Multiple sequence alignment - TraesCS7D01G383400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G383400 chr7D 100.000 9117 0 0 1 9117 497278898 497269782 0.000000e+00 16837.0
1 TraesCS7D01G383400 chr7D 98.039 510 10 0 1 510 497305675 497305166 0.000000e+00 887.0
2 TraesCS7D01G383400 chr7D 82.051 234 37 4 513 744 512129039 512128809 2.600000e-45 195.0
3 TraesCS7D01G383400 chr7B 95.782 5524 161 25 741 6219 525135663 525130167 0.000000e+00 8844.0
4 TraesCS7D01G383400 chr7B 90.402 1094 52 18 7707 8781 525128929 525127870 0.000000e+00 1389.0
5 TraesCS7D01G383400 chr7B 94.290 683 27 6 6220 6901 525130104 525129433 0.000000e+00 1035.0
6 TraesCS7D01G383400 chr7B 90.802 511 30 9 7149 7651 525129428 525128927 0.000000e+00 667.0
7 TraesCS7D01G383400 chr7B 85.455 165 12 5 8780 8932 525125196 525125032 2.630000e-35 161.0
8 TraesCS7D01G383400 chr7A 95.888 4450 128 17 1807 6219 562900802 562896371 0.000000e+00 7153.0
9 TraesCS7D01G383400 chr7A 93.373 1690 74 18 7156 8821 562895362 562893687 0.000000e+00 2466.0
10 TraesCS7D01G383400 chr7A 94.601 1241 49 12 579 1811 562902429 562901199 0.000000e+00 1905.0
11 TraesCS7D01G383400 chr7A 96.104 462 11 3 6220 6675 562896309 562895849 0.000000e+00 747.0
12 TraesCS7D01G383400 chr7A 97.004 267 7 1 6664 6930 562895620 562895355 1.810000e-121 448.0
13 TraesCS7D01G383400 chr7A 95.714 70 3 0 8836 8905 562893240 562893171 7.480000e-21 113.0
14 TraesCS7D01G383400 chr7A 89.062 64 6 1 7660 7722 485190735 485190798 2.730000e-10 78.7
15 TraesCS7D01G383400 chrUn 96.282 511 19 0 1 511 88599552 88599042 0.000000e+00 839.0
16 TraesCS7D01G383400 chr5D 96.282 511 17 2 1 510 382984183 382983674 0.000000e+00 837.0
17 TraesCS7D01G383400 chr5D 85.714 189 23 3 554 741 58518141 58518326 7.220000e-46 196.0
18 TraesCS7D01G383400 chr5D 82.203 236 35 5 511 744 135236009 135235779 7.220000e-46 196.0
19 TraesCS7D01G383400 chr2D 96.275 510 19 0 1 510 520698168 520698677 0.000000e+00 837.0
20 TraesCS7D01G383400 chr2D 96.094 512 17 3 1 510 248550395 248550905 0.000000e+00 832.0
21 TraesCS7D01G383400 chr2D 88.827 179 16 3 566 743 286667848 286667673 5.540000e-52 217.0
22 TraesCS7D01G383400 chr2D 84.120 233 28 8 511 741 622490035 622489810 5.540000e-52 217.0
23 TraesCS7D01G383400 chr4D 96.086 511 18 2 1 510 130748356 130748865 0.000000e+00 832.0
24 TraesCS7D01G383400 chr4B 96.086 511 18 2 2 511 534313799 534314308 0.000000e+00 832.0
25 TraesCS7D01G383400 chr4B 81.974 233 36 5 511 741 472866840 472867068 9.340000e-45 193.0
26 TraesCS7D01G383400 chr4B 93.443 61 4 0 7648 7708 43064238 43064298 3.510000e-14 91.6
27 TraesCS7D01G383400 chr4B 90.769 65 2 4 7646 7708 479678626 479678688 5.870000e-12 84.2
28 TraesCS7D01G383400 chr4A 96.094 512 16 4 1 510 591908282 591908791 0.000000e+00 832.0
29 TraesCS7D01G383400 chr4A 95.736 516 18 4 1 514 591915714 591916227 0.000000e+00 828.0
30 TraesCS7D01G383400 chr5A 82.906 234 32 7 511 741 2361468 2361696 4.320000e-48 204.0
31 TraesCS7D01G383400 chr5A 87.324 71 4 4 7659 7725 593472277 593472208 9.820000e-10 76.8
32 TraesCS7D01G383400 chr6B 83.568 213 30 4 531 741 503605075 503604866 2.600000e-45 195.0
33 TraesCS7D01G383400 chr3D 82.174 230 36 4 514 743 462807555 462807779 9.340000e-45 193.0
34 TraesCS7D01G383400 chr2A 93.846 65 3 1 7646 7709 27422804 27422740 7.530000e-16 97.1
35 TraesCS7D01G383400 chr2B 91.304 69 6 0 7647 7715 546587802 546587734 2.710000e-15 95.3
36 TraesCS7D01G383400 chr1B 94.737 57 2 1 7658 7713 117471049 117470993 4.530000e-13 87.9
37 TraesCS7D01G383400 chr1A 92.982 57 3 1 7658 7713 74014472 74014416 2.110000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G383400 chr7D 497269782 497278898 9116 True 16837.000000 16837 100.000000 1 9117 1 chr7D.!!$R1 9116
1 TraesCS7D01G383400 chr7D 497305166 497305675 509 True 887.000000 887 98.039000 1 510 1 chr7D.!!$R2 509
2 TraesCS7D01G383400 chr7B 525125032 525135663 10631 True 2419.200000 8844 91.346200 741 8932 5 chr7B.!!$R1 8191
3 TraesCS7D01G383400 chr7A 562893171 562902429 9258 True 2138.666667 7153 95.447333 579 8905 6 chr7A.!!$R1 8326
4 TraesCS7D01G383400 chrUn 88599042 88599552 510 True 839.000000 839 96.282000 1 511 1 chrUn.!!$R1 510
5 TraesCS7D01G383400 chr5D 382983674 382984183 509 True 837.000000 837 96.282000 1 510 1 chr5D.!!$R2 509
6 TraesCS7D01G383400 chr2D 520698168 520698677 509 False 837.000000 837 96.275000 1 510 1 chr2D.!!$F2 509
7 TraesCS7D01G383400 chr2D 248550395 248550905 510 False 832.000000 832 96.094000 1 510 1 chr2D.!!$F1 509
8 TraesCS7D01G383400 chr4D 130748356 130748865 509 False 832.000000 832 96.086000 1 510 1 chr4D.!!$F1 509
9 TraesCS7D01G383400 chr4B 534313799 534314308 509 False 832.000000 832 96.086000 2 511 1 chr4B.!!$F4 509
10 TraesCS7D01G383400 chr4A 591908282 591908791 509 False 832.000000 832 96.094000 1 510 1 chr4A.!!$F1 509
11 TraesCS7D01G383400 chr4A 591915714 591916227 513 False 828.000000 828 95.736000 1 514 1 chr4A.!!$F2 513

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
713 715 0.238817 GCCTAGACGTATGAGGCGAG 59.761 60.000 16.49 0.0 45.94 5.03 F
1627 1637 1.130561 GCGTGTTAATTGGACTGGAGC 59.869 52.381 0.00 0.0 0.00 4.70 F
3253 3669 0.109342 AAGGAGACTGGCACTTGGTG 59.891 55.000 0.00 0.0 42.68 4.17 F
3902 4325 2.808543 GGTCACCACTGCTAACTTTCTG 59.191 50.000 0.00 0.0 0.00 3.02 F
5303 5754 1.156736 GCGTTAGCATGTTGGAGTGT 58.843 50.000 0.00 0.0 44.35 3.55 F
7006 7770 0.040425 ACCGTTTGATTCGCAACAGC 60.040 50.000 0.00 0.0 35.91 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1689 1699 0.038343 ACCGCACCAATGTCAAATGC 60.038 50.000 0.0 0.0 0.0 3.56 R
3276 3697 0.540597 ACTGGGAAAGAAGCAAGGCC 60.541 55.000 0.0 0.0 0.0 5.19 R
5010 5460 2.209690 TCCCCGAAATGGAAAGAACC 57.790 50.000 0.0 0.0 42.0 3.62 R
5812 6263 1.296392 CCAGGCCGTGTTCTCATCA 59.704 57.895 0.0 0.0 0.0 3.07 R
7054 7818 0.037975 CAGCCACATCAGCCAAAACC 60.038 55.000 0.0 0.0 0.0 3.27 R
8834 12650 0.108615 CCACTAGACCAACTCGCCTG 60.109 60.000 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
99 100 1.898574 CACGGTTGCTTTGCTCCCT 60.899 57.895 0.00 0.00 0.00 4.20
514 516 4.873129 CGAGGGCGTCACATCGGG 62.873 72.222 8.06 0.00 0.00 5.14
515 517 3.771160 GAGGGCGTCACATCGGGT 61.771 66.667 1.64 0.00 0.00 5.28
576 578 3.941188 CGACCAGGCGCCCCATAT 61.941 66.667 26.15 4.02 0.00 1.78
577 579 2.032681 GACCAGGCGCCCCATATC 59.967 66.667 26.15 10.54 0.00 1.63
603 605 3.011595 TCCATATTTGGGCTGGATATGGG 59.988 47.826 21.81 11.40 46.63 4.00
604 606 3.368248 CATATTTGGGCTGGATATGGGG 58.632 50.000 0.00 0.00 32.63 4.96
628 630 2.281276 GGTCAGCCCGGACGTTTT 60.281 61.111 0.73 0.00 38.70 2.43
629 631 1.895231 GGTCAGCCCGGACGTTTTT 60.895 57.895 0.73 0.00 38.70 1.94
665 667 2.164338 GGGGCGTCTTGGTCATAAAAA 58.836 47.619 0.00 0.00 0.00 1.94
711 713 4.946411 GCCTAGACGTATGAGGCG 57.054 61.111 16.49 0.00 45.94 5.52
712 714 2.328235 GCCTAGACGTATGAGGCGA 58.672 57.895 16.49 0.00 45.94 5.54
713 715 0.238817 GCCTAGACGTATGAGGCGAG 59.761 60.000 16.49 0.00 45.94 5.03
721 723 1.135083 CGTATGAGGCGAGTTTGAGGT 60.135 52.381 0.00 0.00 0.00 3.85
736 738 1.548719 TGAGGTGTCCGGTTGTAGATG 59.451 52.381 0.00 0.00 0.00 2.90
756 758 2.101415 TGCTCTAACCGAGACATGGATG 59.899 50.000 0.00 0.00 42.62 3.51
829 832 5.319043 TCAAAGGGTGGACTTGAATTAGT 57.681 39.130 0.00 0.00 0.00 2.24
840 843 6.321181 TGGACTTGAATTAGTTGCAGTTTCTT 59.679 34.615 0.00 0.00 0.00 2.52
841 844 7.500892 TGGACTTGAATTAGTTGCAGTTTCTTA 59.499 33.333 0.00 0.00 0.00 2.10
873 876 2.125310 CTACATGGGCCGCAACGA 60.125 61.111 0.00 0.00 0.00 3.85
1502 1512 4.597215 GGGATTACCGCGACCCCG 62.597 72.222 8.23 0.00 36.65 5.73
1589 1599 5.967674 GCTGTTATGTGATCATTAGTGTTGC 59.032 40.000 0.00 0.00 35.70 4.17
1627 1637 1.130561 GCGTGTTAATTGGACTGGAGC 59.869 52.381 0.00 0.00 0.00 4.70
1642 1652 1.146263 GAGCCGGTATGAGTTGGGG 59.854 63.158 1.90 0.00 0.00 4.96
1689 1699 2.662535 TATGCAGGGGTGGATTCATG 57.337 50.000 0.00 0.00 0.00 3.07
1721 1731 2.167693 TGGTGCGGTCTAGTTTGGATAG 59.832 50.000 0.00 0.00 0.00 2.08
1738 1748 8.720562 GTTTGGATAGCTAAAATTTTGCACAAT 58.279 29.630 13.76 9.52 0.00 2.71
1805 1816 4.081807 GCTCCCTTTTCTCTCAAATGCATT 60.082 41.667 5.99 5.99 0.00 3.56
1811 1822 8.090214 CCCTTTTCTCTCAAATGCATTTAAAGA 58.910 33.333 28.31 26.28 0.00 2.52
1812 1823 8.919661 CCTTTTCTCTCAAATGCATTTAAAGAC 58.080 33.333 28.31 0.00 0.00 3.01
1906 2318 2.160219 TCTGACGGTACATGTGTCGTAC 59.840 50.000 22.08 16.91 38.80 3.67
2073 2485 7.716998 ACATACAGGTGACCATCTTATTTCATC 59.283 37.037 3.63 0.00 0.00 2.92
