.673956 CTATGGGCGCAACGGGTCA 62.674 63.158 10.83 0.00 0.00 4.02
3293 3549 2.895372 CTATGGGCGCAACGGGTC 60.895 66.667 10.83 0.00 0.00 4.46
3303 3559 0.389687 TTGCTTTTTGCGCTATGGGC 60.390 50.000 9.73 8.59 46.63 5.36
3304 3560 2.077413 TTTGCTTTTTGCGCTATGGG 57.923 45.000 9.73 0.00 46.63 4.00
3305 3561 2.159801 GCTTTTGCTTTTTGCGCTATGG 60.160 45.455 9.73 0.00 46.63 2.74
3306 3562 2.471103 CGCTTTTGCTTTTTGCGCTATG 60.471 45.455 9.73 0.00 46.63 2.23
3307 3563 1.720852 CGCTTTTGCTTTTTGCGCTAT 59.279 42.857 9.73 0.00 46.63 2.97
3308 3564 1.127701 CGCTTTTGCTTTTTGCGCTA 58.872 45.000 9.73 0.00 46.63 4.26
3309 3565 0.527385 TCGCTTTTGCTTTTTGCGCT 60.527 45.000 9.73 0.00 46.63 5.92
3310 3566 0.111574 CTCGCTTTTGCTTTTTGCGC 60.112 50.000 0.00 0.00 46.63 6.09
3311 3567 0.111574 GCTCGCTTTTGCTTTTTGCG 60.112 50.000 0.00 0.00 46.63 4.85
3312 3568 0.233074 GGCTCGCTTTTGCTTTTTGC 59.767 50.000 0.00 0.00 44.80 3.68
3313 3569 1.569708 TGGCTCGCTTTTGCTTTTTG 58.430 45.000 0.00 0.00 44.80 2.44
3314 3570 2.204237 CTTGGCTCGCTTTTGCTTTTT 58.796 42.857 0.00 0.00 44.80 1.94
3315 3571 1.136891 ACTTGGCTCGCTTTTGCTTTT 59.863 42.857 0.00 0.00 44.80 2.27
3316 3572 0.746659 ACTTGGCTCGCTTTTGCTTT 59.253 45.000 0.00 0.00 44.80 3.51
3317 3573 1.604604 TACTTGGCTCGCTTTTGCTT 58.395 45.000 0.00 0.00 44.80 3.91
3318 3574 1.826385 ATACTTGGCTCGCTTTTGCT 58.174 45.000 0.00 0.00 44.80 3.91
3319 3575 2.095263 TGAATACTTGGCTCGCTTTTGC 60.095 45.455 0.00 0.00 43.23 3.68
3320 3576 3.829886 TGAATACTTGGCTCGCTTTTG 57.170 42.857 0.00 0.00 0.00 2.44
3321 3577 4.546570 GTTTGAATACTTGGCTCGCTTTT 58.453 39.130 0.00 0.00 0.00 2.27
3322 3578 3.057526 GGTTTGAATACTTGGCTCGCTTT 60.058 43.478 0.00 0.00 0.00 3.51
3323 3579 2.488153 GGTTTGAATACTTGGCTCGCTT 59.512 45.455 0.00 0.00 0.00 4.68
3324 3580 2.084546 GGTTTGAATACTTGGCTCGCT 58.915 47.619 0.00 0.00 0.00 4.93
3325 3581 1.810151 TGGTTTGAATACTTGGCTCGC 59.190 47.619 0.00 0.00 0.00 5.03
3326 3582 7.672983 ATATATGGTTTGAATACTTGGCTCG 57.327 36.000 0.00 0.00 0.00 5.03
3398 3654 9.354673 CTTCCTTTTAATGTATCATGGTACCAT 57.645 33.333 22.23 22.23 37.08 3.55
3399 3655 8.333235 ACTTCCTTTTAATGTATCATGGTACCA 58.667 33.333 18.99 18.99 0.00 3.25
3400 3656 8.747538 ACTTCCTTTTAATGTATCATGGTACC 57.252 34.615 13.58 4.43 0.00 3.34
3411 3667 9.965902 AGTGATCTCATTACTTCCTTTTAATGT 57.034 29.630 0.00 0.00 37.11 2.71
3430 3686 9.784531 CCAAAGTATGGTATTATCAAGTGATCT 57.215 33.333 0.00 0.00 44.85 2.75
3479 3735 2.099263 ATGCTCACTCATGCATCTTTGC 59.901 45.455 0.00 0.00 45.50 3.68
3486 3742 2.027469 AGTCTGAATGCTCACTCATGCA 60.027 45.455 0.00 0.00 43.67 3.96
3487 3743 2.630158 AGTCTGAATGCTCACTCATGC 58.370 47.619 0.00 0.00 0.00 4.06
