Multiple sequence alignment - TraesCS7D01G386000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G386000 chr7D 100.000 6500 0 0 1 6500 500625553 500632052 0.000000e+00 12004.0
1 TraesCS7D01G386000 chr7D 96.774 279 8 1 289 566 353940328 353940606 1.280000e-126 464.0
2 TraesCS7D01G386000 chr7D 95.070 284 14 0 283 566 505594813 505595096 1.290000e-121 448.0
3 TraesCS7D01G386000 chr7B 91.578 3562 188 58 560 4059 528762788 528766299 0.000000e+00 4813.0
4 TraesCS7D01G386000 chr7B 90.839 2478 152 28 4059 6500 528766332 528768770 0.000000e+00 3249.0
5 TraesCS7D01G386000 chr7B 97.849 279 6 0 290 568 463843630 463843352 3.520000e-132 483.0
6 TraesCS7D01G386000 chr7B 89.262 298 28 3 1 295 528762504 528762800 2.860000e-98 370.0
7 TraesCS7D01G386000 chr7B 79.070 172 31 4 2 172 605978870 605978703 5.330000e-21 113.0
8 TraesCS7D01G386000 chr7A 93.654 3057 133 25 597 3626 566537401 566540423 0.000000e+00 4514.0
9 TraesCS7D01G386000 chr7A 93.813 2392 96 13 3673 6042 566540433 566542794 0.000000e+00 3550.0
10 TraesCS7D01G386000 chr6D 97.518 282 7 0 287 568 407825820 407826101 3.520000e-132 483.0
11 TraesCS7D01G386000 chr6D 97.818 275 6 0 292 566 9452651 9452377 5.900000e-130 475.0
12 TraesCS7D01G386000 chr6D 75.049 509 101 16 4111 4612 139311702 139311213 5.110000e-51 213.0
13 TraesCS7D01G386000 chr6D 88.435 147 17 0 4711 4857 139311134 139310988 1.860000e-40 178.0
14 TraesCS7D01G386000 chr6D 81.818 187 31 2 3810 3996 139312263 139312080 3.140000e-33 154.0
15 TraesCS7D01G386000 chr5D 98.182 275 5 0 292 566 518286735 518287009 1.270000e-131 481.0
16 TraesCS7D01G386000 chr5D 87.500 56 5 2 119 173 51245784 51245730 5.440000e-06 63.9
17 TraesCS7D01G386000 chr5D 87.500 56 5 2 119 173 51322394 51322340 5.440000e-06 63.9
18 TraesCS7D01G386000 chr5D 87.273 55 5 2 119 172 51105902 51105849 1.960000e-05 62.1
19 TraesCS7D01G386000 chr5D 87.273 55 5 2 119 172 51122773 51122720 1.960000e-05 62.1
20 TraesCS7D01G386000 chr5D 87.273 55 5 2 119 172 51180702 51180649 1.960000e-05 62.1
21 TraesCS7D01G386000 chr5D 87.273 55 5 2 119 172 51199592 51199539 1.960000e-05 62.1
22 TraesCS7D01G386000 chr5B 97.133 279 8 0 290 568 544337024 544337302 7.630000e-129 472.0
23 TraesCS7D01G386000 chr5B 87.500 56 5 2 119 173 54392608 54392554 5.440000e-06 63.9
24 TraesCS7D01G386000 chr2B 97.455 275 7 0 292 566 219625624 219625898 2.740000e-128 470.0
25 TraesCS7D01G386000 chr3B 95.745 282 12 0 292 573 99093884 99093603 7.680000e-124 455.0
26 TraesCS7D01G386000 chr6B 88.608 158 17 1 4700 4857 239286225 239286069 2.390000e-44 191.0
27 TraesCS7D01G386000 chr6B 83.436 163 21 4 1154 1314 239290315 239290157 5.250000e-31 147.0
28 TraesCS7D01G386000 chr6A 89.116 147 16 0 4711 4857 181897430 181897284 4.000000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G386000 chr7D 500625553 500632052 6499 False 12004.000000 12004 100.000000 1 6500 1 chr7D.!!$F2 6499
1 TraesCS7D01G386000 chr7B 528762504 528768770 6266 False 2810.666667 4813 90.559667 1 6500 3 chr7B.!!$F1 6499
2 TraesCS7D01G386000 chr7A 566537401 566542794 5393 False 4032.000000 4514 93.733500 597 6042 2 chr7A.!!$F1 5445

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
565 569 0.115349 ACTCCCACTGTGGCTAGTCT 59.885 55.0 21.47 3.44 35.79 3.24 F
1123 1147 0.667993 CTCTTGGTTTCTTGGCGCAA 59.332 50.0 10.83 0.00 0.00 4.85 F
1128 1152 0.668535 GGTTTCTTGGCGCAAACTCT 59.331 50.0 10.83 0.00 33.70 3.24 F
1173 1198 1.168407 TGTGCTCTGGTTCTTGCAGC 61.168 55.0 0.00 0.00 36.03 5.25 F
2472 2542 1.583495 GGTGCCCAAACCGAAGCTAC 61.583 60.0 0.00 0.00 0.00 3.58 F
3275 3357 1.065647 ATGGCCCTGAGGATGAGATG 58.934 55.0 0.00 0.00 33.47 2.90 F
4315 4438 0.246360 TCCGATGAAGCGAGCAAGAA 59.754 50.0 0.00 0.00 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1392 1446 0.324943 AGACGCTACCATGCCAAACT 59.675 50.000 0.00 0.0 0.00 2.66 R
2579 2650 0.391661 CAGTTATGCAGTGACCCGCT 60.392 55.000 0.00 0.0 0.00 5.52 R
2856 2927 1.002888 CTGAGGACATTGACTGTGCCT 59.997 52.381 0.00 0.0 46.66 4.75 R
3025 3096 1.480137 CTGGAATCGAGCTGAGTTCCT 59.520 52.381 16.96 0.0 40.55 3.36 R
3341 3423 0.034380 ATGAAGCAGCAGCCACTGAT 60.034 50.000 7.73 0.0 43.56 2.90 R
5134 5260 0.039798 GTTGATGGCCATATGCAGCG 60.040 55.000 20.84 0.0 43.89 5.18 R
6290 6447 0.105593 CGGCTGGTCTCATGCATAGT 59.894 55.000 0.00 0.0 0.00 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.246203 TGACTTCTTGACTGGCTACTACAAT 59.754 40.000 0.00 0.00 0.00 2.71
43 44 7.900782 TGACTGGCTACTACAATAAGTTTTC 57.099 36.000 0.00 0.00 0.00 2.29
66 68 4.753662 TCCGGTGAGGGAGGGTCG 62.754 72.222 0.00 0.00 41.52 4.79
75 77 4.222847 GGAGGGTCGGGCGATGAC 62.223 72.222 0.00 0.00 35.60 3.06
130 134 8.533569 TTGTAATCATCACTAGATGGTCTACA 57.466 34.615 0.00 7.35 44.74 2.74
131 135 8.712228 TGTAATCATCACTAGATGGTCTACAT 57.288 34.615 0.00 0.00 44.74 2.29
132 136 9.807921 TGTAATCATCACTAGATGGTCTACATA 57.192 33.333 0.00 0.00 44.74 2.29
135 139 9.766754 AATCATCACTAGATGGTCTACATATCT 57.233 33.333 0.00 0.00 44.74 1.98
176 180 2.901839 TCTAGTGTTCCTTGTACCACCC 59.098 50.000 0.00 0.00 0.00 4.61
178 182 2.980548 AGTGTTCCTTGTACCACCCTA 58.019 47.619 0.00 0.00 0.00 3.53
269 273 1.913419 ACCCTGAAATATGTCACCCGT 59.087 47.619 0.00 0.00 0.00 5.28
295 299 2.421811 GGTCCTCTCTAGCCGTTAGACT 60.422 54.545 0.00 0.00 34.67 3.24
296 300 3.181456 GGTCCTCTCTAGCCGTTAGACTA 60.181 52.174 0.00 0.00 34.67 2.59
297 301 4.060205 GTCCTCTCTAGCCGTTAGACTAG 58.940 52.174 0.00 0.00 37.76 2.57
298 302 2.809696 CCTCTCTAGCCGTTAGACTAGC 59.190 54.545 0.00 0.00 36.60 3.42
299 303 2.809696 CTCTCTAGCCGTTAGACTAGCC 59.190 54.545 0.00 0.00 36.60 3.93
300 304 2.172082 TCTCTAGCCGTTAGACTAGCCA 59.828 50.000 0.00 0.00 36.60 4.75
301 305 2.291190 CTCTAGCCGTTAGACTAGCCAC 59.709 54.545 0.00 0.00 36.60 5.01
302 306 2.022195 CTAGCCGTTAGACTAGCCACA 58.978 52.381 0.00 0.00 30.24 4.17
303 307 1.263356 AGCCGTTAGACTAGCCACAA 58.737 50.000 0.00 0.00 0.00 3.33
304 308 1.831736 AGCCGTTAGACTAGCCACAAT 59.168 47.619 0.00 0.00 0.00 2.71
305 309 1.933853 GCCGTTAGACTAGCCACAATG 59.066 52.381 0.00 0.00 0.00 2.82
306 310 2.550978 CCGTTAGACTAGCCACAATGG 58.449 52.381 0.00 0.00 41.55 3.16
307 311 2.550978 CGTTAGACTAGCCACAATGGG 58.449 52.381 0.00 0.00 38.19 4.00
319 323 5.031066 GCCACAATGGGTAGTAACATAGA 57.969 43.478 0.00 0.00 38.19 1.98
320 324 5.057149 GCCACAATGGGTAGTAACATAGAG 58.943 45.833 0.00 0.00 38.19 2.43
321 325 5.396436 GCCACAATGGGTAGTAACATAGAGT 60.396 44.000 0.00 0.00 38.19 3.24
322 326 6.049149 CCACAATGGGTAGTAACATAGAGTG 58.951 44.000 0.00 0.00 32.67 3.51
323 327 6.049149 CACAATGGGTAGTAACATAGAGTGG 58.951 44.000 0.00 0.00 0.00 4.00
324 328 5.724854 ACAATGGGTAGTAACATAGAGTGGT 59.275 40.000 0.00 0.00 0.00 4.16
325 329 6.899075 ACAATGGGTAGTAACATAGAGTGGTA 59.101 38.462 0.00 0.00 0.00 3.25
326 330 7.400915 ACAATGGGTAGTAACATAGAGTGGTAA 59.599 37.037 0.00 0.00 30.19 2.85
327 331 6.780457 TGGGTAGTAACATAGAGTGGTAAC 57.220 41.667 0.00 0.00 30.19 2.50
350 354 5.858381 CATGGGCATGTTACTACTCTATGT 58.142 41.667 0.00 0.00 34.23 2.29
351 355 5.950544 TGGGCATGTTACTACTCTATGTT 57.049 39.130 0.00 0.00 0.00 2.71
352 356 7.441836 CATGGGCATGTTACTACTCTATGTTA 58.558 38.462 0.00 0.00 34.23 2.41
353 357 6.812998 TGGGCATGTTACTACTCTATGTTAC 58.187 40.000 0.00 0.00 0.00 2.50
354 358 6.610020 TGGGCATGTTACTACTCTATGTTACT 59.390 38.462 0.00 0.00 0.00 2.24
355 359 7.781219 TGGGCATGTTACTACTCTATGTTACTA 59.219 37.037 0.00 0.00 0.00 1.82
356 360 8.081025 GGGCATGTTACTACTCTATGTTACTAC 58.919 40.741 0.00 0.00 0.00 2.73
357 361 8.081025 GGCATGTTACTACTCTATGTTACTACC 58.919 40.741 0.00 0.00 0.00 3.18
358 362 8.848182 GCATGTTACTACTCTATGTTACTACCT 58.152 37.037 0.00 0.00 0.00 3.08
368 372 8.384718 ACTCTATGTTACTACCTCTATAGTGGG 58.615 40.741 21.82 16.23 36.09 4.61
369 373 8.515927 TCTATGTTACTACCTCTATAGTGGGA 57.484 38.462 21.82 14.49 36.09 4.37
