Multiple sequence alignment - TraesCS7D01G378000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G378000 chr7D 100.000 3113 0 0 1 3113 489163552 489160440 0.000000e+00 5749
1 TraesCS7D01G378000 chr7D 89.810 1786 122 27 639 2397 33807375 33809127 0.000000e+00 2235
2 TraesCS7D01G378000 chr7D 95.094 1325 38 12 1056 2372 425723994 425725299 0.000000e+00 2061
3 TraesCS7D01G378000 chr7D 98.871 620 7 0 391 1010 425723375 425723994 0.000000e+00 1107
4 TraesCS7D01G378000 chr3D 96.416 2037 33 11 391 2407 508191458 508189442 0.000000e+00 3321
5 TraesCS7D01G378000 chr4D 96.300 2027 32 8 391 2398 471493432 471495434 0.000000e+00 3288
6 TraesCS7D01G378000 chr6B 94.205 2019 80 10 396 2393 184169704 184171706 0.000000e+00 3046
7 TraesCS7D01G378000 chr2D 93.888 2045 58 22 396 2395 33330210 33328188 0.000000e+00 3022
8 TraesCS7D01G378000 chr1B 91.429 2030 125 10 396 2397 11630724 11632732 0.000000e+00 2739
9 TraesCS7D01G378000 chr6A 90.467 2014 141 23 400 2394 119336774 119334793 0.000000e+00 2608
10 TraesCS7D01G378000 chr6A 84.161 423 59 6 403 823 184710744 184711160 1.340000e-108 403
11 TraesCS7D01G378000 chr5B 93.273 1650 75 7 501 2131 429803177 429804809 0.000000e+00 2399
12 TraesCS7D01G378000 chr5D 94.834 1510 41 8 904 2394 376685282 376686773 0.000000e+00 2322
13 TraesCS7D01G378000 chr2B 94.370 1261 52 5 399 1656 503979091 503977847 0.000000e+00 1917
14 TraesCS7D01G378000 chr6D 95.507 1046 25 5 1373 2398 428443242 428444285 0.000000e+00 1652
15 TraesCS7D01G378000 chr7B 94.518 912 33 3 1499 2393 23262382 23263293 0.000000e+00 1391
16 TraesCS7D01G378000 chr7B 86.486 259 24 5 2857 3113 517922272 517922023 1.100000e-69 274
17 TraesCS7D01G378000 chr7B 80.060 331 32 19 2533 2863 517922612 517922316 6.760000e-52 215
18 TraesCS7D01G378000 chr7B 90.323 124 11 1 2884 3006 517851136 517851259 8.930000e-36 161
19 TraesCS7D01G378000 chr3B 94.267 907 36 3 1505 2395 144196921 144197827 0.000000e+00 1373
20 TraesCS7D01G378000 chr7A 82.523 555 65 17 2567 3113 556357717 556357187 2.830000e-125 459
21 TraesCS7D01G378000 chr7A 73.879 513 81 37 2536 3029 556481331 556480853 4.160000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G378000 chr7D 489160440 489163552 3112 True 5749.0 5749 100.0000 1 3113 1 chr7D.!!$R1 3112
1 TraesCS7D01G378000 chr7D 33807375 33809127 1752 False 2235.0 2235 89.8100 639 2397 1 chr7D.!!$F1 1758
2 TraesCS7D01G378000 chr7D 425723375 425725299 1924 False 1584.0 2061 96.9825 391 2372 2 chr7D.!!$F2 1981
3 TraesCS7D01G378000 chr3D 508189442 508191458 2016 True 3321.0 3321 96.4160 391 2407 1 chr3D.!!$R1 2016
4 TraesCS7D01G378000 chr4D 471493432 471495434 2002 False 3288.0 3288 96.3000 391 2398 1 chr4D.!!$F1 2007
5 TraesCS7D01G378000 chr6B 184169704 184171706 2002 False 3046.0 3046 94.2050 396 2393 1 chr6B.!!$F1 1997
6 TraesCS7D01G378000 chr2D 33328188 33330210 2022 True 3022.0 3022 93.8880 396 2395 1 chr2D.!!$R1 1999
7 TraesCS7D01G378000 chr1B 11630724 11632732 2008 False 2739.0 2739 91.4290 396 2397 1 chr1B.!!$F1 2001
8 TraesCS7D01G378000 chr6A 119334793 119336774 1981 True 2608.0 2608 90.4670 400 2394 1 chr6A.!!$R1 1994
9 TraesCS7D01G378000 chr5B 429803177 429804809 1632 False 2399.0 2399 93.2730 501 2131 1 chr5B.!!$F1 1630
10 TraesCS7D01G378000 chr5D 376685282 376686773 1491 False 2322.0 2322 94.8340 904 2394 1 chr5D.!!$F1 1490
11 TraesCS7D01G378000 chr2B 503977847 503979091 1244 True 1917.0 1917 94.3700 399 1656 1 chr2B.!!$R1 1257
12 TraesCS7D01G378000 chr6D 428443242 428444285 1043 False 1652.0 1652 95.5070 1373 2398 1 chr6D.!!$F1 1025
13 TraesCS7D01G378000 chr7B 23262382 23263293 911 False 1391.0 1391 94.5180 1499 2393 1 chr7B.!!$F1 894
14 TraesCS7D01G378000 chr7B 517922023 517922612 589 True 244.5 274 83.2730 2533 3113 2 chr7B.!!$R1 580
15 TraesCS7D01G378000 chr3B 144196921 144197827 906 False 1373.0 1373 94.2670 1505 2395 1 chr3B.!!$F1 890
16 TraesCS7D01G378000 chr7A 556357187 556357717 530 True 459.0 459 82.5230 2567 3113 1 chr7A.!!$R1 546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
215 216 0.033920 ATGTCGCAGTCTGAGCAACA 59.966 50.0 3.32 2.23 0.0 3.33 F
346 347 0.037790 AGTCAGCTTCTTCACCTCGC 60.038 55.0 0.00 0.00 0.0 5.03 F
1051 1080 0.038166 GTTGCCTCTGTCAATGGGGA 59.962 55.0 0.00 0.00 0.0 4.81 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1052 1081 0.736325 GTCGTCCCCATTGACAGTCG 60.736 60.000 0.0 0.0 34.88 4.18 R
1239 1278 1.955778 CAACCCTCATTTGTGTCTGCA 59.044 47.619 0.0 0.0 0.00 4.41 R
2722 2808 0.179062 ATCTGCCGCTTCCATCTGAC 60.179 55.000 0.0 0.0 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.377856 GGGAAGAACAGGCCTCAGC 60.378 63.158 0.00 0.00 38.76 4.26
28 29 4.852962 GCCTCAGCCTCACTCATC 57.147 61.111 0.00 0.00 0.00 2.92
29 30 1.903294 GCCTCAGCCTCACTCATCA 59.097 57.895 0.00 0.00 0.00 3.07
30 31 0.179078 GCCTCAGCCTCACTCATCAG 60.179 60.000 0.00 0.00 0.00 2.90
31 32 0.464870 CCTCAGCCTCACTCATCAGG 59.535 60.000 0.00 0.00 0.00 3.86
32 33 1.193323 CTCAGCCTCACTCATCAGGT 58.807 55.000 0.00 0.00 31.65 4.00
33 34 1.136695 CTCAGCCTCACTCATCAGGTC 59.863 57.143 0.00 0.00 31.65 3.85
34 35 1.193323 CAGCCTCACTCATCAGGTCT 58.807 55.000 0.00 0.00 31.65 3.85
35 36 1.136695 CAGCCTCACTCATCAGGTCTC 59.863 57.143 0.00 0.00 31.65 3.36
36 37 1.006998 AGCCTCACTCATCAGGTCTCT 59.993 52.381 0.00 0.00 31.65 3.10
37 38 1.408702 GCCTCACTCATCAGGTCTCTC 59.591 57.143 0.00 0.00 31.65 3.20
38 39 2.031120 CCTCACTCATCAGGTCTCTCC 58.969 57.143 0.00 0.00 0.00 3.71
39 40 2.031120 CTCACTCATCAGGTCTCTCCC 58.969 57.143 0.00 0.00 36.75 4.30
40 41 1.643286 TCACTCATCAGGTCTCTCCCT 59.357 52.381 0.00 0.00 36.75 4.20
41 42 2.031120 CACTCATCAGGTCTCTCCCTC 58.969 57.143 0.00 0.00 36.75 4.30
42 43 1.929494 ACTCATCAGGTCTCTCCCTCT 59.071 52.381 0.00 0.00 36.75 3.69
43 44 2.091885 ACTCATCAGGTCTCTCCCTCTC 60.092 54.545 0.00 0.00 36.75 3.20
44 45 1.216678 TCATCAGGTCTCTCCCTCTCC 59.783 57.143 0.00 0.00 36.75 3.71
45 46 0.560688 ATCAGGTCTCTCCCTCTCCC 59.439 60.000 0.00 0.00 36.75 4.30
46 47 0.553862 TCAGGTCTCTCCCTCTCCCT 60.554 60.000 0.00 0.00 36.75 4.20
47 48 0.106217 CAGGTCTCTCCCTCTCCCTC 60.106 65.000 0.00 0.00 36.75 4.30
48 49 0.254107 AGGTCTCTCCCTCTCCCTCT 60.254 60.000 0.00 0.00 36.75 3.69
49 50 0.185175 GGTCTCTCCCTCTCCCTCTC 59.815 65.000 0.00 0.00 0.00 3.20
50 51 1.222567 GTCTCTCCCTCTCCCTCTCT 58.777 60.000 0.00 0.00 0.00 3.10
51 52 1.143073 GTCTCTCCCTCTCCCTCTCTC 59.857 61.905 0.00 0.00 0.00 3.20
52 53 1.010793 TCTCTCCCTCTCCCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
53 54 1.421646 CTCTCCCTCTCCCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
54 55 1.010793 TCTCCCTCTCCCTCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