3488 3744 4.211584 GCATAGTCTGAATGCTCACTCATG 59.788 45.833 6.99 0.00 45.05 3.07
3489 3745 4.378774 GCATAGTCTGAATGCTCACTCAT 58.621 43.478 6.99 0.00 45.05 2.90
3490 3746 3.790091 GCATAGTCTGAATGCTCACTCA 58.210 45.455 6.99 0.00 45.05 3.41
3498 3754 4.752146 TGTCTCAGTGCATAGTCTGAATG 58.248 43.478 6.26 0.00 39.67 2.67
3499 3755 5.105023 ACATGTCTCAGTGCATAGTCTGAAT 60.105 40.000 6.26 0.00 39.67 2.57
3500 3756 4.221482 ACATGTCTCAGTGCATAGTCTGAA 59.779 41.667 6.26 0.00 39.67 3.02
3501 3757 3.766051 ACATGTCTCAGTGCATAGTCTGA 59.234 43.478 4.83 4.83 38.20 3.27
3502 3758 4.120792 ACATGTCTCAGTGCATAGTCTG 57.879 45.455 0.00 0.00 0.00 3.51
3503 3759 4.202101 GCTACATGTCTCAGTGCATAGTCT 60.202 45.833 0.00 0.00 0.00 3.24
3504 3760 4.047822 GCTACATGTCTCAGTGCATAGTC 58.952 47.826 0.00 0.00 0.00 2.59
3505 3761 3.448660 TGCTACATGTCTCAGTGCATAGT 59.551 43.478 0.00 0.00 0.00 2.12
3506 3762 4.050852 TGCTACATGTCTCAGTGCATAG 57.949 45.455 0.00 0.00 0.00 2.23
3507 3763 4.677673 ATGCTACATGTCTCAGTGCATA 57.322 40.909 0.00 0.00 37.81 3.14
3508 3764 3.555527 ATGCTACATGTCTCAGTGCAT 57.444 42.857 0.00 7.49 35.25 3.96
3509 3765 4.374399 CATATGCTACATGTCTCAGTGCA 58.626 43.478 0.00 5.38 0.00 4.57
3510 3766 3.186001 GCATATGCTACATGTCTCAGTGC 59.814 47.826 20.64 12.02 38.21 4.40
3511 3767 3.744942 GGCATATGCTACATGTCTCAGTG 59.255 47.826 26.12 6.38 41.70 3.66
3512 3768 3.389002 TGGCATATGCTACATGTCTCAGT 59.611 43.478 26.12 0.00 41.70 3.41
3513 3769 3.999046 TGGCATATGCTACATGTCTCAG 58.001 45.455 26.12 0.00 41.70 3.35
3514 3770 4.628963 ATGGCATATGCTACATGTCTCA 57.371 40.909 26.12 12.98 41.70 3.27
3515 3771 7.041167 TGTTTAATGGCATATGCTACATGTCTC 60.041 37.037 26.12 13.53 41.70 3.36
3516 3772 6.772233 TGTTTAATGGCATATGCTACATGTCT 59.228 34.615 26.12 10.35 41.70 3.41
3517 3773 6.969366 TGTTTAATGGCATATGCTACATGTC 58.031 36.000 26.12 12.57 41.70 3.06
3518 3774 6.957920 TGTTTAATGGCATATGCTACATGT 57.042 33.333 26.12 2.69 41.70 3.21
3519 3775 9.911138 TTATTGTTTAATGGCATATGCTACATG 57.089 29.630 26.12 0.00 41.70 3.21
3529 3785 9.480053 GCTCACATTATTATTGTTTAATGGCAT 57.520 29.630 0.00 0.00 39.19 4.40
3530 3786 7.925483 GGCTCACATTATTATTGTTTAATGGCA 59.075 33.333 0.00 0.00 39.19 4.92
3531 3787 8.143835 AGGCTCACATTATTATTGTTTAATGGC 58.856 33.333 7.38 2.36 39.19 4.40
3532 3788 9.683069 GAGGCTCACATTATTATTGTTTAATGG 57.317 33.333 10.25 0.00 39.19 3.16
3536 3792 9.237187 TGTTGAGGCTCACATTATTATTGTTTA 57.763 29.630 18.55 0.00 0.00 2.01
3537 3793 8.121305 TGTTGAGGCTCACATTATTATTGTTT 57.879 30.769 18.55 0.00 0.00 2.83
3538 3794 7.701539 TGTTGAGGCTCACATTATTATTGTT 57.298 32.000 18.55 0.00 0.00 2.83