370 374 8.952602 TCTATGTTACTACCTCTATAGTGGGAA 58.047 37.037 21.82 10.70 36.09 3.97
371 375 9.233649 CTATGTTACTACCTCTATAGTGGGAAG 57.766 40.741 21.82 19.36 36.09 3.46
372 376 6.978261 TGTTACTACCTCTATAGTGGGAAGT 58.022 40.000 23.48 23.48 36.09 3.01
373 377 8.106017 TGTTACTACCTCTATAGTGGGAAGTA 57.894 38.462 21.82 22.01 36.09 2.24
374 378 8.560039 TGTTACTACCTCTATAGTGGGAAGTAA 58.440 37.037 27.07 27.07 38.04 2.24
375 379 8.845227 GTTACTACCTCTATAGTGGGAAGTAAC 58.155 40.741 33.17 33.17 43.99 2.50
376 380 6.978261 ACTACCTCTATAGTGGGAAGTAACA 58.022 40.000 21.82 0.29 34.02 2.41
377 381 7.593653 ACTACCTCTATAGTGGGAAGTAACAT 58.406 38.462 21.82 3.60 34.02 2.71
378 382 8.730948 ACTACCTCTATAGTGGGAAGTAACATA 58.269 37.037 21.82 4.45 34.02 2.29
379 383 9.756571 CTACCTCTATAGTGGGAAGTAACATAT 57.243 37.037 21.82 2.54 33.22 1.78
380 384 8.423906 ACCTCTATAGTGGGAAGTAACATATG 57.576 38.462 21.82 0.00 33.22 1.78
381 385 8.011290 ACCTCTATAGTGGGAAGTAACATATGT 58.989 37.037 21.82 1.41 33.22 2.29
382 386 8.307483 CCTCTATAGTGGGAAGTAACATATGTG 58.693 40.741 9.63 0.00 0.00 3.21
383 387 8.777578 TCTATAGTGGGAAGTAACATATGTGT 57.222 34.615 9.63 2.63 41.28 3.72
384 388 8.638873 TCTATAGTGGGAAGTAACATATGTGTG 58.361 37.037 9.63 0.00 38.92 3.82
385 389 4.843728 AGTGGGAAGTAACATATGTGTGG 58.156 43.478 9.63 0.00 38.92 4.17
386 390 4.288626 AGTGGGAAGTAACATATGTGTGGT 59.711 41.667 9.63 0.00 38.92 4.16
387 391 5.486063 AGTGGGAAGTAACATATGTGTGGTA 59.514 40.000 9.63 0.00 38.92 3.25
388 392 6.013206 AGTGGGAAGTAACATATGTGTGGTAA 60.013 38.462 9.63 0.00 38.92 2.85
389 393 6.093082 GTGGGAAGTAACATATGTGTGGTAAC 59.907 42.308 9.63 1.91 38.92 2.50
432 436 8.599055 TTATGCTATAGACTCATCTTGCTTTG 57.401 34.615 3.21 0.00 36.29 2.77
433 437 5.363101 TGCTATAGACTCATCTTGCTTTGG 58.637 41.667 3.21 0.00 36.29 3.28
434 438 5.104776 TGCTATAGACTCATCTTGCTTTGGT 60.105 40.000 3.21 0.00 36.29 3.67
435 439 6.098266 TGCTATAGACTCATCTTGCTTTGGTA 59.902 38.462 3.21 0.00 36.29 3.25
436 440 7.158021 GCTATAGACTCATCTTGCTTTGGTAT 58.842 38.462 3.21 0.00 36.29 2.73
437 441 7.117523 GCTATAGACTCATCTTGCTTTGGTATG 59.882 40.741 3.21 0.00 36.29 2.39
438 442 5.171339 AGACTCATCTTGCTTTGGTATGT 57.829 39.130 0.00 0.00 0.00 2.29
439 443 4.940046 AGACTCATCTTGCTTTGGTATGTG 59.060 41.667 0.00 0.00 0.00 3.21
440 444 4.655963 ACTCATCTTGCTTTGGTATGTGT 58.344 39.130 0.00 0.00 0.00 3.72
441 445 4.456911 ACTCATCTTGCTTTGGTATGTGTG 59.543 41.667 0.00 0.00 0.00 3.82
442 446 4.650734 TCATCTTGCTTTGGTATGTGTGA 58.349 39.130 0.00 0.00 0.00 3.58
443 447 5.255687 TCATCTTGCTTTGGTATGTGTGAT 58.744 37.500 0.00 0.00 0.00 3.06
444 448 5.124297 TCATCTTGCTTTGGTATGTGTGATG 59.876 40.000 0.00 0.00 0.00 3.07
445 449 4.397420 TCTTGCTTTGGTATGTGTGATGT 58.603 39.130 0.00 0.00 0.00 3.06
446 450 4.826733 TCTTGCTTTGGTATGTGTGATGTT 59.173 37.500 0.00 0.00 0.00 2.71
447 451 6.000840 TCTTGCTTTGGTATGTGTGATGTTA 58.999 36.000 0.00 0.00 0.00 2.41
448 452 5.621197 TGCTTTGGTATGTGTGATGTTAC 57.379 39.130 0.00 0.00 0.00 2.50
449 453 5.066593 TGCTTTGGTATGTGTGATGTTACA 58.933 37.500 0.00 0.00 0.00 2.41
450 454 5.181056 TGCTTTGGTATGTGTGATGTTACAG 59.819 40.000 0.00 0.00 0.00 2.74
451 455 5.181245 GCTTTGGTATGTGTGATGTTACAGT 59.819 40.000 0.00 0.00 0.00 3.55
452 456 6.370442 GCTTTGGTATGTGTGATGTTACAGTA 59.630 38.462 0.00 0.00 0.00 2.74
453 457 7.094975 GCTTTGGTATGTGTGATGTTACAGTAA 60.095 37.037 0.00 0.00 0.00 2.24
454 458 7.661127 TTGGTATGTGTGATGTTACAGTAAC 57.339 36.000 15.58 15.58 39.11 2.50
455 459 6.999950 TGGTATGTGTGATGTTACAGTAACT 58.000 36.000 21.56 9.41 39.38 2.24
456 460 8.124808 TGGTATGTGTGATGTTACAGTAACTA 57.875 34.615 21.56 10.50 39.38 2.24
457 461 8.248253 TGGTATGTGTGATGTTACAGTAACTAG 58.752 37.037 21.56 0.00 39.38 2.57
458 462 7.222224 GGTATGTGTGATGTTACAGTAACTAGC 59.778 40.741 21.56 12.59 39.38 3.42
459 463 6.340962 TGTGTGATGTTACAGTAACTAGCT 57.659 37.500 21.56 6.57 39.38 3.32
460 464 7.457024 TGTGTGATGTTACAGTAACTAGCTA 57.543 36.000 21.56 4.25 39.38 3.32
461 465 7.888424 TGTGTGATGTTACAGTAACTAGCTAA 58.112 34.615 21.56 3.59 39.38 3.09
462 466 8.027189 TGTGTGATGTTACAGTAACTAGCTAAG 58.973 37.037 21.56 0.00 39.38 2.18
463 467 8.027771 GTGTGATGTTACAGTAACTAGCTAAGT 58.972 37.037 21.56 0.00 41.49 2.24
478 482 8.962884 ACTAGCTAAGTTACTAGAACTACCTC 57.037 38.462 18.49 0.00 38.53 3.85
479 483 8.771286 ACTAGCTAAGTTACTAGAACTACCTCT 58.229 37.037 18.49 1.85 38.53 3.69
480 484 9.264719 CTAGCTAAGTTACTAGAACTACCTCTC 57.735 40.741 0.00 0.00 38.53 3.20
481 485 7.864770 AGCTAAGTTACTAGAACTACCTCTCT 58.135 38.462 0.00 0.00 0.00 3.10
482 486 8.330993 AGCTAAGTTACTAGAACTACCTCTCTT 58.669 37.037 0.00 0.00 0.00 2.85
483 487 8.959548 GCTAAGTTACTAGAACTACCTCTCTTT 58.040 37.037 0.00 0.00 0.00 2.52
486 490 8.937207 AGTTACTAGAACTACCTCTCTTTTCA 57.063 34.615 0.00 0.00 0.00 2.69
487 491 9.536510 AGTTACTAGAACTACCTCTCTTTTCAT 57.463 33.333 0.00 0.00 0.00 2.57
494 498 8.871125 AGAACTACCTCTCTTTTCATTAACTCA 58.129 33.333 0.00 0.00 0.00 3.41
495 499 9.660180 GAACTACCTCTCTTTTCATTAACTCAT 57.340 33.333 0.00 0.00 0.00 2.90
497 501 9.442047 ACTACCTCTCTTTTCATTAACTCATTG 57.558 33.333 0.00 0.00 0.00 2.82
498 502 7.150783 ACCTCTCTTTTCATTAACTCATTGC 57.849 36.000 0.00 0.00 0.00 3.56
499 503 6.151817 ACCTCTCTTTTCATTAACTCATTGCC 59.848 38.462 0.00 0.00 0.00 4.52
500 504 6.151648 CCTCTCTTTTCATTAACTCATTGCCA 59.848 38.462 0.00 0.00 0.00 4.92
501 505 6.913170 TCTCTTTTCATTAACTCATTGCCAC 58.087 36.000 0.00 0.00 0.00 5.01
502 506 6.489700 TCTCTTTTCATTAACTCATTGCCACA 59.510 34.615 0.00 0.00 0.00 4.17
503 507 7.177216 TCTCTTTTCATTAACTCATTGCCACAT 59.823 33.333 0.00 0.00 0.00 3.21
504 508 8.347004 TCTTTTCATTAACTCATTGCCACATA 57.653 30.769 0.00 0.00 0.00 2.29
505 509 8.461222 TCTTTTCATTAACTCATTGCCACATAG 58.539 33.333 0.00 0.00 0.00 2.23
506 510 7.936496 TTTCATTAACTCATTGCCACATAGA 57.064 32.000 0.00 0.00 0.00 1.98
507 511 6.925610 TCATTAACTCATTGCCACATAGAC 57.074 37.500 0.00 0.00 0.00 2.59
508 512 6.413892 TCATTAACTCATTGCCACATAGACA 58.586 36.000 0.00 0.00 0.00 3.41
509 513 6.883756 TCATTAACTCATTGCCACATAGACAA 59.116 34.615 0.00 0.00 0.00 3.18
510 514 7.392953 TCATTAACTCATTGCCACATAGACAAA 59.607 33.333 0.00 0.00 0.00 2.83
511 515 7.701539 TTAACTCATTGCCACATAGACAAAT 57.298 32.000 0.00 0.00 0.00 2.32
512 516 6.594788 AACTCATTGCCACATAGACAAATT 57.405 33.333 0.00 0.00 0.00 1.82
513 517 6.594788 ACTCATTGCCACATAGACAAATTT 57.405 33.333 0.00 0.00 0.00 1.82
514 518 6.392354 ACTCATTGCCACATAGACAAATTTG 58.608 36.000 16.67 16.67 0.00 2.32
515 519 5.170021 TCATTGCCACATAGACAAATTTGC 58.830 37.500 18.12 10.76 0.00 3.68
516 520 4.870123 TTGCCACATAGACAAATTTGCT 57.130 36.364 18.12 16.84 0.00 3.91
517 521 4.177165 TGCCACATAGACAAATTTGCTG 57.823 40.909 18.12 12.32 0.00 4.41
518 522 3.825585 TGCCACATAGACAAATTTGCTGA 59.174 39.130 18.12 3.65 0.00 4.26
519 523 4.082625 TGCCACATAGACAAATTTGCTGAG 60.083 41.667 18.12 13.60 0.00 3.35
520 524 4.082571 GCCACATAGACAAATTTGCTGAGT 60.083 41.667 18.12 14.11 0.00 3.41
521 525 5.565439 GCCACATAGACAAATTTGCTGAGTT 60.565 40.000 18.12 0.00 0.00 3.01
522 526 5.860182 CCACATAGACAAATTTGCTGAGTTG 59.140 40.000 18.12 10.57 0.00 3.16
523 527 5.860182 CACATAGACAAATTTGCTGAGTTGG 59.140 40.000 18.12 3.57 0.00 3.77
524 528 5.769662 ACATAGACAAATTTGCTGAGTTGGA 59.230 36.000 18.12 0.79 0.00 3.53
525 529 4.574599 AGACAAATTTGCTGAGTTGGAC 57.425 40.909 18.12 0.00 0.00 4.02
526 530 4.210331 AGACAAATTTGCTGAGTTGGACT 58.790 39.130 18.12 0.00 0.00 3.85
527 531 4.646492 AGACAAATTTGCTGAGTTGGACTT 59.354 37.500 18.12 0.00 0.00 3.01
528 532 4.685924 ACAAATTTGCTGAGTTGGACTTG 58.314 39.130 18.12 0.00 0.00 3.16
529 533 4.402155 ACAAATTTGCTGAGTTGGACTTGA 59.598 37.500 18.12 0.00 0.00 3.02
530 534 5.105392 ACAAATTTGCTGAGTTGGACTTGAA 60.105 36.000 18.12 0.00 0.00 2.69
531 535 4.843220 ATTTGCTGAGTTGGACTTGAAG 57.157 40.909 0.00 0.00 0.00 3.02
532 536 3.281727 TTGCTGAGTTGGACTTGAAGT 57.718 42.857 0.00 0.00 0.00 3.01