55 56 1.421646 CTCCCTCTCCCTCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
56 57 1.221635 CCCTCTCCCTCTCTCTCTCA 58.778 60.000 0.00 0.00 0.00 3.27
57 58 1.568597 CCCTCTCCCTCTCTCTCTCAA 59.431 57.143 0.00 0.00 0.00 3.02
58 59 2.177669 CCCTCTCCCTCTCTCTCTCAAT 59.822 54.545 0.00 0.00 0.00 2.57
59 60 3.374098 CCCTCTCCCTCTCTCTCTCAATT 60.374 52.174 0.00 0.00 0.00 2.32
60 61 4.289245 CCTCTCCCTCTCTCTCTCAATTT 58.711 47.826 0.00 0.00 0.00 1.82
61 62 4.099881 CCTCTCCCTCTCTCTCTCAATTTG 59.900 50.000 0.00 0.00 0.00 2.32
62 63 4.682563 TCTCCCTCTCTCTCTCAATTTGT 58.317 43.478 0.00 0.00 0.00 2.83
63 64 5.090139 TCTCCCTCTCTCTCTCAATTTGTT 58.910 41.667 0.00 0.00 0.00 2.83
64 65 5.545723 TCTCCCTCTCTCTCTCAATTTGTTT 59.454 40.000 0.00 0.00 0.00 2.83
65 66 5.555017 TCCCTCTCTCTCTCAATTTGTTTG 58.445 41.667 0.00 0.00 36.61 2.93
66 67 5.307976 TCCCTCTCTCTCTCAATTTGTTTGA 59.692 40.000 0.00 0.00 42.09 2.69
67 68 6.000219 CCCTCTCTCTCTCAATTTGTTTGAA 59.000 40.000 0.00 0.00 43.64 2.69
68 69 6.488006 CCCTCTCTCTCTCAATTTGTTTGAAA 59.512 38.462 0.00 0.00 43.64 2.69
69 70 7.013655 CCCTCTCTCTCTCAATTTGTTTGAAAA 59.986 37.037 0.00 0.00 43.64 2.29
70 71 8.574737 CCTCTCTCTCTCAATTTGTTTGAAAAT 58.425 33.333 0.00 0.00 43.64 1.82
71 72 9.962783 CTCTCTCTCTCAATTTGTTTGAAAATT 57.037 29.630 0.00 0.00 43.64 1.82
74 75 8.819974 TCTCTCTCAATTTGTTTGAAAATTTGC 58.180 29.630 0.00 0.00 43.64 3.68
75 76 8.721019 TCTCTCAATTTGTTTGAAAATTTGCT 57.279 26.923 0.00 0.00 43.64 3.91
76 77 9.165035 TCTCTCAATTTGTTTGAAAATTTGCTT 57.835 25.926 0.00 0.00 43.64 3.91
79 80 9.437045 CTCAATTTGTTTGAAAATTTGCTTACC 57.563 29.630 0.00 0.00 43.64 2.85
80 81 9.171877 TCAATTTGTTTGAAAATTTGCTTACCT 57.828 25.926 0.00 0.00 41.38 3.08
81 82 9.786105 CAATTTGTTTGAAAATTTGCTTACCTT 57.214 25.926 0.00 0.00 37.59 3.50
83 84 9.786105 ATTTGTTTGAAAATTTGCTTACCTTTG 57.214 25.926 0.00 0.00 0.00 2.77
84 85 7.913674 TGTTTGAAAATTTGCTTACCTTTGT 57.086 28.000 0.00 0.00 0.00 2.83
85 86 7.969314 TGTTTGAAAATTTGCTTACCTTTGTC 58.031 30.769 0.00 0.00 0.00 3.18
86 87 7.821846 TGTTTGAAAATTTGCTTACCTTTGTCT 59.178 29.630 0.00 0.00 0.00 3.41
87 88 8.328146 GTTTGAAAATTTGCTTACCTTTGTCTC 58.672 33.333 0.00 0.00 0.00 3.36
88 89 6.205784 TGAAAATTTGCTTACCTTTGTCTCG 58.794 36.000 0.00 0.00 0.00 4.04
89 90 3.831715 ATTTGCTTACCTTTGTCTCGC 57.168 42.857 0.00 0.00 0.00 5.03
90 91 1.519408 TTGCTTACCTTTGTCTCGCC 58.481 50.000 0.00 0.00 0.00 5.54
91 92 0.394938 TGCTTACCTTTGTCTCGCCA 59.605 50.000 0.00 0.00 0.00 5.69
92 93 1.079503 GCTTACCTTTGTCTCGCCAG 58.920 55.000 0.00 0.00 0.00 4.85
93 94 1.608283 GCTTACCTTTGTCTCGCCAGT 60.608 52.381 0.00 0.00 0.00 4.00
94 95 2.069273 CTTACCTTTGTCTCGCCAGTG 58.931 52.381 0.00 0.00 0.00 3.66
95 96 0.320374 TACCTTTGTCTCGCCAGTGG 59.680 55.000 4.20 4.20 0.00 4.00
96 97 1.071471 CCTTTGTCTCGCCAGTGGT 59.929 57.895 11.74 0.00 0.00 4.16
97 98 0.535102 CCTTTGTCTCGCCAGTGGTT 60.535 55.000 11.74 0.00 0.00 3.67
98 99 1.308998 CTTTGTCTCGCCAGTGGTTT 58.691 50.000 11.74 0.00 0.00 3.27
99 100 1.676006 CTTTGTCTCGCCAGTGGTTTT 59.324 47.619 11.74 0.00 0.00 2.43
100 101 1.757682 TTGTCTCGCCAGTGGTTTTT 58.242 45.000 11.74 0.00 0.00 1.94
101 102 1.305201 TGTCTCGCCAGTGGTTTTTC 58.695 50.000 11.74 0.16 0.00 2.29
102 103 1.134220 TGTCTCGCCAGTGGTTTTTCT 60.134 47.619 11.74 0.00 0.00 2.52
103 104 1.531578 GTCTCGCCAGTGGTTTTTCTC 59.468 52.381 11.74 0.00 0.00 2.87
104 105 1.140052 TCTCGCCAGTGGTTTTTCTCA 59.860 47.619 11.74 0.00 0.00 3.27
105 106 1.264288 CTCGCCAGTGGTTTTTCTCAC 59.736 52.381 11.74 0.00 0.00 3.51
106 107 0.041312 CGCCAGTGGTTTTTCTCACG 60.041 55.000 11.74 0.00 38.77 4.35
107 108 0.310854 GCCAGTGGTTTTTCTCACGG 59.689 55.000 11.74 0.00 38.77 4.94
108 109 1.961793 CCAGTGGTTTTTCTCACGGA 58.038 50.000 0.00 0.00 38.77 4.69
109 110 2.294074 CCAGTGGTTTTTCTCACGGAA 58.706 47.619 0.00 0.00 38.77 4.30
110 111 2.685897 CCAGTGGTTTTTCTCACGGAAA 59.314 45.455 0.00 0.00 41.58 3.13
111 112 3.317993 CCAGTGGTTTTTCTCACGGAAAT 59.682 43.478 0.00 0.00 42.63 2.17
112 113 4.290155 CAGTGGTTTTTCTCACGGAAATG 58.710 43.478 0.00 0.00 42.63 2.32
113 114 4.036262 CAGTGGTTTTTCTCACGGAAATGA 59.964 41.667 0.00 0.00 42.63 2.57
114 115 4.036380 AGTGGTTTTTCTCACGGAAATGAC 59.964 41.667 0.00 0.00 42.63 3.06
115 116 4.036380 GTGGTTTTTCTCACGGAAATGACT 59.964 41.667 0.00 0.00 42.63 3.41
116 117 4.274950 TGGTTTTTCTCACGGAAATGACTC 59.725 41.667 0.00 0.00 42.63 3.36
117 118 4.274950 GGTTTTTCTCACGGAAATGACTCA 59.725 41.667 0.00 0.00 42.63 3.41
118 119 5.220970 GGTTTTTCTCACGGAAATGACTCAA 60.221 40.000 0.00 0.00 42.63 3.02
119 120 6.262601 GTTTTTCTCACGGAAATGACTCAAA 58.737 36.000 0.00 0.00 42.63 2.69
120 121 6.443934 TTTTCTCACGGAAATGACTCAAAA 57.556 33.333 0.00 0.00 42.63 2.44
121 122 6.633500 TTTCTCACGGAAATGACTCAAAAT 57.367 33.333 0.00 0.00 38.81 1.82
122 123 5.862924 TCTCACGGAAATGACTCAAAATC 57.137 39.130 0.00 0.00 0.00 2.17
123 124 4.388773 TCTCACGGAAATGACTCAAAATCG 59.611 41.667 0.00 0.00 0.00 3.34
124 125 4.311606 TCACGGAAATGACTCAAAATCGA 58.688 39.130 0.00 0.00 0.00 3.59
125 126 4.388773 TCACGGAAATGACTCAAAATCGAG 59.611 41.667 0.00 0.00 39.05 4.04
126 127 3.125316 ACGGAAATGACTCAAAATCGAGC 59.875 43.478 0.00 0.00 36.42 5.03
127 128 3.372206 CGGAAATGACTCAAAATCGAGCT 59.628 43.478 0.00 0.00 36.42 4.09
128 129 4.142816 CGGAAATGACTCAAAATCGAGCTT 60.143 41.667 0.00 0.00 36.42 3.74
129 130 5.327891 GGAAATGACTCAAAATCGAGCTTC 58.672 41.667 0.00 0.00 36.42 3.86
130 131 4.590400 AATGACTCAAAATCGAGCTTCG 57.410 40.909 0.00 0.00 42.10 3.79
131 132 1.726791 TGACTCAAAATCGAGCTTCGC 59.273 47.619 0.00 0.00 40.21 4.70
132 133 1.996191 GACTCAAAATCGAGCTTCGCT 59.004 47.619 0.00 0.00 43.88 4.93
140 141 3.184683 GAGCTTCGCTCGGCACAG 61.185 66.667 0.00 0.00 45.85 3.66
141 142 3.633094 GAGCTTCGCTCGGCACAGA 62.633 63.158 0.00 0.00 45.85 3.41
142 143 2.738521 GCTTCGCTCGGCACAGAA 60.739 61.111 0.00 0.00 0.00 3.02
143 144 3.016474 GCTTCGCTCGGCACAGAAC 62.016 63.158 0.00 0.00 0.00 3.01
144 145 1.373497 CTTCGCTCGGCACAGAACT 60.373 57.895 0.00 0.00 0.00 3.01
145 146 1.621301 CTTCGCTCGGCACAGAACTG 61.621 60.000 0.00 0.00 0.00 3.16
146 147 2.356313 CGCTCGGCACAGAACTGT 60.356 61.111 1.32 1.32 46.17 3.55
147 148 1.956170 CGCTCGGCACAGAACTGTT 60.956 57.895 4.63 0.00 42.83 3.16
148 149 1.571460 GCTCGGCACAGAACTGTTG 59.429 57.895 4.63 3.04 42.83 3.33
149 150 1.160329 GCTCGGCACAGAACTGTTGT 61.160 55.000 4.63 0.00 42.83 3.32
150 151 1.299541 CTCGGCACAGAACTGTTGTT 58.700 50.000 4.63 0.00 42.83 2.83
151 152 1.003545 CTCGGCACAGAACTGTTGTTG 60.004 52.381 4.63 0.00 42.83 3.33
152 153 0.592247 CGGCACAGAACTGTTGTTGC 60.592 55.000 4.63 6.99 42.83 4.17
153 154 0.455410 GGCACAGAACTGTTGTTGCA 59.545 50.000 18.68 0.00 42.83 4.08