3539 3795 7.886629 ATGTTGAGGCTCACATTATTATTGT 57.113 32.000 18.55 0.00 0.00 2.71
3542 3798 9.071276 CCTAAATGTTGAGGCTCACATTATTAT 57.929 33.333 28.85 21.15 32.21 1.28
3543 3799 8.052748 ACCTAAATGTTGAGGCTCACATTATTA 58.947 33.333 28.85 21.78 36.17 0.98
3544 3800 6.891908 ACCTAAATGTTGAGGCTCACATTATT 59.108 34.615 28.85 21.81 36.17 1.40
3545 3801 6.426587 ACCTAAATGTTGAGGCTCACATTAT 58.573 36.000 28.85 23.18 36.17 1.28
3546 3802 5.815581 ACCTAAATGTTGAGGCTCACATTA 58.184 37.500 28.85 19.57 36.17 1.90
3547 3803 4.666512 ACCTAAATGTTGAGGCTCACATT 58.333 39.130 25.89 25.89 36.17 2.71
3548 3804 4.307032 ACCTAAATGTTGAGGCTCACAT 57.693 40.909 18.55 19.44 36.17 3.21
3549 3805 3.788227 ACCTAAATGTTGAGGCTCACA 57.212 42.857 18.55 18.08 36.17 3.58
3550 3806 6.151144 ACAATTACCTAAATGTTGAGGCTCAC 59.849 38.462 18.55 12.93 36.17 3.51
3551 3807 6.245408 ACAATTACCTAAATGTTGAGGCTCA 58.755 36.000 14.43 14.43 36.17 4.26
3552 3808 6.759497 ACAATTACCTAAATGTTGAGGCTC 57.241 37.500 7.79 7.79 36.17 4.70
3553 3809 6.493458 ACAACAATTACCTAAATGTTGAGGCT 59.507 34.615 23.59 6.88 38.02 4.58
3554 3810 6.687604 ACAACAATTACCTAAATGTTGAGGC 58.312 36.000 23.59 0.00 38.02 4.70
3572 3828 8.410141 GCCACTTTATGCCTAATATTACAACAA 58.590 33.333 0.00 0.00 0.00 2.83
3573 3829 7.558081 TGCCACTTTATGCCTAATATTACAACA 59.442 33.333 0.00 0.00 0.00 3.33
3574 3830 7.936584 TGCCACTTTATGCCTAATATTACAAC 58.063 34.615 0.00 0.00 0.00 3.32
3575 3831 8.410141 GTTGCCACTTTATGCCTAATATTACAA 58.590 33.333 0.00 0.00 0.00 2.41
3576 3832 7.558081 TGTTGCCACTTTATGCCTAATATTACA 59.442 33.333 0.00 0.00 0.00 2.41
3577 3833 7.860872 GTGTTGCCACTTTATGCCTAATATTAC 59.139 37.037 0.00 0.00 38.61 1.89
3578 3834 7.254966 CGTGTTGCCACTTTATGCCTAATATTA 60.255 37.037 0.00 0.00 39.55 0.98
3579 3835 6.459573 CGTGTTGCCACTTTATGCCTAATATT 60.460 38.462 0.00 0.00 39.55 1.28
3580 3836 5.008613 CGTGTTGCCACTTTATGCCTAATAT 59.991 40.000 0.00 0.00 39.55 1.28
3581 3837 4.334203 CGTGTTGCCACTTTATGCCTAATA 59.666 41.667 0.00 0.00 39.55 0.98
3582 3838 3.128589 CGTGTTGCCACTTTATGCCTAAT 59.871 43.478 0.00 0.00 39.55 1.73
3583 3839 2.486203 CGTGTTGCCACTTTATGCCTAA 59.514 45.455 0.00 0.00 39.55 2.69
3584 3840 2.080693 CGTGTTGCCACTTTATGCCTA 58.919 47.619 0.00 0.00 39.55 3.93
3585 3841 0.881118 CGTGTTGCCACTTTATGCCT 59.119 50.000 0.00 0.00 39.55 4.75
3586 3842 0.596082 ACGTGTTGCCACTTTATGCC 59.404 50.000 0.00 0.00 39.55 4.40
3587 3843 1.001815 ACACGTGTTGCCACTTTATGC 60.002 47.619 17.22 0.00 39.55 3.14
3588 3844 3.347958 AACACGTGTTGCCACTTTATG 57.652 42.857 31.87 0.00 39.55 1.90
3589 3845 6.995511 ATATAACACGTGTTGCCACTTTAT 57.004 33.333 37.43 24.14 39.55 1.40