2164 2576 2.424601 TGATGATTAGGCTTGCACTTGC 59.575 45.455 0.00 0.00 42.50 4.01
2175 2587 0.178992 TGCACTTGCTTTGGCTAGGT 60.179 50.000 2.33 0.00 43.60 3.08
2228 2640 2.164422 TCATCGAGTGAAGCTAGTGGTG 59.836 50.000 0.00 0.00 32.78 4.17
2239 2651 1.584724 CTAGTGGTGGGGTCCTCAAT 58.415 55.000 0.00 0.00 0.00 2.57
2331 2743 6.073657 GCTATCTTGAGATGAGCAGATTGTTC 60.074 42.308 3.79 0.00 36.05 3.18
2333 2745 2.897436 TGAGATGAGCAGATTGTTCGG 58.103 47.619 0.00 0.00 29.60 4.30
2464 2876 2.262423 AGCTGGTTGAGAAAGTGGAC 57.738 50.000 0.00 0.00 0.00 4.02
2651 3063 4.872124 TCATGTGAATGAGTTGAAGATCGG 59.128 41.667 0.00 0.00 0.00 4.18
2764 3180 2.044793 ACAGGGGATTGAAGTCTCCA 57.955 50.000 0.00 0.00 41.50 3.86
3253 3669 0.109342 AAGGAGACTGGCACTTGGTG 59.891 55.000 0.00 0.00 42.68 4.17
3276 3697 6.310711 GTGAACTACTCCTTTGAAATAGACGG 59.689 42.308 0.00 0.00 0.00 4.79
3385 3806 6.688922 GCAACTGACAATCCAGATCCCTAATA 60.689 42.308 0.00 0.00 37.59 0.98
3483 3904 5.789643 ACTTGCCACATCTTTGTAACAAT 57.210 34.783 0.00 0.00 33.76 2.71
3570 3992 5.927689 CAGTCATTGTTACCTAACACGGTAA 59.072 40.000 0.00 0.00 45.01 2.85
3798 4220 5.769662 TCAAGGACTCAGTATGCAAACAATT 59.230 36.000 0.00 0.00 34.76 2.32
3900 4323 2.846193 TGGTCACCACTGCTAACTTTC 58.154 47.619 0.00 0.00 0.00 2.62
3902 4325 2.808543 GGTCACCACTGCTAACTTTCTG 59.191 50.000 0.00 0.00 0.00 3.02
3905 4328 3.133901 TCACCACTGCTAACTTTCTGTGA 59.866 43.478 0.00 0.00 35.15 3.58
4067 4490 4.453819 CCTCAACTCCTGATTTGAAGTCAC 59.546 45.833 2.24 0.00 31.11 3.67
4610 5036 9.503369 ACTAGGAAAGGACATAGTAGGTTTTAT 57.497 33.333 0.00 0.00 35.98 1.40
4697 5127 8.653191 TCCTTTATTAGTAGACTTGTTTGGACA 58.347 33.333 0.00 0.00 0.00 4.02
4872 5322 3.333029 TGCAGGAGACGATTCATTGAA 57.667 42.857 0.75 0.75 0.00 2.69
5010 5460 3.657956 TTTTTGCAGGAAAGCCACG 57.342 47.368 0.00 0.00 36.29 4.94
5179 5630 3.381272 CGAATGTTAGGATTGTTGGCCAT 59.619 43.478 6.09 0.00 0.00 4.40
5232 5683 2.112998 CCCTCCATGGTTGCATTTCAT 58.887 47.619 12.58 0.00 0.00 2.57
5302 5753 3.975992 GCGTTAGCATGTTGGAGTG 57.024 52.632 0.00 0.00 44.35 3.51
5303 5754 1.156736 GCGTTAGCATGTTGGAGTGT 58.843 50.000 0.00 0.00 44.35 3.55
5304 5755 1.535462 GCGTTAGCATGTTGGAGTGTT 59.465 47.619 0.00 0.00 44.35 3.32
5305 5756 2.665519 GCGTTAGCATGTTGGAGTGTTG 60.666 50.000 0.00 0.00 44.35 3.33
5346 5797 1.227438 CGTGTTTCCACCTGTCCGT 60.227 57.895 0.00 0.00 38.41 4.69
5669 6120 1.892819 CGAGGATCCCATCATCCCGG 61.893 65.000 8.55 0.00 43.31 5.73
5731 6182 1.612950 GTCAACATTGTGCCATGGACA 59.387 47.619 18.40 14.17 0.00 4.02
5794 6245 2.171448 CCTCATTACTGCCTACCTTGCT 59.829 50.000 0.00 0.00 0.00 3.91
5795 6246 3.201290 CTCATTACTGCCTACCTTGCTG 58.799 50.000 0.00 0.00 0.00 4.41
5812 6263 3.984732 GGCCCAGCCCCAGTCTTT 61.985 66.667 0.00 0.00 44.06 2.52
5813 6264 2.677875 GCCCAGCCCCAGTCTTTG 60.678 66.667 0.00 0.00 0.00 2.77
5835 6287 2.975799 GAACACGGCCTGGCGAAA 60.976 61.111 20.32 0.00 0.00 3.46
5841 6293 2.395360 CGGCCTGGCGAAATTCGAA 61.395 57.895 20.38 0.00 43.74 3.71
5858 6310 2.562298 TCGAAAAAGCCATGGCAGAATT 59.438 40.909 37.18 24.76 44.88 2.17
5910 6362 2.044650 TGGGAATGAGCTGCTGCC 60.045 61.111 7.01 2.76 40.80 4.85
6052 6504 8.232913 ACTAATGTAGTTGTGTTGGAAATGTT 57.767 30.769 0.00 0.00 34.86 2.71
6073 6525 5.073144 TGTTGTCCCCTTCTCTAAAATGTCT 59.927 40.000 0.00 0.00 0.00 3.41
6311 6832 2.035832 CGAAACCATTTTGGAGGCTGTT 59.964 45.455 0.00 0.00 40.96 3.16
6319 6840 0.550914 TTGGAGGCTGTTGAAGTGGT 59.449 50.000 0.00 0.00 0.00 4.16
6334 6855 5.809001 TGAAGTGGTGAATCTGCTAGATTT 58.191 37.500 11.18 0.00 44.41 2.17
6339 6860 6.609212 AGTGGTGAATCTGCTAGATTTCTCTA 59.391 38.462 11.18 3.56 44.41 2.43
6390 6911 7.391275 TCGTAAATACTTTCCTTACCCTTTTGG 59.609 37.037 0.00 0.00 41.37 3.28
6516 7037 1.005037 CCTTGTGCGCTCTGGTACA 60.005 57.895 9.73 0.00 0.00 2.90
6770 7533 6.380995 TCAATCAAAATGAACATTGGACTCG 58.619 36.000 0.69 0.00 0.00 4.18
6814 7578 2.297033 AGAATTGCCAAGCACGTTGAAT 59.703 40.909 0.00 0.00 38.71 2.57
6856 7620 2.159128 TGTACCAGAAACGGTGAAACGA 60.159 45.455 0.00 0.00 40.39 3.85
6921 7685 2.494059 CTTTCACTTCATGTCACCCGT 58.506 47.619 0.00 0.00 0.00 5.28
6922 7686 2.631160 TTCACTTCATGTCACCCGTT 57.369 45.000 0.00 0.00 0.00 4.44
6923 7687 3.755112 TTCACTTCATGTCACCCGTTA 57.245 42.857 0.00 0.00 0.00 3.18
6924 7688 3.034721 TCACTTCATGTCACCCGTTAC 57.965 47.619 0.00 0.00 0.00 2.50
6925 7689 2.631062 TCACTTCATGTCACCCGTTACT 59.369 45.455 0.00 0.00 0.00 2.24
6926 7690 3.827876 TCACTTCATGTCACCCGTTACTA 59.172 43.478 0.00 0.00 0.00 1.82
6927 7691 4.281435 TCACTTCATGTCACCCGTTACTAA 59.719 41.667 0.00 0.00 0.00 2.24
6928 7692 4.387862 CACTTCATGTCACCCGTTACTAAC 59.612 45.833 0.00 0.00 0.00 2.34
6929 7693 4.039488 ACTTCATGTCACCCGTTACTAACA 59.961 41.667 0.00 0.00 0.00 2.41
6930 7694 4.182693 TCATGTCACCCGTTACTAACAG 57.817 45.455 0.00 0.00 0.00 3.16
6931 7695 3.827876 TCATGTCACCCGTTACTAACAGA 59.172 43.478 0.00 0.00 0.00 3.41
6932 7696 4.281435 TCATGTCACCCGTTACTAACAGAA 59.719 41.667 0.00 0.00 0.00 3.02
6933 7697 4.669206 TGTCACCCGTTACTAACAGAAA 57.331 40.909 0.00 0.00 0.00 2.52
6934 7698 5.021033 TGTCACCCGTTACTAACAGAAAA 57.979 39.130 0.00 0.00 0.00 2.29
6935 7699 5.426504 TGTCACCCGTTACTAACAGAAAAA 58.573 37.500 0.00 0.00 0.00 1.94
6936 7700 5.294060 TGTCACCCGTTACTAACAGAAAAAC 59.706 40.000 0.00 0.00 0.00 2.43
6937 7701 5.294060 GTCACCCGTTACTAACAGAAAAACA 59.706 40.000 0.00 0.00 0.00 2.83
6938 7702 5.524646 TCACCCGTTACTAACAGAAAAACAG 59.475 40.000 0.00 0.00 0.00 3.16
6939 7703 5.295045 CACCCGTTACTAACAGAAAAACAGT 59.705 40.000 0.00 0.00 0.00 3.55
6940 7704 5.525012 ACCCGTTACTAACAGAAAAACAGTC 59.475 40.000 0.00 0.00 0.00 3.51
6941 7705 5.756833 CCCGTTACTAACAGAAAAACAGTCT 59.243 40.000 0.00 0.00 0.00 3.24
6942 7706 6.259387 CCCGTTACTAACAGAAAAACAGTCTT 59.741 38.462 0.00 0.00 0.00 3.01
6943 7707 7.123830 CCGTTACTAACAGAAAAACAGTCTTG 58.876 38.462 0.00 0.00 0.00 3.02
6944 7708 7.010738 CCGTTACTAACAGAAAAACAGTCTTGA 59.989 37.037 0.00 0.00 0.00 3.02
6945 7709 8.385111 CGTTACTAACAGAAAAACAGTCTTGAA 58.615 33.333 0.00 0.00 0.00 2.69
6946 7710 9.486857 GTTACTAACAGAAAAACAGTCTTGAAC 57.513 33.333 0.00 0.00 0.00 3.18
6947 7711 7.085052 ACTAACAGAAAAACAGTCTTGAACC 57.915 36.000 0.00 0.00 0.00 3.62
6948 7712 4.983671 ACAGAAAAACAGTCTTGAACCC 57.016 40.909 0.00 0.00 0.00 4.11
6949 7713 4.600062 ACAGAAAAACAGTCTTGAACCCT 58.400 39.130 0.00 0.00 0.00 4.34
6950 7714 4.399303 ACAGAAAAACAGTCTTGAACCCTG 59.601 41.667 0.00 0.00 0.00 4.45
6951 7715 4.640201 CAGAAAAACAGTCTTGAACCCTGA 59.360 41.667 0.00 0.00 0.00 3.86
6952 7716 5.125417 CAGAAAAACAGTCTTGAACCCTGAA 59.875 40.000 0.00 0.00 0.00 3.02
6953 7717 5.714806 AGAAAAACAGTCTTGAACCCTGAAA 59.285 36.000 0.00 0.00 0.00 2.69
6954 7718 6.381133 AGAAAAACAGTCTTGAACCCTGAAAT 59.619 34.615 0.00 0.00 0.00 2.17
6955 7719 6.544928 AAAACAGTCTTGAACCCTGAAATT 57.455 33.333 0.00 0.00 0.00 1.82
6956 7720 6.544928 AAACAGTCTTGAACCCTGAAATTT 57.455 33.333 0.00 0.00 0.00 1.82
6957 7721 7.654022 AAACAGTCTTGAACCCTGAAATTTA 57.346 32.000 0.00 0.00 0.00 1.40
6958 7722 7.839680 AACAGTCTTGAACCCTGAAATTTAT 57.160 32.000 0.00 0.00 0.00 1.40
6959 7723 7.219484 ACAGTCTTGAACCCTGAAATTTATG 57.781 36.000 0.00 0.00 0.00 1.90
6960 7724 7.004086 ACAGTCTTGAACCCTGAAATTTATGA 58.996 34.615 0.00 0.00 0.00 2.15
6961 7725 7.505585 ACAGTCTTGAACCCTGAAATTTATGAA 59.494 33.333 0.00 0.00 0.00 2.57
6962 7726 8.359642 CAGTCTTGAACCCTGAAATTTATGAAA 58.640 33.333 0.00 0.00 0.00 2.69
6963 7727 8.360390 AGTCTTGAACCCTGAAATTTATGAAAC 58.640 33.333 0.00 0.00 0.00 2.78
6964 7728 8.141268 GTCTTGAACCCTGAAATTTATGAAACA 58.859 33.333 0.00 0.00 0.00 2.83
6965 7729 8.869109 TCTTGAACCCTGAAATTTATGAAACAT 58.131 29.630 0.00 0.00 0.00 2.71
6966 7730 9.492973 CTTGAACCCTGAAATTTATGAAACATT 57.507 29.630 0.00 0.00 0.00 2.71
6967 7731 9.487790 TTGAACCCTGAAATTTATGAAACATTC 57.512 29.630 0.00 0.00 0.00 2.67
6968 7732 8.646004 TGAACCCTGAAATTTATGAAACATTCA 58.354 29.630 0.00 0.00 45.01 2.57
6969 7733 8.831715 AACCCTGAAATTTATGAAACATTCAC 57.168 30.769 0.00 0.00 43.48 3.18
6970 7734 8.193953 ACCCTGAAATTTATGAAACATTCACT 57.806 30.769 0.00 0.00 43.48 3.41
6971 7735 8.650490 ACCCTGAAATTTATGAAACATTCACTT 58.350 29.630 0.00 0.00 43.48 3.16
6972 7736 9.492973 CCCTGAAATTTATGAAACATTCACTTT 57.507 29.630 0.00 0.00 43.48 2.66
6989 7753 9.617975 CATTCACTTTTCAATTCTTCTAGAACC 57.382 33.333 0.00 0.00 37.00 3.62
6990 7754 7.421530 TCACTTTTCAATTCTTCTAGAACCG 57.578 36.000 0.00 0.00 37.00 4.44
6991 7755 6.990349 TCACTTTTCAATTCTTCTAGAACCGT 59.010 34.615 0.00 0.00 37.00 4.83