154 155 1.067516 GGCACAGAACTGTTGTTGCAT 59.932 47.619 18.68 0.00 42.83 3.96
155 156 2.481795 GGCACAGAACTGTTGTTGCATT 60.482 45.455 18.68 0.00 42.83 3.56
156 157 2.536803 GCACAGAACTGTTGTTGCATTG 59.463 45.455 14.90 4.36 42.83 2.82
157 158 2.536803 CACAGAACTGTTGTTGCATTGC 59.463 45.455 4.63 0.46 42.83 3.56
158 159 2.166050 ACAGAACTGTTGTTGCATTGCA 59.834 40.909 7.38 7.38 41.83 4.08
159 160 3.181473 ACAGAACTGTTGTTGCATTGCAT 60.181 39.130 12.95 0.00 41.83 3.96
160 161 4.037803 ACAGAACTGTTGTTGCATTGCATA 59.962 37.500 12.95 1.96 41.83 3.14
161 162 4.983538 CAGAACTGTTGTTGCATTGCATAA 59.016 37.500 12.95 8.34 38.76 1.90
162 163 4.984161 AGAACTGTTGTTGCATTGCATAAC 59.016 37.500 22.38 22.38 38.76 1.89
163 164 4.319139 ACTGTTGTTGCATTGCATAACA 57.681 36.364 26.56 26.56 40.71 2.41
164 165 4.691175 ACTGTTGTTGCATTGCATAACAA 58.309 34.783 27.37 24.07 41.58 2.83
165 166 5.759273 AACTGTTGTTGCATTGCATAACAAT 59.241 32.000 27.37 21.18 40.03 2.71
166 167 6.927936 AACTGTTGTTGCATTGCATAACAATA 59.072 30.769 27.37 23.23 40.03 1.90
167 168 7.603404 AACTGTTGTTGCATTGCATAACAATAT 59.397 29.630 27.37 18.99 40.03 1.28
179 180 6.563422 TGCATAACAATATGAACCTGAAAGC 58.437 36.000 0.19 0.00 41.25 3.51
180 181 5.979517 GCATAACAATATGAACCTGAAAGCC 59.020 40.000 0.19 0.00 41.25 4.35
181 182 6.507023 CATAACAATATGAACCTGAAAGCCC 58.493 40.000 0.00 0.00 41.25 5.19
182 183 4.046286 ACAATATGAACCTGAAAGCCCA 57.954 40.909 0.00 0.00 0.00 5.36
183 184 4.019174 ACAATATGAACCTGAAAGCCCAG 58.981 43.478 0.00 0.00 0.00 4.45
188 189 3.690745 CCTGAAAGCCCAGGCAAG 58.309 61.111 12.03 2.82 46.16 4.01
189 190 1.075482 CCTGAAAGCCCAGGCAAGA 59.925 57.895 12.03 0.00 46.16 3.02
190 191 0.964358 CCTGAAAGCCCAGGCAAGAG 60.964 60.000 12.03 1.02 46.16 2.85
191 192 0.037303 CTGAAAGCCCAGGCAAGAGA 59.963 55.000 12.03 0.00 44.88 3.10
192 193 0.700564 TGAAAGCCCAGGCAAGAGAT 59.299 50.000 12.03 0.00 44.88 2.75
193 194 1.340405 TGAAAGCCCAGGCAAGAGATC 60.340 52.381 12.03 0.53 44.88 2.75
194 195 0.393537 AAAGCCCAGGCAAGAGATCG 60.394 55.000 12.03 0.00 44.88 3.69
195 196 2.883267 AAGCCCAGGCAAGAGATCGC 62.883 60.000 12.03 0.00 44.88 4.58
196 197 2.586245 CCCAGGCAAGAGATCGCA 59.414 61.111 0.00 0.00 0.00 5.10
197 198 1.147824 CCCAGGCAAGAGATCGCAT 59.852 57.895 0.00 0.00 0.00 4.73
198 199 1.164662 CCCAGGCAAGAGATCGCATG 61.165 60.000 0.00 0.00 39.53 4.06
199 200 0.463295 CCAGGCAAGAGATCGCATGT 60.463 55.000 3.66 0.00 38.21 3.21
200 201 0.935898 CAGGCAAGAGATCGCATGTC 59.064 55.000 0.00 0.00 35.32 3.06
201 202 0.529337 AGGCAAGAGATCGCATGTCG 60.529 55.000 3.66 0.00 40.15 4.35
202 203 1.275066 GCAAGAGATCGCATGTCGC 59.725 57.895 3.66 0.00 38.27 5.19
203 204 1.423721 GCAAGAGATCGCATGTCGCA 61.424 55.000 3.66 0.00 42.60 5.10
204 205 0.575859 CAAGAGATCGCATGTCGCAG 59.424 55.000 0.00 0.00 42.60 5.18
205 206 0.174389 AAGAGATCGCATGTCGCAGT 59.826 50.000 0.00 0.00 42.60 4.40
206 207 0.248825 AGAGATCGCATGTCGCAGTC 60.249 55.000 0.00 3.97 42.60 3.51
207 208 0.248825 GAGATCGCATGTCGCAGTCT 60.249 55.000 4.90 7.70 42.60 3.24
208 209 0.527169 AGATCGCATGTCGCAGTCTG 60.527 55.000 0.00 0.00 42.60 3.51
209 210 0.526310 GATCGCATGTCGCAGTCTGA 60.526 55.000 3.32 0.00 42.60 3.27
210 211 0.527169 ATCGCATGTCGCAGTCTGAG 60.527 55.000 3.32 0.00 42.60 3.35
211 212 2.796425 CGCATGTCGCAGTCTGAGC 61.796 63.158 3.32 0.00 42.60 4.26
212 213 1.739196 GCATGTCGCAGTCTGAGCA 60.739 57.895 3.32 3.70 41.79 4.26
213 214 1.293963 GCATGTCGCAGTCTGAGCAA 61.294 55.000 3.32 0.00 41.79 3.91
214 215 0.441533 CATGTCGCAGTCTGAGCAAC 59.558 55.000 3.32 0.00 0.00 4.17
215 216 0.033920 ATGTCGCAGTCTGAGCAACA 59.966 50.000 3.32 2.23 0.00 3.33
216 217 0.598419 TGTCGCAGTCTGAGCAACAG 60.598 55.000 3.32 4.84 46.97 3.16
217 218 1.005748 TCGCAGTCTGAGCAACAGG 60.006 57.895 3.32 0.00 45.76 4.00
218 219 1.301244 CGCAGTCTGAGCAACAGGT 60.301 57.895 3.32 0.00 45.76 4.00
219 220 0.882042 CGCAGTCTGAGCAACAGGTT 60.882 55.000 3.32 0.00 45.76 3.50
220 221 0.590195 GCAGTCTGAGCAACAGGTTG 59.410 55.000 3.32 7.77 45.76 3.77
221 222 1.811558 GCAGTCTGAGCAACAGGTTGA 60.812 52.381 15.88 0.00 45.76 3.18
222 223 2.775890 CAGTCTGAGCAACAGGTTGAT 58.224 47.619 15.88 9.58 45.76 2.57
226 227 2.543578 GAGCAACAGGTTGATCGCA 58.456 52.632 15.88 0.00 44.44 5.10
227 228 0.166814 GAGCAACAGGTTGATCGCAC 59.833 55.000 15.88 0.00 44.44 5.34
228 229 1.154413 GCAACAGGTTGATCGCACG 60.154 57.895 15.88 0.00 42.93 5.34
229 230 1.841663 GCAACAGGTTGATCGCACGT 61.842 55.000 15.88 0.00 42.93 4.49
230 231 0.163788 CAACAGGTTGATCGCACGTC 59.836 55.000 6.29 0.00 42.93 4.34
231 232 1.282248 AACAGGTTGATCGCACGTCG 61.282 55.000 0.00 0.00 40.15 5.12
232 233 2.809601 AGGTTGATCGCACGTCGC 60.810 61.111 0.00 0.00 38.27 5.19
233 234 3.109547 GGTTGATCGCACGTCGCA 61.110 61.111 9.95 0.00 42.60 5.10
234 235 2.093983 GTTGATCGCACGTCGCAC 59.906 61.111 9.95 4.57 42.60 5.34
244 245 2.769617 CGTCGCACGTCACATTCC 59.230 61.111 0.00 0.00 36.74 3.01
245 246 2.019408 CGTCGCACGTCACATTCCA 61.019 57.895 0.00 0.00 36.74 3.53
246 247 1.351430 CGTCGCACGTCACATTCCAT 61.351 55.000 0.00 0.00 36.74 3.41
247 248 0.796312 GTCGCACGTCACATTCCATT 59.204 50.000 0.00 0.00 0.00 3.16
248 249 1.996898 GTCGCACGTCACATTCCATTA 59.003 47.619 0.00 0.00 0.00 1.90
249 250 2.029244 GTCGCACGTCACATTCCATTAG 59.971 50.000 0.00 0.00 0.00 1.73
250 251 1.999735 CGCACGTCACATTCCATTAGT 59.000 47.619 0.00 0.00 0.00 2.24
251 252 3.119424 TCGCACGTCACATTCCATTAGTA 60.119 43.478 0.00 0.00 0.00 1.82
252 253 3.242944 CGCACGTCACATTCCATTAGTAG 59.757 47.826 0.00 0.00 0.00 2.57
253 254 4.430007 GCACGTCACATTCCATTAGTAGA 58.570 43.478 0.00 0.00 0.00 2.59
254 255 4.868171 GCACGTCACATTCCATTAGTAGAA 59.132 41.667 0.00 0.00 0.00 2.10
255 256 5.005779 GCACGTCACATTCCATTAGTAGAAG 59.994 44.000 0.00 0.00 0.00 2.85
256 257 5.520288 CACGTCACATTCCATTAGTAGAAGG 59.480 44.000 0.00 0.00 0.00 3.46
257 258 5.421056 ACGTCACATTCCATTAGTAGAAGGA 59.579 40.000 0.00 0.00 0.00 3.36
258 259 6.070995 ACGTCACATTCCATTAGTAGAAGGAA 60.071 38.462 0.00 0.00 43.63 3.36
259 260 6.255887 CGTCACATTCCATTAGTAGAAGGAAC 59.744 42.308 0.00 0.00 42.42 3.62
260 261 6.539103 GTCACATTCCATTAGTAGAAGGAACC 59.461 42.308 0.00 0.00 42.42 3.62
261 262 5.823045 CACATTCCATTAGTAGAAGGAACCC 59.177 44.000 0.00 0.00 42.42 4.11
262 263 5.104067 ACATTCCATTAGTAGAAGGAACCCC 60.104 44.000 0.00 0.00 42.42 4.95
263 264 3.390819 TCCATTAGTAGAAGGAACCCCC 58.609 50.000 0.00 0.00 0.00 5.40
271 272 4.660938 AGGAACCCCCTTGCGTGC 62.661 66.667 0.00 0.00 44.85 5.34
290 291 4.367023 CCGTCGCACCTTTCCCGA 62.367 66.667 0.00 0.00 0.00 5.14
291 292 2.356553 CGTCGCACCTTTCCCGAA 60.357 61.111 0.00 0.00 32.31 4.30
292 293 1.740296 CGTCGCACCTTTCCCGAAT 60.740 57.895 0.00 0.00 32.31 3.34