3590 3846 7.413219 GCTTATATAACACGTGTTGCCACTTTA 60.413 37.037 37.43 19.53 39.55 1.85
3591 3847 6.622028 GCTTATATAACACGTGTTGCCACTTT 60.622 38.462 37.43 16.32 39.55 2.66
3592 3848 5.163794 GCTTATATAACACGTGTTGCCACTT 60.164 40.000 37.43 20.35 39.55 3.16
3593 3849 4.331717 GCTTATATAACACGTGTTGCCACT 59.668 41.667 37.43 21.41 39.55 4.00
3594 3850 4.093703 TGCTTATATAACACGTGTTGCCAC 59.906 41.667 37.43 21.84 38.90 5.01
3595 3851 4.093703 GTGCTTATATAACACGTGTTGCCA 59.906 41.667 37.43 24.10 38.90 4.92
3596 3852 4.093703 TGTGCTTATATAACACGTGTTGCC 59.906 41.667 37.43 24.11 38.90 4.52
3597 3853 5.211266 TGTGCTTATATAACACGTGTTGC 57.789 39.130 37.43 30.28 38.90 4.17
3598 3854 8.667987 ATTTTGTGCTTATATAACACGTGTTG 57.332 30.769 37.43 23.20 38.90 3.33
3600 3856 9.763465 GTAATTTTGTGCTTATATAACACGTGT 57.237 29.630 17.22 17.22 37.11 4.49
3601 3857 9.217223 GGTAATTTTGTGCTTATATAACACGTG 57.783 33.333 15.48 15.48 37.11 4.49
3602 3858 8.948145 TGGTAATTTTGTGCTTATATAACACGT 58.052 29.630 16.48 0.00 37.11 4.49
3603 3859 9.776158 TTGGTAATTTTGTGCTTATATAACACG 57.224 29.630 16.48 0.00 37.11 4.49
3610 3866 9.482627 CCAAACTTTGGTAATTTTGTGCTTATA 57.517 29.630 11.92 0.00 45.93 0.98
3611 3867 8.376889 CCAAACTTTGGTAATTTTGTGCTTAT 57.623 30.769 11.92 0.00 45.93 1.73
3612 3868 7.778470 CCAAACTTTGGTAATTTTGTGCTTA 57.222 32.000 11.92 0.00 45.93 3.09
3613 3869 6.676237 CCAAACTTTGGTAATTTTGTGCTT 57.324 33.333 11.92 0.00 45.93 3.91
3626 3882 9.296329 GGTTTCTTAGGACCTTCCAAACTTTGG 62.296 44.444 13.72 13.72 39.61 3.28
3627 3883 6.461092 GGTTTCTTAGGACCTTCCAAACTTTG 60.461 42.308 0.00 0.00 39.61 2.77
3628 3884 5.597182 GGTTTCTTAGGACCTTCCAAACTTT 59.403 40.000 0.00 0.00 39.61 2.66
3629 3885 5.138276 GGTTTCTTAGGACCTTCCAAACTT 58.862 41.667 0.00 0.00 39.61 2.66
3630 3886 4.167307 TGGTTTCTTAGGACCTTCCAAACT 59.833 41.667 0.00 0.00 39.61 2.66
3631 3887 4.466827 TGGTTTCTTAGGACCTTCCAAAC 58.533 43.478 0.00 6.34 39.61 2.93
3632 3888 4.799715 TGGTTTCTTAGGACCTTCCAAA 57.200 40.909 0.00 0.00 39.61 3.28
3633 3889 4.414182 TCTTGGTTTCTTAGGACCTTCCAA 59.586 41.667 0.00 5.26 39.61 3.53
3634 3890 3.977999 TCTTGGTTTCTTAGGACCTTCCA 59.022 43.478 0.00 0.00 39.61 3.53
3635 3891 4.202430 TGTCTTGGTTTCTTAGGACCTTCC 60.202 45.833 0.00 0.00 36.86 3.46
3636 3892 4.755629 GTGTCTTGGTTTCTTAGGACCTTC 59.244 45.833 0.00 0.00 36.86 3.46
3637 3893 4.412528 AGTGTCTTGGTTTCTTAGGACCTT 59.587 41.667 0.00 0.00 36.86 3.50
3638 3894 3.974642 AGTGTCTTGGTTTCTTAGGACCT 59.025 43.478 0.00 0.00 36.86 3.85
3639 3895 4.353383 AGTGTCTTGGTTTCTTAGGACC 57.647 45.455 0.00 0.00 36.45 4.46
3640 3896 6.694877 AAAAGTGTCTTGGTTTCTTAGGAC 57.305 37.500 0.00 0.00 0.00 3.85