533 537 3.281727 TGCTGAGTTGGACTTGAAGTT 57.718 42.857 0.00 0.00 0.00 2.66
534 538 4.415881 TGCTGAGTTGGACTTGAAGTTA 57.584 40.909 0.00 0.00 0.00 2.24
535 539 4.127171 TGCTGAGTTGGACTTGAAGTTAC 58.873 43.478 0.00 0.00 0.00 2.50
536 540 4.141711 TGCTGAGTTGGACTTGAAGTTACT 60.142 41.667 0.00 3.96 0.00 2.24
537 541 4.212214 GCTGAGTTGGACTTGAAGTTACTG 59.788 45.833 11.60 2.93 0.00 2.74
538 542 4.127171 TGAGTTGGACTTGAAGTTACTGC 58.873 43.478 11.60 0.00 0.00 4.40
539 543 4.141711 TGAGTTGGACTTGAAGTTACTGCT 60.142 41.667 11.60 5.84 0.00 4.24
540 544 4.130118 AGTTGGACTTGAAGTTACTGCTG 58.870 43.478 0.00 0.00 0.00 4.41
541 545 4.127171 GTTGGACTTGAAGTTACTGCTGA 58.873 43.478 0.00 0.00 0.00 4.26
542 546 4.415881 TGGACTTGAAGTTACTGCTGAA 57.584 40.909 0.00 0.00 0.00 3.02
543 547 4.776349 TGGACTTGAAGTTACTGCTGAAA 58.224 39.130 0.00 0.00 0.00 2.69
544 548 5.376625 TGGACTTGAAGTTACTGCTGAAAT 58.623 37.500 0.00 0.00 0.00 2.17
545 549 5.827797 TGGACTTGAAGTTACTGCTGAAATT 59.172 36.000 0.00 0.00 0.00 1.82
546 550 6.995686 TGGACTTGAAGTTACTGCTGAAATTA 59.004 34.615 0.00 0.00 0.00 1.40
547 551 7.041372 TGGACTTGAAGTTACTGCTGAAATTAC 60.041 37.037 0.00 0.00 0.00 1.89
548 552 7.173390 GGACTTGAAGTTACTGCTGAAATTACT 59.827 37.037 0.00 0.00 0.00 2.24
549 553 8.089115 ACTTGAAGTTACTGCTGAAATTACTC 57.911 34.615 0.00 0.00 0.00 2.59
550 554 7.173390 ACTTGAAGTTACTGCTGAAATTACTCC 59.827 37.037 0.00 0.00 0.00 3.85
551 555 5.938125 TGAAGTTACTGCTGAAATTACTCCC 59.062 40.000 0.00 0.00 0.00 4.30
552 556 5.499004 AGTTACTGCTGAAATTACTCCCA 57.501 39.130 0.00 0.00 0.00 4.37
553 557 5.246307 AGTTACTGCTGAAATTACTCCCAC 58.754 41.667 0.00 0.00 0.00 4.61
554 558 5.013183 AGTTACTGCTGAAATTACTCCCACT 59.987 40.000 0.00 0.00 0.00 4.00
555 559 3.679389 ACTGCTGAAATTACTCCCACTG 58.321 45.455 0.00 0.00 0.00 3.66
556 560 3.073062 ACTGCTGAAATTACTCCCACTGT 59.927 43.478 0.00 0.00 0.00 3.55
557 561 3.411446 TGCTGAAATTACTCCCACTGTG 58.589 45.455 0.00 0.00 0.00 3.66
558 562 2.749621 GCTGAAATTACTCCCACTGTGG 59.250 50.000 20.01 20.01 37.25 4.17
559 563 2.749621 CTGAAATTACTCCCACTGTGGC 59.250 50.000 21.47 4.92 35.79 5.01
560 564 2.375174 TGAAATTACTCCCACTGTGGCT 59.625 45.455 21.47 8.08 35.79 4.75
561 565 3.585289 TGAAATTACTCCCACTGTGGCTA 59.415 43.478 21.47 10.31 35.79 3.93
562 566 3.914426 AATTACTCCCACTGTGGCTAG 57.086 47.619 21.47 20.51 35.79 3.42
563 567 2.320681 TTACTCCCACTGTGGCTAGT 57.679 50.000 26.22 26.22 35.79 2.57
564 568 1.848652 TACTCCCACTGTGGCTAGTC 58.151 55.000 26.56 0.00 35.79 2.59
565 569 0.115349 ACTCCCACTGTGGCTAGTCT 59.885 55.000 21.47 3.44 35.79 3.24
566 570 1.270907 CTCCCACTGTGGCTAGTCTT 58.729 55.000 21.47 0.00 35.79 3.01
567 571 2.225293 ACTCCCACTGTGGCTAGTCTTA 60.225 50.000 21.47 0.00 35.79 2.10
568 572 2.166664 CTCCCACTGTGGCTAGTCTTAC 59.833 54.545 21.47 0.00 35.79 2.34
569 573 1.899814 CCCACTGTGGCTAGTCTTACA 59.100 52.381 21.47 0.00 35.79 2.41
570 574 2.501723 CCCACTGTGGCTAGTCTTACAT 59.498 50.000 21.47 0.00 35.79 2.29
574 578 3.195825 ACTGTGGCTAGTCTTACATGGAC 59.804 47.826 0.00 0.00 0.00 4.02
592 596 7.666623 ACATGGACCGAATTTTGATTTAAAGT 58.333 30.769 0.00 0.00 0.00 2.66
617 635 2.092646 TGTGCCTTGTGTGTCTAAACCT 60.093 45.455 0.00 0.00 0.00 3.50
887 911 6.407074 CCTTCTATATTAACTAGCCCCGGATG 60.407 46.154 0.73 0.00 0.00 3.51
976 1000 3.135056 ATAGCCGCGACGAGGGTTC 62.135 63.158 26.79 6.63 40.37 3.62
997 1021 2.123683 TAGCGGAGAGAGGGCCAG 60.124 66.667 6.18 0.00 0.00 4.85
1119 1143 0.900182 CCCCCTCTTGGTTTCTTGGC 60.900 60.000 0.00 0.00 0.00 4.52
1120 1144 1.244019 CCCCTCTTGGTTTCTTGGCG 61.244 60.000 0.00 0.00 0.00 5.69
1121 1145 1.581447 CCTCTTGGTTTCTTGGCGC 59.419 57.895 0.00 0.00 0.00 6.53
1122 1146 1.172180 CCTCTTGGTTTCTTGGCGCA 61.172 55.000 10.83 0.00 0.00 6.09
1123 1147 0.667993 CTCTTGGTTTCTTGGCGCAA 59.332 50.000 10.83 0.00 0.00 4.85
1125 1149 1.202359 TCTTGGTTTCTTGGCGCAAAC 60.202 47.619 10.83 11.23 0.00 2.93
1128 1152 0.668535 GGTTTCTTGGCGCAAACTCT 59.331 50.000 10.83 0.00 33.70 3.24
1129 1153 1.600413 GGTTTCTTGGCGCAAACTCTG 60.600 52.381 10.83 0.00 33.70 3.35
1142 1166 3.786818 GCAAACTCTGCGATTATCACTGC 60.787 47.826 0.00 0.00 42.37 4.40
1143 1167 2.967599 ACTCTGCGATTATCACTGCA 57.032 45.000 0.00 0.00 35.75 4.41
1173 1198 1.168407 TGTGCTCTGGTTCTTGCAGC 61.168 55.000 0.00 0.00 36.03 5.25
1288 1313 2.364842 ATGGGCGTCTCCTGCTCT 60.365 61.111 0.00 0.00 32.72 4.09
1369 1423 4.657814 AGAATTGAAGAGGGCAAAGGTA 57.342 40.909 0.00 0.00 0.00 3.08
1392 1446 3.747854 TGCATTCTGGTTGCATGAAAA 57.252 38.095 0.00 0.00 44.73 2.29
1404 1458 2.104451 TGCATGAAAAGTTTGGCATGGT 59.896 40.909 22.81 0.00 38.75 3.55
1517 1572 3.569701 TGGCCAGAAAAATCTCTGTTGAC 59.430 43.478 0.00 0.00 41.15 3.18
1632 1691 4.846779 TGTTTGGCTAAGCTTTTGGTAG 57.153 40.909 3.20 0.00 0.00 3.18
1642 1701 3.369546 GCTTTTGGTAGCAAGCTTTGA 57.630 42.857 10.63 0.00 41.93 2.69
1655 1714 6.476378 AGCAAGCTTTGAAGAAACCTCTATA 58.524 36.000 0.00 0.00 0.00 1.31
1791 1860 7.225734 TGTTGTCATACGAATTTCTCTGAAACA 59.774 33.333 0.00 5.95 0.00 2.83
1808 1877 6.318648 TCTGAAACAAAGTTAATCAGCACTGT 59.681 34.615 6.68 0.00 37.89 3.55
1825 1894 2.910319 ACTGTTATACCCTGCTTCCACA 59.090 45.455 0.00 0.00 0.00 4.17
2255 2324 7.118724 GCAAATATGTGATTAAATTTGTGGCG 58.881 34.615 0.00 0.00 40.05 5.69
2427 2497 4.884164 GTCTTATTTGGGTGCTATGAGCTT 59.116 41.667 0.00 0.00 42.97 3.74
2428 2498 4.883585 TCTTATTTGGGTGCTATGAGCTTG 59.116 41.667 0.00 0.00 42.97 4.01
2447 2517 6.501781 AGCTTGCATCATTCACTAAATAAGC 58.498 36.000 0.00 0.00 35.53 3.09
2472 2542 1.583495 GGTGCCCAAACCGAAGCTAC 61.583 60.000 0.00 0.00 0.00 3.58
2499 2569 7.946207 AGCTATATCATTCTCTTTCTTCGTCA 58.054 34.615 0.00 0.00 0.00 4.35
2533 2604 8.408043 TGCCGAAGATGAATTTAATTATCCAT 57.592 30.769 0.00 0.00 0.00 3.41
2579 2650 5.821995 TGAAATGATGATCATCGGCACTAAA 59.178 36.000 26.52 10.29 35.76 1.85
2693 2764 7.873719 TTTATCTTTCAACAACTTGTCAGGA 57.126 32.000 0.00 0.00 0.00 3.86
2735 2806 9.613428 TTTGTCTCTTTGTCAAATCTTTCTAGA 57.387 29.630 0.00 0.00 30.95 2.43
2935 3006 5.973899 TTTGCCAACATGACTGCTAATAA 57.026 34.783 0.00 0.00 0.00 1.40
2938 3009 5.009631 TGCCAACATGACTGCTAATAAACT 58.990 37.500 0.00 0.00 0.00 2.66
3011 3082 7.809806 AGAAATATAGCAAACAACAACTTCAGC 59.190 33.333 0.00 0.00 0.00 4.26
3068 3139 5.900123 AGACTTGAGGTAGGCACTATAACAT 59.100 40.000 0.00 0.00 45.60 2.71
3069 3140 7.014326 CAGACTTGAGGTAGGCACTATAACATA 59.986 40.741 0.00 0.00 45.60 2.29
3070 3141 7.730784 AGACTTGAGGTAGGCACTATAACATAT 59.269 37.037 0.00 0.00 45.60 1.78
3071 3142 8.263854 ACTTGAGGTAGGCACTATAACATATT 57.736 34.615 0.00 0.00 45.60 1.28
3072 3143 8.714906 ACTTGAGGTAGGCACTATAACATATTT 58.285 33.333 0.00 0.00 45.60 1.40
3073 3144 9.561069 CTTGAGGTAGGCACTATAACATATTTT 57.439 33.333 0.00 0.00 45.60 1.82
3200 3282 1.476652 CCACGGATTATCATGCCACCA 60.477 52.381 0.00 0.00 0.00 4.17
3224 3306 3.959991 GAGTCCGGTTGCTCAGCCC 62.960 68.421 0.00 0.00 0.00 5.19
3275 3357 1.065647 ATGGCCCTGAGGATGAGATG 58.934 55.000 0.00 0.00 33.47 2.90
3320 3402 2.597510 GGCCGGCAAACAGGTCTT 60.598 61.111 30.85 0.00 0.00 3.01
3341 3423 0.847373 TTGTAGGGTTGGCTGTTGGA 59.153 50.000 0.00 0.00 0.00 3.53
3362 3444 2.181021 GTGGCTGCTGCTTCATGC 59.819 61.111 15.64 0.00 43.25 4.06
3418 3500 5.710099 GTGTCCATAAAAGAAAGGATGGTGA 59.290 40.000 0.00 0.00 39.92 4.02
3423 3505 6.017109 CCATAAAAGAAAGGATGGTGATACCG 60.017 42.308 0.00 0.00 42.58 4.02
3494 3576 1.145759 TGCTCCTATTTCTTCGCGCG 61.146 55.000 26.76 26.76 0.00 6.86
3527 3609 7.416154 TCTCGTTACCATTTGAAGTAAACAG 57.584 36.000 0.00 0.00 30.64 3.16
3531 3613 6.425721 CGTTACCATTTGAAGTAAACAGAGGA 59.574 38.462 0.00 0.00 30.64 3.71
3557 3639 1.742308 AGGTTCCCTTGCAGTAGGAA 58.258 50.000 5.98 7.93 37.50 3.36
3558 3640 2.062636 AGGTTCCCTTGCAGTAGGAAA 58.937 47.619 13.80 0.00 41.21 3.13
3559 3641 2.160205 GGTTCCCTTGCAGTAGGAAAC 58.840 52.381 13.80 12.98 41.21 2.78