293 294 1.296056 CGTCGCACCTTTCCCGAATT 61.296 55.000 0.00 0.00 32.31 2.17
294 295 1.729284 GTCGCACCTTTCCCGAATTA 58.271 50.000 0.00 0.00 32.31 1.40
295 296 1.395954 GTCGCACCTTTCCCGAATTAC 59.604 52.381 0.00 0.00 32.31 1.89
296 297 1.276989 TCGCACCTTTCCCGAATTACT 59.723 47.619 0.00 0.00 0.00 2.24
297 298 2.081462 CGCACCTTTCCCGAATTACTT 58.919 47.619 0.00 0.00 0.00 2.24
298 299 2.095372 CGCACCTTTCCCGAATTACTTC 59.905 50.000 0.00 0.00 0.00 3.01
299 300 3.078837 GCACCTTTCCCGAATTACTTCA 58.921 45.455 0.00 0.00 0.00 3.02
300 301 3.127030 GCACCTTTCCCGAATTACTTCAG 59.873 47.826 0.00 0.00 0.00 3.02
301 302 3.127030 CACCTTTCCCGAATTACTTCAGC 59.873 47.826 0.00 0.00 0.00 4.26
302 303 3.009143 ACCTTTCCCGAATTACTTCAGCT 59.991 43.478 0.00 0.00 0.00 4.24
303 304 3.623510 CCTTTCCCGAATTACTTCAGCTC 59.376 47.826 0.00 0.00 0.00 4.09
304 305 3.973206 TTCCCGAATTACTTCAGCTCA 57.027 42.857 0.00 0.00 0.00 4.26
305 306 3.973206 TCCCGAATTACTTCAGCTCAA 57.027 42.857 0.00 0.00 0.00 3.02
306 307 3.596214 TCCCGAATTACTTCAGCTCAAC 58.404 45.455 0.00 0.00 0.00 3.18
307 308 3.007506 TCCCGAATTACTTCAGCTCAACA 59.992 43.478 0.00 0.00 0.00 3.33
308 309 3.125316 CCCGAATTACTTCAGCTCAACAC 59.875 47.826 0.00 0.00 0.00 3.32
309 310 3.181530 CCGAATTACTTCAGCTCAACACG 60.182 47.826 0.00 0.00 0.00 4.49
310 311 3.181530 CGAATTACTTCAGCTCAACACGG 60.182 47.826 0.00 0.00 0.00 4.94
311 312 3.678056 ATTACTTCAGCTCAACACGGA 57.322 42.857 0.00 0.00 0.00 4.69
312 313 3.462483 TTACTTCAGCTCAACACGGAA 57.538 42.857 0.00 0.00 0.00 4.30
313 314 2.325583 ACTTCAGCTCAACACGGAAA 57.674 45.000 0.00 0.00 0.00 3.13
314 315 2.213499 ACTTCAGCTCAACACGGAAAG 58.787 47.619 0.00 0.00 0.00 2.62
315 316 2.158957 ACTTCAGCTCAACACGGAAAGA 60.159 45.455 0.00 0.00 0.00 2.52
316 317 1.865865 TCAGCTCAACACGGAAAGAC 58.134 50.000 0.00 0.00 0.00 3.01
317 318 0.508641 CAGCTCAACACGGAAAGACG 59.491 55.000 0.00 0.00 40.31 4.18
318 319 0.387929 AGCTCAACACGGAAAGACGA 59.612 50.000 0.00 0.00 37.61 4.20
319 320 1.202486 AGCTCAACACGGAAAGACGAA 60.202 47.619 0.00 0.00 37.61 3.85
320 321 1.192534 GCTCAACACGGAAAGACGAAG 59.807 52.381 0.00 0.00 37.61 3.79
321 322 2.739292 CTCAACACGGAAAGACGAAGA 58.261 47.619 0.00 0.00 37.61 2.87
322 323 2.726760 CTCAACACGGAAAGACGAAGAG 59.273 50.000 0.00 0.00 37.61 2.85
323 324 1.792949 CAACACGGAAAGACGAAGAGG 59.207 52.381 0.00 0.00 37.61 3.69
324 325 1.325355 ACACGGAAAGACGAAGAGGA 58.675 50.000 0.00 0.00 37.61 3.71
325 326 1.684983 ACACGGAAAGACGAAGAGGAA 59.315 47.619 0.00 0.00 37.61 3.36
326 327 2.101917 ACACGGAAAGACGAAGAGGAAA 59.898 45.455 0.00 0.00 37.61 3.13
327 328 3.128349 CACGGAAAGACGAAGAGGAAAA 58.872 45.455 0.00 0.00 37.61 2.29
328 329 3.184581 CACGGAAAGACGAAGAGGAAAAG 59.815 47.826 0.00 0.00 37.61 2.27
329 330 3.181468 ACGGAAAGACGAAGAGGAAAAGT 60.181 43.478 0.00 0.00 37.61 2.66
330 331 3.429207 CGGAAAGACGAAGAGGAAAAGTC 59.571 47.826 0.00 0.00 35.47 3.01
331 332 4.377897 GGAAAGACGAAGAGGAAAAGTCA 58.622 43.478 0.00 0.00 34.56 3.41
332 333 4.449405 GGAAAGACGAAGAGGAAAAGTCAG 59.551 45.833 0.00 0.00 34.56 3.51
333 334 3.033368 AGACGAAGAGGAAAAGTCAGC 57.967 47.619 0.00 0.00 34.56 4.26
334 335 2.630580 AGACGAAGAGGAAAAGTCAGCT 59.369 45.455 0.00 0.00 34.56 4.24
335 336 3.070302 AGACGAAGAGGAAAAGTCAGCTT 59.930 43.478 0.00 0.00 36.30 3.74
336 337 3.394719 ACGAAGAGGAAAAGTCAGCTTC 58.605 45.455 0.00 0.00 34.56 3.86
337 338 3.070302 ACGAAGAGGAAAAGTCAGCTTCT 59.930 43.478 0.00 0.00 35.19 2.85
338 339 4.061596 CGAAGAGGAAAAGTCAGCTTCTT 58.938 43.478 0.00 0.00 35.19 2.52
339 340 4.151512 CGAAGAGGAAAAGTCAGCTTCTTC 59.848 45.833 8.36 8.36 35.19 2.87
340 341 4.696479 AGAGGAAAAGTCAGCTTCTTCA 57.304 40.909 2.01 0.00 31.84 3.02
341 342 4.384940 AGAGGAAAAGTCAGCTTCTTCAC 58.615 43.478 2.01 0.88 31.84 3.18
342 343 3.481453 AGGAAAAGTCAGCTTCTTCACC 58.519 45.455 2.01 7.96 33.01 4.02
343 344 3.137360 AGGAAAAGTCAGCTTCTTCACCT 59.863 43.478 14.39 14.39 33.01 4.00
344 345 3.500299 GGAAAAGTCAGCTTCTTCACCTC 59.500 47.826 2.01 0.00 33.01 3.85
345 346 2.447244 AAGTCAGCTTCTTCACCTCG 57.553 50.000 0.00 0.00 0.00 4.63
346 347 0.037790 AGTCAGCTTCTTCACCTCGC 60.038 55.000 0.00 0.00 0.00 5.03
347 348 1.080501 TCAGCTTCTTCACCTCGCG 60.081 57.895 0.00 0.00 0.00 5.87
348 349 1.373497 CAGCTTCTTCACCTCGCGT 60.373 57.895 5.77 0.00 0.00 6.01
349 350 0.109272 CAGCTTCTTCACCTCGCGTA 60.109 55.000 5.77 0.00 0.00 4.42
350 351 0.818296 AGCTTCTTCACCTCGCGTAT 59.182 50.000 5.77 0.00 0.00 3.06
351 352 1.204941 AGCTTCTTCACCTCGCGTATT 59.795 47.619 5.77 0.00 0.00 1.89
352 353 1.588861 GCTTCTTCACCTCGCGTATTC 59.411 52.381 5.77 0.00 0.00 1.75
353 354 2.876091 CTTCTTCACCTCGCGTATTCA 58.124 47.619 5.77 0.00 0.00 2.57
354 355 3.250744 CTTCTTCACCTCGCGTATTCAA 58.749 45.455 5.77 0.00 0.00 2.69
355 356 3.520290 TCTTCACCTCGCGTATTCAAT 57.480 42.857 5.77 0.00 0.00 2.57
356 357 3.857052 TCTTCACCTCGCGTATTCAATT 58.143 40.909 5.77 0.00 0.00 2.32
357 358 3.616821 TCTTCACCTCGCGTATTCAATTG 59.383 43.478 5.77 0.00 0.00 2.32
358 359 2.967362 TCACCTCGCGTATTCAATTGT 58.033 42.857 5.77 0.00 0.00 2.71
359 360 3.331150 TCACCTCGCGTATTCAATTGTT 58.669 40.909 5.77 0.00 0.00 2.83
360 361 3.369756 TCACCTCGCGTATTCAATTGTTC 59.630 43.478 5.77 0.00 0.00 3.18
361 362 3.124466 CACCTCGCGTATTCAATTGTTCA 59.876 43.478 5.77 0.00 0.00 3.18
362 363 3.124636 ACCTCGCGTATTCAATTGTTCAC 59.875 43.478 5.77 1.14 0.00 3.18
363 364 3.485216 CCTCGCGTATTCAATTGTTCACC 60.485 47.826 5.77 0.00 0.00 4.02
364 365 2.092995 TCGCGTATTCAATTGTTCACCG 59.907 45.455 5.77 4.42 0.00 4.94
365 366 2.159761 CGCGTATTCAATTGTTCACCGT 60.160 45.455 5.13 0.00 0.00 4.83
366 367 3.665848 CGCGTATTCAATTGTTCACCGTT 60.666 43.478 5.13 0.00 0.00 4.44
367 368 3.844099 GCGTATTCAATTGTTCACCGTTC 59.156 43.478 5.13 0.00 0.00 3.95
368 369 4.079028 CGTATTCAATTGTTCACCGTTCG 58.921 43.478 5.13 0.00 0.00 3.95
369 370 3.552604 ATTCAATTGTTCACCGTTCGG 57.447 42.857 9.81 9.81 0.00 4.30
370 371 0.589223 TCAATTGTTCACCGTTCGGC 59.411 50.000 11.32 0.00 0.00 5.54
371 372 0.309302 CAATTGTTCACCGTTCGGCA 59.691 50.000 11.32 0.00 0.00 5.69
372 373 0.591170 AATTGTTCACCGTTCGGCAG 59.409 50.000 11.32 4.68 0.00 4.85
373 374 0.250124 ATTGTTCACCGTTCGGCAGA 60.250 50.000 11.32 6.99 0.00 4.26
374 375 0.878523 TTGTTCACCGTTCGGCAGAG 60.879 55.000 11.32 0.00 0.00 3.35
375 376 1.006571 GTTCACCGTTCGGCAGAGA 60.007 57.895 11.32 2.14 0.00 3.10
376 377 0.599204 GTTCACCGTTCGGCAGAGAA 60.599 55.000 11.32 7.80 0.00 2.87
377 378 0.320374 TTCACCGTTCGGCAGAGAAT 59.680 50.000 11.32 0.00 32.25 2.40
378 379 0.108804 TCACCGTTCGGCAGAGAATC 60.109 55.000 11.32 0.00 32.25 2.52
379 380 1.084370 CACCGTTCGGCAGAGAATCC 61.084 60.000 11.32 0.00 33.66 3.01
380 381 1.218047 CCGTTCGGCAGAGAATCCA 59.782 57.895 0.00 0.00 33.66 3.41