3661 3917 5.877012 TGCACTATCAAGTTTTTGCCAAAAA 59.123 32.000 11.16 11.16 37.99 1.94
3662 3918 5.293079 GTGCACTATCAAGTTTTTGCCAAAA 59.707 36.000 10.32 0.00 31.97 2.44
3663 3919 4.808364 GTGCACTATCAAGTTTTTGCCAAA 59.192 37.500 10.32 0.00 31.97 3.28
3664 3920 4.099266 AGTGCACTATCAAGTTTTTGCCAA 59.901 37.500 20.16 0.00 31.97 4.52
3665 3921 3.636300 AGTGCACTATCAAGTTTTTGCCA 59.364 39.130 20.16 0.00 31.97 4.92
3666 3922 4.243007 AGTGCACTATCAAGTTTTTGCC 57.757 40.909 20.16 0.00 31.97 4.52
3667 3923 7.435192 AGTTTTAGTGCACTATCAAGTTTTTGC 59.565 33.333 26.54 9.29 31.97 3.68
3668 3924 8.745837 CAGTTTTAGTGCACTATCAAGTTTTTG 58.254 33.333 26.54 11.71 31.97 2.44
3669 3925 8.682710 TCAGTTTTAGTGCACTATCAAGTTTTT 58.317 29.630 26.54 0.00 31.97 1.94
3670 3926 8.220755 TCAGTTTTAGTGCACTATCAAGTTTT 57.779 30.769 26.54 5.59 31.97 2.43
3671 3927 7.801716 TCAGTTTTAGTGCACTATCAAGTTT 57.198 32.000 26.54 9.02 31.97 2.66
3672 3928 7.499232 ACTTCAGTTTTAGTGCACTATCAAGTT 59.501 33.333 26.54 11.11 31.97 2.66
3673 3929 6.992715 ACTTCAGTTTTAGTGCACTATCAAGT 59.007 34.615 26.54 20.30 35.91 3.16
3674 3930 7.171508 TGACTTCAGTTTTAGTGCACTATCAAG 59.828 37.037 26.54 20.52 0.00 3.02
3675 3931 6.989759 TGACTTCAGTTTTAGTGCACTATCAA 59.010 34.615 26.54 18.78 0.00 2.57
3676 3932 6.521162 TGACTTCAGTTTTAGTGCACTATCA 58.479 36.000 26.54 19.45 0.00 2.15
3677 3933 7.291567 GTTGACTTCAGTTTTAGTGCACTATC 58.708 38.462 26.54 17.26 0.00 2.08
3678 3934 6.204882 GGTTGACTTCAGTTTTAGTGCACTAT 59.795 38.462 26.54 9.64 0.00 2.12
3679 3935 5.526111 GGTTGACTTCAGTTTTAGTGCACTA 59.474 40.000 22.67 22.67 0.00 2.74
3680 3936 4.335594 GGTTGACTTCAGTTTTAGTGCACT 59.664 41.667 25.12 25.12 0.00 4.40
3681 3937 4.095782 TGGTTGACTTCAGTTTTAGTGCAC 59.904 41.667 9.40 9.40 0.00 4.57
3682 3938 4.265893 TGGTTGACTTCAGTTTTAGTGCA 58.734 39.130 0.00 0.00 0.00 4.57
3683 3939 4.893424 TGGTTGACTTCAGTTTTAGTGC 57.107 40.909 0.00 0.00 0.00 4.40
3684 3940 6.616947 TGTTTGGTTGACTTCAGTTTTAGTG 58.383 36.000 0.00 0.00 0.00 2.74
3685 3941 6.827586 TGTTTGGTTGACTTCAGTTTTAGT 57.172 33.333 0.00 0.00 0.00 2.24
3686 3942 7.254084 GCAATGTTTGGTTGACTTCAGTTTTAG 60.254 37.037 0.00 0.00 0.00 1.85
3687 3943 6.533367 GCAATGTTTGGTTGACTTCAGTTTTA 59.467 34.615 0.00 0.00 0.00 1.52
3688 3944 5.351189 GCAATGTTTGGTTGACTTCAGTTTT 59.649 36.000 0.00 0.00 0.00 2.43
3689 3945 4.869861 GCAATGTTTGGTTGACTTCAGTTT 59.130 37.500 0.00 0.00 0.00 2.66
3690 3946 4.081752 TGCAATGTTTGGTTGACTTCAGTT 60.082 37.500 0.00 0.00 0.00 3.16
3691 3947 3.446873 TGCAATGTTTGGTTGACTTCAGT 59.553 39.130 0.00 0.00 0.00 3.41