3560 3642 2.224793 GGTTCCCTTGCAGTAGGAAACT 60.225 50.000 17.67 0.00 42.91 2.66
3562 3644 4.254492 GTTCCCTTGCAGTAGGAAACTAG 58.746 47.826 13.80 0.00 45.49 2.57
3563 3645 2.838202 TCCCTTGCAGTAGGAAACTAGG 59.162 50.000 5.98 0.00 45.49 3.02
3564 3646 2.838202 CCCTTGCAGTAGGAAACTAGGA 59.162 50.000 5.98 0.00 45.49 2.94
3565 3647 3.263425 CCCTTGCAGTAGGAAACTAGGAA 59.737 47.826 5.98 0.00 45.49 3.36
3566 3648 4.080299 CCCTTGCAGTAGGAAACTAGGAAT 60.080 45.833 5.98 0.00 45.49 3.01
3567 3649 5.130477 CCCTTGCAGTAGGAAACTAGGAATA 59.870 44.000 5.98 0.00 45.49 1.75
3568 3650 6.284459 CCTTGCAGTAGGAAACTAGGAATAG 58.716 44.000 0.00 0.00 45.49 1.73
3571 3653 6.437755 TGCAGTAGGAAACTAGGAATAGGTA 58.562 40.000 0.00 0.00 45.49 3.08
3581 3663 9.761504 GAAACTAGGAATAGGTATGAGGTAAAC 57.238 37.037 0.00 0.00 0.00 2.01
3587 3669 9.670442 AGGAATAGGTATGAGGTAAACTGAATA 57.330 33.333 0.00 0.00 0.00 1.75
3598 3680 9.793259 TGAGGTAAACTGAATAAAGAATCTGTT 57.207 29.630 0.00 0.00 38.75 3.16
3613 3695 9.463443 AAAGAATCTGTTATTTTCCTGTTTTCG 57.537 29.630 0.00 0.00 0.00 3.46
3747 3833 7.906010 CGTTTCTTTTTGTGTGTGTGTAGATTA 59.094 33.333 0.00 0.00 0.00 1.75
3759 3845 8.552865 TGTGTGTGTAGATTATAACAACAACAC 58.447 33.333 19.27 19.27 37.18 3.32
3937 4023 5.594725 CAGCTTCTGTCAAGATACCCTACTA 59.405 44.000 0.00 0.00 30.72 1.82
4136 4259 4.100373 AGATAGACAGTGCTTCCCTTTCT 58.900 43.478 0.00 0.00 0.00 2.52
4220 4343 1.870901 CGTGTCGCTTACGGGCTAC 60.871 63.158 0.00 0.00 40.63 3.58
4259 4382 5.533903 CCAAAGGCTTCTTGTATATGAGCAT 59.466 40.000 0.00 0.00 0.00 3.79
4294 4417 4.516323 ACACTGCATGATATGTTGCACTA 58.484 39.130 0.00 0.00 43.54 2.74
4295 4418 5.128205 ACACTGCATGATATGTTGCACTAT 58.872 37.500 0.00 0.00 43.54 2.12
4298 4421 5.240183 ACTGCATGATATGTTGCACTATTCC 59.760 40.000 0.00 0.00 43.54 3.01
4304 4427 6.287525 TGATATGTTGCACTATTCCGATGAA 58.712 36.000 0.00 0.00 34.33 2.57
4309 4432 1.789464 GCACTATTCCGATGAAGCGAG 59.211 52.381 0.00 0.00 33.05 5.03
4315 4438 0.246360 TCCGATGAAGCGAGCAAGAA 59.754 50.000 0.00 0.00 0.00 2.52
4320 4443 2.831685 TGAAGCGAGCAAGAACCTTA 57.168 45.000 0.00 0.00 0.00 2.69
4322 4445 2.224185 TGAAGCGAGCAAGAACCTTACA 60.224 45.455 0.00 0.00 0.00 2.41
4334 4457 2.469516 CCTTACATGGAACGCCCGC 61.470 63.158 0.00 0.00 37.93 6.13
4427 4551 2.838736 TCACTCTGCACTTTTCTGGTC 58.161 47.619 0.00 0.00 0.00 4.02
4435 4559 2.223479 GCACTTTTCTGGTCAAGCGAAA 60.223 45.455 0.00 0.00 0.00 3.46
4563 4688 0.738762 CAGCCCACATCTGTCTGACG 60.739 60.000 2.98 0.00 0.00 4.35
4565 4690 1.448540 CCCACATCTGTCTGACGCC 60.449 63.158 2.98 0.00 0.00 5.68
4636 4761 0.301687 GCAACATACTGCGGATGTCG 59.698 55.000 0.00 0.00 36.50 4.35
4694 4820 7.262772 TGTTAGTTGGACTAAATCAGGTATCG 58.737 38.462 2.37 0.00 41.80 2.92
5134 5260 8.233190 CAGGTACATCATTTTCTTTTCTCTCAC 58.767 37.037 0.00 0.00 0.00 3.51
5185 5311 5.938883 GCTTGCAGCTAAAATATGAACAC 57.061 39.130 0.00 0.00 38.45 3.32
5199 5325 6.683974 ATATGAACACCATTCACTAGCAAC 57.316 37.500 0.00 0.00 36.71 4.17
5305 5431 3.963129 CTCTTCAGAGAGGTAGACTGGT 58.037 50.000 0.00 0.00 44.69 4.00
5306 5432 5.105567 CTCTTCAGAGAGGTAGACTGGTA 57.894 47.826 0.00 0.00 44.69 3.25
5307 5433 5.105567 TCTTCAGAGAGGTAGACTGGTAG 57.894 47.826 0.00 0.00 33.19 3.18
5308 5434 4.783763 TCTTCAGAGAGGTAGACTGGTAGA 59.216 45.833 0.00 0.00 33.19 2.59
5424 5550 2.158900 GCAGAGGGCTAGCATGTTAAGA 60.159 50.000 18.24 0.00 40.25 2.10
5545 5671 5.939764 AACCAGAGCTGTATCAGAACATA 57.060 39.130 0.00 0.00 32.44 2.29
5546 5672 5.528043 ACCAGAGCTGTATCAGAACATAG 57.472 43.478 0.00 0.00 32.44 2.23
5547 5673 4.959210 ACCAGAGCTGTATCAGAACATAGT 59.041 41.667 0.00 0.00 32.44 2.12
5619 5748 2.293170 GGTATTTCAGGAGCTTCAGCC 58.707 52.381 0.00 0.00 43.38 4.85
5644 5773 7.606456 CCTATCTGTTTGTACCAAATACACTGT 59.394 37.037 0.00 0.00 43.71 3.55
5647 5776 6.481976 TCTGTTTGTACCAAATACACTGTGAG 59.518 38.462 15.86 0.00 43.71 3.51
5648 5777 5.529430 TGTTTGTACCAAATACACTGTGAGG 59.471 40.000 15.86 10.02 43.71 3.86
5751 5885 5.458041 AGGATTTGTGACAAGTTGAATGG 57.542 39.130 10.54 0.00 0.00 3.16
5778 5912 2.910479 TGTCAGACGGCGACCTGT 60.910 61.111 24.32 0.57 32.15 4.00
5795 5929 3.218470 TGTGTGCCTTGCCAGTGC 61.218 61.111 0.00 0.00 38.26 4.40
5854 5988 2.688507 AGCTTGTCACGTCCTAACATG 58.311 47.619 0.00 0.00 0.00 3.21
5862 5999 5.417894 TGTCACGTCCTAACATGTATCTTCT 59.582 40.000 0.00 0.00 0.00 2.85
5871 6008 8.717821 TCCTAACATGTATCTTCTTTTCAAACG 58.282 33.333 0.00 0.00 0.00 3.60
6009 6148 1.862201 TGTCGCTCAACGTTTCGAATT 59.138 42.857 15.59 0.00 44.19 2.17
6020 6161 7.036829 TCAACGTTTCGAATTCTGATACCATA 58.963 34.615 0.00 0.00 0.00 2.74
6062 6203 1.608283 CGGACTGAACCCTTGACCTTC 60.608 57.143 0.00 0.00 0.00 3.46
6069 6210 1.142688 ACCCTTGACCTTCAGCCCAT 61.143 55.000 0.00 0.00 0.00 4.00
6073 6214 0.040058 TTGACCTTCAGCCCATGCAT 59.960 50.000 0.00 0.00 41.13 3.96
6075 6216 0.682209 GACCTTCAGCCCATGCATGT 60.682 55.000 24.58 4.09 41.13 3.21
6080 6221 1.179152 TCAGCCCATGCATGTTGAAG 58.821 50.000 24.58 9.25 41.13 3.02
6094 6251 5.469479 CATGTTGAAGGACCAATAACCAAC 58.531 41.667 0.00 0.00 34.66 3.77
6100 6257 2.241430 AGGACCAATAACCAACTAGGCC 59.759 50.000 0.00 0.00 43.14 5.19
6109 6266 0.250901 CCAACTAGGCCAGCAACACT 60.251 55.000 5.01 0.00 0.00 3.55
6138 6295 9.953825 GCGATTTATTAATAGGTTACATCGAAG 57.046 33.333 15.73 0.00 0.00 3.79
6226 6383 3.745975 TGTCACGAATGAACTGATGAACC 59.254 43.478 0.00 0.00 36.31 3.62
6228 6385 2.094258 CACGAATGAACTGATGAACCGG 59.906 50.000 0.00 0.00 0.00 5.28
6234 6391 1.827399 AACTGATGAACCGGCGGTCT 61.827 55.000 34.23 21.99 33.12 3.85
6235 6392 1.811266 CTGATGAACCGGCGGTCTG 60.811 63.158 34.23 19.08 33.12 3.51
6239 6396 4.754667 GAACCGGCGGTCTGACCC 62.755 72.222 34.23 13.28 33.12 4.46
6247 6404 2.231820 CGGTCTGACCCGTGAAAAC 58.768 57.895 20.68 0.00 43.07 2.43
6248 6405 1.226030 CGGTCTGACCCGTGAAAACC 61.226 60.000 20.68 0.00 43.07 3.27
6252 6409 3.469739 GTCTGACCCGTGAAAACCTAAA 58.530 45.455 0.00 0.00 0.00 1.85
6253 6410 3.249320 GTCTGACCCGTGAAAACCTAAAC 59.751 47.826 0.00 0.00 0.00 2.01
6254 6411 3.118334 TCTGACCCGTGAAAACCTAAACA 60.118 43.478 0.00 0.00 0.00 2.83
6255 6412 3.618351 TGACCCGTGAAAACCTAAACAA 58.382 40.909 0.00 0.00 0.00 2.83
6256 6413 3.628487 TGACCCGTGAAAACCTAAACAAG 59.372 43.478 0.00 0.00 0.00 3.16
6257 6414 3.878699 GACCCGTGAAAACCTAAACAAGA 59.121 43.478 0.00 0.00 0.00 3.02
6258 6415 4.466827 ACCCGTGAAAACCTAAACAAGAT 58.533 39.130 0.00 0.00 0.00 2.40
6259 6416 4.891168 ACCCGTGAAAACCTAAACAAGATT 59.109 37.500 0.00 0.00 0.00 2.40
6273 6430 5.948992 AACAAGATTACAAGAAGCCTCAC 57.051 39.130 0.00 0.00 0.00 3.51
6274 6431 5.234466 ACAAGATTACAAGAAGCCTCACT 57.766 39.130 0.00 0.00 0.00 3.41
6277 6434 3.584848 AGATTACAAGAAGCCTCACTGGT 59.415 43.478 0.00 0.00 38.35 4.00
6290 6447 4.131596 CCTCACTGGTTCGGTTTTCTAAA 58.868 43.478 0.00 0.00 0.00 1.85
6301 6458 6.662414 TCGGTTTTCTAAACTATGCATGAG 57.338 37.500 10.16 5.59 0.00 2.90
6305 6462 6.374333 GGTTTTCTAAACTATGCATGAGACCA 59.626 38.462 10.16 0.00 0.00 4.02
6306 6463 7.414540 GGTTTTCTAAACTATGCATGAGACCAG 60.415 40.741 10.16 0.00 0.00 4.00
6307 6464 4.697514 TCTAAACTATGCATGAGACCAGC 58.302 43.478 10.16 0.00 0.00 4.85
6309 6466 0.105593 ACTATGCATGAGACCAGCCG 59.894 55.000 10.16 0.00 0.00 5.52
6311 6468 1.689243 TATGCATGAGACCAGCCGCT 61.689 55.000 10.16 0.00 0.00 5.52
6313 6470 2.898738 CATGAGACCAGCCGCTCT 59.101 61.111 0.00 0.00 32.44 4.09
6316 6473 0.106469 ATGAGACCAGCCGCTCTCTA 60.106 55.000 8.97 0.00 34.99 2.43
6318 6475 1.036707 GAGACCAGCCGCTCTCTATT 58.963 55.000 0.00 0.00 31.74 1.73
6320 6477 1.137872 AGACCAGCCGCTCTCTATTTG 59.862 52.381 0.00 0.00 0.00 2.32
6322 6479 0.462581 CCAGCCGCTCTCTATTTGCA 60.463 55.000 0.00 0.00 0.00 4.08
6323 6480 1.372582 CAGCCGCTCTCTATTTGCAA 58.627 50.000 0.00 0.00 0.00 4.08
6324 6481 1.739466 CAGCCGCTCTCTATTTGCAAA 59.261 47.619 15.44 15.44 0.00 3.68
6357 6514 0.958822 AAATTGTTCCACTGCGTCCC 59.041 50.000 0.00 0.00 0.00 4.46