6992 7756 7.497909 TCACTTTTCAATTCTTCTAGAACCGTT 59.502 33.333 0.00 0.00 37.00 4.44
6993 7757 8.129211 CACTTTTCAATTCTTCTAGAACCGTTT 58.871 33.333 0.00 0.00 37.00 3.60
6994 7758 8.129211 ACTTTTCAATTCTTCTAGAACCGTTTG 58.871 33.333 0.00 4.10 37.00 2.93
6995 7759 7.795482 TTTCAATTCTTCTAGAACCGTTTGA 57.205 32.000 0.00 6.25 37.00 2.69
6996 7760 7.979444 TTCAATTCTTCTAGAACCGTTTGAT 57.021 32.000 0.00 0.00 37.00 2.57
6997 7761 7.979444 TCAATTCTTCTAGAACCGTTTGATT 57.021 32.000 0.00 0.00 37.00 2.57
6998 7762 8.029642 TCAATTCTTCTAGAACCGTTTGATTC 57.970 34.615 0.00 0.00 37.00 2.52
6999 7763 6.648725 ATTCTTCTAGAACCGTTTGATTCG 57.351 37.500 0.00 0.00 37.00 3.34
7000 7764 3.924686 TCTTCTAGAACCGTTTGATTCGC 59.075 43.478 0.00 0.00 0.00 4.70
7001 7765 3.306917 TCTAGAACCGTTTGATTCGCA 57.693 42.857 0.00 0.00 0.00 5.10
7002 7766 3.655486 TCTAGAACCGTTTGATTCGCAA 58.345 40.909 0.00 0.00 33.88 4.85
7003 7767 2.681152 AGAACCGTTTGATTCGCAAC 57.319 45.000 0.00 0.00 35.91 4.17
7004 7768 1.944024 AGAACCGTTTGATTCGCAACA 59.056 42.857 0.00 0.00 35.91 3.33
7005 7769 2.032030 AGAACCGTTTGATTCGCAACAG 60.032 45.455 0.00 0.00 35.91 3.16
7006 7770 0.040425 ACCGTTTGATTCGCAACAGC 60.040 50.000 0.00 0.00 35.91 4.40
7025 7789 5.156804 CAGCGAACTGTTAAATGGATACC 57.843 43.478 0.00 0.00 39.22 2.73
7026 7790 4.035208 CAGCGAACTGTTAAATGGATACCC 59.965 45.833 0.00 0.00 39.22 3.69
7027 7791 4.080526 AGCGAACTGTTAAATGGATACCCT 60.081 41.667 0.00 0.00 0.00 4.34
7028 7792 4.638865 GCGAACTGTTAAATGGATACCCTT 59.361 41.667 0.00 0.00 0.00 3.95
7029 7793 5.124936 GCGAACTGTTAAATGGATACCCTTT 59.875 40.000 0.00 0.00 0.00 3.11
7030 7794 6.349860 GCGAACTGTTAAATGGATACCCTTTT 60.350 38.462 0.00 0.00 41.17 2.27
7031 7795 7.248437 CGAACTGTTAAATGGATACCCTTTTC 58.752 38.462 0.00 0.00 39.58 2.29
7032 7796 7.094549 CGAACTGTTAAATGGATACCCTTTTCA 60.095 37.037 0.00 0.00 39.58 2.69
7033 7797 7.462571 ACTGTTAAATGGATACCCTTTTCAC 57.537 36.000 0.00 0.00 39.58 3.18
7034 7798 6.436218 ACTGTTAAATGGATACCCTTTTCACC 59.564 38.462 0.00 0.00 39.58 4.02
7035 7799 5.717654 TGTTAAATGGATACCCTTTTCACCC 59.282 40.000 0.00 0.00 39.58 4.61
7036 7800 4.692523 AAATGGATACCCTTTTCACCCT 57.307 40.909 0.00 0.00 35.60 4.34
7037 7801 3.953542 ATGGATACCCTTTTCACCCTC 57.046 47.619 0.00 0.00 0.00 4.30
7038 7802 1.557832 TGGATACCCTTTTCACCCTCG 59.442 52.381 0.00 0.00 0.00 4.63
7039 7803 1.134189 GGATACCCTTTTCACCCTCGG 60.134 57.143 0.00 0.00 0.00 4.63
7040 7804 0.916809 ATACCCTTTTCACCCTCGGG 59.083 55.000 0.00 0.00 40.79 5.14
7060 7824 2.613026 GGGTTTCCCAAGTGGTTTTG 57.387 50.000 0.00 0.00 44.65 2.44
7061 7825 1.140052 GGGTTTCCCAAGTGGTTTTGG 59.860 52.381 0.00 0.00 44.65 3.28
7062 7826 1.474320 GGTTTCCCAAGTGGTTTTGGC 60.474 52.381 0.00 0.00 45.07 4.52
7063 7827 1.484653 GTTTCCCAAGTGGTTTTGGCT 59.515 47.619 0.00 0.00 45.07 4.75
7064 7828 1.118838 TTCCCAAGTGGTTTTGGCTG 58.881 50.000 0.00 0.00 45.07 4.85
7065 7829 0.260230 TCCCAAGTGGTTTTGGCTGA 59.740 50.000 0.00 0.00 45.07 4.26
7066 7830 1.133199 TCCCAAGTGGTTTTGGCTGAT 60.133 47.619 0.00 0.00 45.07 2.90
7067 7831 1.001181 CCCAAGTGGTTTTGGCTGATG 59.999 52.381 0.00 0.00 45.07 3.07
7068 7832 1.688197 CCAAGTGGTTTTGGCTGATGT 59.312 47.619 0.00 0.00 41.02 3.06
7069 7833 2.546373 CCAAGTGGTTTTGGCTGATGTG 60.546 50.000 0.00 0.00 41.02 3.21
7070 7834 1.331214 AGTGGTTTTGGCTGATGTGG 58.669 50.000 0.00 0.00 0.00 4.17
7071 7835 0.319813 GTGGTTTTGGCTGATGTGGC 60.320 55.000 0.00 0.00 0.00 5.01
7072 7836 0.469705 TGGTTTTGGCTGATGTGGCT 60.470 50.000 0.00 0.00 0.00 4.75
7073 7837 0.037975 GGTTTTGGCTGATGTGGCTG 60.038 55.000 0.00 0.00 0.00 4.85
7074 7838 0.668401 GTTTTGGCTGATGTGGCTGC 60.668 55.000 0.00 0.00 0.00 5.25
7078 7842 2.805546 GCTGATGTGGCTGCCATG 59.194 61.111 26.22 13.36 35.28 3.66
7079 7843 2.050350 GCTGATGTGGCTGCCATGT 61.050 57.895 26.22 16.38 35.28 3.21
7080 7844 1.807226 CTGATGTGGCTGCCATGTG 59.193 57.895 26.22 9.87 35.28 3.21
7081 7845 0.963856 CTGATGTGGCTGCCATGTGT 60.964 55.000 26.22 11.05 35.28 3.72
7082 7846 0.961857 TGATGTGGCTGCCATGTGTC 60.962 55.000 26.22 18.97 35.28 3.67
7083 7847 1.660560 GATGTGGCTGCCATGTGTCC 61.661 60.000 26.22 11.26 35.28 4.02
7084 7848 3.434319 GTGGCTGCCATGTGTCCG 61.434 66.667 26.22 0.00 35.28 4.79
7088 7852 4.758251 CTGCCATGTGTCCGCCGA 62.758 66.667 0.00 0.00 0.00 5.54
7091 7855 4.386951 CCATGTGTCCGCCGACCA 62.387 66.667 2.66 1.47 38.32 4.02
7092 7856 3.118454 CATGTGTCCGCCGACCAC 61.118 66.667 2.66 2.58 38.32 4.16
7093 7857 4.388499 ATGTGTCCGCCGACCACC 62.388 66.667 2.66 0.00 38.32 4.61
7097 7861 3.830192 GTCCGCCGACCACCGTAT 61.830 66.667 0.00 0.00 36.31 3.06
7098 7862 3.520862 TCCGCCGACCACCGTATC 61.521 66.667 0.00 0.00 36.31 2.24
7099 7863 3.829044 CCGCCGACCACCGTATCA 61.829 66.667 0.00 0.00 36.31 2.15
7100 7864 2.581409 CGCCGACCACCGTATCAC 60.581 66.667 0.00 0.00 36.31 3.06
7101 7865 2.890371 GCCGACCACCGTATCACT 59.110 61.111 0.00 0.00 36.31 3.41
7102 7866 1.518572 GCCGACCACCGTATCACTG 60.519 63.158 0.00 0.00 36.31 3.66
7103 7867 1.518572 CCGACCACCGTATCACTGC 60.519 63.158 0.00 0.00 36.31 4.40
7104 7868 1.518572 CGACCACCGTATCACTGCC 60.519 63.158 0.00 0.00 0.00 4.85
7105 7869 1.594833 GACCACCGTATCACTGCCA 59.405 57.895 0.00 0.00 0.00 4.92
7106 7870 0.178068 GACCACCGTATCACTGCCAT 59.822 55.000 0.00 0.00 0.00 4.40
7107 7871 0.107703 ACCACCGTATCACTGCCATG 60.108 55.000 0.00 0.00 0.00 3.66
7108 7872 0.107703 CCACCGTATCACTGCCATGT 60.108 55.000 0.00 0.00 0.00 3.21
7109 7873 1.290203 CACCGTATCACTGCCATGTC 58.710 55.000 0.00 0.00 0.00 3.06
7110 7874 0.179111 ACCGTATCACTGCCATGTCG 60.179 55.000 0.00 0.00 0.00 4.35
7111 7875 1.490693 CCGTATCACTGCCATGTCGC 61.491 60.000 0.00 0.00 0.00 5.19
7112 7876 1.490693 CGTATCACTGCCATGTCGCC 61.491 60.000 0.00 0.00 0.00 5.54
7113 7877 1.227234 TATCACTGCCATGTCGCCG 60.227 57.895 0.00 0.00 0.00 6.46
7114 7878 2.642996 TATCACTGCCATGTCGCCGG 62.643 60.000 0.00 0.00 0.00 6.13
7120 7884 4.096003 CCATGTCGCCGGGTTCCT 62.096 66.667 2.18 0.00 0.00 3.36
7121 7885 2.046314 CATGTCGCCGGGTTCCTT 60.046 61.111 2.18 0.00 0.00 3.36
7122 7886 1.674322 CATGTCGCCGGGTTCCTTT 60.674 57.895 2.18 0.00 0.00 3.11
7123 7887 1.074248 ATGTCGCCGGGTTCCTTTT 59.926 52.632 2.18 0.00 0.00 2.27
7124 7888 0.325602 ATGTCGCCGGGTTCCTTTTA 59.674 50.000 2.18 0.00 0.00 1.52
7125 7889 0.603439 TGTCGCCGGGTTCCTTTTAC 60.603 55.000 2.18 0.00 0.00 2.01
7126 7890 0.321034 GTCGCCGGGTTCCTTTTACT 60.321 55.000 2.18 0.00 0.00 2.24
7127 7891 0.320946 TCGCCGGGTTCCTTTTACTG 60.321 55.000 2.18 0.00 0.00 2.74
7128 7892 0.604511 CGCCGGGTTCCTTTTACTGT 60.605 55.000 2.18 0.00 0.00 3.55
7129 7893 1.612676 GCCGGGTTCCTTTTACTGTT 58.387 50.000 2.18 0.00 0.00 3.16
7130 7894 1.958579 GCCGGGTTCCTTTTACTGTTT 59.041 47.619 2.18 0.00 0.00 2.83
7131 7895 2.363038 GCCGGGTTCCTTTTACTGTTTT 59.637 45.455 2.18 0.00 0.00 2.43
7132 7896 3.569277 GCCGGGTTCCTTTTACTGTTTTA 59.431 43.478 2.18 0.00 0.00 1.52
7133 7897 4.219070 GCCGGGTTCCTTTTACTGTTTTAT 59.781 41.667 2.18 0.00 0.00 1.40
7134 7898 5.279106 GCCGGGTTCCTTTTACTGTTTTATT 60.279 40.000 2.18 0.00 0.00 1.40
7135 7899 6.739286 GCCGGGTTCCTTTTACTGTTTTATTT 60.739 38.462 2.18 0.00 0.00 1.40
7136 7900 6.864685 CCGGGTTCCTTTTACTGTTTTATTTC 59.135 38.462 0.00 0.00 0.00 2.17
7137 7901 7.255695 CCGGGTTCCTTTTACTGTTTTATTTCT 60.256 37.037 0.00 0.00 0.00 2.52
7138 7902 7.593644 CGGGTTCCTTTTACTGTTTTATTTCTG 59.406 37.037 0.00 0.00 0.00 3.02
7139 7903 7.384115 GGGTTCCTTTTACTGTTTTATTTCTGC 59.616 37.037 0.00 0.00 0.00 4.26
7140 7904 7.384115 GGTTCCTTTTACTGTTTTATTTCTGCC 59.616 37.037 0.00 0.00 0.00 4.85
7141 7905 7.589958 TCCTTTTACTGTTTTATTTCTGCCA 57.410 32.000 0.00 0.00 0.00 4.92
7142 7906 8.012957 TCCTTTTACTGTTTTATTTCTGCCAA 57.987 30.769 0.00 0.00 0.00 4.52
7143 7907 8.646900 TCCTTTTACTGTTTTATTTCTGCCAAT 58.353 29.630 0.00 0.00 0.00 3.16
7144 7908 9.271828 CCTTTTACTGTTTTATTTCTGCCAATT 57.728 29.630 0.00 0.00 0.00 2.32
7259 8023 2.093500 TGGTAGTGACATGGCTGACATC 60.093 50.000 0.00 0.00 37.84 3.06
7317 8081 1.688197 CCACCCAAGTGTGAAAAGCAT 59.312 47.619 0.00 0.00 42.88 3.79
7321 8085 2.546373 CCCAAGTGTGAAAAGCATGGTG 60.546 50.000 0.00 0.00 0.00 4.17
7324 8088 4.290155 CAAGTGTGAAAAGCATGGTGTAC 58.710 43.478 0.00 0.00 0.00 2.90
7325 8089 3.550820 AGTGTGAAAAGCATGGTGTACA 58.449 40.909 0.00 0.00 0.00 2.90
7696 8468 7.264947 ACAAAGTTGAGACACTTATTTTTGGG 58.735 34.615 0.00 0.00 35.87 4.12
7715 8487 0.530870 GCGGAGGGAGTACATGCTTC 60.531 60.000 0.00 0.00 0.00 3.86
7726 8498 5.066505 GGAGTACATGCTTCCTGGTTATTTG 59.933 44.000 0.00 0.00 0.00 2.32