3692 3948 4.044336 TGCAATGTTTGGTTGACTTCAG 57.956 40.909 0.00 0.00 0.00 3.02
3693 3949 3.446873 ACTGCAATGTTTGGTTGACTTCA 59.553 39.130 0.00 0.00 0.00 3.02
3694 3950 4.045636 ACTGCAATGTTTGGTTGACTTC 57.954 40.909 0.00 0.00 0.00 3.01
3695 3951 4.470334 AACTGCAATGTTTGGTTGACTT 57.530 36.364 0.00 0.00 0.00 3.01
3696 3952 5.590530 TTAACTGCAATGTTTGGTTGACT 57.409 34.783 0.00 0.00 0.00 3.41
3697 3953 6.654793 TTTTAACTGCAATGTTTGGTTGAC 57.345 33.333 0.00 0.00 0.00 3.18
3698 3954 7.550551 TGATTTTTAACTGCAATGTTTGGTTGA 59.449 29.630 0.00 0.00 0.00 3.18
3699 3955 7.692088 TGATTTTTAACTGCAATGTTTGGTTG 58.308 30.769 0.00 0.00 0.00 3.77
3700 3956 7.856145 TGATTTTTAACTGCAATGTTTGGTT 57.144 28.000 0.00 0.00 0.00 3.67
3701 3957 7.552330 AGTTGATTTTTAACTGCAATGTTTGGT 59.448 29.630 0.00 0.00 37.03 3.67
3702 3958 7.918643 AGTTGATTTTTAACTGCAATGTTTGG 58.081 30.769 0.00 0.00 37.03 3.28
3705 3961 9.979578 TGATAGTTGATTTTTAACTGCAATGTT 57.020 25.926 0.00 0.00 38.70 2.71
3735 3991 8.776470 CGGGACTTCTTAACACATTTTTAGTTA 58.224 33.333 0.00 0.00 0.00 2.24
3736 3992 7.499895 TCGGGACTTCTTAACACATTTTTAGTT 59.500 33.333 0.00 0.00 0.00 2.24
3737 3993 6.993902 TCGGGACTTCTTAACACATTTTTAGT 59.006 34.615 0.00 0.00 0.00 2.24
3738 3994 7.429636 TCGGGACTTCTTAACACATTTTTAG 57.570 36.000 0.00 0.00 0.00 1.85
3739 3995 7.989416 ATCGGGACTTCTTAACACATTTTTA 57.011 32.000 0.00 0.00 0.00 1.52
3740 3996 6.894339 ATCGGGACTTCTTAACACATTTTT 57.106 33.333 0.00 0.00 0.00 1.94
3741 3997 6.488683 TCAATCGGGACTTCTTAACACATTTT 59.511 34.615 0.00 0.00 0.00 1.82
3742 3998 6.001460 TCAATCGGGACTTCTTAACACATTT 58.999 36.000 0.00 0.00 0.00 2.32
3743 3999 5.556915 TCAATCGGGACTTCTTAACACATT 58.443 37.500 0.00 0.00 0.00 2.71
3744 4000 5.160607 TCAATCGGGACTTCTTAACACAT 57.839 39.130 0.00 0.00 0.00 3.21
3745 4001 4.610605 TCAATCGGGACTTCTTAACACA 57.389 40.909 0.00 0.00 0.00 3.72
3746 4002 5.063564 GTGATCAATCGGGACTTCTTAACAC 59.936 44.000 0.00 0.00 0.00 3.32
3747 4003 5.046591 AGTGATCAATCGGGACTTCTTAACA 60.047 40.000 0.00 0.00 0.00 2.41
3748 4004 5.420409 AGTGATCAATCGGGACTTCTTAAC 58.580 41.667 0.00 0.00 0.00 2.01
3749 4005 5.186992 TGAGTGATCAATCGGGACTTCTTAA 59.813 40.000 17.56 0.00 0.00 1.85
3750 4006 4.709886 TGAGTGATCAATCGGGACTTCTTA 59.290 41.667 17.56 0.00 0.00 2.10
3751 4007 3.515502 TGAGTGATCAATCGGGACTTCTT 59.484 43.478 17.56 0.00 0.00 2.52
3752 4008 3.099905 TGAGTGATCAATCGGGACTTCT 58.900 45.455 17.56 0.00 0.00 2.85
3753 4009 3.526931 TGAGTGATCAATCGGGACTTC 57.473 47.619 17.56 0.00 0.00 3.01
3754 4010 3.452264 TCATGAGTGATCAATCGGGACTT 59.548 43.478 17.56 0.00 0.00 3.01
3755 4011 3.033909 TCATGAGTGATCAATCGGGACT 58.966 45.455 17.56 0.00 0.00 3.85