6358 6515 1.234615 AATTGTTCCACTGCGTCCCG 61.235 55.000 0.00 0.00 0.00 5.14
6360 6517 3.998672 GTTCCACTGCGTCCCGGA 61.999 66.667 0.73 0.00 0.00 5.14
6367 6528 1.890041 CTGCGTCCCGGAACACAAA 60.890 57.895 0.73 0.00 0.00 2.83
6378 6539 4.376146 CCGGAACACAAACCAAATCATTT 58.624 39.130 0.00 0.00 0.00 2.32
6397 6558 7.048000 TCATTTTTCATTTCTAATGTTGCGC 57.952 32.000 0.00 0.00 31.59 6.09
6427 6588 0.389556 GGTCCTCTTTCGAACCGGAC 60.390 60.000 22.28 22.28 42.57 4.79
6450 6611 5.180492 ACACCGGTATGTTTTGAATGTGTAG 59.820 40.000 6.87 0.00 33.09 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.728971 GCCAGTCAAGAAGTCATCGTG 59.271 52.381 0.00 0.00 38.69 4.35
58 60 4.222847 GTCATCGCCCGACCCTCC 62.223 72.222 0.00 0.00 0.00 4.30
59 61 4.570663 CGTCATCGCCCGACCCTC 62.571 72.222 0.00 0.00 0.00 4.30
85 87 1.508545 CTCTCGAGCAAGCCGAAGA 59.491 57.895 7.81 6.22 35.48 2.87
156 160 2.904434 AGGGTGGTACAAGGAACACTAG 59.096 50.000 0.00 0.00 44.16 2.57
158 162 1.815757 AGGGTGGTACAAGGAACACT 58.184 50.000 0.00 0.00 44.16 3.55
161 165 3.775261 TGTTAGGGTGGTACAAGGAAC 57.225 47.619 0.00 0.00 44.16 3.62
172 176 9.981114 AGAAAAACTTAATCATTTGTTAGGGTG 57.019 29.630 0.00 0.00 0.00 4.61
207 211 5.791141 AGGGTATTCTCTAACCTTCTTTGGT 59.209 40.000 0.00 0.00 43.11 3.67
209 213 6.947464 TCAGGGTATTCTCTAACCTTCTTTG 58.053 40.000 0.00 0.00 35.97 2.77
211 215 6.157123 CCTTCAGGGTATTCTCTAACCTTCTT 59.843 42.308 0.00 0.00 35.97 2.52
269 273 0.183014 CGGCTAGAGAGGACCAGGTA 59.817 60.000 0.00 0.00 0.00 3.08
295 299 5.900699 TCTATGTTACTACCCATTGTGGCTA 59.099 40.000 0.00 0.00 35.79 3.93
296 300 4.719773 TCTATGTTACTACCCATTGTGGCT 59.280 41.667 0.00 0.00 35.79 4.75
297 301 5.031066 TCTATGTTACTACCCATTGTGGC 57.969 43.478 0.00 0.00 35.79 5.01
298 302 6.049149 CACTCTATGTTACTACCCATTGTGG 58.951 44.000 0.00 0.00 37.25 4.17
299 303 6.049149 CCACTCTATGTTACTACCCATTGTG 58.951 44.000 0.00 0.00 0.00 3.33
300 304 5.724854 ACCACTCTATGTTACTACCCATTGT 59.275 40.000 0.00 0.00 0.00 2.71
301 305 6.235231 ACCACTCTATGTTACTACCCATTG 57.765 41.667 0.00 0.00 0.00 2.82
302 306 7.400915 TGTTACCACTCTATGTTACTACCCATT 59.599 37.037 0.00 0.00 0.00 3.16
303 307 6.899075 TGTTACCACTCTATGTTACTACCCAT 59.101 38.462 0.00 0.00 0.00 4.00
304 308 6.255287 TGTTACCACTCTATGTTACTACCCA 58.745 40.000 0.00 0.00 0.00 4.51
305 309 6.780457 TGTTACCACTCTATGTTACTACCC 57.220 41.667 0.00 0.00 0.00 3.69
306 310 7.208080 CCATGTTACCACTCTATGTTACTACC 58.792 42.308 0.00 0.00 0.00 3.18
307 311 7.208080 CCCATGTTACCACTCTATGTTACTAC 58.792 42.308 0.00 0.00 0.00 2.73
308 312 6.183360 GCCCATGTTACCACTCTATGTTACTA 60.183 42.308 0.00 0.00 0.00 1.82
309 313 5.396436 GCCCATGTTACCACTCTATGTTACT 60.396 44.000 0.00 0.00 0.00 2.24
310 314 4.814771 GCCCATGTTACCACTCTATGTTAC 59.185 45.833 0.00 0.00 0.00 2.50
311 315 4.471747 TGCCCATGTTACCACTCTATGTTA 59.528 41.667 0.00 0.00 0.00 2.41
312 316 3.265737 TGCCCATGTTACCACTCTATGTT 59.734 43.478 0.00 0.00 0.00 2.71
313 317 2.843730 TGCCCATGTTACCACTCTATGT 59.156 45.455 0.00 0.00 0.00 2.29
314 318 3.558931 TGCCCATGTTACCACTCTATG 57.441 47.619 0.00 0.00 0.00 2.23
315 319 4.090761 CATGCCCATGTTACCACTCTAT 57.909 45.455 0.13 0.00 34.23 1.98
316 320 3.558931 CATGCCCATGTTACCACTCTA 57.441 47.619 0.13 0.00 34.23 2.43
317 321 2.425143 CATGCCCATGTTACCACTCT 57.575 50.000 0.13 0.00 34.23 3.24
327 331 5.858381 ACATAGAGTAGTAACATGCCCATG 58.142 41.667 6.71 6.71 44.15 3.66
328 332 6.500589 AACATAGAGTAGTAACATGCCCAT 57.499 37.500 0.00 0.00 0.00 4.00
329 333 5.950544 AACATAGAGTAGTAACATGCCCA 57.049 39.130 0.00 0.00 0.00 5.36
330 334 7.052142 AGTAACATAGAGTAGTAACATGCCC 57.948 40.000 0.00 0.00 0.00 5.36
331 335 8.081025 GGTAGTAACATAGAGTAGTAACATGCC 58.919 40.741 0.00 0.00 0.00 4.40
332 336 8.848182 AGGTAGTAACATAGAGTAGTAACATGC 58.152 37.037 0.00 0.00 0.00 4.06
342 346 8.384718 CCCACTATAGAGGTAGTAACATAGAGT 58.615 40.741 14.29 0.00 33.29 3.24
343 347 8.604184 TCCCACTATAGAGGTAGTAACATAGAG 58.396 40.741 14.29 0.00 33.29 2.43
344 348 8.515927 TCCCACTATAGAGGTAGTAACATAGA 57.484 38.462 14.29 0.00 33.29 1.98
345 349 9.233649 CTTCCCACTATAGAGGTAGTAACATAG 57.766 40.741 14.29 0.00 33.29 2.23
346 350 8.730948 ACTTCCCACTATAGAGGTAGTAACATA 58.269 37.037 17.73 0.00 33.29 2.29
347 351 7.593653 ACTTCCCACTATAGAGGTAGTAACAT 58.406 38.462 17.73 1.67 33.29 2.71
348 352 6.978261 ACTTCCCACTATAGAGGTAGTAACA 58.022 40.000 17.73 0.00 33.29 2.41
349 353 8.845227 GTTACTTCCCACTATAGAGGTAGTAAC 58.155 40.741 31.13 31.13 40.31 2.50
350 354 8.560039 TGTTACTTCCCACTATAGAGGTAGTAA 58.440 37.037 24.67 24.67 33.29 2.24
351 355 8.106017 TGTTACTTCCCACTATAGAGGTAGTA 57.894 38.462 19.39 19.39 33.29 1.82
352 356 6.978261 TGTTACTTCCCACTATAGAGGTAGT 58.022 40.000 20.74 20.74 35.34 2.73
353 357 9.756571 ATATGTTACTTCCCACTATAGAGGTAG 57.243 37.037 14.29 14.29 0.00 3.18
354 358 9.529823 CATATGTTACTTCCCACTATAGAGGTA 57.470 37.037 14.29 0.00 0.00 3.08
355 359 8.011290 ACATATGTTACTTCCCACTATAGAGGT 58.989 37.037 14.29 0.00 0.00 3.85
356 360 8.307483 CACATATGTTACTTCCCACTATAGAGG 58.693 40.741 5.37 8.10 0.00 3.69
357 361 8.861086 ACACATATGTTACTTCCCACTATAGAG 58.139 37.037 5.37 0.00 34.46 2.43
358 362 8.638873 CACACATATGTTACTTCCCACTATAGA 58.361 37.037 5.37 0.00 36.72 1.98
359 363 7.872993 CCACACATATGTTACTTCCCACTATAG 59.127 40.741 5.37 0.00 36.72 1.31
360 364 7.346175 ACCACACATATGTTACTTCCCACTATA 59.654 37.037 5.37 0.00 36.72 1.31
361 365 6.157994 ACCACACATATGTTACTTCCCACTAT 59.842 38.462 5.37 0.00 36.72 2.12
362 366 5.486063 ACCACACATATGTTACTTCCCACTA 59.514 40.000 5.37 0.00 36.72 2.74
363 367 4.288626 ACCACACATATGTTACTTCCCACT 59.711 41.667 5.37 0.00 36.72 4.00
364 368 4.585879 ACCACACATATGTTACTTCCCAC 58.414 43.478 5.37 0.00 36.72 4.61
365 369 4.919774 ACCACACATATGTTACTTCCCA 57.080 40.909 5.37 0.00 36.72 4.37
366 370 6.174760 TGTTACCACACATATGTTACTTCCC 58.825 40.000 5.37 0.00 36.72 3.97
367 371 7.678690 GCATGTTACCACACATATGTTACTTCC 60.679 40.741 5.37 0.00 36.72 3.46
368 372 7.148323 TGCATGTTACCACACATATGTTACTTC 60.148 37.037 5.37 0.00 36.72 3.01
369 373 6.657117 TGCATGTTACCACACATATGTTACTT 59.343 34.615 5.37 0.00 36.72 2.24
370 374 6.176896 TGCATGTTACCACACATATGTTACT 58.823 36.000 5.37 0.00 36.72 2.24
371 375 6.429791 TGCATGTTACCACACATATGTTAC 57.570 37.500 5.37 0.00 36.72 2.50
372 376 7.637631 ATTGCATGTTACCACACATATGTTA 57.362 32.000 5.37 0.00 36.72 2.41
373 377 5.973899 TTGCATGTTACCACACATATGTT 57.026 34.783 5.37 0.00 36.72 2.71
374 378 6.828273 AGTATTGCATGTTACCACACATATGT 59.172 34.615 1.41 1.41 40.80 2.29
375 379 7.263100 AGTATTGCATGTTACCACACATATG 57.737 36.000 0.00 0.00 35.51 1.78
376 380 7.880160 AAGTATTGCATGTTACCACACATAT 57.120 32.000 0.00 0.00 35.51 1.78
377 381 7.695480 AAAGTATTGCATGTTACCACACATA 57.305 32.000 0.00 0.00 35.51 2.29
378 382 6.588719 AAAGTATTGCATGTTACCACACAT 57.411 33.333 0.00 0.00 37.93 3.21
379 383 7.695480 ATAAAGTATTGCATGTTACCACACA 57.305 32.000 0.00 0.00 35.03 3.72
380 384 8.980143 AAATAAAGTATTGCATGTTACCACAC 57.020 30.769 0.00 0.00 35.03 3.82
406 410 9.217278 CAAAGCAAGATGAGTCTATAGCATAAT 57.783 33.333 0.00 0.00 33.30 1.28
407 411 7.658982 CCAAAGCAAGATGAGTCTATAGCATAA 59.341 37.037 0.00 0.00 33.30 1.90
408 412 7.157347 CCAAAGCAAGATGAGTCTATAGCATA 58.843 38.462 0.00 0.00 33.30 3.14
409 413 5.996513 CCAAAGCAAGATGAGTCTATAGCAT 59.003 40.000 0.00 0.00 33.30 3.79
410 414 5.104776 ACCAAAGCAAGATGAGTCTATAGCA 60.105 40.000 0.00 0.00 33.30 3.49
411 415 5.363939 ACCAAAGCAAGATGAGTCTATAGC 58.636 41.667 0.00 0.00 33.30 2.97
412 416 8.147058 ACATACCAAAGCAAGATGAGTCTATAG 58.853 37.037 0.00 0.00 33.30 1.31
413 417 7.928167 CACATACCAAAGCAAGATGAGTCTATA 59.072 37.037 0.00 0.00 33.30 1.31
414 418 6.765036 CACATACCAAAGCAAGATGAGTCTAT 59.235 38.462 0.00 0.00 33.30 1.98
415 419 6.108687 CACATACCAAAGCAAGATGAGTCTA 58.891 40.000 0.00 0.00 33.30 2.59
416 420 4.940046 CACATACCAAAGCAAGATGAGTCT 59.060 41.667 0.00 0.00 35.82 3.24