381 382 0.179073 CCGTTCGGCAGAGAATCCAT 60.179 55.000 0.00 0.00 33.66 3.41
382 383 1.068588 CCGTTCGGCAGAGAATCCATA 59.931 52.381 0.00 0.00 33.66 2.74
383 384 2.289072 CCGTTCGGCAGAGAATCCATAT 60.289 50.000 0.00 0.00 33.66 1.78
384 385 2.989840 CGTTCGGCAGAGAATCCATATC 59.010 50.000 0.00 0.00 33.66 1.63
385 386 3.330267 GTTCGGCAGAGAATCCATATCC 58.670 50.000 0.00 0.00 33.66 2.59
386 387 2.608623 TCGGCAGAGAATCCATATCCA 58.391 47.619 0.00 0.00 33.66 3.41
387 388 3.176411 TCGGCAGAGAATCCATATCCAT 58.824 45.455 0.00 0.00 33.66 3.41
388 389 4.352893 TCGGCAGAGAATCCATATCCATA 58.647 43.478 0.00 0.00 33.66 2.74
389 390 4.964897 TCGGCAGAGAATCCATATCCATAT 59.035 41.667 0.00 0.00 33.66 1.78
1051 1080 0.038166 GTTGCCTCTGTCAATGGGGA 59.962 55.000 0.00 0.00 0.00 4.81
1052 1081 0.038166 TTGCCTCTGTCAATGGGGAC 59.962 55.000 0.00 0.00 38.29 4.46
1053 1082 1.450312 GCCTCTGTCAATGGGGACG 60.450 63.158 0.00 0.00 40.72 4.79
1054 1083 1.899437 GCCTCTGTCAATGGGGACGA 61.899 60.000 0.00 0.00 40.72 4.20
1623 1665 1.938577 GCGTCTGTCGTCTCTGGTATA 59.061 52.381 0.00 0.00 42.13 1.47
2132 2201 0.684535 TGGATGTGCTCGGTTTCTCA 59.315 50.000 0.00 0.00 0.00 3.27
2413 2490 7.758613 AAAATAAAAATTGTTCACCGTTCGT 57.241 28.000 0.00 0.00 0.00 3.85
2414 2491 6.741448 AATAAAAATTGTTCACCGTTCGTG 57.259 33.333 0.00 0.00 44.50 4.35
2415 2492 3.768468 AAAATTGTTCACCGTTCGTGT 57.232 38.095 0.00 0.00 43.51 4.49
2416 2493 3.328237 AAATTGTTCACCGTTCGTGTC 57.672 42.857 0.00 0.00 43.51 3.67
2417 2494 0.856641 ATTGTTCACCGTTCGTGTCG 59.143 50.000 0.00 0.00 43.51 4.35
2418 2495 1.754436 TTGTTCACCGTTCGTGTCGC 61.754 55.000 0.00 0.00 43.51 5.19
2419 2496 2.659244 TTCACCGTTCGTGTCGCC 60.659 61.111 0.00 0.00 43.51 5.54
2420 2497 4.986587 TCACCGTTCGTGTCGCCG 62.987 66.667 0.00 0.00 43.51 6.46
2421 2498 4.986587 CACCGTTCGTGTCGCCGA 62.987 66.667 0.00 0.00 37.73 5.54
2422 2499 4.988486 ACCGTTCGTGTCGCCGAC 62.988 66.667 10.96 10.96 36.42 4.79
2425 2502 4.651008 GTTCGTGTCGCCGACCCA 62.651 66.667 15.60 0.00 36.42 4.51
2426 2503 3.914117 TTCGTGTCGCCGACCCAA 61.914 61.111 15.60 1.59 36.42 4.12
2427 2504 3.229156 TTCGTGTCGCCGACCCAAT 62.229 57.895 15.60 0.00 36.42 3.16
2428 2505 2.718747 TTCGTGTCGCCGACCCAATT 62.719 55.000 15.60 0.00 36.42 2.32
2429 2506 1.446445 CGTGTCGCCGACCCAATTA 60.446 57.895 15.60 0.00 0.00 1.40
2430 2507 1.015085 CGTGTCGCCGACCCAATTAA 61.015 55.000 15.60 0.00 0.00 1.40
2431 2508 0.725117 GTGTCGCCGACCCAATTAAG 59.275 55.000 15.60 0.00 0.00 1.85
2432 2509 0.391927 TGTCGCCGACCCAATTAAGG 60.392 55.000 15.60 0.00 0.00 2.69
2441 2518 2.413310 CCCAATTAAGGGTAGCACGT 57.587 50.000 0.00 0.00 44.24 4.49
2442 2519 3.547054 CCCAATTAAGGGTAGCACGTA 57.453 47.619 0.00 0.00 44.24 3.57
2443 2520 4.081322 CCCAATTAAGGGTAGCACGTAT 57.919 45.455 0.00 0.00 44.24 3.06
2444 2521 4.457466 CCCAATTAAGGGTAGCACGTATT 58.543 43.478 0.00 0.00 44.24 1.89
2445 2522 4.274950 CCCAATTAAGGGTAGCACGTATTG 59.725 45.833 0.00 0.00 44.24 1.90
2457 2534 3.738286 CACGTATTGCTTGCACATACA 57.262 42.857 18.34 0.00 0.00 2.29
2458 2535 4.077063 CACGTATTGCTTGCACATACAA 57.923 40.909 18.34 0.00 0.00 2.41
2459 2536 4.471373 CACGTATTGCTTGCACATACAAA 58.529 39.130 18.34 0.00 0.00 2.83
2460 2537 4.320690 CACGTATTGCTTGCACATACAAAC 59.679 41.667 18.34 0.00 0.00 2.93
2461 2538 3.538003 CGTATTGCTTGCACATACAAACG 59.462 43.478 18.34 0.00 0.00 3.60
2462 2539 1.764851 TTGCTTGCACATACAAACGC 58.235 45.000 0.00 0.00 0.00 4.84
2463 2540 0.665298 TGCTTGCACATACAAACGCA 59.335 45.000 0.00 0.00 30.84 5.24
2464 2541 1.269174 TGCTTGCACATACAAACGCAT 59.731 42.857 0.00 0.00 33.71 4.73
2465 2542 1.913403 GCTTGCACATACAAACGCATC 59.087 47.619 0.00 0.00 33.71 3.91
2466 2543 2.518949 CTTGCACATACAAACGCATCC 58.481 47.619 0.00 0.00 33.71 3.51
2467 2544 1.528129 TGCACATACAAACGCATCCA 58.472 45.000 0.00 0.00 0.00 3.41
2468 2545 1.468127 TGCACATACAAACGCATCCAG 59.532 47.619 0.00 0.00 0.00 3.86
2469 2546 1.468520 GCACATACAAACGCATCCAGT 59.531 47.619 0.00 0.00 0.00 4.00
2470 2547 2.728846 GCACATACAAACGCATCCAGTG 60.729 50.000 0.00 0.00 0.00 3.66
2484 2561 3.639099 CAGTGCCTGGATTGTGTCT 57.361 52.632 0.00 0.00 0.00 3.41
2485 2562 1.162698 CAGTGCCTGGATTGTGTCTG 58.837 55.000 0.00 0.00 0.00 3.51
2486 2563 0.767375 AGTGCCTGGATTGTGTCTGT 59.233 50.000 0.00 0.00 0.00 3.41
2487 2564 0.877071 GTGCCTGGATTGTGTCTGTG 59.123 55.000 0.00 0.00 0.00 3.66
2488 2565 0.764271 TGCCTGGATTGTGTCTGTGA 59.236 50.000 0.00 0.00 0.00 3.58
2489 2566 1.142667 TGCCTGGATTGTGTCTGTGAA 59.857 47.619 0.00 0.00 0.00 3.18
2490 2567 1.808945 GCCTGGATTGTGTCTGTGAAG 59.191 52.381 0.00 0.00 0.00 3.02
2491 2568 2.811873 GCCTGGATTGTGTCTGTGAAGT 60.812 50.000 0.00 0.00 0.00 3.01
2492 2569 3.070018 CCTGGATTGTGTCTGTGAAGTC 58.930 50.000 0.00 0.00 0.00 3.01
2493 2570 3.244353 CCTGGATTGTGTCTGTGAAGTCT 60.244 47.826 0.00 0.00 0.00 3.24
2494 2571 3.732212 TGGATTGTGTCTGTGAAGTCTG 58.268 45.455 0.00 0.00 0.00 3.51
2495 2572 3.387699 TGGATTGTGTCTGTGAAGTCTGA 59.612 43.478 0.00 0.00 0.00 3.27
2496 2573 3.743396 GGATTGTGTCTGTGAAGTCTGAC 59.257 47.826 0.00 0.00 37.00 3.51
2497 2574 4.502259 GGATTGTGTCTGTGAAGTCTGACT 60.502 45.833 4.06 4.06 37.25 3.41
2498 2575 4.471904 TTGTGTCTGTGAAGTCTGACTT 57.528 40.909 22.20 22.20 41.95 3.01
2511 2588 6.620877 AAGTCTGACTTCATATGGTAACCA 57.379 37.500 17.00 0.00 31.77 3.67
2512 2589 6.620877 AGTCTGACTTCATATGGTAACCAA 57.379 37.500 4.06 0.00 36.95 3.67
2513 2590 6.407202 AGTCTGACTTCATATGGTAACCAAC 58.593 40.000 4.06 0.00 36.95 3.77
2514 2591 5.291128 GTCTGACTTCATATGGTAACCAACG 59.709 44.000 2.13 0.00 36.95 4.10
2515 2592 3.936453 TGACTTCATATGGTAACCAACGC 59.064 43.478 2.13 0.00 36.95 4.84
2516 2593 3.936453 GACTTCATATGGTAACCAACGCA 59.064 43.478 2.13 0.00 36.95 5.24
2517 2594 4.328536 ACTTCATATGGTAACCAACGCAA 58.671 39.130 2.13 0.00 36.95 4.85
2518 2595 4.762765 ACTTCATATGGTAACCAACGCAAA 59.237 37.500 2.13 0.00 36.95 3.68
2519 2596 4.955925 TCATATGGTAACCAACGCAAAG 57.044 40.909 2.13 0.00 36.95 2.77
2520 2597 4.328536 TCATATGGTAACCAACGCAAAGT 58.671 39.130 2.13 0.00 36.95 2.66
2521 2598 4.762765 TCATATGGTAACCAACGCAAAGTT 59.237 37.500 2.13 0.00 45.45 2.66
2559 2636 2.397549 GTGCAGACAATTCCAAACAGC 58.602 47.619 0.00 0.00 0.00 4.40
2583 2660 7.172019 AGCTTTTGTTTTTGCTTATCCTGATTG 59.828 33.333 0.00 0.00 30.96 2.67
2618 2699 1.134670 GTGCTGTCCCATCAGTCTACC 60.135 57.143 0.00 0.00 37.70 3.18
2627 2713 4.044317 TCCCATCAGTCTACCCTATAGGAC 59.956 50.000 21.07 10.16 39.89 3.85
2628 2714 4.044825 CCCATCAGTCTACCCTATAGGACT 59.955 50.000 21.07 12.36 39.28 3.85
2631 2717 5.321934 TCAGTCTACCCTATAGGACTTCC 57.678 47.826 21.07 5.11 36.99 3.46
2645 2731 3.574826 AGGACTTCCATATAGCGAGTTCC 59.425 47.826 0.00 0.00 38.89 3.62