7908 8680 1.825474 ACCTATCACGTCACCTCCAAG 59.175 52.381 0.00 0.00 0.00 3.61
7990 8762 8.196378 AGTAAGTCTTTCATTCTACCTGTCTT 57.804 34.615 0.00 0.00 0.00 3.01
7991 8763 8.652290 AGTAAGTCTTTCATTCTACCTGTCTTT 58.348 33.333 0.00 0.00 0.00 2.52
8068 8840 1.746220 GACTATCTGGCTGACGAGTGT 59.254 52.381 13.35 2.18 0.00 3.55
8121 8893 3.939066 TCCCTCAAGCAAAGTAGCTAAC 58.061 45.455 0.00 0.00 45.89 2.34
8132 8904 5.005490 GCAAAGTAGCTAACGAGGTAATGTC 59.995 44.000 0.00 0.00 37.41 3.06
8140 8912 2.379972 ACGAGGTAATGTCCTGGAGAG 58.620 52.381 0.00 0.00 38.02 3.20
8149 8921 1.416401 TGTCCTGGAGAGCGAACTTTT 59.584 47.619 0.00 0.00 0.00 2.27
8241 9014 4.461992 TTTTTAGTCGTGCTTCTTTCGG 57.538 40.909 0.00 0.00 0.00 4.30
8329 9102 3.691342 ACGCTCTGCCCGTAAGCA 61.691 61.111 0.00 0.00 41.46 3.91
8345 9118 4.084433 CGTAAGCAGTAGTCCTCGACTATC 60.084 50.000 4.90 0.54 45.21 2.08
8353 9126 3.892284 AGTCCTCGACTATCTGTGTGAT 58.108 45.455 0.00 0.00 41.51 3.06
8447 9222 9.638239 ATTTGGCAAGTAAATTGTGTACAATAG 57.362 29.630 10.37 0.18 45.06 1.73
8448 9223 7.987750 TGGCAAGTAAATTGTGTACAATAGA 57.012 32.000 10.37 0.03 45.06 1.98
8597 9373 2.026641 AGTTTGCTGCATGTGACAGTT 58.973 42.857 1.84 0.00 37.47 3.16
8642 9420 1.340248 CATCTATGGTAACTCGGGCGT 59.660 52.381 0.00 0.00 37.61 5.68
8692 9470 3.319137 TCATCAGGTACTTGTCTGCAC 57.681 47.619 4.75 0.00 34.60 4.57
8693 9471 2.028112 TCATCAGGTACTTGTCTGCACC 60.028 50.000 4.75 0.00 34.60 5.01
8694 9472 0.317160 TCAGGTACTTGTCTGCACCG 59.683 55.000 4.75 0.00 34.60 4.94
8695 9473 0.033504 CAGGTACTTGTCTGCACCGT 59.966 55.000 0.00 0.00 34.60 4.83
8759 9551 0.313043 CAGTTTGCTTCCACTGGCAG 59.687 55.000 14.16 14.16 39.68 4.85
8778 9570 4.506217 GCAGCGTTGTTTCGATATTAGAC 58.494 43.478 0.00 0.00 0.00 2.59
8807 12274 8.441312 TTCAATCAACTTTTTAACGAGGTAGT 57.559 30.769 0.00 0.00 0.00 2.73
8812 12279 6.647895 TCAACTTTTTAACGAGGTAGTCATCC 59.352 38.462 0.00 0.00 0.00 3.51
8814 12281 3.788333 TTTAACGAGGTAGTCATCCCG 57.212 47.619 0.00 0.00 0.00 5.14
8831 12647 0.179056 CCGGGTTACCATCGATTGCT 60.179 55.000 2.98 0.00 36.13 3.91
8832 12648 1.069513 CCGGGTTACCATCGATTGCTA 59.930 52.381 2.98 0.00 36.13 3.49
8833 12649 2.404215 CGGGTTACCATCGATTGCTAG 58.596 52.381 2.98 0.00 36.13 3.42
8834 12650 2.143925 GGGTTACCATCGATTGCTAGC 58.856 52.381 8.10 8.10 36.50 3.42
8861 12760 4.500205 CGAGTTGGTCTAGTGGTTTGTGTA 60.500 45.833 0.00 0.00 0.00 2.90
8924 12824 8.357796 TGAAAATTTATGAACATTGCGTGAAA 57.642 26.923 0.00 0.00 0.00 2.69
8925 12825 8.486383 TGAAAATTTATGAACATTGCGTGAAAG 58.514 29.630 0.00 0.00 0.00 2.62
8926 12826 8.586570 AAAATTTATGAACATTGCGTGAAAGA 57.413 26.923 0.00 0.00 0.00 2.52
8927 12827 8.761575 AAATTTATGAACATTGCGTGAAAGAT 57.238 26.923 0.00 0.00 0.00 2.40
8928 12828 7.975866 ATTTATGAACATTGCGTGAAAGATC 57.024 32.000 0.00 0.00 0.00 2.75
8930 12830 3.145286 TGAACATTGCGTGAAAGATCCA 58.855 40.909 0.00 0.00 0.00 3.41
8932 12832 3.559238 ACATTGCGTGAAAGATCCAAC 57.441 42.857 0.00 0.00 0.00 3.77
8933 12833 2.884012 ACATTGCGTGAAAGATCCAACA 59.116 40.909 0.00 0.00 0.00 3.33
8934 12834 3.507233 ACATTGCGTGAAAGATCCAACAT 59.493 39.130 0.00 0.00 0.00 2.71
8935 12835 4.699735 ACATTGCGTGAAAGATCCAACATA 59.300 37.500 0.00 0.00 0.00 2.29
8936 12836 4.678509 TTGCGTGAAAGATCCAACATAC 57.321 40.909 0.00 0.00 0.00 2.39
8937 12837 3.669536 TGCGTGAAAGATCCAACATACA 58.330 40.909 0.00 0.00 0.00 2.29
8938 12838 4.260985 TGCGTGAAAGATCCAACATACAT 58.739 39.130 0.00 0.00 0.00 2.29
8939 12839 5.423886 TGCGTGAAAGATCCAACATACATA 58.576 37.500 0.00 0.00 0.00 2.29
8940 12840 5.523552 TGCGTGAAAGATCCAACATACATAG 59.476 40.000 0.00 0.00 0.00 2.23
8941 12841 5.050091 GCGTGAAAGATCCAACATACATAGG 60.050 44.000 0.00 0.00 0.00 2.57
8942 12842 6.049149 CGTGAAAGATCCAACATACATAGGT 58.951 40.000 0.00 0.00 0.00 3.08
8943 12843 6.201044 CGTGAAAGATCCAACATACATAGGTC 59.799 42.308 0.00 0.00 0.00 3.85
8944 12844 6.483640 GTGAAAGATCCAACATACATAGGTCC 59.516 42.308 0.00 0.00 0.00 4.46
8945 12845 6.157820 TGAAAGATCCAACATACATAGGTCCA 59.842 38.462 0.00 0.00 0.00 4.02
8946 12846 6.575244 AAGATCCAACATACATAGGTCCAA 57.425 37.500 0.00 0.00 0.00 3.53
8947 12847 6.179906 AGATCCAACATACATAGGTCCAAG 57.820 41.667 0.00 0.00 0.00 3.61
8948 12848 5.905331 AGATCCAACATACATAGGTCCAAGA 59.095 40.000 0.00 0.00 0.00 3.02
8949 12849 6.386927 AGATCCAACATACATAGGTCCAAGAA 59.613 38.462 0.00 0.00 0.00 2.52
8950 12850 5.989477 TCCAACATACATAGGTCCAAGAAG 58.011 41.667 0.00 0.00 0.00 2.85
8951 12851 5.724370 TCCAACATACATAGGTCCAAGAAGA 59.276 40.000 0.00 0.00 0.00 2.87
8952 12852 6.214615 TCCAACATACATAGGTCCAAGAAGAA 59.785 38.462 0.00 0.00 0.00 2.52
8953 12853 6.540189 CCAACATACATAGGTCCAAGAAGAAG 59.460 42.308 0.00 0.00 0.00 2.85
8954 12854 6.240549 ACATACATAGGTCCAAGAAGAAGG 57.759 41.667 0.00 0.00 0.00 3.46
8955 12855 5.131142 ACATACATAGGTCCAAGAAGAAGGG 59.869 44.000 0.00 0.00 0.00 3.95
8956 12856 3.803340 ACATAGGTCCAAGAAGAAGGGA 58.197 45.455 0.00 0.00 0.00 4.20
8957 12857 4.175962 ACATAGGTCCAAGAAGAAGGGAA 58.824 43.478 0.00 0.00 31.32 3.97
8958 12858 4.601857 ACATAGGTCCAAGAAGAAGGGAAA 59.398 41.667 0.00 0.00 31.32 3.13
8959 12859 5.254032 ACATAGGTCCAAGAAGAAGGGAAAT 59.746 40.000 0.00 0.00 31.32 2.17
8960 12860 4.749048 AGGTCCAAGAAGAAGGGAAATT 57.251 40.909 0.00 0.00 31.32 1.82
8961 12861 5.079998 AGGTCCAAGAAGAAGGGAAATTT 57.920 39.130 0.00 0.00 31.32 1.82
8962 12862 5.467738 AGGTCCAAGAAGAAGGGAAATTTT 58.532 37.500 0.00 0.00 31.32 1.82
8963 12863 5.905331 AGGTCCAAGAAGAAGGGAAATTTTT 59.095 36.000 0.00 0.00 31.32 1.94
8964 12864 7.073208 AGGTCCAAGAAGAAGGGAAATTTTTA 58.927 34.615 0.00 0.00 31.32 1.52
8965 12865 7.015292 AGGTCCAAGAAGAAGGGAAATTTTTAC 59.985 37.037 0.00 0.00 31.32 2.01
8966 12866 7.152645 GTCCAAGAAGAAGGGAAATTTTTACC 58.847 38.462 0.00 0.00 41.74 2.85
8967 12867 6.841755 TCCAAGAAGAAGGGAAATTTTTACCA 59.158 34.615 7.05 0.00 43.99 3.25
8968 12868 7.512402 TCCAAGAAGAAGGGAAATTTTTACCAT 59.488 33.333 7.05 0.00 43.99 3.55
8969 12869 8.811994 CCAAGAAGAAGGGAAATTTTTACCATA 58.188 33.333 7.05 0.00 43.99 2.74
8972 12872 9.374711 AGAAGAAGGGAAATTTTTACCATAACA 57.625 29.630 7.05 0.00 43.99 2.41
8975 12875 8.466798 AGAAGGGAAATTTTTACCATAACATCG 58.533 33.333 7.05 0.00 43.99 3.84
8976 12876 7.107639 AGGGAAATTTTTACCATAACATCGG 57.892 36.000 7.05 0.00 43.99 4.18
8977 12877 6.893005 AGGGAAATTTTTACCATAACATCGGA 59.107 34.615 7.05 0.00 43.99 4.55
8978 12878 7.563556 AGGGAAATTTTTACCATAACATCGGAT 59.436 33.333 7.05 0.00 43.99 4.18
8979 12879 7.865889 GGGAAATTTTTACCATAACATCGGATC 59.134 37.037 0.00 0.00 41.05 3.36
8980 12880 7.865889 GGAAATTTTTACCATAACATCGGATCC 59.134 37.037 0.00 0.00 0.00 3.36
8981 12881 8.533569 AAATTTTTACCATAACATCGGATCCT 57.466 30.769 10.75 0.00 0.00 3.24
8982 12882 7.745620 ATTTTTACCATAACATCGGATCCTC 57.254 36.000 10.75 0.00 0.00 3.71
8983 12883 4.884668 TTACCATAACATCGGATCCTCC 57.115 45.455 10.75 0.00 0.00 4.30
9001 12901 8.936864 GGATCCTCCGTTTACAAATATAAGATG 58.063 37.037 3.84 0.00 0.00 2.90
9002 12902 9.490379 GATCCTCCGTTTACAAATATAAGATGT 57.510 33.333 0.00 0.00 0.00 3.06
9003 12903 8.882415 TCCTCCGTTTACAAATATAAGATGTC 57.118 34.615 0.00 0.00 0.00 3.06
9004 12904 8.701895 TCCTCCGTTTACAAATATAAGATGTCT 58.298 33.333 0.00 0.00 0.00 3.41
9005 12905 8.979574 CCTCCGTTTACAAATATAAGATGTCTC 58.020 37.037 0.00 0.00 0.00 3.36
9006 12906 8.882415 TCCGTTTACAAATATAAGATGTCTCC 57.118 34.615 0.00 0.00 0.00 3.71
9007 12907 8.479689 TCCGTTTACAAATATAAGATGTCTCCA 58.520 33.333 0.00 0.00 0.00 3.86
9008 12908 9.104965 CCGTTTACAAATATAAGATGTCTCCAA 57.895 33.333 0.00 0.00 0.00 3.53
9042 12942 5.496133 AGATTGCATACAGACTGAAATGC 57.504 39.130 26.65 26.65 39.18 3.56
9043 12943 3.745332 TTGCATACAGACTGAAATGCG 57.255 42.857 27.04 8.15 40.49 4.73
9044 12944 2.698803 TGCATACAGACTGAAATGCGT 58.301 42.857 27.04 4.50 40.49 5.24
9045 12945 2.416202 TGCATACAGACTGAAATGCGTG 59.584 45.455 27.04 11.59 40.49 5.34
9046 12946 2.672874 GCATACAGACTGAAATGCGTGA 59.327 45.455 22.55 0.00 33.40 4.35
9047 12947 3.125146 GCATACAGACTGAAATGCGTGAA 59.875 43.478 22.55 0.00 33.40 3.18
9048 12948 4.641954 CATACAGACTGAAATGCGTGAAC 58.358 43.478 10.08 0.00 0.00 3.18
9049 12949 2.838736 ACAGACTGAAATGCGTGAACT 58.161 42.857 10.08 0.00 0.00 3.01
9050 12950 3.990092 ACAGACTGAAATGCGTGAACTA 58.010 40.909 10.08 0.00 0.00 2.24
9051 12951 4.377021 ACAGACTGAAATGCGTGAACTAA 58.623 39.130 10.08 0.00 0.00 2.24
9052 12952 4.211374 ACAGACTGAAATGCGTGAACTAAC 59.789 41.667 10.08 0.00 0.00 2.34
9053 12953 4.211164 CAGACTGAAATGCGTGAACTAACA 59.789 41.667 0.00 0.00 0.00 2.41
9054 12954 4.211374 AGACTGAAATGCGTGAACTAACAC 59.789 41.667 0.00 0.00 37.42 3.32