3756 4012 3.126831 GTCATGAGTGATCAATCGGGAC 58.873 50.000 22.54 22.54 36.60 4.46
3757 4013 2.765699 TGTCATGAGTGATCAATCGGGA 59.234 45.455 17.56 14.10 36.60 5.14
3758 4014 3.129109 CTGTCATGAGTGATCAATCGGG 58.871 50.000 17.56 12.13 36.60 5.14
3759 4015 3.129109 CCTGTCATGAGTGATCAATCGG 58.871 50.000 17.56 12.47 36.60 4.18
3760 4016 2.543012 GCCTGTCATGAGTGATCAATCG 59.457 50.000 17.56 5.31 36.60 3.34
3761 4017 2.877168 GGCCTGTCATGAGTGATCAATC 59.123 50.000 16.08 16.08 36.60 2.67
3762 4018 2.508716 AGGCCTGTCATGAGTGATCAAT 59.491 45.455 3.11 0.00 36.60 2.57
3763 4019 1.911357 AGGCCTGTCATGAGTGATCAA 59.089 47.619 3.11 0.00 36.60 2.57
3764 4020 1.208776 CAGGCCTGTCATGAGTGATCA 59.791 52.381 25.53 0.00 36.60 2.92
3765 4021 1.950828 CAGGCCTGTCATGAGTGATC 58.049 55.000 25.53 0.00 36.60 2.92
3766 4022 0.107312 GCAGGCCTGTCATGAGTGAT 60.107 55.000 32.81 0.00 36.60 3.06
3767 4023 1.297689 GCAGGCCTGTCATGAGTGA 59.702 57.895 32.81 0.00 0.00 3.41
3768 4024 1.002990 TGCAGGCCTGTCATGAGTG 60.003 57.895 32.81 6.54 0.00 3.51
3769 4025 1.298993 CTGCAGGCCTGTCATGAGT 59.701 57.895 32.81 0.00 0.00 3.41
3770 4026 1.451567 CCTGCAGGCCTGTCATGAG 60.452 63.158 32.81 19.44 0.00 2.90
3771 4027 1.491274 TTCCTGCAGGCCTGTCATGA 61.491 55.000 32.81 26.33 34.44 3.07
3772 4028 0.609957 TTTCCTGCAGGCCTGTCATG 60.610 55.000 32.81 24.77 34.44 3.07
3773 4029 0.323178 CTTTCCTGCAGGCCTGTCAT 60.323 55.000 32.81 0.00 34.44 3.06
3774 4030 1.073722 CTTTCCTGCAGGCCTGTCA 59.926 57.895 32.81 27.22 34.44 3.58
3775 4031 0.538287 AACTTTCCTGCAGGCCTGTC 60.538 55.000 32.81 24.35 34.44 3.51
3776 4032 0.106015 AAACTTTCCTGCAGGCCTGT 60.106 50.000 32.81 20.95 34.44 4.00
3777 4033 0.316204 CAAACTTTCCTGCAGGCCTG 59.684 55.000 29.34 29.34 34.44 4.85
3778 4034 0.106015 ACAAACTTTCCTGCAGGCCT 60.106 50.000 28.91 0.00 34.44 5.19
3779 4035 0.032540 CACAAACTTTCCTGCAGGCC 59.967 55.000 28.91 0.00 34.44 5.19
3780 4036 0.598419 GCACAAACTTTCCTGCAGGC 60.598 55.000 28.91 8.23 34.44 4.85
3781 4037 0.032540 GGCACAAACTTTCCTGCAGG 59.967 55.000 27.87 27.87 0.00 4.85
3782 4038 0.746063 TGGCACAAACTTTCCTGCAG 59.254 50.000 6.78 6.78 31.92 4.41
3783 4039 2.893441 TGGCACAAACTTTCCTGCA 58.107 47.368 0.00 0.00 31.92 4.41
3796 4052 7.362056 CCAAGGTATGCTTTGTATATATGGCAC 60.362 40.741 5.01 0.00 30.74 5.01
3797 4053 6.658816 CCAAGGTATGCTTTGTATATATGGCA 59.341 38.462 5.01 0.00 30.74 4.92
3798 4054 6.659242 ACCAAGGTATGCTTTGTATATATGGC 59.341 38.462 5.01 0.00 30.74 4.40
3799 4055 9.905713 ATACCAAGGTATGCTTTGTATATATGG 57.094 33.333 10.85 0.00 39.56 2.74
3826 4082 5.416271 TTGAGTAGGACAAATGGACTACC 57.584 43.478 10.97 0.00 37.18 3.18