417 421 4.697352 ACACATACCAAAGCAAGATGAGTC 59.303 41.667 0.00 0.00 0.00 3.36
418 422 4.456911 CACACATACCAAAGCAAGATGAGT 59.543 41.667 0.00 0.00 0.00 3.41
419 423 4.696877 TCACACATACCAAAGCAAGATGAG 59.303 41.667 0.00 0.00 0.00 2.90
420 424 4.650734 TCACACATACCAAAGCAAGATGA 58.349 39.130 0.00 0.00 0.00 2.92
421 425 5.106038 ACATCACACATACCAAAGCAAGATG 60.106 40.000 0.00 0.00 36.24 2.90
422 426 5.012239 ACATCACACATACCAAAGCAAGAT 58.988 37.500 0.00 0.00 0.00 2.40
423 427 4.397420 ACATCACACATACCAAAGCAAGA 58.603 39.130 0.00 0.00 0.00 3.02
424 428 4.771590 ACATCACACATACCAAAGCAAG 57.228 40.909 0.00 0.00 0.00 4.01
425 429 5.532779 TGTAACATCACACATACCAAAGCAA 59.467 36.000 0.00 0.00 0.00 3.91
426 430 5.066593 TGTAACATCACACATACCAAAGCA 58.933 37.500 0.00 0.00 0.00 3.91
427 431 5.181245 ACTGTAACATCACACATACCAAAGC 59.819 40.000 0.00 0.00 0.00 3.51
428 432 6.801539 ACTGTAACATCACACATACCAAAG 57.198 37.500 0.00 0.00 0.00 2.77
429 433 7.934665 AGTTACTGTAACATCACACATACCAAA 59.065 33.333 27.12 0.00 41.07 3.28
430 434 7.446769 AGTTACTGTAACATCACACATACCAA 58.553 34.615 27.12 0.00 41.07 3.67
431 435 6.999950 AGTTACTGTAACATCACACATACCA 58.000 36.000 27.12 0.00 41.07 3.25
432 436 7.222224 GCTAGTTACTGTAACATCACACATACC 59.778 40.741 27.12 1.55 41.07 2.73
433 437 7.974501 AGCTAGTTACTGTAACATCACACATAC 59.025 37.037 27.12 8.69 41.07 2.39
434 438 8.063200 AGCTAGTTACTGTAACATCACACATA 57.937 34.615 27.12 11.12 41.07 2.29
435 439 6.936279 AGCTAGTTACTGTAACATCACACAT 58.064 36.000 27.12 10.64 41.07 3.21
436 440 6.340962 AGCTAGTTACTGTAACATCACACA 57.659 37.500 27.12 7.11 41.07 3.72
437 441 8.027771 ACTTAGCTAGTTACTGTAACATCACAC 58.972 37.037 27.12 13.16 41.07 3.82
438 442 8.118976 ACTTAGCTAGTTACTGTAACATCACA 57.881 34.615 27.12 10.61 41.07 3.58
439 443 8.983307 AACTTAGCTAGTTACTGTAACATCAC 57.017 34.615 27.12 15.70 45.22 3.06
453 457 8.771286 AGAGGTAGTTCTAGTAACTTAGCTAGT 58.229 37.037 11.25 0.00 39.32 2.57
454 458 9.264719 GAGAGGTAGTTCTAGTAACTTAGCTAG 57.735 40.741 11.25 0.00 36.83 3.42
455 459 8.991275 AGAGAGGTAGTTCTAGTAACTTAGCTA 58.009 37.037 11.25 0.00 0.00 3.32
456 460 7.864770 AGAGAGGTAGTTCTAGTAACTTAGCT 58.135 38.462 11.25 0.00 0.00 3.32
457 461 8.510243 AAGAGAGGTAGTTCTAGTAACTTAGC 57.490 38.462 11.25 8.22 0.00 3.09
460 464 9.364653 TGAAAAGAGAGGTAGTTCTAGTAACTT 57.635 33.333 11.25 0.00 0.00 2.66
461 465 8.937207 TGAAAAGAGAGGTAGTTCTAGTAACT 57.063 34.615 10.91 10.91 0.00 2.24
468 472 8.871125 TGAGTTAATGAAAAGAGAGGTAGTTCT 58.129 33.333 0.00 0.00 0.00 3.01
469 473 9.660180 ATGAGTTAATGAAAAGAGAGGTAGTTC 57.340 33.333 0.00 0.00 0.00 3.01
471 475 9.442047 CAATGAGTTAATGAAAAGAGAGGTAGT 57.558 33.333 0.00 0.00 0.00 2.73
472 476 8.394121 GCAATGAGTTAATGAAAAGAGAGGTAG 58.606 37.037 0.00 0.00 0.00 3.18
473 477 7.336931 GGCAATGAGTTAATGAAAAGAGAGGTA 59.663 37.037 0.00 0.00 0.00 3.08
474 478 6.151817 GGCAATGAGTTAATGAAAAGAGAGGT 59.848 38.462 0.00 0.00 0.00 3.85
475 479 6.151648 TGGCAATGAGTTAATGAAAAGAGAGG 59.848 38.462 0.00 0.00 0.00 3.69
476 480 7.025963 GTGGCAATGAGTTAATGAAAAGAGAG 58.974 38.462 0.00 0.00 0.00 3.20
477 481 6.489700 TGTGGCAATGAGTTAATGAAAAGAGA 59.510 34.615 0.00 0.00 0.00 3.10
478 482 6.680810 TGTGGCAATGAGTTAATGAAAAGAG 58.319 36.000 0.00 0.00 0.00 2.85
479 483 6.647334 TGTGGCAATGAGTTAATGAAAAGA 57.353 33.333 0.00 0.00 0.00 2.52
480 484 8.461222 TCTATGTGGCAATGAGTTAATGAAAAG 58.539 33.333 0.00 0.00 0.00 2.27
481 485 8.243426 GTCTATGTGGCAATGAGTTAATGAAAA 58.757 33.333 0.00 0.00 0.00 2.29
482 486 7.392953 TGTCTATGTGGCAATGAGTTAATGAAA 59.607 33.333 0.00 0.00 0.00 2.69
483 487 6.883756 TGTCTATGTGGCAATGAGTTAATGAA 59.116 34.615 0.00 0.00 0.00 2.57
484 488 6.413892 TGTCTATGTGGCAATGAGTTAATGA 58.586 36.000 0.00 0.00 0.00 2.57
485 489 6.682423 TGTCTATGTGGCAATGAGTTAATG 57.318 37.500 0.00 0.00 0.00 1.90
486 490 7.701539 TTTGTCTATGTGGCAATGAGTTAAT 57.298 32.000 0.00 0.00 40.27 1.40
487 491 7.701539 ATTTGTCTATGTGGCAATGAGTTAA 57.298 32.000 0.00 0.00 40.27 2.01
488 492 7.701539 AATTTGTCTATGTGGCAATGAGTTA 57.298 32.000 0.00 0.00 40.27 2.24
489 493 6.594788 AATTTGTCTATGTGGCAATGAGTT 57.405 33.333 0.00 0.00 40.27 3.01
490 494 6.392354 CAAATTTGTCTATGTGGCAATGAGT 58.608 36.000 10.15 0.00 40.27 3.41
491 495 5.290158 GCAAATTTGTCTATGTGGCAATGAG 59.710 40.000 19.03 0.00 40.27 2.90
492 496 5.047164 AGCAAATTTGTCTATGTGGCAATGA 60.047 36.000 19.03 0.00 40.27 2.57
493 497 5.062934 CAGCAAATTTGTCTATGTGGCAATG 59.937 40.000 19.03 0.10 40.27 2.82
494 498 5.047164 TCAGCAAATTTGTCTATGTGGCAAT 60.047 36.000 19.03 0.00 40.27 3.56
495 499 4.280425 TCAGCAAATTTGTCTATGTGGCAA 59.720 37.500 19.03 0.00 38.67 4.52
496 500 3.825585 TCAGCAAATTTGTCTATGTGGCA 59.174 39.130 19.03 0.00 0.00 4.92
497 501 4.082571 ACTCAGCAAATTTGTCTATGTGGC 60.083 41.667 19.03 1.86 0.00 5.01
498 502 5.633830 ACTCAGCAAATTTGTCTATGTGG 57.366 39.130 19.03 11.82 0.00 4.17
499 503 5.860182 CCAACTCAGCAAATTTGTCTATGTG 59.140 40.000 19.03 14.49 0.00 3.21
500 504 5.769662 TCCAACTCAGCAAATTTGTCTATGT 59.230 36.000 19.03 13.81 0.00 2.29
501 505 6.072286 AGTCCAACTCAGCAAATTTGTCTATG 60.072 38.462 19.03 12.62 0.00 2.23
502 506 6.006449 AGTCCAACTCAGCAAATTTGTCTAT 58.994 36.000 19.03 1.31 0.00 1.98
503 507 5.376625 AGTCCAACTCAGCAAATTTGTCTA 58.623 37.500 19.03 4.50 0.00 2.59
504 508 4.210331 AGTCCAACTCAGCAAATTTGTCT 58.790 39.130 19.03 13.38 0.00 3.41
505 509 4.574599 AGTCCAACTCAGCAAATTTGTC 57.425 40.909 19.03 11.45 0.00 3.18
506 510 4.402155 TCAAGTCCAACTCAGCAAATTTGT 59.598 37.500 19.03 3.98 0.00 2.83
507 511 4.935702 TCAAGTCCAACTCAGCAAATTTG 58.064 39.130 14.03 14.03 0.00 2.32
508 512 5.127682 ACTTCAAGTCCAACTCAGCAAATTT 59.872 36.000 0.00 0.00 0.00 1.82
509 513 4.646492 ACTTCAAGTCCAACTCAGCAAATT 59.354 37.500 0.00 0.00 0.00 1.82
510 514 4.210331 ACTTCAAGTCCAACTCAGCAAAT 58.790 39.130 0.00 0.00 0.00 2.32
511 515 3.620488 ACTTCAAGTCCAACTCAGCAAA 58.380 40.909 0.00 0.00 0.00 3.68
512 516 3.281727 ACTTCAAGTCCAACTCAGCAA 57.718 42.857 0.00 0.00 0.00 3.91
513 517 3.281727 AACTTCAAGTCCAACTCAGCA 57.718 42.857 0.00 0.00 0.00 4.41
514 518 4.212214 CAGTAACTTCAAGTCCAACTCAGC 59.788 45.833 0.00 0.00 0.00 4.26
515 519 4.212214 GCAGTAACTTCAAGTCCAACTCAG 59.788 45.833 0.00 0.00 0.00 3.35
516 520 4.127171 GCAGTAACTTCAAGTCCAACTCA 58.873 43.478 0.00 0.00 0.00 3.41
517 521 4.212214 CAGCAGTAACTTCAAGTCCAACTC 59.788 45.833 0.00 0.00 0.00 3.01
518 522 4.130118 CAGCAGTAACTTCAAGTCCAACT 58.870 43.478 0.00 0.00 0.00 3.16
519 523 4.127171 TCAGCAGTAACTTCAAGTCCAAC 58.873 43.478 0.00 0.00 0.00 3.77
520 524 4.415881 TCAGCAGTAACTTCAAGTCCAA 57.584 40.909 0.00 0.00 0.00 3.53
521 525 4.415881 TTCAGCAGTAACTTCAAGTCCA 57.584 40.909 0.00 0.00 0.00 4.02
522 526 5.948992 ATTTCAGCAGTAACTTCAAGTCC 57.051 39.130 0.00 0.00 0.00 3.85
523 527 8.089115 AGTAATTTCAGCAGTAACTTCAAGTC 57.911 34.615 0.00 0.00 0.00 3.01
524 528 7.173390 GGAGTAATTTCAGCAGTAACTTCAAGT 59.827 37.037 0.00 0.00 0.00 3.16
525 529 7.361286 GGGAGTAATTTCAGCAGTAACTTCAAG 60.361 40.741 0.00 0.00 0.00 3.02
526 530 6.430000 GGGAGTAATTTCAGCAGTAACTTCAA 59.570 38.462 0.00 0.00 0.00 2.69
527 531 5.938125 GGGAGTAATTTCAGCAGTAACTTCA 59.062 40.000 0.00 0.00 0.00 3.02
528 532 5.938125 TGGGAGTAATTTCAGCAGTAACTTC 59.062 40.000 0.00 0.00 0.00 3.01
529 533 5.705905 GTGGGAGTAATTTCAGCAGTAACTT 59.294 40.000 0.00 0.00 0.00 2.66
530 534 5.013183 AGTGGGAGTAATTTCAGCAGTAACT 59.987 40.000 0.00 0.00 0.00 2.24
531 535 5.122396 CAGTGGGAGTAATTTCAGCAGTAAC 59.878 44.000 0.00 0.00 0.00 2.50
532 536 5.221843 ACAGTGGGAGTAATTTCAGCAGTAA 60.222 40.000 0.00 0.00 0.00 2.24
533 537 4.286032 ACAGTGGGAGTAATTTCAGCAGTA 59.714 41.667 0.00 0.00 0.00 2.74
534 538 3.073062 ACAGTGGGAGTAATTTCAGCAGT 59.927 43.478 0.00 0.00 0.00 4.40
535 539 3.438087 CACAGTGGGAGTAATTTCAGCAG 59.562 47.826 0.00 0.00 0.00 4.24
536 540 3.411446 CACAGTGGGAGTAATTTCAGCA 58.589 45.455 0.00 0.00 0.00 4.41