9055 12955 3.874543 ACTGAAATGCGTGAACTAACACA 59.125 39.130 0.00 0.00 40.34 3.72
9056 12956 4.203950 TGAAATGCGTGAACTAACACAC 57.796 40.909 0.00 0.00 40.34 3.82
9057 12957 3.874543 TGAAATGCGTGAACTAACACACT 59.125 39.130 0.00 0.00 40.34 3.55
9058 12958 5.051153 TGAAATGCGTGAACTAACACACTA 58.949 37.500 0.00 0.00 40.34 2.74
9059 12959 5.176774 TGAAATGCGTGAACTAACACACTAG 59.823 40.000 0.00 0.00 40.34 2.57
9060 12960 3.994204 TGCGTGAACTAACACACTAGA 57.006 42.857 0.00 0.00 40.34 2.43
9061 12961 3.635331 TGCGTGAACTAACACACTAGAC 58.365 45.455 0.00 0.00 40.34 2.59
9062 12962 2.655474 GCGTGAACTAACACACTAGACG 59.345 50.000 0.00 0.00 40.34 4.18
9063 12963 3.851105 GCGTGAACTAACACACTAGACGT 60.851 47.826 0.00 0.00 40.34 4.34
9064 12964 4.611355 GCGTGAACTAACACACTAGACGTA 60.611 45.833 0.00 0.00 40.34 3.57
9065 12965 5.625251 CGTGAACTAACACACTAGACGTAT 58.375 41.667 0.00 0.00 40.34 3.06
9066 12966 5.731723 CGTGAACTAACACACTAGACGTATC 59.268 44.000 0.00 0.00 40.34 2.24
9067 12967 5.731723 GTGAACTAACACACTAGACGTATCG 59.268 44.000 0.00 0.00 40.11 2.92
9068 12968 5.639082 TGAACTAACACACTAGACGTATCGA 59.361 40.000 0.00 0.00 0.00 3.59
9069 12969 6.314648 TGAACTAACACACTAGACGTATCGAT 59.685 38.462 2.16 2.16 0.00 3.59
9070 12970 6.045698 ACTAACACACTAGACGTATCGATG 57.954 41.667 8.54 0.00 0.00 3.84
9071 12971 4.959596 AACACACTAGACGTATCGATGT 57.040 40.909 8.54 0.00 0.00 3.06
9072 12972 6.758416 ACTAACACACTAGACGTATCGATGTA 59.242 38.462 8.54 0.00 0.00 2.29
9073 12973 6.426980 AACACACTAGACGTATCGATGTAA 57.573 37.500 8.54 0.00 0.00 2.41
9074 12974 6.426980 ACACACTAGACGTATCGATGTAAA 57.573 37.500 8.54 0.00 0.00 2.01
9075 12975 6.845302 ACACACTAGACGTATCGATGTAAAA 58.155 36.000 8.54 0.00 0.00 1.52
9076 12976 6.744537 ACACACTAGACGTATCGATGTAAAAC 59.255 38.462 8.54 0.00 0.00 2.43
9077 12977 6.744082 CACACTAGACGTATCGATGTAAAACA 59.256 38.462 8.54 0.00 0.00 2.83
9078 12978 6.744537 ACACTAGACGTATCGATGTAAAACAC 59.255 38.462 8.54 0.00 0.00 3.32
9079 12979 6.744082 CACTAGACGTATCGATGTAAAACACA 59.256 38.462 8.54 0.00 42.69 3.72
9080 12980 6.744537 ACTAGACGTATCGATGTAAAACACAC 59.255 38.462 8.54 0.00 40.86 3.82
9081 12981 5.463286 AGACGTATCGATGTAAAACACACA 58.537 37.500 8.54 0.00 40.86 3.72
9082 12982 5.344128 AGACGTATCGATGTAAAACACACAC 59.656 40.000 8.54 0.00 40.86 3.82
9083 12983 4.983538 ACGTATCGATGTAAAACACACACA 59.016 37.500 8.54 0.00 40.86 3.72
9084 12984 5.107760 ACGTATCGATGTAAAACACACACAC 60.108 40.000 8.54 0.00 40.86 3.82
9085 12985 5.107798 CGTATCGATGTAAAACACACACACA 60.108 40.000 8.54 0.00 40.86 3.72
9086 12986 4.523853 TCGATGTAAAACACACACACAC 57.476 40.909 0.00 0.00 40.86 3.82
9087 12987 4.185394 TCGATGTAAAACACACACACACT 58.815 39.130 0.00 0.00 40.86 3.55
9088 12988 5.349809 TCGATGTAAAACACACACACACTA 58.650 37.500 0.00 0.00 40.86 2.74
9089 12989 5.811100 TCGATGTAAAACACACACACACTAA 59.189 36.000 0.00 0.00 40.86 2.24
9090 12990 6.313164 TCGATGTAAAACACACACACACTAAA 59.687 34.615 0.00 0.00 40.86 1.85
9091 12991 6.409761 CGATGTAAAACACACACACACTAAAC 59.590 38.462 0.00 0.00 40.86 2.01
9092 12992 5.619513 TGTAAAACACACACACACTAAACG 58.380 37.500 0.00 0.00 30.04 3.60
9093 12993 4.752661 AAAACACACACACACTAAACGT 57.247 36.364 0.00 0.00 0.00 3.99
9094 12994 5.859521 AAAACACACACACACTAAACGTA 57.140 34.783 0.00 0.00 0.00 3.57
9095 12995 6.425577 AAAACACACACACACTAAACGTAT 57.574 33.333 0.00 0.00 0.00 3.06
9096 12996 5.646467 AACACACACACACTAAACGTATC 57.354 39.130 0.00 0.00 0.00 2.24
9097 12997 4.940463 ACACACACACACTAAACGTATCT 58.060 39.130 0.00 0.00 0.00 1.98
9098 12998 6.075762 ACACACACACACTAAACGTATCTA 57.924 37.500 0.00 0.00 0.00 1.98
9099 12999 6.684686 ACACACACACACTAAACGTATCTAT 58.315 36.000 0.00 0.00 0.00 1.98
9100 13000 7.819644 ACACACACACACTAAACGTATCTATA 58.180 34.615 0.00 0.00 0.00 1.31
9101 13001 8.298854 ACACACACACACTAAACGTATCTATAA 58.701 33.333 0.00 0.00 0.00 0.98
9102 13002 9.131416 CACACACACACTAAACGTATCTATAAA 57.869 33.333 0.00 0.00 0.00 1.40
9103 13003 9.865321 ACACACACACTAAACGTATCTATAAAT 57.135 29.630 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 6.835488 ACATATGCAACATTATCAAAGAGGGT 59.165 34.615 1.58 0.00 0.00 4.34
247 249 2.478894 ACACAAAAGTAGCAACGATCGG 59.521 45.455 20.98 3.26 0.00 4.18
559 561 3.883744 GATATGGGGCGCCTGGTCG 62.884 68.421 28.56 6.22 0.00 4.79
560 562 2.032681 GATATGGGGCGCCTGGTC 59.967 66.667 28.56 9.46 0.00 4.02
561 563 3.570212 GGATATGGGGCGCCTGGT 61.570 66.667 28.56 14.58 0.00 4.00
562 564 4.704833 CGGATATGGGGCGCCTGG 62.705 72.222 28.56 2.81 0.00 4.45
567 569 1.613317 TATGGAGCGGATATGGGGCG 61.613 60.000 0.00 0.00 0.00 6.13
568 570 0.839946 ATATGGAGCGGATATGGGGC 59.160 55.000 0.00 0.00 0.00 5.80
569 571 3.282021 CAAATATGGAGCGGATATGGGG 58.718 50.000 0.00 0.00 0.00 4.96
665 667 1.066918 GTCACAGTCCGGTCACGTT 59.933 57.895 0.00 0.00 38.78 3.99
666 668 2.726274 GTCACAGTCCGGTCACGT 59.274 61.111 0.00 0.00 38.78 4.49
667 669 2.049433 GGTCACAGTCCGGTCACG 60.049 66.667 0.00 0.00 40.55 4.35
668 670 2.049433 CGGTCACAGTCCGGTCAC 60.049 66.667 0.00 0.00 43.68 3.67
693 695 4.946411 GCCTCATACGTCTAGGCG 57.054 61.111 16.63 16.63 45.82 5.52
696 698 3.064958 TCAAACTCGCCTCATACGTCTAG 59.935 47.826 0.00 0.00 0.00 2.43
697 699 3.011818 TCAAACTCGCCTCATACGTCTA 58.988 45.455 0.00 0.00 0.00 2.59
699 701 2.186076 CTCAAACTCGCCTCATACGTC 58.814 52.381 0.00 0.00 0.00 4.34
700 702 1.135083 CCTCAAACTCGCCTCATACGT 60.135 52.381 0.00 0.00 0.00 3.57
711 713 1.226746 CAACCGGACACCTCAAACTC 58.773 55.000 9.46 0.00 0.00 3.01
712 714 0.544697 ACAACCGGACACCTCAAACT 59.455 50.000 9.46 0.00 0.00 2.66
713 715 2.140717 CTACAACCGGACACCTCAAAC 58.859 52.381 9.46 0.00 0.00 2.93
736 738 2.748605 CATCCATGTCTCGGTTAGAGC 58.251 52.381 0.00 0.00 46.44 4.09
756 758 0.597377 CCTGTTCTTTTGGCCGTTGC 60.597 55.000 0.00 0.00 0.00 4.17
808 811 5.772521 CAACTAATTCAAGTCCACCCTTTG 58.227 41.667 0.00 0.00 0.00 2.77
809 812 4.280929 GCAACTAATTCAAGTCCACCCTTT 59.719 41.667 0.00 0.00 0.00 3.11
811 814 3.181434 TGCAACTAATTCAAGTCCACCCT 60.181 43.478 0.00 0.00 0.00 4.34
829 832 9.515226 AATTTAGGACAGTATAAGAAACTGCAA 57.485 29.630 3.24 0.00 46.73 4.08
840 843 7.256547 GGCCCATGTAGAATTTAGGACAGTATA 60.257 40.741 0.00 0.00 0.00 1.47
841 844 6.465894 GGCCCATGTAGAATTTAGGACAGTAT 60.466 42.308 0.00 0.00 0.00 2.12
844 847 4.137543 GGCCCATGTAGAATTTAGGACAG 58.862 47.826 0.00 0.00 0.00 3.51
845 848 3.433031 CGGCCCATGTAGAATTTAGGACA 60.433 47.826 0.00 0.00 0.00 4.02
846 849 3.139077 CGGCCCATGTAGAATTTAGGAC 58.861 50.000 0.00 0.00 0.00 3.85
873 876 3.392616 ACTGATCTCTGGTGAGTTTGGTT 59.607 43.478 0.00 0.00 40.98 3.67
1063 1073 1.004440 GGAGGAACTTGAGCTGCGT 60.004 57.895 0.00 0.00 41.55 5.24
1589 1599 1.462378 CGCACACAGAGCAATTACACG 60.462 52.381 0.00 0.00 0.00 4.49
1627 1637 0.393808 CAACCCCCAACTCATACCGG 60.394 60.000 0.00 0.00 0.00 5.28
1642 1652 1.676006 CCTATTCCCATGTTCGCAACC 59.324 52.381 0.00 0.00 0.00 3.77
1689 1699 0.038343 ACCGCACCAATGTCAAATGC 60.038 50.000 0.00 0.00 0.00 3.56
1721 1731 8.464770 TGACATAGATTGTGCAAAATTTTAGC 57.535 30.769 2.99 10.18 39.18 3.09
1785 1796 8.090214 TCTTTAAATGCATTTGAGAGAAAAGGG 58.910 33.333 30.43 13.01 0.00 3.95
1789 1800 9.985730 ATTGTCTTTAAATGCATTTGAGAGAAA 57.014 25.926 30.78 26.15 34.08 2.52
1805 1816 9.177608 CTTCCATGACTATTCCATTGTCTTTAA 57.822 33.333 0.00 0.00 36.26 1.52
1811 1822 9.699410 TTATTTCTTCCATGACTATTCCATTGT 57.301 29.630 0.00 0.00 0.00 2.71
1822 2234 4.500375 GCCAGCCATTATTTCTTCCATGAC 60.500 45.833 0.00 0.00 0.00 3.06
1906 2318 3.426695 GGATGGAGCACATTTTCTGTTCG 60.427 47.826 0.00 0.00 40.72 3.95
1950 2362 6.564709 AGGAACCAAACGATAAAGTTAACC 57.435 37.500 0.88 0.00 33.41 2.85
2112 2524 4.791734 GCTGGCCTTGTGTTTACACTTTAC 60.792 45.833 13.61 2.34 46.55 2.01
2164 2576 3.447229 CCCCAACAAATACCTAGCCAAAG 59.553 47.826 0.00 0.00 0.00 2.77
2175 2587 4.222336 CAATATCCCAGCCCCAACAAATA 58.778 43.478 0.00 0.00 0.00 1.40
2228 2640 6.318900 CAGTACAGATTTTTATTGAGGACCCC 59.681 42.308 0.00 0.00 0.00 4.95
2263 2675 2.026822 ACACTGGCACTCCTAATTCCTG 60.027 50.000 0.00 0.00 0.00 3.86
2464 2876 4.472691 TTCAAACTTCAGTCTTGCATCG 57.527 40.909 0.00 0.00 0.00 3.84
2718 3130 8.815141 TGAACACAAATATTGGAAAAGTCATG 57.185 30.769 0.00 0.00 34.12 3.07
2764 3180 4.307259 ACCCTACCAGTTGATGATACCAT 58.693 43.478 0.00 0.00 35.29 3.55
2851 3267 7.989741 ACCTCATCTGACTACAAAGAAATATGG 59.010 37.037 0.00 0.00 0.00 2.74
3253 3669 5.811100 CCCGTCTATTTCAAAGGAGTAGTTC 59.189 44.000 0.00 0.00 0.00 3.01
3276 3697 0.540597 ACTGGGAAAGAAGCAAGGCC 60.541 55.000 0.00 0.00 0.00 5.19