3827 4083 7.923414 AAATTGAGTAGGACAAATGGACTAC 57.077 36.000 8.04 8.04 36.84 2.73
3828 4084 9.667107 CTTAAATTGAGTAGGACAAATGGACTA 57.333 33.333 0.00 0.00 0.00 2.59
3829 4085 8.164070 ACTTAAATTGAGTAGGACAAATGGACT 58.836 33.333 0.00 0.00 0.00 3.85
3830 4086 8.237267 CACTTAAATTGAGTAGGACAAATGGAC 58.763 37.037 0.00 0.00 0.00 4.02
3831 4087 7.393234 CCACTTAAATTGAGTAGGACAAATGGA 59.607 37.037 0.00 0.00 0.00 3.41
3832 4088 7.176690 ACCACTTAAATTGAGTAGGACAAATGG 59.823 37.037 11.24 0.00 0.00 3.16
3833 4089 8.023128 CACCACTTAAATTGAGTAGGACAAATG 58.977 37.037 11.24 0.00 0.00 2.32
3834 4090 7.942341 TCACCACTTAAATTGAGTAGGACAAAT 59.058 33.333 11.24 0.00 0.00 2.32
3835 4091 7.284074 TCACCACTTAAATTGAGTAGGACAAA 58.716 34.615 11.24 0.00 0.00 2.83
3836 4092 6.833041 TCACCACTTAAATTGAGTAGGACAA 58.167 36.000 11.24 0.00 0.00 3.18
3837 4093 6.428083 TCACCACTTAAATTGAGTAGGACA 57.572 37.500 11.24 0.00 0.00 4.02
3838 4094 6.255887 CGATCACCACTTAAATTGAGTAGGAC 59.744 42.308 11.24 2.97 0.00 3.85
3839 4095 6.153851 TCGATCACCACTTAAATTGAGTAGGA 59.846 38.462 11.24 2.19 0.00 2.94
3840 4096 6.338146 TCGATCACCACTTAAATTGAGTAGG 58.662 40.000 0.00 0.00 0.00 3.18
3841 4097 7.827819 TTCGATCACCACTTAAATTGAGTAG 57.172 36.000 0.00 0.00 0.00 2.57
3842 4098 7.201609 GCATTCGATCACCACTTAAATTGAGTA 60.202 37.037 0.00 0.00 0.00 2.59
3843 4099 6.403636 GCATTCGATCACCACTTAAATTGAGT 60.404 38.462 0.00 0.00 0.00 3.41
3844 4100 5.967674 GCATTCGATCACCACTTAAATTGAG 59.032 40.000 0.00 0.00 0.00 3.02
3845 4101 5.447144 CGCATTCGATCACCACTTAAATTGA 60.447 40.000 0.00 0.00 38.10 2.57
3846 4102 4.730042 CGCATTCGATCACCACTTAAATTG 59.270 41.667 0.00 0.00 38.10 2.32
3847 4103 4.394920 ACGCATTCGATCACCACTTAAATT 59.605 37.500 0.00 0.00 39.41 1.82
3848 4104 3.938963 ACGCATTCGATCACCACTTAAAT 59.061 39.130 0.00 0.00 39.41 1.40
3849 4105 3.331150 ACGCATTCGATCACCACTTAAA 58.669 40.909 0.00 0.00 39.41 1.52
3850 4106 2.927477 GACGCATTCGATCACCACTTAA 59.073 45.455 0.00 0.00 39.41 1.85
3851 4107 2.094442 TGACGCATTCGATCACCACTTA 60.094 45.455 0.00 0.00 39.41 2.24
3852 4108 1.337728 TGACGCATTCGATCACCACTT 60.338 47.619 0.00 0.00 39.41 3.16
3853 4109 0.246360 TGACGCATTCGATCACCACT 59.754 50.000 0.00 0.00 39.41 4.00
3854 4110 0.647410 CTGACGCATTCGATCACCAC 59.353 55.000 0.00 0.00 39.41 4.16
3855 4111 0.246360 ACTGACGCATTCGATCACCA 59.754 50.000 0.00 0.00 39.41 4.17
3856 4112 2.203800 TACTGACGCATTCGATCACC 57.796 50.000 0.00 0.00 39.41 4.02
3857 4113 2.726760 GGATACTGACGCATTCGATCAC 59.273 50.000 0.00 0.00 39.41 3.06
3858 4114 3.013276 GGATACTGACGCATTCGATCA 57.987 47.619 0.00 0.00 39.41 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.