537 541 2.749621 CCACAGTGGGAGTAATTTCAGC 59.250 50.000 12.40 0.00 32.67 4.26
538 542 2.749621 GCCACAGTGGGAGTAATTTCAG 59.250 50.000 21.77 0.00 38.19 3.02
539 543 2.375174 AGCCACAGTGGGAGTAATTTCA 59.625 45.455 21.77 0.00 38.19 2.69
540 544 3.073274 AGCCACAGTGGGAGTAATTTC 57.927 47.619 21.77 0.78 38.19 2.17
541 545 3.587506 ACTAGCCACAGTGGGAGTAATTT 59.412 43.478 21.77 0.00 38.19 1.82
542 546 3.182152 ACTAGCCACAGTGGGAGTAATT 58.818 45.455 21.77 0.00 38.19 1.40
543 547 2.766828 GACTAGCCACAGTGGGAGTAAT 59.233 50.000 21.77 0.00 38.19 1.89
544 548 2.176889 GACTAGCCACAGTGGGAGTAA 58.823 52.381 21.77 0.00 38.19 2.24
545 549 1.358103 AGACTAGCCACAGTGGGAGTA 59.642 52.381 21.77 0.00 38.19 2.59
546 550 0.115349 AGACTAGCCACAGTGGGAGT 59.885 55.000 21.77 2.87 38.19 3.85
547 551 1.270907 AAGACTAGCCACAGTGGGAG 58.729 55.000 21.77 0.00 38.19 4.30
548 552 2.176889 GTAAGACTAGCCACAGTGGGA 58.823 52.381 21.77 0.00 38.19 4.37
549 553 1.899814 TGTAAGACTAGCCACAGTGGG 59.100 52.381 21.77 7.25 38.19 4.61
550 554 3.525537 CATGTAAGACTAGCCACAGTGG 58.474 50.000 16.16 16.16 41.55 4.00
551 555 3.195610 TCCATGTAAGACTAGCCACAGTG 59.804 47.826 0.00 0.00 0.00 3.66
552 556 3.195825 GTCCATGTAAGACTAGCCACAGT 59.804 47.826 0.00 0.00 0.00 3.55
553 557 3.430929 GGTCCATGTAAGACTAGCCACAG 60.431 52.174 0.00 0.00 34.56 3.66
554 558 2.500098 GGTCCATGTAAGACTAGCCACA 59.500 50.000 0.00 0.00 34.56 4.17
555 559 2.481449 CGGTCCATGTAAGACTAGCCAC 60.481 54.545 0.00 0.00 34.56 5.01
556 560 1.754803 CGGTCCATGTAAGACTAGCCA 59.245 52.381 0.00 0.00 34.56 4.75
557 561 2.029623 TCGGTCCATGTAAGACTAGCC 58.970 52.381 0.00 0.00 34.56 3.93
558 562 3.795623 TTCGGTCCATGTAAGACTAGC 57.204 47.619 0.00 0.00 34.56 3.42
559 563 6.816640 TCAAAATTCGGTCCATGTAAGACTAG 59.183 38.462 0.00 0.00 34.56 2.57
560 564 6.703319 TCAAAATTCGGTCCATGTAAGACTA 58.297 36.000 0.00 0.00 34.56 2.59
561 565 5.556915 TCAAAATTCGGTCCATGTAAGACT 58.443 37.500 0.00 0.00 34.56 3.24
562 566 5.873179 TCAAAATTCGGTCCATGTAAGAC 57.127 39.130 0.00 0.00 0.00 3.01
563 567 7.461182 AAATCAAAATTCGGTCCATGTAAGA 57.539 32.000 0.00 0.00 0.00 2.10
564 568 9.632807 TTTAAATCAAAATTCGGTCCATGTAAG 57.367 29.630 0.00 0.00 0.00 2.34
565 569 9.632807 CTTTAAATCAAAATTCGGTCCATGTAA 57.367 29.630 0.00 0.00 0.00 2.41
566 570 8.798402 ACTTTAAATCAAAATTCGGTCCATGTA 58.202 29.630 0.00 0.00 0.00 2.29
567 571 7.666623 ACTTTAAATCAAAATTCGGTCCATGT 58.333 30.769 0.00 0.00 0.00 3.21
568 572 8.532977 AACTTTAAATCAAAATTCGGTCCATG 57.467 30.769 0.00 0.00 0.00 3.66
569 573 8.987890 CAAACTTTAAATCAAAATTCGGTCCAT 58.012 29.630 0.00 0.00 0.00 3.41
570 574 7.982354 ACAAACTTTAAATCAAAATTCGGTCCA 59.018 29.630 0.00 0.00 0.00 4.02
574 578 7.582319 GCACACAAACTTTAAATCAAAATTCGG 59.418 33.333 0.00 0.00 0.00 4.30
592 596 1.832883 AGACACACAAGGCACACAAA 58.167 45.000 0.00 0.00 0.00 2.83
863 887 6.407074 CCATCCGGGGCTAGTTAATATAGAAG 60.407 46.154 0.00 0.00 0.00 2.85
887 911 3.430098 CCATGCCTCGCTCTTATCTATCC 60.430 52.174 0.00 0.00 0.00 2.59
1121 1145 3.371898 TGCAGTGATAATCGCAGAGTTTG 59.628 43.478 0.00 0.00 43.63 2.93
1122 1146 3.599343 TGCAGTGATAATCGCAGAGTTT 58.401 40.909 0.00 0.00 43.63 2.66
1123 1147 3.251479 TGCAGTGATAATCGCAGAGTT 57.749 42.857 0.00 0.00 43.63 3.01
1125 1149 3.387397 TCATGCAGTGATAATCGCAGAG 58.613 45.455 0.00 0.00 43.63 3.35
1128 1152 3.469739 ACATCATGCAGTGATAATCGCA 58.530 40.909 10.14 0.00 45.76 5.10
1129 1153 4.478843 AACATCATGCAGTGATAATCGC 57.521 40.909 10.14 0.00 45.76 4.58
1130 1154 6.051646 TCAAACATCATGCAGTGATAATCG 57.948 37.500 10.14 3.36 45.76 3.34
1132 1156 7.200455 CACATCAAACATCATGCAGTGATAAT 58.800 34.615 10.14 2.08 45.76 1.28
1133 1157 6.557110 CACATCAAACATCATGCAGTGATAA 58.443 36.000 10.14 0.00 45.76 1.75
1134 1158 5.449451 GCACATCAAACATCATGCAGTGATA 60.449 40.000 10.14 0.00 45.76 2.15
1136 1160 3.366577 GCACATCAAACATCATGCAGTGA 60.367 43.478 0.00 0.00 42.06 3.41
1137 1161 2.921121 GCACATCAAACATCATGCAGTG 59.079 45.455 0.00 0.00 33.27 3.66
1138 1162 2.823747 AGCACATCAAACATCATGCAGT 59.176 40.909 0.00 0.00 35.51 4.40
1139 1163 3.128764 AGAGCACATCAAACATCATGCAG 59.871 43.478 0.00 0.00 35.51 4.41
1142 1166 3.442625 ACCAGAGCACATCAAACATCATG 59.557 43.478 0.00 0.00 0.00 3.07
1143 1167 3.693807 ACCAGAGCACATCAAACATCAT 58.306 40.909 0.00 0.00 0.00 2.45
1153 1177 1.531423 CTGCAAGAACCAGAGCACAT 58.469 50.000 0.00 0.00 34.07 3.21
1173 1198 4.785453 GGTTCCCCAGAGCCGCAG 62.785 72.222 0.00 0.00 33.27 5.18
1183 1208 0.042881 AGGAGGTGTAGAGGTTCCCC 59.957 60.000 0.00 0.00 0.00 4.81
1392 1446 0.324943 AGACGCTACCATGCCAAACT 59.675 50.000 0.00 0.00 0.00 2.66
1404 1458 2.489938 ATTTTCCCTGCAAGACGCTA 57.510 45.000 0.00 0.00 43.06 4.26
1474 1529 2.032030 AGCGCATATGGTAAATGTTCGC 60.032 45.455 11.47 7.58 36.62 4.70
1517 1572 4.464947 AGGAGAACTTTTTGTCCCAGAAG 58.535 43.478 0.00 0.00 44.79 2.85
1791 1860 7.336931 CAGGGTATAACAGTGCTGATTAACTTT 59.663 37.037 6.17 0.00 0.00 2.66
1808 1877 2.557869 AGGTGTGGAAGCAGGGTATAA 58.442 47.619 0.00 0.00 0.00 0.98
1825 1894 3.897505 AGAAAGGTTGCTGCAAAATAGGT 59.102 39.130 17.80 0.45 0.00 3.08
2117 2186 5.410746 CCTGCATCATCGCTATGAGTAAAAT 59.589 40.000 7.05 0.00 45.17 1.82
2409 2479 1.753073 GCAAGCTCATAGCACCCAAAT 59.247 47.619 1.22 0.00 45.56 2.32
2427 2497 7.175467 CCCTATGCTTATTTAGTGAATGATGCA 59.825 37.037 0.00 0.00 35.07 3.96
2428 2498 7.362401 CCCCTATGCTTATTTAGTGAATGATGC 60.362 40.741 0.00 0.00 0.00 3.91
2472 2542 7.081349 ACGAAGAAAGAGAATGATATAGCTCG 58.919 38.462 0.00 0.00 32.80 5.03
2499 2569 5.603170 ATTCATCTTCGGCATCCAAAAAT 57.397 34.783 0.00 0.00 0.00 1.82
2537 2608 1.333308 TCAACGCACATTTCACAGGTG 59.667 47.619 0.00 0.00 35.68 4.00
2579 2650 0.391661 CAGTTATGCAGTGACCCGCT 60.392 55.000 0.00 0.00 0.00 5.52
2624 2695 7.783090 AGCATAAGATGAAGTCATGTAACAG 57.217 36.000 0.00 0.00 36.57 3.16
2659 2730 8.360390 AGTTGTTGAAAGATAAATCCCTGAAAC 58.640 33.333 0.00 0.00 0.00 2.78
2693 2764 7.888250 AGAGACAAAAGAAACTGGAAGATTT 57.112 32.000 0.00 0.00 37.43 2.17
2745 2816 7.786030 AGAAGATCGAGTTGAAGATTATTGGA 58.214 34.615 0.00 0.00 0.00 3.53
2746 2817 8.071122 GAGAAGATCGAGTTGAAGATTATTGG 57.929 38.462 0.00 0.00 0.00 3.16
2844 2915 5.823209 TGACTGTGCCTGATAATTGATTG 57.177 39.130 0.00 0.00 0.00 2.67
2851 2922 3.264193 AGGACATTGACTGTGCCTGATAA 59.736 43.478 0.00 0.00 46.66 1.75
2856 2927 1.002888 CTGAGGACATTGACTGTGCCT 59.997 52.381 0.00 0.00 46.66 4.75
2952 3023 6.073276 GGCATAATTATTGTACGCATGAGACA 60.073 38.462 2.50 0.53 0.00 3.41
2953 3024 6.147821 AGGCATAATTATTGTACGCATGAGAC 59.852 38.462 2.50 0.00 0.00 3.36
2957 3028 9.457110 TTTAAAGGCATAATTATTGTACGCATG 57.543 29.630 0.00 0.00 0.00 4.06
2973 3044 9.586435 GTTTGCTATATTTCTGTTTAAAGGCAT 57.414 29.630 0.00 0.00 0.00 4.40
2974 3045 8.580720 TGTTTGCTATATTTCTGTTTAAAGGCA 58.419 29.630 0.00 0.00 0.00 4.75
3025 3096 1.480137 CTGGAATCGAGCTGAGTTCCT 59.520 52.381 16.96 0.00 40.55 3.36
3200 3282 0.820871 GAGCAACCGGACTCTGAGAT 59.179 55.000 9.46 0.00 0.00 2.75
3224 3306 1.136147 CGGTACTTGAGGACGGTCG 59.864 63.158 1.43 0.00 0.00 4.79
3275 3357 0.454600 TGTCACCTTCGTCGATAGGC 59.545 55.000 17.88 7.53 34.79 3.93
3320 3402 1.202879 CCAACAGCCAACCCTACAAGA 60.203 52.381 0.00 0.00 0.00 3.02
3341 3423 0.034380 ATGAAGCAGCAGCCACTGAT 60.034 50.000 7.73 0.00 43.56 2.90
3362 3444 0.796312 ACACCAGCGCGAAAAGTATG 59.204 50.000 12.10 0.00 0.00 2.39
3494 3576 7.591006 TCAAATGGTAACGAGAAACTATCAC 57.409 36.000 0.00 0.00 42.51 3.06
3557 3639 8.925338 CAGTTTACCTCATACCTATTCCTAGTT 58.075 37.037 0.00 0.00 0.00 2.24
3558 3640 8.287350 TCAGTTTACCTCATACCTATTCCTAGT 58.713 37.037 0.00 0.00 0.00 2.57
3559 3641 8.707796 TCAGTTTACCTCATACCTATTCCTAG 57.292 38.462 0.00 0.00 0.00 3.02
3560 3642 9.670442 ATTCAGTTTACCTCATACCTATTCCTA 57.330 33.333 0.00 0.00 0.00 2.94
3571 3653 9.965902 ACAGATTCTTTATTCAGTTTACCTCAT 57.034 29.630 0.00 0.00 0.00 2.90
3587 3669 9.463443 CGAAAACAGGAAAATAACAGATTCTTT 57.537 29.630 0.00 0.00 0.00 2.52