3385 3806 9.783256 GCAATAGGAAGTACGACAAAATTTTAT 57.217 29.630 2.44 0.00 0.00 1.40
3390 3811 4.638865 GGGCAATAGGAAGTACGACAAAAT 59.361 41.667 0.00 0.00 0.00 1.82
3483 3904 2.250924 TGGAGAAGATGCACACTCTCA 58.749 47.619 17.77 9.24 0.00 3.27
3570 3992 7.227512 GCTGGAACATTCTTAAGCAGTACATAT 59.772 37.037 0.00 0.00 38.20 1.78
3798 4220 2.397044 ATTTTGGGGAGTTCTGCCAA 57.603 45.000 12.10 0.00 0.00 4.52
3915 4338 9.967559 AACCCCTAAATTCCATTAAATTATCCT 57.032 29.630 0.00 0.00 0.00 3.24
4067 4490 5.335191 GCTTAACACCATCCACAGAGAAAAG 60.335 44.000 0.00 0.00 0.00 2.27
4517 4943 7.066645 TCCATAATGAAATCTTGAGCACAGAAG 59.933 37.037 0.00 0.00 0.00 2.85
4610 5036 4.507756 GCTGCTACGATGTCAACAATATCA 59.492 41.667 0.00 0.00 0.00 2.15
4671 5101 8.653191 TGTCCAAACAAGTCTACTAATAAAGGA 58.347 33.333 0.00 0.00 30.70 3.36
4697 5127 7.671398 AGTGAAATTTCAGTTTCCAGTGGATAT 59.329 33.333 21.05 0.00 37.57 1.63
5010 5460 2.209690 TCCCCGAAATGGAAAGAACC 57.790 50.000 0.00 0.00 42.00 3.62
5093 5543 9.391006 TCTTTTATTTATTGATTAGCTCCACGT 57.609 29.630 0.00 0.00 0.00 4.49
5179 5630 2.844451 GCAACCCGCACAGCTTGAA 61.844 57.895 0.00 0.00 41.79 2.69
5232 5683 7.310361 CCCTTGGCACTTTTTAAATAAGGATGA 60.310 37.037 0.00 0.00 36.43 2.92
5298 5749 2.614057 CAGGTCACTTTGTCCAACACTC 59.386 50.000 0.00 0.00 0.00 3.51
5299 5750 2.238646 TCAGGTCACTTTGTCCAACACT 59.761 45.455 0.00 0.00 0.00 3.55
5300 5751 2.639065 TCAGGTCACTTTGTCCAACAC 58.361 47.619 0.00 0.00 0.00 3.32
5301 5752 3.013921 GTTCAGGTCACTTTGTCCAACA 58.986 45.455 0.00 0.00 0.00 3.33
5302 5753 3.279434 AGTTCAGGTCACTTTGTCCAAC 58.721 45.455 0.00 0.00 0.00 3.77
5303 5754 3.199946 AGAGTTCAGGTCACTTTGTCCAA 59.800 43.478 0.00 0.00 0.00 3.53
5304 5755 2.771943 AGAGTTCAGGTCACTTTGTCCA 59.228 45.455 0.00 0.00 0.00 4.02
5305 5756 3.134458 CAGAGTTCAGGTCACTTTGTCC 58.866 50.000 0.00 0.00 0.00 4.02
5346 5797 4.666253 GGGCAGCAGGAACAGGCA 62.666 66.667 0.00 0.00 33.33 4.75
5414 5865 1.569984 GCTTTTATAGCCGCGAGCC 59.430 57.895 8.23 0.00 44.48 4.70
5440 5891 3.127250 AGGAGTGGAGATAGAGGAGTCA 58.873 50.000 0.00 0.00 0.00 3.41
5660 6111 4.241555 GAGCACGCCCGGGATGAT 62.242 66.667 29.31 21.23 0.00 2.45
5669 6120 3.112709 GAGTCCAACGAGCACGCC 61.113 66.667 2.62 0.00 43.96 5.68
5775 6226 2.092968 CCAGCAAGGTAGGCAGTAATGA 60.093 50.000 0.00 0.00 0.00 2.57
5812 6263 1.296392 CCAGGCCGTGTTCTCATCA 59.704 57.895 0.00 0.00 0.00 3.07
5813 6264 2.109126 GCCAGGCCGTGTTCTCATC 61.109 63.158 0.00 0.00 0.00 2.92
5835 6287 2.170166 TCTGCCATGGCTTTTTCGAAT 58.830 42.857 35.53 0.00 42.51 3.34
5841 6293 2.773993 CCAATTCTGCCATGGCTTTT 57.226 45.000 35.53 20.34 42.51 2.27
5910 6362 3.543537 CCCTCCTCGACATCAGGG 58.456 66.667 0.00 0.00 39.90 4.45
6052 6504 5.094387 AGAGACATTTTAGAGAAGGGGACA 58.906 41.667 0.00 0.00 0.00 4.02
6073 6525 6.383147 CCAGGGGTAAGATTAGTCACTTTAGA 59.617 42.308 0.00 0.00 0.00 2.10
6291 6812 3.069443 TCAACAGCCTCCAAAATGGTTTC 59.931 43.478 0.00 0.00 39.03 2.78
6311 6832 5.426689 AATCTAGCAGATTCACCACTTCA 57.573 39.130 5.80 0.00 40.75 3.02
6319 6840 8.976353 AGACTTTAGAGAAATCTAGCAGATTCA 58.024 33.333 10.52 0.00 43.67 2.57
6334 6855 2.930109 AGCCCCTGAGACTTTAGAGA 57.070 50.000 0.00 0.00 0.00 3.10
6516 7037 1.067985 CACAGAGCTCAGATGACACGT 60.068 52.381 17.77 0.00 0.00 4.49
6814 7578 4.648762 ACAAGAAATGGATGTTGGTTGTGA 59.351 37.500 0.00 0.00 0.00 3.58
6921 7685 8.671028 GGTTCAAGACTGTTTTTCTGTTAGTAA 58.329 33.333 0.00 0.00 0.00 2.24
6922 7686 7.281549 GGGTTCAAGACTGTTTTTCTGTTAGTA 59.718 37.037 0.00 0.00 0.00 1.82
6923 7687 6.095021 GGGTTCAAGACTGTTTTTCTGTTAGT 59.905 38.462 0.00 0.00 0.00 2.24
6924 7688 6.318900 AGGGTTCAAGACTGTTTTTCTGTTAG 59.681 38.462 0.00 0.00 0.00 2.34
6925 7689 6.094881 CAGGGTTCAAGACTGTTTTTCTGTTA 59.905 38.462 0.00 0.00 0.00 2.41
6926 7690 5.016831 AGGGTTCAAGACTGTTTTTCTGTT 58.983 37.500 0.00 0.00 0.00 3.16
6927 7691 4.399303 CAGGGTTCAAGACTGTTTTTCTGT 59.601 41.667 0.00 0.00 0.00 3.41
6928 7692 4.640201 TCAGGGTTCAAGACTGTTTTTCTG 59.360 41.667 0.00 0.00 34.02 3.02
6929 7693 4.855340 TCAGGGTTCAAGACTGTTTTTCT 58.145 39.130 0.00 0.00 34.02 2.52
6930 7694 5.576447 TTCAGGGTTCAAGACTGTTTTTC 57.424 39.130 0.00 0.00 34.02 2.29
6931 7695 5.993748 TTTCAGGGTTCAAGACTGTTTTT 57.006 34.783 0.00 0.00 34.02 1.94
6932 7696 6.544928 AATTTCAGGGTTCAAGACTGTTTT 57.455 33.333 0.00 0.00 34.02 2.43
6933 7697 6.544928 AAATTTCAGGGTTCAAGACTGTTT 57.455 33.333 0.00 0.00 34.02 2.83
6934 7698 7.505585 TCATAAATTTCAGGGTTCAAGACTGTT 59.494 33.333 0.00 0.00 34.02 3.16
6935 7699 7.004086 TCATAAATTTCAGGGTTCAAGACTGT 58.996 34.615 0.00 0.00 34.02 3.55
6936 7700 7.452880 TCATAAATTTCAGGGTTCAAGACTG 57.547 36.000 0.00 0.00 0.00 3.51
6937 7701 8.360390 GTTTCATAAATTTCAGGGTTCAAGACT 58.640 33.333 0.00 0.00 0.00 3.24
6938 7702 8.141268 TGTTTCATAAATTTCAGGGTTCAAGAC 58.859 33.333 0.00 0.00 0.00 3.01
6939 7703 8.243961 TGTTTCATAAATTTCAGGGTTCAAGA 57.756 30.769 0.00 0.00 0.00 3.02
6940 7704 9.492973 AATGTTTCATAAATTTCAGGGTTCAAG 57.507 29.630 0.00 0.00 0.00 3.02
6941 7705 9.487790 GAATGTTTCATAAATTTCAGGGTTCAA 57.512 29.630 0.00 0.00 0.00 2.69
6942 7706 8.646004 TGAATGTTTCATAAATTTCAGGGTTCA 58.354 29.630 0.00 0.00 34.08 3.18
6943 7707 8.925700 GTGAATGTTTCATAAATTTCAGGGTTC 58.074 33.333 0.00 0.00 42.47 3.62
6944 7708 8.650490 AGTGAATGTTTCATAAATTTCAGGGTT 58.350 29.630 0.00 0.00 42.47 4.11
6945 7709 8.193953 AGTGAATGTTTCATAAATTTCAGGGT 57.806 30.769 0.00 0.00 42.47 4.34
6946 7710 9.492973 AAAGTGAATGTTTCATAAATTTCAGGG 57.507 29.630 0.00 0.00 42.47 4.45
6963 7727 9.617975 GGTTCTAGAAGAATTGAAAAGTGAATG 57.382 33.333 5.12 0.00 36.50 2.67
6964 7728 8.507249 CGGTTCTAGAAGAATTGAAAAGTGAAT 58.493 33.333 5.12 0.00 36.50 2.57
6965 7729 7.497909 ACGGTTCTAGAAGAATTGAAAAGTGAA 59.502 33.333 5.12 0.00 36.50 3.18
6966 7730 6.990349 ACGGTTCTAGAAGAATTGAAAAGTGA 59.010 34.615 5.12 0.00 36.50 3.41
6967 7731 7.190920 ACGGTTCTAGAAGAATTGAAAAGTG 57.809 36.000 5.12 0.00 36.50 3.16
6968 7732 7.803279 AACGGTTCTAGAAGAATTGAAAAGT 57.197 32.000 5.12 0.00 36.50 2.66
6969 7733 8.342634 TCAAACGGTTCTAGAAGAATTGAAAAG 58.657 33.333 5.12 0.00 36.50 2.27
6970 7734 8.215926 TCAAACGGTTCTAGAAGAATTGAAAA 57.784 30.769 5.12 0.00 36.50 2.29
6971 7735 7.795482 TCAAACGGTTCTAGAAGAATTGAAA 57.205 32.000 5.12 0.00 36.50 2.69
6972 7736 7.979444 ATCAAACGGTTCTAGAAGAATTGAA 57.021 32.000 18.86 9.12 34.88 2.69
6973 7737 7.148639 CGAATCAAACGGTTCTAGAAGAATTGA 60.149 37.037 17.94 17.94 36.50 2.57
6974 7738 6.955963 CGAATCAAACGGTTCTAGAAGAATTG 59.044 38.462 5.12 9.20 36.50 2.32
6975 7739 6.402226 GCGAATCAAACGGTTCTAGAAGAATT 60.402 38.462 5.12 0.00 36.50 2.17
6976 7740 5.063564 GCGAATCAAACGGTTCTAGAAGAAT 59.936 40.000 5.12 0.00 36.50 2.40
6977 7741 4.387862 GCGAATCAAACGGTTCTAGAAGAA 59.612 41.667 5.12 0.00 0.00 2.52
6978 7742 3.924686 GCGAATCAAACGGTTCTAGAAGA 59.075 43.478 5.12 0.00 0.00 2.87
6979 7743 3.678072 TGCGAATCAAACGGTTCTAGAAG 59.322 43.478 5.12 0.00 0.00 2.85
6980 7744 3.655486 TGCGAATCAAACGGTTCTAGAA 58.345 40.909 0.00 0.00 0.00 2.10
6981 7745 3.306917 TGCGAATCAAACGGTTCTAGA 57.693 42.857 0.00 0.00 0.00 2.43
6982 7746 3.185594 TGTTGCGAATCAAACGGTTCTAG 59.814 43.478 0.00 0.00 36.26 2.43
6983 7747 3.132160 TGTTGCGAATCAAACGGTTCTA 58.868 40.909 0.00 0.00 36.26 2.10
6984 7748 1.944024 TGTTGCGAATCAAACGGTTCT 59.056 42.857 0.00 0.00 36.26 3.01
6985 7749 2.307049 CTGTTGCGAATCAAACGGTTC 58.693 47.619 0.00 0.00 36.26 3.62
6986 7750 1.599419 GCTGTTGCGAATCAAACGGTT 60.599 47.619 6.53 0.00 36.26 4.44
6987 7751 0.040425 GCTGTTGCGAATCAAACGGT 60.040 50.000 6.53 0.00 36.26 4.83
6988 7752 2.712077 GCTGTTGCGAATCAAACGG 58.288 52.632 0.00 1.50 36.26 4.44
7003 7767 6.145556 AGGGTATCCATTTAACAGTTCGCTG 61.146 44.000 0.00 0.00 42.48 5.18
7004 7768 4.080526 AGGGTATCCATTTAACAGTTCGCT 60.081 41.667 0.00 0.00 34.83 4.93
7005 7769 4.196971 AGGGTATCCATTTAACAGTTCGC 58.803 43.478 0.00 0.00 34.83 4.70
7006 7770 6.753107 AAAGGGTATCCATTTAACAGTTCG 57.247 37.500 0.00 0.00 34.83 3.95
7007 7771 8.027189 GTGAAAAGGGTATCCATTTAACAGTTC 58.973 37.037 5.48 0.00 35.92 3.01
7008 7772 7.039293 GGTGAAAAGGGTATCCATTTAACAGTT 60.039 37.037 11.52 0.00 37.01 3.16
7009 7773 6.436218 GGTGAAAAGGGTATCCATTTAACAGT 59.564 38.462 11.52 0.00 37.01 3.55
7010 7774 6.127451 GGGTGAAAAGGGTATCCATTTAACAG 60.127 42.308 11.52 0.00 37.01 3.16
7011 7775 5.717654 GGGTGAAAAGGGTATCCATTTAACA 59.282 40.000 11.52 0.00 37.01 2.41
7012 7776 5.955959 AGGGTGAAAAGGGTATCCATTTAAC 59.044 40.000 2.01 2.01 35.40 2.01
7013 7777 6.160483 AGGGTGAAAAGGGTATCCATTTAA 57.840 37.500 0.00 0.00 34.48 1.52