2687 2773 1.229428 TTCTTCGCAGGAACTTGCAG 58.771 50.000 9.35 0.79 34.60 4.41
2699 2785 6.327934 CAGGAACTTGCAGGAAATATTTCTG 58.672 40.000 23.85 19.83 34.60 3.02
2712 2798 5.537300 AATATTTCTGAAGGCTAGCTCGA 57.463 39.130 15.72 4.78 0.00 4.04
2768 2854 3.044059 GCCACTGCTGAACCATCGC 62.044 63.158 0.00 0.00 33.53 4.58
2800 2890 1.552337 ACAGCCACAGGTGACAGATAG 59.448 52.381 0.00 0.00 44.53 2.08
2814 2904 3.435275 ACAGATAGTCCTCTGCTGAACA 58.565 45.455 0.00 0.00 45.37 3.18
2817 2907 4.809958 CAGATAGTCCTCTGCTGAACAATG 59.190 45.833 0.00 0.00 36.53 2.82
2830 2920 2.306805 TGAACAATGATCCCTGCTGTCT 59.693 45.455 0.00 0.00 0.00 3.41
2831 2921 3.519107 TGAACAATGATCCCTGCTGTCTA 59.481 43.478 0.00 0.00 0.00 2.59
2832 2922 3.550437 ACAATGATCCCTGCTGTCTAC 57.450 47.619 0.00 0.00 0.00 2.59
2833 2923 3.110705 ACAATGATCCCTGCTGTCTACT 58.889 45.455 0.00 0.00 0.00 2.57
2834 2924 3.118482 ACAATGATCCCTGCTGTCTACTG 60.118 47.826 0.00 0.00 0.00 2.74
2840 2930 3.982516 TCCCTGCTGTCTACTGTAGATT 58.017 45.455 19.59 0.00 37.13 2.40
2841 2931 4.353777 TCCCTGCTGTCTACTGTAGATTT 58.646 43.478 19.59 0.00 37.13 2.17
2845 2935 6.344500 CCTGCTGTCTACTGTAGATTTCATT 58.656 40.000 19.59 0.00 37.13 2.57
2863 2953 9.342308 GATTTCATTCTATAGTGTGGAATTGGA 57.658 33.333 12.06 0.00 36.04 3.53
2864 2954 9.699410 ATTTCATTCTATAGTGTGGAATTGGAA 57.301 29.630 0.00 0.00 36.04 3.53
2866 2956 8.506168 TCATTCTATAGTGTGGAATTGGAAAC 57.494 34.615 0.00 0.00 36.04 2.78
2901 3042 2.685388 TGCATTTGTTGTTCAGGACGAA 59.315 40.909 0.00 0.00 0.00 3.85
2916 3057 4.031765 CAGGACGAATGTTCAAGATACACG 59.968 45.833 0.00 0.00 0.00 4.49
2925 3066 3.165058 TCAAGATACACGAGTGATGGC 57.835 47.619 10.50 0.00 0.00 4.40
2997 3138 1.209019 AGAGCATGCGTCTTCATCCTT 59.791 47.619 13.01 0.00 0.00 3.36
3007 3148 1.899814 TCTTCATCCTTGGTACTGCGT 59.100 47.619 0.00 0.00 0.00 5.24
3009 3150 3.512329 TCTTCATCCTTGGTACTGCGTAA 59.488 43.478 0.00 0.00 0.00 3.18
3014 3155 4.870123 TCCTTGGTACTGCGTAAAGTTA 57.130 40.909 0.00 0.00 0.00 2.24
3015 3156 4.559153 TCCTTGGTACTGCGTAAAGTTAC 58.441 43.478 0.00 0.00 0.00 2.50
3016 3157 4.039004 TCCTTGGTACTGCGTAAAGTTACA 59.961 41.667 2.36 0.00 33.28 2.41
3021 3162 5.759273 TGGTACTGCGTAAAGTTACAAACAT 59.241 36.000 2.36 0.00 33.28 2.71
3022 3163 6.927936 TGGTACTGCGTAAAGTTACAAACATA 59.072 34.615 2.36 0.00 33.28 2.29
3023 3164 7.603404 TGGTACTGCGTAAAGTTACAAACATAT 59.397 33.333 2.36 0.00 33.28 1.78
3024 3165 7.901377 GGTACTGCGTAAAGTTACAAACATATG 59.099 37.037 0.00 0.00 33.28 1.78
3025 3166 6.311723 ACTGCGTAAAGTTACAAACATATGC 58.688 36.000 1.58 10.45 37.93 3.14
3027 3168 6.904498 TGCGTAAAGTTACAAACATATGCTT 58.096 32.000 1.58 0.00 38.11 3.91
3028 3169 7.018826 TGCGTAAAGTTACAAACATATGCTTC 58.981 34.615 1.58 0.00 38.11 3.86
3029 3170 6.468000 GCGTAAAGTTACAAACATATGCTTCC 59.532 38.462 1.58 0.00 36.18 3.46
3030 3171 7.625606 GCGTAAAGTTACAAACATATGCTTCCT 60.626 37.037 1.58 0.00 36.18 3.36
3031 3172 7.903431 CGTAAAGTTACAAACATATGCTTCCTC 59.097 37.037 1.58 0.00 33.28 3.71
3032 3173 6.759497 AAGTTACAAACATATGCTTCCTCC 57.241 37.500 1.58 0.00 0.00 4.30
3033 3174 5.815581 AGTTACAAACATATGCTTCCTCCA 58.184 37.500 1.58 0.00 0.00 3.86
3069 3210 9.315525 GCCTTTCTTCTAAAGTAACCTGTATAG 57.684 37.037 0.00 0.00 0.00 1.31
3082 3223 1.000827 CTGTATAGCTCAGGTGCCGAG 60.001 57.143 0.00 5.96 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.377856 GCTGAGGCCTGTTCTTCCC 60.378 63.158 12.00 0.00 0.00 3.97
1 2 4.310288 GCTGAGGCCTGTTCTTCC 57.690 61.111 12.00 0.00 0.00 3.46
11 12 0.179078 CTGATGAGTGAGGCTGAGGC 60.179 60.000 0.00 0.00 37.82 4.70
12 13 0.464870 CCTGATGAGTGAGGCTGAGG 59.535 60.000 0.00 0.00 0.00 3.86
13 14 1.136695 GACCTGATGAGTGAGGCTGAG 59.863 57.143 0.00 0.00 30.90 3.35
14 15 1.189752 GACCTGATGAGTGAGGCTGA 58.810 55.000 0.00 0.00 30.90 4.26
15 16 1.136695 GAGACCTGATGAGTGAGGCTG 59.863 57.143 0.00 0.00 30.90 4.85
16 17 1.006998 AGAGACCTGATGAGTGAGGCT 59.993 52.381 0.00 0.00 30.90 4.58
17 18 1.408702 GAGAGACCTGATGAGTGAGGC 59.591 57.143 0.00 0.00 30.90 4.70
18 19 2.031120 GGAGAGACCTGATGAGTGAGG 58.969 57.143 0.00 0.00 34.49 3.86
19 20 2.031120 GGGAGAGACCTGATGAGTGAG 58.969 57.143 0.00 0.00 38.98 3.51
20 21 1.643286 AGGGAGAGACCTGATGAGTGA 59.357 52.381 0.00 0.00 40.04 3.41
21 22 2.031120 GAGGGAGAGACCTGATGAGTG 58.969 57.143 0.00 0.00 42.10 3.51
22 23 1.929494 AGAGGGAGAGACCTGATGAGT 59.071 52.381 0.00 0.00 42.10 3.41
23 24 2.586425 GAGAGGGAGAGACCTGATGAG 58.414 57.143 0.00 0.00 42.10 2.90
24 25 1.216678 GGAGAGGGAGAGACCTGATGA 59.783 57.143 0.00 0.00 42.10 2.92
25 26 1.703411 GGAGAGGGAGAGACCTGATG 58.297 60.000 0.00 0.00 42.10 3.07
26 27 0.560688 GGGAGAGGGAGAGACCTGAT 59.439 60.000 0.00 0.00 42.10 2.90
27 28 0.553862 AGGGAGAGGGAGAGACCTGA 60.554 60.000 0.00 0.00 42.10 3.86
28 29 0.106217 GAGGGAGAGGGAGAGACCTG 60.106 65.000 0.00 0.00 42.10 4.00
29 30 0.254107 AGAGGGAGAGGGAGAGACCT 60.254 60.000 0.00 0.00 45.57 3.85
30 31 0.185175 GAGAGGGAGAGGGAGAGACC 59.815 65.000 0.00 0.00 38.08 3.85
31 32 1.143073 GAGAGAGGGAGAGGGAGAGAC 59.857 61.905 0.00 0.00 0.00 3.36
32 33 1.010793 AGAGAGAGGGAGAGGGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
33 34 1.421646 GAGAGAGAGGGAGAGGGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
34 35 1.010793 AGAGAGAGAGGGAGAGGGAGA 59.989 57.143 0.00 0.00 0.00 3.71
35 36 1.421646 GAGAGAGAGAGGGAGAGGGAG 59.578 61.905 0.00 0.00 0.00 4.30
36 37 1.274708 TGAGAGAGAGAGGGAGAGGGA 60.275 57.143 0.00 0.00 0.00 4.20
37 38 1.221635 TGAGAGAGAGAGGGAGAGGG 58.778 60.000 0.00 0.00 0.00 4.30
38 39 3.600448 ATTGAGAGAGAGAGGGAGAGG 57.400 52.381 0.00 0.00 0.00 3.69
39 40 4.711355 ACAAATTGAGAGAGAGAGGGAGAG 59.289 45.833 0.00 0.00 0.00 3.20
40 41 4.682563 ACAAATTGAGAGAGAGAGGGAGA 58.317 43.478 0.00 0.00 0.00 3.71
41 42 5.419239 AACAAATTGAGAGAGAGAGGGAG 57.581 43.478 0.00 0.00 0.00 4.30
42 43 5.307976 TCAAACAAATTGAGAGAGAGAGGGA 59.692 40.000 0.00 0.00 43.08 4.20
43 44 5.555017 TCAAACAAATTGAGAGAGAGAGGG 58.445 41.667 0.00 0.00 43.08 4.30
54 55 9.171877 AGGTAAGCAAATTTTCAAACAAATTGA 57.828 25.926 0.00 0.00 46.22 2.57
55 56 9.786105 AAGGTAAGCAAATTTTCAAACAAATTG 57.214 25.926 0.00 0.00 36.63 2.32
57 58 9.786105 CAAAGGTAAGCAAATTTTCAAACAAAT 57.214 25.926 0.00 0.00 0.00 2.32
58 59 8.787852 ACAAAGGTAAGCAAATTTTCAAACAAA 58.212 25.926 0.00 0.00 0.00 2.83
59 60 8.329203 ACAAAGGTAAGCAAATTTTCAAACAA 57.671 26.923 0.00 0.00 0.00 2.83
60 61 7.821846 AGACAAAGGTAAGCAAATTTTCAAACA 59.178 29.630 0.00 0.00 0.00 2.83
61 62 8.196802 AGACAAAGGTAAGCAAATTTTCAAAC 57.803 30.769 0.00 0.00 0.00 2.93
62 63 7.221838 CGAGACAAAGGTAAGCAAATTTTCAAA 59.778 33.333 0.00 0.00 0.00 2.69
63 64 6.695278 CGAGACAAAGGTAAGCAAATTTTCAA 59.305 34.615 0.00 0.00 0.00 2.69