3589 3671 8.391075 TCGAAAACAGGAAAATAACAGATTCT 57.609 30.769 0.00 0.00 0.00 2.40
3590 3672 8.504005 TCTCGAAAACAGGAAAATAACAGATTC 58.496 33.333 0.00 0.00 0.00 2.52
3591 3673 8.391075 TCTCGAAAACAGGAAAATAACAGATT 57.609 30.769 0.00 0.00 0.00 2.40
3592 3674 7.979444 TCTCGAAAACAGGAAAATAACAGAT 57.021 32.000 0.00 0.00 0.00 2.90
3594 3676 7.584987 ACATCTCGAAAACAGGAAAATAACAG 58.415 34.615 0.00 0.00 0.00 3.16
3595 3677 7.504924 ACATCTCGAAAACAGGAAAATAACA 57.495 32.000 0.00 0.00 0.00 2.41
3596 3678 9.887406 TTTACATCTCGAAAACAGGAAAATAAC 57.113 29.630 0.00 0.00 0.00 1.89
3678 3764 8.106247 TGAATTACCAACCAGACAGAATTTAC 57.894 34.615 0.00 0.00 0.00 2.01
3747 3833 5.385198 AGTCTTGATGGGTGTTGTTGTTAT 58.615 37.500 0.00 0.00 0.00 1.89
3759 3845 1.135915 CGACAGGAGAGTCTTGATGGG 59.864 57.143 0.00 0.00 36.38 4.00
4136 4259 9.519191 TCAAGAAAATGATCCTCTTCATACAAA 57.481 29.630 0.00 0.00 35.29 2.83
4220 4343 1.659622 TTTGGCCATGATCAGCGCAG 61.660 55.000 6.09 0.00 0.00 5.18
4259 4382 3.342377 TGCAGTGTTCCATTTCCGATA 57.658 42.857 0.00 0.00 0.00 2.92
4277 4400 4.452114 TCGGAATAGTGCAACATATCATGC 59.548 41.667 0.00 2.89 41.43 4.06
4283 4406 4.511454 GCTTCATCGGAATAGTGCAACATA 59.489 41.667 0.00 0.00 33.08 2.29
4294 4417 1.134699 TCTTGCTCGCTTCATCGGAAT 60.135 47.619 0.00 0.00 31.34 3.01
4295 4418 0.246360 TCTTGCTCGCTTCATCGGAA 59.754 50.000 0.00 0.00 0.00 4.30
4298 4421 0.371645 GGTTCTTGCTCGCTTCATCG 59.628 55.000 0.00 0.00 0.00 3.84
4304 4427 2.350522 CATGTAAGGTTCTTGCTCGCT 58.649 47.619 0.00 0.00 0.00 4.93
4309 4432 2.414161 GCGTTCCATGTAAGGTTCTTGC 60.414 50.000 0.00 0.00 0.00 4.01
4315 4438 1.078708 CGGGCGTTCCATGTAAGGT 60.079 57.895 0.00 0.00 34.36 3.50
4334 4457 1.081108 GCCTAGCGCTATCCTCACG 60.081 63.158 19.19 3.98 0.00 4.35
4427 4551 6.036083 AGCAGTACACTGTTATATTTCGCTTG 59.964 38.462 10.87 0.00 45.45 4.01
4435 4559 8.319146 ACAAAGGTTAGCAGTACACTGTTATAT 58.681 33.333 10.87 0.00 45.45 0.86
4655 4781 9.313118 AGTCCAACTAACAATGAAAAACATTTC 57.687 29.630 0.00 0.00 45.60 2.17
4694 4820 6.092807 TGAAACCTGGCAAAACATAACAAAAC 59.907 34.615 0.00 0.00 0.00 2.43
4777 4903 7.388776 ACTGTACACGTCACTCTTTACAGTATA 59.611 37.037 9.82 0.00 44.84 1.47
4920 5046 6.017770 CACAATGGTTCAAATTGCAACAAGAT 60.018 34.615 0.00 0.00 38.36 2.40
5134 5260 0.039798 GTTGATGGCCATATGCAGCG 60.040 55.000 20.84 0.00 43.89 5.18
5185 5311 3.877559 TGATCAGGTTGCTAGTGAATGG 58.122 45.455 0.00 0.00 0.00 3.16
5199 5325 1.561076 TGACAGGGGTGAATGATCAGG 59.439 52.381 0.09 0.00 35.88 3.86
5307 5433 9.928236 GCAGACAGAAAATTTATGATCTTACTC 57.072 33.333 7.39 0.00 0.00 2.59
5308 5434 8.897752 GGCAGACAGAAAATTTATGATCTTACT 58.102 33.333 7.39 0.84 0.00 2.24
5424 5550 3.066190 TCGTCTCCCGATTGCCGT 61.066 61.111 0.00 0.00 41.60 5.68
5581 5710 9.753674 TGAAATACCAGAAAGAAAATGGAGTAT 57.246 29.630 0.00 0.00 37.54 2.12
5595 5724 4.836825 CTGAAGCTCCTGAAATACCAGAA 58.163 43.478 0.00 0.00 36.29 3.02
5644 5773 1.021202 CAAGCCGTTCACAAACCTCA 58.979 50.000 0.00 0.00 31.27 3.86
5647 5776 3.998341 TCTATACAAGCCGTTCACAAACC 59.002 43.478 0.00 0.00 31.27 3.27
5648 5777 5.796350 ATCTATACAAGCCGTTCACAAAC 57.204 39.130 0.00 0.00 0.00 2.93
5751 5885 1.442857 CGTCTGACAGAGGCGTGAC 60.443 63.158 11.93 0.00 45.17 3.67
5778 5912 3.218470 GCACTGGCAAGGCACACA 61.218 61.111 5.28 0.00 40.72 3.72
5795 5929 0.807667 CGAATCAGTGAGGCTTCCCG 60.808 60.000 0.00 0.00 35.76 5.14
5854 5988 6.956694 CGCAATTCGTTTGAAAAGAAGATAC 58.043 36.000 11.55 1.91 37.71 2.24
5871 6008 1.720852 GTTTGACATGGCACGCAATTC 59.279 47.619 0.00 0.00 0.00 2.17
6009 6148 6.373216 CCGGTTTCAAAAACTATGGTATCAGA 59.627 38.462 0.00 0.00 0.00 3.27
6020 6161 1.026584 CCGGTCCGGTTTCAAAAACT 58.973 50.000 23.02 0.00 42.73 2.66
6043 6184 1.420138 TGAAGGTCAAGGGTTCAGTCC 59.580 52.381 0.00 0.00 0.00 3.85
6044 6185 2.772287 CTGAAGGTCAAGGGTTCAGTC 58.228 52.381 3.62 0.00 41.47 3.51
6045 6186 1.202818 GCTGAAGGTCAAGGGTTCAGT 60.203 52.381 11.75 0.00 45.97 3.41
6046 6187 1.528129 GCTGAAGGTCAAGGGTTCAG 58.472 55.000 6.90 6.90 46.66 3.02
6047 6188 0.110486 GGCTGAAGGTCAAGGGTTCA 59.890 55.000 0.00 0.00 0.00 3.18
6048 6189 0.609406 GGGCTGAAGGTCAAGGGTTC 60.609 60.000 0.00 0.00 0.00 3.62
6062 6203 0.174845 CCTTCAACATGCATGGGCTG 59.825 55.000 29.41 21.74 41.91 4.85
6069 6210 3.509575 GGTTATTGGTCCTTCAACATGCA 59.490 43.478 0.00 0.00 0.00 3.96
6073 6214 4.798882 AGTTGGTTATTGGTCCTTCAACA 58.201 39.130 0.00 0.00 36.47 3.33
6075 6216 5.566469 CCTAGTTGGTTATTGGTCCTTCAA 58.434 41.667 0.00 0.00 0.00 2.69
6080 6221 2.025699 TGGCCTAGTTGGTTATTGGTCC 60.026 50.000 3.32 0.00 38.35 4.46
6125 6282 7.938715 AGAACGTATAATCTTCGATGTAACCT 58.061 34.615 0.00 0.00 0.00 3.50
6127 6284 8.778141 TGAGAACGTATAATCTTCGATGTAAC 57.222 34.615 0.00 0.00 0.00 2.50
6131 6288 8.968242 TCAAATGAGAACGTATAATCTTCGATG 58.032 33.333 0.00 0.00 0.00 3.84
6147 6304 7.722949 AAATTGGCCTCTAATCAAATGAGAA 57.277 32.000 3.32 0.00 0.00 2.87
6206 6363 2.993220 CGGTTCATCAGTTCATTCGTGA 59.007 45.455 0.00 0.00 0.00 4.35
6208 6365 2.346803 CCGGTTCATCAGTTCATTCGT 58.653 47.619 0.00 0.00 0.00 3.85
6234 6391 3.278668 TGTTTAGGTTTTCACGGGTCA 57.721 42.857 0.00 0.00 0.00 4.02
6235 6392 3.878699 TCTTGTTTAGGTTTTCACGGGTC 59.121 43.478 0.00 0.00 0.00 4.46
6239 6396 8.339714 TCTTGTAATCTTGTTTAGGTTTTCACG 58.660 33.333 0.00 0.00 0.00 4.35
6247 6404 6.655003 TGAGGCTTCTTGTAATCTTGTTTAGG 59.345 38.462 0.00 0.00 0.00 2.69
6248 6405 7.389053 AGTGAGGCTTCTTGTAATCTTGTTTAG 59.611 37.037 0.00 0.00 0.00 1.85
6252 6409 4.999950 CAGTGAGGCTTCTTGTAATCTTGT 59.000 41.667 0.00 0.00 0.00 3.16
6253 6410 4.394300 CCAGTGAGGCTTCTTGTAATCTTG 59.606 45.833 0.00 0.00 0.00 3.02
6254 6411 4.042187 ACCAGTGAGGCTTCTTGTAATCTT 59.958 41.667 0.00 0.00 43.14 2.40
6255 6412 3.584848 ACCAGTGAGGCTTCTTGTAATCT 59.415 43.478 0.00 0.00 43.14 2.40
6256 6413 3.944087 ACCAGTGAGGCTTCTTGTAATC 58.056 45.455 0.00 0.00 43.14 1.75
6257 6414 4.327680 GAACCAGTGAGGCTTCTTGTAAT 58.672 43.478 0.00 0.00 43.14 1.89
6258 6415 3.740115 GAACCAGTGAGGCTTCTTGTAA 58.260 45.455 0.00 0.00 43.14 2.41
6259 6416 2.288825 CGAACCAGTGAGGCTTCTTGTA 60.289 50.000 0.00 0.00 43.14 2.41
6273 6430 5.180492 TGCATAGTTTAGAAAACCGAACCAG 59.820 40.000 0.00 0.00 0.00 4.00
6274 6431 5.064558 TGCATAGTTTAGAAAACCGAACCA 58.935 37.500 0.00 0.00 0.00 3.67
6277 6434 6.876789 TCTCATGCATAGTTTAGAAAACCGAA 59.123 34.615 0.00 0.00 0.00 4.30
6290 6447 0.105593 CGGCTGGTCTCATGCATAGT 59.894 55.000 0.00 0.00 0.00 2.12
6301 6458 1.576356 CAAATAGAGAGCGGCTGGTC 58.424 55.000 17.10 17.10 42.99 4.02
6305 6462 2.113860 TTTGCAAATAGAGAGCGGCT 57.886 45.000 8.05 0.00 0.00 5.52
6306 6463 2.919666 TTTTGCAAATAGAGAGCGGC 57.080 45.000 13.65 0.00 0.00 6.53
6327 6484 7.381139 CGCAGTGGAACAATTTGTTTATACTTT 59.619 33.333 15.54 0.00 44.16 2.66
6328 6485 6.861055 CGCAGTGGAACAATTTGTTTATACTT 59.139 34.615 15.54 0.00 44.16 2.24
6329 6486 6.016610 ACGCAGTGGAACAATTTGTTTATACT 60.017 34.615 15.54 15.42 44.16 2.12
6330 6487 6.146898 ACGCAGTGGAACAATTTGTTTATAC 58.853 36.000 15.54 13.78 44.16 1.47
6331 6488 6.320494 ACGCAGTGGAACAATTTGTTTATA 57.680 33.333 15.54 3.64 44.16 0.98
6332 6489 5.195001 ACGCAGTGGAACAATTTGTTTAT 57.805 34.783 15.54 0.00 44.16 1.40
6333 6490 4.640789 ACGCAGTGGAACAATTTGTTTA 57.359 36.364 15.54 6.22 44.16 2.01
6357 6514 5.982465 AAAATGATTTGGTTTGTGTTCCG 57.018 34.783 0.00 0.00 0.00 4.30
6358 6515 7.313951 TGAAAAATGATTTGGTTTGTGTTCC 57.686 32.000 0.00 0.00 0.00 3.62
6360 6517 9.786105 GAAATGAAAAATGATTTGGTTTGTGTT 57.214 25.926 0.00 0.00 0.00 3.32
6378 6539 4.217334 TGGAGCGCAACATTAGAAATGAAA 59.783 37.500 11.47 0.00 0.00 2.69
6396 6557 6.145556 TCGAAAGAGGACCAATATTTGGAGC 61.146 44.000 13.03 4.68 44.40 4.70
6397 6558 5.428253 TCGAAAGAGGACCAATATTTGGAG 58.572 41.667 13.03 0.00 44.40 3.86
6427 6588 4.497473 ACACATTCAAAACATACCGGTG 57.503 40.909 19.93 3.36 0.00 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.