7014 7778 5.630539 CGAGGGTGAAAAGGGTATCCATTTA 60.631 44.000 0.00 0.00 34.48 1.40
7015 7779 4.610333 GAGGGTGAAAAGGGTATCCATTT 58.390 43.478 0.00 0.00 36.74 2.32
7016 7780 3.371595 CGAGGGTGAAAAGGGTATCCATT 60.372 47.826 0.00 0.00 34.83 3.16
7017 7781 2.172717 CGAGGGTGAAAAGGGTATCCAT 59.827 50.000 0.00 0.00 34.83 3.41
7018 7782 1.557832 CGAGGGTGAAAAGGGTATCCA 59.442 52.381 0.00 0.00 34.83 3.41
7019 7783 1.134189 CCGAGGGTGAAAAGGGTATCC 60.134 57.143 0.00 0.00 0.00 2.59
7020 7784 1.134189 CCCGAGGGTGAAAAGGGTATC 60.134 57.143 0.00 0.00 37.36 2.24
7021 7785 0.916809 CCCGAGGGTGAAAAGGGTAT 59.083 55.000 0.00 0.00 37.36 2.73
7022 7786 1.202769 CCCCGAGGGTGAAAAGGGTA 61.203 60.000 7.48 0.00 40.44 3.69
7023 7787 2.535331 CCCCGAGGGTGAAAAGGGT 61.535 63.158 7.48 0.00 40.44 4.34
7024 7788 2.355115 CCCCGAGGGTGAAAAGGG 59.645 66.667 7.48 0.00 38.25 3.95
7043 7807 1.484653 AGCCAAAACCACTTGGGAAAC 59.515 47.619 0.00 0.00 45.21 2.78
7044 7808 1.484240 CAGCCAAAACCACTTGGGAAA 59.516 47.619 0.00 0.00 45.21 3.13
7045 7809 1.118838 CAGCCAAAACCACTTGGGAA 58.881 50.000 0.00 0.00 45.21 3.97
7046 7810 0.260230 TCAGCCAAAACCACTTGGGA 59.740 50.000 0.00 0.00 45.21 4.37
7047 7811 1.001181 CATCAGCCAAAACCACTTGGG 59.999 52.381 0.00 0.00 45.21 4.12
7049 7813 2.546373 CCACATCAGCCAAAACCACTTG 60.546 50.000 0.00 0.00 0.00 3.16
7050 7814 1.688197 CCACATCAGCCAAAACCACTT 59.312 47.619 0.00 0.00 0.00 3.16
7051 7815 1.331214 CCACATCAGCCAAAACCACT 58.669 50.000 0.00 0.00 0.00 4.00
7052 7816 0.319813 GCCACATCAGCCAAAACCAC 60.320 55.000 0.00 0.00 0.00 4.16
7053 7817 0.469705 AGCCACATCAGCCAAAACCA 60.470 50.000 0.00 0.00 0.00 3.67
7054 7818 0.037975 CAGCCACATCAGCCAAAACC 60.038 55.000 0.00 0.00 0.00 3.27
7055 7819 0.668401 GCAGCCACATCAGCCAAAAC 60.668 55.000 0.00 0.00 0.00 2.43
7056 7820 1.667151 GCAGCCACATCAGCCAAAA 59.333 52.632 0.00 0.00 0.00 2.44
7057 7821 2.277591 GGCAGCCACATCAGCCAAA 61.278 57.895 6.55 0.00 46.26 3.28
7058 7822 2.677524 GGCAGCCACATCAGCCAA 60.678 61.111 6.55 0.00 46.26 4.52
7061 7825 2.050350 ACATGGCAGCCACATCAGC 61.050 57.895 19.10 0.00 35.80 4.26
7062 7826 0.963856 ACACATGGCAGCCACATCAG 60.964 55.000 19.10 7.96 35.80 2.90
7063 7827 0.961857 GACACATGGCAGCCACATCA 60.962 55.000 19.10 0.00 35.80 3.07
7064 7828 1.660560 GGACACATGGCAGCCACATC 61.661 60.000 19.10 11.72 35.80 3.06
7065 7829 1.679977 GGACACATGGCAGCCACAT 60.680 57.895 19.10 4.53 35.80 3.21
7066 7830 2.282391 GGACACATGGCAGCCACA 60.282 61.111 19.10 0.00 35.80 4.17
7067 7831 3.434319 CGGACACATGGCAGCCAC 61.434 66.667 19.10 2.79 35.80 5.01
7071 7835 4.758251 TCGGCGGACACATGGCAG 62.758 66.667 7.21 0.00 0.00 4.85
7074 7838 4.386951 TGGTCGGCGGACACATGG 62.387 66.667 23.82 0.00 45.28 3.66
7075 7839 3.118454 GTGGTCGGCGGACACATG 61.118 66.667 23.82 0.00 45.28 3.21
7076 7840 4.388499 GGTGGTCGGCGGACACAT 62.388 66.667 26.86 0.00 45.28 3.21
7080 7844 3.763127 GATACGGTGGTCGGCGGAC 62.763 68.421 15.59 15.59 44.45 4.79
7081 7845 3.520862 GATACGGTGGTCGGCGGA 61.521 66.667 7.21 0.00 44.45 5.54
7082 7846 3.829044 TGATACGGTGGTCGGCGG 61.829 66.667 7.21 0.00 44.45 6.13
7083 7847 2.581409 GTGATACGGTGGTCGGCG 60.581 66.667 0.00 0.00 44.45 6.46
7084 7848 1.518572 CAGTGATACGGTGGTCGGC 60.519 63.158 0.00 0.00 44.45 5.54
7085 7849 1.518572 GCAGTGATACGGTGGTCGG 60.519 63.158 0.00 0.00 44.45 4.79
7086 7850 1.518572 GGCAGTGATACGGTGGTCG 60.519 63.158 0.00 0.00 45.88 4.79
7087 7851 0.178068 ATGGCAGTGATACGGTGGTC 59.822 55.000 0.00 0.00 0.00 4.02
7088 7852 0.107703 CATGGCAGTGATACGGTGGT 60.108 55.000 0.00 0.00 0.00 4.16
7089 7853 0.107703 ACATGGCAGTGATACGGTGG 60.108 55.000 0.00 0.00 0.00 4.61
7090 7854 1.290203 GACATGGCAGTGATACGGTG 58.710 55.000 0.00 0.00 0.00 4.94
7091 7855 0.179111 CGACATGGCAGTGATACGGT 60.179 55.000 0.00 0.00 0.00 4.83
7092 7856 1.490693 GCGACATGGCAGTGATACGG 61.491 60.000 0.00 0.00 0.00 4.02
7093 7857 1.490693 GGCGACATGGCAGTGATACG 61.491 60.000 0.00 0.00 44.08 3.06
7094 7858 1.490693 CGGCGACATGGCAGTGATAC 61.491 60.000 0.00 0.00 45.16 2.24
7095 7859 1.227234 CGGCGACATGGCAGTGATA 60.227 57.895 0.00 0.00 45.16 2.15
7096 7860 2.512286 CGGCGACATGGCAGTGAT 60.512 61.111 0.00 0.00 45.16 3.06
7097 7861 4.758251 CCGGCGACATGGCAGTGA 62.758 66.667 9.30 0.00 45.16 3.41
7103 7867 3.622060 AAGGAACCCGGCGACATGG 62.622 63.158 9.30 2.75 0.00 3.66
7104 7868 1.241315 AAAAGGAACCCGGCGACATG 61.241 55.000 9.30 0.00 0.00 3.21
7105 7869 0.325602 TAAAAGGAACCCGGCGACAT 59.674 50.000 9.30 0.00 0.00 3.06
7106 7870 0.603439 GTAAAAGGAACCCGGCGACA 60.603 55.000 9.30 0.00 0.00 4.35
7107 7871 0.321034 AGTAAAAGGAACCCGGCGAC 60.321 55.000 9.30 0.00 0.00 5.19
7108 7872 0.320946 CAGTAAAAGGAACCCGGCGA 60.321 55.000 9.30 0.00 0.00 5.54
7109 7873 0.604511 ACAGTAAAAGGAACCCGGCG 60.605 55.000 0.00 0.00 0.00 6.46
7110 7874 1.612676 AACAGTAAAAGGAACCCGGC 58.387 50.000 0.00 0.00 0.00 6.13
7111 7875 5.970317 ATAAAACAGTAAAAGGAACCCGG 57.030 39.130 0.00 0.00 0.00 5.73
7112 7876 7.593644 CAGAAATAAAACAGTAAAAGGAACCCG 59.406 37.037 0.00 0.00 0.00 5.28
7113 7877 7.384115 GCAGAAATAAAACAGTAAAAGGAACCC 59.616 37.037 0.00 0.00 0.00 4.11
7114 7878 7.384115 GGCAGAAATAAAACAGTAAAAGGAACC 59.616 37.037 0.00 0.00 0.00 3.62
7115 7879 7.923878 TGGCAGAAATAAAACAGTAAAAGGAAC 59.076 33.333 0.00 0.00 0.00 3.62
7116 7880 8.012957 TGGCAGAAATAAAACAGTAAAAGGAA 57.987 30.769 0.00 0.00 0.00 3.36
7117 7881 7.589958 TGGCAGAAATAAAACAGTAAAAGGA 57.410 32.000 0.00 0.00 0.00 3.36
7118 7882 8.831715 ATTGGCAGAAATAAAACAGTAAAAGG 57.168 30.769 0.00 0.00 0.00 3.11
7124 7888 8.962884 AGAAAAATTGGCAGAAATAAAACAGT 57.037 26.923 0.00 0.00 0.00 3.55
7135 7899 8.408601 GCTAGAAATGATAGAAAAATTGGCAGA 58.591 33.333 0.00 0.00 0.00 4.26
7136 7900 8.192774 TGCTAGAAATGATAGAAAAATTGGCAG 58.807 33.333 0.00 0.00 0.00 4.85
7137 7901 8.065473 TGCTAGAAATGATAGAAAAATTGGCA 57.935 30.769 0.00 0.00 0.00 4.92
7138 7902 9.538508 AATGCTAGAAATGATAGAAAAATTGGC 57.461 29.630 0.00 0.00 0.00 4.52
7214 7978 4.154375 TGAAACGACAAACACTACAGCAAA 59.846 37.500 0.00 0.00 0.00 3.68
7232 7996 3.127548 CAGCCATGTCACTACCATGAAAC 59.872 47.826 0.00 0.00 41.78 2.78
7259 8023 0.827089 TTTGGTGACATGGGTGCCAG 60.827 55.000 0.00 0.00 42.32 4.85
7317 8081 4.513692 GCAACATCAAACTACTGTACACCA 59.486 41.667 0.00 0.00 0.00 4.17
7321 8085 7.359595 TGAATTGCAACATCAAACTACTGTAC 58.640 34.615 12.92 0.00 0.00 2.90
7324 8088 7.697352 TTTGAATTGCAACATCAAACTACTG 57.303 32.000 26.37 0.00 37.95 2.74
7643 8415 5.452255 ACTTTGTACGGAGGGAGTATATCA 58.548 41.667 0.00 0.00 0.00 2.15
7693 8465 2.063979 CATGTACTCCCTCCGCCCA 61.064 63.158 0.00 0.00 0.00 5.36
7694 8466 2.822399 CATGTACTCCCTCCGCCC 59.178 66.667 0.00 0.00 0.00 6.13
7696 8468 0.530870 GAAGCATGTACTCCCTCCGC 60.531 60.000 0.00 0.00 0.00 5.54
7715 8487 5.824624 AGCATCTACATCACAAATAACCAGG 59.175 40.000 0.00 0.00 0.00 4.45
7726 8498 5.587844 ACCTTTGATCAAGCATCTACATCAC 59.412 40.000 8.41 0.00 31.92 3.06
7901 8673 3.634397 TGGATAGCTGTTTCTTGGAGG 57.366 47.619 0.00 0.00 0.00 4.30
7908 8680 3.135530 AGGACTCCATGGATAGCTGTTTC 59.864 47.826 16.63 6.15 0.00 2.78
8068 8840 7.445096 TCACTGCATAACTTCTTGAAATTCTGA 59.555 33.333 0.00 0.00 0.00 3.27
8121 8893 1.067821 GCTCTCCAGGACATTACCTCG 59.932 57.143 0.00 0.00 38.32 4.63
8132 8904 2.342179 GAGAAAAGTTCGCTCTCCAGG 58.658 52.381 0.00 0.00 31.25 4.45
8140 8912 3.565516 GAAACCATGGAGAAAAGTTCGC 58.434 45.455 21.47 0.00 34.02 4.70
8241 9014 0.512952 CAGTAGTTGCACTTCCGCAC 59.487 55.000 0.00 0.00 42.87 5.34
8329 9102 4.081031 TCACACAGATAGTCGAGGACTACT 60.081 45.833 7.58 5.24 46.06 2.57
8345 9118 0.805322 GCTCCTCGCTCATCACACAG 60.805 60.000 0.00 0.00 35.14 3.66
8353 9126 1.593787 CTTCCTTGCTCCTCGCTCA 59.406 57.895 0.00 0.00 40.11 4.26
8388 9161 3.389329 TCTTGCCCTATGGACTGATTCTC 59.611 47.826 0.00 0.00 0.00 2.87
8447 9222 2.553079 TCAACAAACCAACAACGCTC 57.447 45.000 0.00 0.00 0.00 5.03
8448 9223 2.808244 CATCAACAAACCAACAACGCT 58.192 42.857 0.00 0.00 0.00 5.07
8642 9420 2.738846 GCAGCTGATTTCTTCGAGTTCA 59.261 45.455 20.43 0.00 0.00 3.18
8759 9551 8.537223 TGAAATAGTCTAATATCGAAACAACGC 58.463 33.333 0.00 0.00 0.00 4.84
8778 9570 9.893305 ACCTCGTTAAAAAGTTGATTGAAATAG 57.107 29.630 0.00 0.00 0.00 1.73
8786 12253 7.333672 GGATGACTACCTCGTTAAAAAGTTGAT 59.666 37.037 0.00 0.00 0.00 2.57
8799 12266 1.041447 AACCCGGGATGACTACCTCG 61.041 60.000 32.02 0.00 0.00 4.63
8807 12274 0.397394 TCGATGGTAACCCGGGATGA 60.397 55.000 32.02 8.83 33.27 2.92
8812 12279 0.179056 AGCAATCGATGGTAACCCGG 60.179 55.000 0.00 0.00 38.18 5.73
8814 12281 2.143925 GCTAGCAATCGATGGTAACCC 58.856 52.381 10.63 0.00 41.23 4.11