64 65 6.205784 CGAGACAAAGGTAAGCAAATTTTCA 58.794 36.000 0.00 0.00 0.00 2.69
65 66 5.117135 GCGAGACAAAGGTAAGCAAATTTTC 59.883 40.000 0.00 0.00 0.00 2.29
66 67 4.982295 GCGAGACAAAGGTAAGCAAATTTT 59.018 37.500 0.00 0.00 0.00 1.82
67 68 4.546570 GCGAGACAAAGGTAAGCAAATTT 58.453 39.130 0.00 0.00 0.00 1.82
68 69 3.057526 GGCGAGACAAAGGTAAGCAAATT 60.058 43.478 0.00 0.00 0.00 1.82
69 70 2.488153 GGCGAGACAAAGGTAAGCAAAT 59.512 45.455 0.00 0.00 0.00 2.32
70 71 1.877443 GGCGAGACAAAGGTAAGCAAA 59.123 47.619 0.00 0.00 0.00 3.68
71 72 1.202710 TGGCGAGACAAAGGTAAGCAA 60.203 47.619 0.00 0.00 0.00 3.91
72 73 0.394938 TGGCGAGACAAAGGTAAGCA 59.605 50.000 0.00 0.00 0.00 3.91
73 74 1.079503 CTGGCGAGACAAAGGTAAGC 58.920 55.000 0.00 0.00 0.00 3.09
74 75 2.069273 CACTGGCGAGACAAAGGTAAG 58.931 52.381 1.44 0.00 0.00 2.34
75 76 1.270625 CCACTGGCGAGACAAAGGTAA 60.271 52.381 1.44 0.00 0.00 2.85
76 77 0.320374 CCACTGGCGAGACAAAGGTA 59.680 55.000 1.44 0.00 0.00 3.08
77 78 1.071471 CCACTGGCGAGACAAAGGT 59.929 57.895 1.44 0.00 0.00 3.50
78 79 0.535102 AACCACTGGCGAGACAAAGG 60.535 55.000 1.44 0.00 0.00 3.11
79 80 1.308998 AAACCACTGGCGAGACAAAG 58.691 50.000 1.44 0.00 0.00 2.77
80 81 1.757682 AAAACCACTGGCGAGACAAA 58.242 45.000 1.44 0.00 0.00 2.83
81 82 1.673920 GAAAAACCACTGGCGAGACAA 59.326 47.619 1.44 0.00 0.00 3.18
82 83 1.134220 AGAAAAACCACTGGCGAGACA 60.134 47.619 1.44 0.00 0.00 3.41
83 84 1.531578 GAGAAAAACCACTGGCGAGAC 59.468 52.381 1.44 0.00 0.00 3.36
84 85 1.140052 TGAGAAAAACCACTGGCGAGA 59.860 47.619 1.44 0.00 0.00 4.04
85 86 1.264288 GTGAGAAAAACCACTGGCGAG 59.736 52.381 0.00 0.00 0.00 5.03
86 87 1.305201 GTGAGAAAAACCACTGGCGA 58.695 50.000 0.00 0.00 0.00 5.54
87 88 0.041312 CGTGAGAAAAACCACTGGCG 60.041 55.000 0.00 0.00 0.00 5.69
88 89 0.310854 CCGTGAGAAAAACCACTGGC 59.689 55.000 0.00 0.00 0.00 4.85
89 90 1.961793 TCCGTGAGAAAAACCACTGG 58.038 50.000 0.00 0.00 0.00 4.00
99 100 5.107104 CGATTTTGAGTCATTTCCGTGAGAA 60.107 40.000 0.00 0.00 0.00 2.87
100 101 4.388773 CGATTTTGAGTCATTTCCGTGAGA 59.611 41.667 0.00 0.00 0.00 3.27
101 102 4.388773 TCGATTTTGAGTCATTTCCGTGAG 59.611 41.667 0.00 0.00 0.00 3.51
102 103 4.311606 TCGATTTTGAGTCATTTCCGTGA 58.688 39.130 0.00 0.00 0.00 4.35
103 104 4.641954 CTCGATTTTGAGTCATTTCCGTG 58.358 43.478 0.00 0.00 0.00 4.94
104 105 3.125316 GCTCGATTTTGAGTCATTTCCGT 59.875 43.478 0.00 0.00 38.28 4.69
105 106 3.372206 AGCTCGATTTTGAGTCATTTCCG 59.628 43.478 0.00 0.00 38.28 4.30
106 107 4.954092 AGCTCGATTTTGAGTCATTTCC 57.046 40.909 0.00 0.00 38.28 3.13
107 108 5.018240 CGAAGCTCGATTTTGAGTCATTTC 58.982 41.667 0.00 0.00 43.74 2.17
108 109 4.962693 CGAAGCTCGATTTTGAGTCATTT 58.037 39.130 0.00 0.00 43.74 2.32
109 110 4.590400 CGAAGCTCGATTTTGAGTCATT 57.410 40.909 0.00 0.00 43.74 2.57
126 127 1.373497 AGTTCTGTGCCGAGCGAAG 60.373 57.895 0.00 0.00 0.00 3.79
127 128 1.664649 CAGTTCTGTGCCGAGCGAA 60.665 57.895 0.00 0.00 0.00 4.70
128 129 2.049156 CAGTTCTGTGCCGAGCGA 60.049 61.111 0.00 0.00 0.00 4.93
129 130 1.956170 AACAGTTCTGTGCCGAGCG 60.956 57.895 6.22 0.00 0.00 5.03
130 131 1.160329 ACAACAGTTCTGTGCCGAGC 61.160 55.000 6.22 0.00 0.00 5.03
131 132 1.003545 CAACAACAGTTCTGTGCCGAG 60.004 52.381 6.22 0.00 0.00 4.63
132 133 1.013596 CAACAACAGTTCTGTGCCGA 58.986 50.000 6.22 0.00 0.00 5.54
133 134 0.592247 GCAACAACAGTTCTGTGCCG 60.592 55.000 6.22 1.77 0.00 5.69
134 135 0.455410 TGCAACAACAGTTCTGTGCC 59.545 50.000 6.22 0.00 0.00 5.01
135 136 2.497107 ATGCAACAACAGTTCTGTGC 57.503 45.000 6.22 6.26 0.00 4.57
136 137 2.536803 GCAATGCAACAACAGTTCTGTG 59.463 45.455 0.00 4.06 0.00 3.66
137 138 2.166050 TGCAATGCAACAACAGTTCTGT 59.834 40.909 5.01 0.00 34.76 3.41
138 139 2.811855 TGCAATGCAACAACAGTTCTG 58.188 42.857 5.01 0.00 34.76 3.02
139 140 3.738830 ATGCAATGCAACAACAGTTCT 57.261 38.095 13.45 0.00 43.62 3.01
140 141 4.744137 TGTTATGCAATGCAACAACAGTTC 59.256 37.500 25.06 8.35 43.62 3.01
141 142 4.691175 TGTTATGCAATGCAACAACAGTT 58.309 34.783 25.06 6.77 43.62 3.16
142 143 4.319139 TGTTATGCAATGCAACAACAGT 57.681 36.364 25.06 7.41 43.62 3.55
143 144 5.849357 ATTGTTATGCAATGCAACAACAG 57.151 34.783 26.33 0.00 45.35 3.16
144 145 7.095270 TCATATTGTTATGCAATGCAACAACA 58.905 30.769 25.06 25.06 46.40 3.33
145 146 7.522901 TCATATTGTTATGCAATGCAACAAC 57.477 32.000 22.74 22.15 46.40 3.32
146 147 7.064371 GGTTCATATTGTTATGCAATGCAACAA 59.936 33.333 22.58 22.58 46.40 2.83
147 148 6.534436 GGTTCATATTGTTATGCAATGCAACA 59.466 34.615 13.45 10.59 46.40 3.33
148 149 6.757947 AGGTTCATATTGTTATGCAATGCAAC 59.242 34.615 13.45 7.64 46.40 4.17
149 150 6.757478 CAGGTTCATATTGTTATGCAATGCAA 59.243 34.615 13.45 0.00 46.40 4.08
150 151 6.096564 TCAGGTTCATATTGTTATGCAATGCA 59.903 34.615 11.44 11.44 46.40 3.96
151 152 6.506147 TCAGGTTCATATTGTTATGCAATGC 58.494 36.000 0.00 0.00 46.40 3.56
152 153 8.929827 TTTCAGGTTCATATTGTTATGCAATG 57.070 30.769 0.00 0.00 46.40 2.82
154 155 7.035004 GCTTTCAGGTTCATATTGTTATGCAA 58.965 34.615 0.00 0.00 41.89 4.08
155 156 6.405731 GGCTTTCAGGTTCATATTGTTATGCA 60.406 38.462 0.00 0.00 36.03 3.96
156 157 5.979517 GGCTTTCAGGTTCATATTGTTATGC 59.020 40.000 0.00 0.00 36.03 3.14
157 158 6.096705 TGGGCTTTCAGGTTCATATTGTTATG 59.903 38.462 0.00 0.00 37.19 1.90
158 159 6.194235 TGGGCTTTCAGGTTCATATTGTTAT 58.806 36.000 0.00 0.00 0.00 1.89
159 160 5.575157 TGGGCTTTCAGGTTCATATTGTTA 58.425 37.500 0.00 0.00 0.00 2.41
160 161 4.415596 TGGGCTTTCAGGTTCATATTGTT 58.584 39.130 0.00 0.00 0.00 2.83
161 162 4.019174 CTGGGCTTTCAGGTTCATATTGT 58.981 43.478 0.00 0.00 0.00 2.71
162 163 3.382546 CCTGGGCTTTCAGGTTCATATTG 59.617 47.826 11.39 0.00 46.89 1.90
163 164 3.635591 CCTGGGCTTTCAGGTTCATATT 58.364 45.455 11.39 0.00 46.89 1.28
164 165 3.303351 CCTGGGCTTTCAGGTTCATAT 57.697 47.619 11.39 0.00 46.89 1.78
165 166 2.806945 CCTGGGCTTTCAGGTTCATA 57.193 50.000 11.39 0.00 46.89 2.15
166 167 3.677963 CCTGGGCTTTCAGGTTCAT 57.322 52.632 11.39 0.00 46.89 2.57
172 173 0.037303 TCTCTTGCCTGGGCTTTCAG 59.963 55.000 13.05 4.20 42.51 3.02
173 174 0.700564 ATCTCTTGCCTGGGCTTTCA 59.299 50.000 13.05 0.00 42.51 2.69
174 175 1.387539 GATCTCTTGCCTGGGCTTTC 58.612 55.000 13.05 0.00 42.51 2.62
175 176 0.393537 CGATCTCTTGCCTGGGCTTT 60.394 55.000 13.05 0.00 42.51 3.51
176 177 1.222936 CGATCTCTTGCCTGGGCTT 59.777 57.895 13.05 0.00 42.51 4.35
177 178 2.906458 CGATCTCTTGCCTGGGCT 59.094 61.111 13.05 0.00 42.51 5.19
178 179 2.899339 GCGATCTCTTGCCTGGGC 60.899 66.667 4.43 4.43 42.35 5.36
179 180 1.147824 ATGCGATCTCTTGCCTGGG 59.852 57.895 0.00 0.00 0.00 4.45
180 181 0.463295 ACATGCGATCTCTTGCCTGG 60.463 55.000 0.00 0.00 33.12 4.45
181 182 0.935898 GACATGCGATCTCTTGCCTG 59.064 55.000 0.00 0.00 34.54 4.85
182 183 0.529337 CGACATGCGATCTCTTGCCT 60.529 55.000 3.85 0.00 44.57 4.75