8831 12647 1.103803 CTAGACCAACTCGCCTGCTA 58.896 55.000 0.00 0.00 0.00 3.49
8832 12648 0.900647 ACTAGACCAACTCGCCTGCT 60.901 55.000 0.00 0.00 0.00 4.24
8833 12649 0.737715 CACTAGACCAACTCGCCTGC 60.738 60.000 0.00 0.00 0.00 4.85
8834 12650 0.108615 CCACTAGACCAACTCGCCTG 60.109 60.000 0.00 0.00 0.00 4.85
8861 12760 3.130340 CCGCCAAATATAAAACACCTGCT 59.870 43.478 0.00 0.00 0.00 4.24
8924 12824 5.905331 TCTTGGACCTATGTATGTTGGATCT 59.095 40.000 0.00 0.00 0.00 2.75
8925 12825 6.174720 TCTTGGACCTATGTATGTTGGATC 57.825 41.667 0.00 0.00 0.00 3.36
8926 12826 6.386927 TCTTCTTGGACCTATGTATGTTGGAT 59.613 38.462 0.00 0.00 0.00 3.41
8927 12827 5.724370 TCTTCTTGGACCTATGTATGTTGGA 59.276 40.000 0.00 0.00 0.00 3.53
8928 12828 5.989477 TCTTCTTGGACCTATGTATGTTGG 58.011 41.667 0.00 0.00 0.00 3.77
8930 12830 6.353082 CCCTTCTTCTTGGACCTATGTATGTT 60.353 42.308 0.00 0.00 0.00 2.71
8932 12832 5.366768 TCCCTTCTTCTTGGACCTATGTATG 59.633 44.000 0.00 0.00 0.00 2.39
8933 12833 5.538877 TCCCTTCTTCTTGGACCTATGTAT 58.461 41.667 0.00 0.00 0.00 2.29
8934 12834 4.955335 TCCCTTCTTCTTGGACCTATGTA 58.045 43.478 0.00 0.00 0.00 2.29
8935 12835 3.803340 TCCCTTCTTCTTGGACCTATGT 58.197 45.455 0.00 0.00 0.00 2.29
8936 12836 4.844349 TTCCCTTCTTCTTGGACCTATG 57.156 45.455 0.00 0.00 0.00 2.23
8937 12837 6.408770 AATTTCCCTTCTTCTTGGACCTAT 57.591 37.500 0.00 0.00 0.00 2.57
8938 12838 5.860648 AATTTCCCTTCTTCTTGGACCTA 57.139 39.130 0.00 0.00 0.00 3.08
8939 12839 4.749048 AATTTCCCTTCTTCTTGGACCT 57.251 40.909 0.00 0.00 0.00 3.85
8940 12840 5.808366 AAAATTTCCCTTCTTCTTGGACC 57.192 39.130 0.00 0.00 0.00 4.46
8941 12841 7.152645 GGTAAAAATTTCCCTTCTTCTTGGAC 58.847 38.462 0.00 0.00 0.00 4.02
8942 12842 6.841755 TGGTAAAAATTTCCCTTCTTCTTGGA 59.158 34.615 0.00 0.00 0.00 3.53
8943 12843 7.061566 TGGTAAAAATTTCCCTTCTTCTTGG 57.938 36.000 0.00 0.00 0.00 3.61
8946 12846 9.374711 TGTTATGGTAAAAATTTCCCTTCTTCT 57.625 29.630 0.00 0.00 0.00 2.85
8949 12849 8.466798 CGATGTTATGGTAAAAATTTCCCTTCT 58.533 33.333 0.00 0.00 0.00 2.85
8950 12850 7.704899 CCGATGTTATGGTAAAAATTTCCCTTC 59.295 37.037 0.00 0.00 0.00 3.46
8951 12851 7.397761 TCCGATGTTATGGTAAAAATTTCCCTT 59.602 33.333 0.00 0.00 0.00 3.95
8952 12852 6.893005 TCCGATGTTATGGTAAAAATTTCCCT 59.107 34.615 0.00 0.00 0.00 4.20
8953 12853 7.102847 TCCGATGTTATGGTAAAAATTTCCC 57.897 36.000 0.00 0.00 0.00 3.97
8954 12854 7.865889 GGATCCGATGTTATGGTAAAAATTTCC 59.134 37.037 0.00 0.00 0.00 3.13
8955 12855 8.630037 AGGATCCGATGTTATGGTAAAAATTTC 58.370 33.333 5.98 0.00 0.00 2.17
8956 12856 8.533569 AGGATCCGATGTTATGGTAAAAATTT 57.466 30.769 5.98 0.00 0.00 1.82
8957 12857 8.166422 GAGGATCCGATGTTATGGTAAAAATT 57.834 34.615 5.98 0.00 0.00 1.82
8958 12858 7.745620 GAGGATCCGATGTTATGGTAAAAAT 57.254 36.000 5.98 0.00 0.00 1.82
8976 12876 9.490379 ACATCTTATATTTGTAAACGGAGGATC 57.510 33.333 0.00 0.00 0.00 3.36
8977 12877 9.490379 GACATCTTATATTTGTAAACGGAGGAT 57.510 33.333 0.00 0.00 0.00 3.24
8978 12878 8.701895 AGACATCTTATATTTGTAAACGGAGGA 58.298 33.333 0.00 0.00 0.00 3.71
8979 12879 8.888579 AGACATCTTATATTTGTAAACGGAGG 57.111 34.615 0.00 0.00 0.00 4.30
8980 12880 8.979574 GGAGACATCTTATATTTGTAAACGGAG 58.020 37.037 0.00 0.00 0.00 4.63
8981 12881 8.479689 TGGAGACATCTTATATTTGTAAACGGA 58.520 33.333 0.00 0.00 33.40 4.69
8982 12882 8.657074 TGGAGACATCTTATATTTGTAAACGG 57.343 34.615 0.00 0.00 33.40 4.44
9016 12916 8.944029 GCATTTCAGTCTGTATGCAATCTATAT 58.056 33.333 24.78 0.00 42.18 0.86
9017 12917 7.116805 CGCATTTCAGTCTGTATGCAATCTATA 59.883 37.037 26.89 0.00 42.61 1.31
9018 12918 6.073385 CGCATTTCAGTCTGTATGCAATCTAT 60.073 38.462 26.89 0.00 42.61 1.98
9019 12919 5.234972 CGCATTTCAGTCTGTATGCAATCTA 59.765 40.000 26.89 0.00 42.61 1.98
9020 12920 4.034858 CGCATTTCAGTCTGTATGCAATCT 59.965 41.667 26.89 0.00 42.61 2.40
9021 12921 4.201851 ACGCATTTCAGTCTGTATGCAATC 60.202 41.667 26.89 10.54 42.61 2.67
9022 12922 3.691118 ACGCATTTCAGTCTGTATGCAAT 59.309 39.130 26.89 18.23 42.61 3.56
9023 12923 3.073678 ACGCATTTCAGTCTGTATGCAA 58.926 40.909 26.89 5.51 42.61 4.08
9024 12924 2.416202 CACGCATTTCAGTCTGTATGCA 59.584 45.455 26.89 0.00 42.61 3.96
9025 12925 2.672874 TCACGCATTTCAGTCTGTATGC 59.327 45.455 22.10 22.10 39.88 3.14
9026 12926 4.389992 AGTTCACGCATTTCAGTCTGTATG 59.610 41.667 0.00 6.55 0.00 2.39
9027 12927 4.569943 AGTTCACGCATTTCAGTCTGTAT 58.430 39.130 0.00 0.00 0.00 2.29
9028 12928 3.990092 AGTTCACGCATTTCAGTCTGTA 58.010 40.909 0.00 0.00 0.00 2.74
9029 12929 2.838736 AGTTCACGCATTTCAGTCTGT 58.161 42.857 0.00 0.00 0.00 3.41
9030 12930 4.211164 TGTTAGTTCACGCATTTCAGTCTG 59.789 41.667 0.00 0.00 0.00 3.51
9031 12931 4.211374 GTGTTAGTTCACGCATTTCAGTCT 59.789 41.667 0.00 0.00 0.00 3.24
9032 12932 4.025229 TGTGTTAGTTCACGCATTTCAGTC 60.025 41.667 0.00 0.00 40.74 3.51
9033 12933 3.874543 TGTGTTAGTTCACGCATTTCAGT 59.125 39.130 0.00 0.00 40.74 3.41
9034 12934 4.024893 AGTGTGTTAGTTCACGCATTTCAG 60.025 41.667 11.81 0.00 46.99 3.02
9035 12935 3.874543 AGTGTGTTAGTTCACGCATTTCA 59.125 39.130 11.81 0.00 46.99 2.69
9036 12936 4.468095 AGTGTGTTAGTTCACGCATTTC 57.532 40.909 11.81 0.00 46.99 2.17
9037 12937 5.176958 GTCTAGTGTGTTAGTTCACGCATTT 59.823 40.000 11.81 0.00 46.99 2.32
9038 12938 4.684703 GTCTAGTGTGTTAGTTCACGCATT 59.315 41.667 11.81 0.00 46.99 3.56
9039 12939 4.235360 GTCTAGTGTGTTAGTTCACGCAT 58.765 43.478 11.81 1.97 46.99 4.73
9040 12940 3.635331 GTCTAGTGTGTTAGTTCACGCA 58.365 45.455 11.81 0.00 46.99 5.24
9041 12941 2.655474 CGTCTAGTGTGTTAGTTCACGC 59.345 50.000 2.73 2.73 45.57 5.34
9042 12942 3.881795 ACGTCTAGTGTGTTAGTTCACG 58.118 45.455 0.00 0.00 40.74 4.35
9043 12943 5.731723 CGATACGTCTAGTGTGTTAGTTCAC 59.268 44.000 0.00 0.00 38.63 3.18
9044 12944 5.639082 TCGATACGTCTAGTGTGTTAGTTCA 59.361 40.000 0.00 0.00 0.00 3.18
9045 12945 6.099579 TCGATACGTCTAGTGTGTTAGTTC 57.900 41.667 0.00 0.00 0.00 3.01
9046 12946 6.093219 ACATCGATACGTCTAGTGTGTTAGTT 59.907 38.462 0.00 0.00 0.00 2.24
9047 12947 5.583854 ACATCGATACGTCTAGTGTGTTAGT 59.416 40.000 0.00 0.00 0.00 2.24
9048 12948 6.045698 ACATCGATACGTCTAGTGTGTTAG 57.954 41.667 0.00 0.00 0.00 2.34
9049 12949 7.538303 TTACATCGATACGTCTAGTGTGTTA 57.462 36.000 0.00 0.00 0.00 2.41
9050 12950 4.959596 ACATCGATACGTCTAGTGTGTT 57.040 40.909 0.00 0.00 0.00 3.32
9051 12951 6.426980 TTTACATCGATACGTCTAGTGTGT 57.573 37.500 0.00 0.00 0.00 3.72
9052 12952 6.744082 TGTTTTACATCGATACGTCTAGTGTG 59.256 38.462 0.00 0.00 0.00 3.82
9053 12953 6.744537 GTGTTTTACATCGATACGTCTAGTGT 59.255 38.462 0.00 0.00 0.00 3.55
9054 12954 6.744082 TGTGTTTTACATCGATACGTCTAGTG 59.256 38.462 0.00 0.00 33.42 2.74
9055 12955 6.744537 GTGTGTTTTACATCGATACGTCTAGT 59.255 38.462 0.00 0.00 42.24 2.57
9056 12956 6.744082 TGTGTGTTTTACATCGATACGTCTAG 59.256 38.462 0.00 0.00 42.24 2.43
9057 12957 6.524239 GTGTGTGTTTTACATCGATACGTCTA 59.476 38.462 0.00 0.00 42.24 2.59
9058 12958 5.344128 GTGTGTGTTTTACATCGATACGTCT 59.656 40.000 0.00 0.00 42.24 4.18
9059 12959 5.117440 TGTGTGTGTTTTACATCGATACGTC 59.883 40.000 0.00 0.00 42.24 4.34
9060 12960 4.983538 TGTGTGTGTTTTACATCGATACGT 59.016 37.500 0.00 0.00 42.24 3.57
9061 12961 5.107798 TGTGTGTGTGTTTTACATCGATACG 60.108 40.000 0.00 0.00 42.24 3.06
9062 12962 6.068931 GTGTGTGTGTGTTTTACATCGATAC 58.931 40.000 0.00 0.00 42.24 2.24
9063 12963 5.986741 AGTGTGTGTGTGTTTTACATCGATA 59.013 36.000 0.00 0.00 42.24 2.92
9064 12964 4.814234 AGTGTGTGTGTGTTTTACATCGAT 59.186 37.500 0.00 0.00 42.24 3.59
9065 12965 4.185394 AGTGTGTGTGTGTTTTACATCGA 58.815 39.130 0.00 0.00 42.24 3.59
9066 12966 4.530094 AGTGTGTGTGTGTTTTACATCG 57.470 40.909 0.00 0.00 42.24 3.84
9067 12967 6.409761 CGTTTAGTGTGTGTGTGTTTTACATC 59.590 38.462 0.00 0.00 42.24 3.06
9068 12968 6.128227 ACGTTTAGTGTGTGTGTGTTTTACAT 60.128 34.615 0.00 0.00 42.24 2.29
9069 12969 5.178996 ACGTTTAGTGTGTGTGTGTTTTACA 59.821 36.000 0.00 0.00 36.82 2.41
9070 12970 5.620467 ACGTTTAGTGTGTGTGTGTTTTAC 58.380 37.500 0.00 0.00 0.00 2.01
9071 12971 5.859521 ACGTTTAGTGTGTGTGTGTTTTA 57.140 34.783 0.00 0.00 0.00 1.52
9072 12972 4.752661 ACGTTTAGTGTGTGTGTGTTTT 57.247 36.364 0.00 0.00 0.00 2.43
9073 12973 5.813672 AGATACGTTTAGTGTGTGTGTGTTT 59.186 36.000 0.00 0.00 0.00 2.83
9074 12974 5.353938 AGATACGTTTAGTGTGTGTGTGTT 58.646 37.500 0.00 0.00 0.00 3.32
9075 12975 4.940463 AGATACGTTTAGTGTGTGTGTGT 58.060 39.130 0.00 0.00 0.00 3.72
9076 12976 8.677871 TTATAGATACGTTTAGTGTGTGTGTG 57.322 34.615 0.00 0.00 0.00 3.82
9077 12977 9.865321 ATTTATAGATACGTTTAGTGTGTGTGT 57.135 29.630 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.