183 184 1.930100 CGACATGCGATCTCTTGCC 59.070 57.895 3.85 0.00 44.57 4.52
184 185 1.275066 GCGACATGCGATCTCTTGC 59.725 57.895 12.67 0.00 44.57 4.01
194 195 1.293963 TTGCTCAGACTGCGACATGC 61.294 55.000 0.00 0.00 46.70 4.06
195 196 0.441533 GTTGCTCAGACTGCGACATG 59.558 55.000 0.00 0.00 42.63 3.21
196 197 0.033920 TGTTGCTCAGACTGCGACAT 59.966 50.000 4.17 0.00 46.27 3.06
197 198 4.343581 GTTGCTCAGACTGCGACA 57.656 55.556 0.00 0.00 42.63 4.35
198 199 1.287730 CCTGTTGCTCAGACTGCGAC 61.288 60.000 10.22 0.00 46.27 5.19
199 200 1.005748 CCTGTTGCTCAGACTGCGA 60.006 57.895 10.22 0.00 46.27 5.10
200 201 0.882042 AACCTGTTGCTCAGACTGCG 60.882 55.000 10.22 0.00 46.27 5.18
201 202 0.590195 CAACCTGTTGCTCAGACTGC 59.410 55.000 10.22 0.00 46.27 4.40
202 203 2.245159 TCAACCTGTTGCTCAGACTG 57.755 50.000 5.14 0.00 46.27 3.51
203 204 2.611473 CGATCAACCTGTTGCTCAGACT 60.611 50.000 12.67 0.00 46.27 3.24
204 205 1.728971 CGATCAACCTGTTGCTCAGAC 59.271 52.381 12.67 0.00 46.27 3.51
205 206 1.941209 GCGATCAACCTGTTGCTCAGA 60.941 52.381 12.67 0.00 46.27 3.27
206 207 0.445436 GCGATCAACCTGTTGCTCAG 59.555 55.000 12.67 7.58 43.27 3.35
207 208 0.250252 TGCGATCAACCTGTTGCTCA 60.250 50.000 12.67 3.20 40.24 4.26
208 209 0.166814 GTGCGATCAACCTGTTGCTC 59.833 55.000 5.14 4.66 40.24 4.26
209 210 1.568612 CGTGCGATCAACCTGTTGCT 61.569 55.000 5.14 0.00 40.24 3.91
210 211 1.154413 CGTGCGATCAACCTGTTGC 60.154 57.895 5.14 0.00 40.24 4.17
211 212 0.163788 GACGTGCGATCAACCTGTTG 59.836 55.000 0.00 3.61 41.71 3.33
212 213 1.282248 CGACGTGCGATCAACCTGTT 61.282 55.000 0.00 0.00 44.57 3.16
213 214 1.733041 CGACGTGCGATCAACCTGT 60.733 57.895 0.00 0.00 44.57 4.00
214 215 3.071459 GCGACGTGCGATCAACCTG 62.071 63.158 10.82 0.00 44.57 4.00
215 216 2.809601 GCGACGTGCGATCAACCT 60.810 61.111 10.82 0.00 44.57 3.50
228 229 0.796312 AATGGAATGTGACGTGCGAC 59.204 50.000 0.00 0.00 0.00 5.19
229 230 2.267426 CTAATGGAATGTGACGTGCGA 58.733 47.619 0.00 0.00 0.00 5.10
230 231 1.999735 ACTAATGGAATGTGACGTGCG 59.000 47.619 0.00 0.00 0.00 5.34
231 232 4.430007 TCTACTAATGGAATGTGACGTGC 58.570 43.478 0.00 0.00 0.00 5.34
232 233 5.520288 CCTTCTACTAATGGAATGTGACGTG 59.480 44.000 0.00 0.00 0.00 4.49
233 234 5.421056 TCCTTCTACTAATGGAATGTGACGT 59.579 40.000 0.00 0.00 0.00 4.34
234 235 5.902681 TCCTTCTACTAATGGAATGTGACG 58.097 41.667 0.00 0.00 0.00 4.35
235 236 6.539103 GGTTCCTTCTACTAATGGAATGTGAC 59.461 42.308 0.00 0.00 40.20 3.67
236 237 6.352737 GGGTTCCTTCTACTAATGGAATGTGA 60.353 42.308 0.00 0.00 40.20 3.58
237 238 5.823045 GGGTTCCTTCTACTAATGGAATGTG 59.177 44.000 0.00 0.00 40.20 3.21
238 239 5.104067 GGGGTTCCTTCTACTAATGGAATGT 60.104 44.000 0.00 0.00 40.20 2.71
239 240 5.377478 GGGGTTCCTTCTACTAATGGAATG 58.623 45.833 0.00 0.00 40.20 2.67
240 241 4.415846 GGGGGTTCCTTCTACTAATGGAAT 59.584 45.833 0.00 0.00 40.20 3.01
241 242 3.784202 GGGGGTTCCTTCTACTAATGGAA 59.216 47.826 0.00 0.00 36.37 3.53
242 243 3.014807 AGGGGGTTCCTTCTACTAATGGA 59.985 47.826 0.00 0.00 45.47 3.41
243 244 3.394645 AGGGGGTTCCTTCTACTAATGG 58.605 50.000 0.00 0.00 45.47 3.16
273 274 3.869473 TTCGGGAAAGGTGCGACGG 62.869 63.158 0.00 0.00 0.00 4.79
274 275 1.296056 AATTCGGGAAAGGTGCGACG 61.296 55.000 0.00 0.00 0.00 5.12
275 276 1.395954 GTAATTCGGGAAAGGTGCGAC 59.604 52.381 0.00 0.00 0.00 5.19
276 277 1.276989 AGTAATTCGGGAAAGGTGCGA 59.723 47.619 0.00 0.00 0.00 5.10
277 278 1.734163 AGTAATTCGGGAAAGGTGCG 58.266 50.000 0.00 0.00 0.00 5.34
278 279 3.078837 TGAAGTAATTCGGGAAAGGTGC 58.921 45.455 0.00 0.00 0.00 5.01
279 280 3.127030 GCTGAAGTAATTCGGGAAAGGTG 59.873 47.826 13.28 0.00 0.00 4.00
280 281 3.009143 AGCTGAAGTAATTCGGGAAAGGT 59.991 43.478 13.28 0.51 0.00 3.50
281 282 3.610911 AGCTGAAGTAATTCGGGAAAGG 58.389 45.455 13.28 0.00 0.00 3.11
282 283 4.253685 TGAGCTGAAGTAATTCGGGAAAG 58.746 43.478 13.28 0.00 0.00 2.62
283 284 4.280436 TGAGCTGAAGTAATTCGGGAAA 57.720 40.909 13.28 0.00 0.00 3.13
284 285 3.973206 TGAGCTGAAGTAATTCGGGAA 57.027 42.857 13.28 0.00 0.00 3.97
285 286 3.007506 TGTTGAGCTGAAGTAATTCGGGA 59.992 43.478 13.28 0.00 0.00 5.14
286 287 3.125316 GTGTTGAGCTGAAGTAATTCGGG 59.875 47.826 13.28 3.04 0.00 5.14
287 288 3.181530 CGTGTTGAGCTGAAGTAATTCGG 60.182 47.826 7.38 7.38 0.00 4.30
288 289 3.181530 CCGTGTTGAGCTGAAGTAATTCG 60.182 47.826 0.00 0.00 0.00 3.34
289 290 3.994392 TCCGTGTTGAGCTGAAGTAATTC 59.006 43.478 0.00 0.00 0.00 2.17
290 291 4.002906 TCCGTGTTGAGCTGAAGTAATT 57.997 40.909 0.00 0.00 0.00 1.40
291 292 3.678056 TCCGTGTTGAGCTGAAGTAAT 57.322 42.857 0.00 0.00 0.00 1.89
292 293 3.462483 TTCCGTGTTGAGCTGAAGTAA 57.538 42.857 0.00 0.00 0.00 2.24
293 294 3.069016 TCTTTCCGTGTTGAGCTGAAGTA 59.931 43.478 0.00 0.00 0.00 2.24
294 295 2.158957 TCTTTCCGTGTTGAGCTGAAGT 60.159 45.455 0.00 0.00 0.00 3.01
295 296 2.221981 GTCTTTCCGTGTTGAGCTGAAG 59.778 50.000 0.00 0.00 0.00 3.02
296 297 2.210116 GTCTTTCCGTGTTGAGCTGAA 58.790 47.619 0.00 0.00 0.00 3.02
297 298 1.865865 GTCTTTCCGTGTTGAGCTGA 58.134 50.000 0.00 0.00 0.00 4.26
298 299 0.508641 CGTCTTTCCGTGTTGAGCTG 59.491 55.000 0.00 0.00 0.00 4.24
299 300 0.387929 TCGTCTTTCCGTGTTGAGCT 59.612 50.000 0.00 0.00 0.00 4.09
300 301 1.192534 CTTCGTCTTTCCGTGTTGAGC 59.807 52.381 0.00 0.00 0.00 4.26
301 302 2.726760 CTCTTCGTCTTTCCGTGTTGAG 59.273 50.000 0.00 0.00 0.00 3.02
302 303 2.545113 CCTCTTCGTCTTTCCGTGTTGA 60.545 50.000 0.00 0.00 0.00 3.18
303 304 1.792949 CCTCTTCGTCTTTCCGTGTTG 59.207 52.381 0.00 0.00 0.00 3.33
304 305 1.684983 TCCTCTTCGTCTTTCCGTGTT 59.315 47.619 0.00 0.00 0.00 3.32
305 306 1.325355 TCCTCTTCGTCTTTCCGTGT 58.675 50.000 0.00 0.00 0.00 4.49
306 307 2.433868 TTCCTCTTCGTCTTTCCGTG 57.566 50.000 0.00 0.00 0.00 4.94
307 308 3.181468 ACTTTTCCTCTTCGTCTTTCCGT 60.181 43.478 0.00 0.00 0.00 4.69
308 309 3.391049 ACTTTTCCTCTTCGTCTTTCCG 58.609 45.455 0.00 0.00 0.00 4.30
309 310 4.377897 TGACTTTTCCTCTTCGTCTTTCC 58.622 43.478 0.00 0.00 0.00 3.13
310 311 4.084276 GCTGACTTTTCCTCTTCGTCTTTC 60.084 45.833 0.00 0.00 0.00 2.62
311 312 3.810386 GCTGACTTTTCCTCTTCGTCTTT 59.190 43.478 0.00 0.00 0.00 2.52
312 313 3.070302 AGCTGACTTTTCCTCTTCGTCTT 59.930 43.478 0.00 0.00 0.00 3.01
313 314 2.630580 AGCTGACTTTTCCTCTTCGTCT 59.369 45.455 0.00 0.00 0.00 4.18
314 315 3.033368 AGCTGACTTTTCCTCTTCGTC 57.967 47.619 0.00 0.00 0.00 4.20
315 316 3.070302 AGAAGCTGACTTTTCCTCTTCGT 59.930 43.478 0.00 0.00 35.82 3.85
316 317 3.658709 AGAAGCTGACTTTTCCTCTTCG 58.341 45.455 0.00 0.00 35.82 3.79
317 318 5.049749 GTGAAGAAGCTGACTTTTCCTCTTC 60.050 44.000 10.65 10.65 35.82 2.87
318 319 4.819088 GTGAAGAAGCTGACTTTTCCTCTT 59.181 41.667 7.65 0.20 35.82 2.85
319 320 4.384940 GTGAAGAAGCTGACTTTTCCTCT 58.615 43.478 7.65 0.00 35.82 3.69
320 321 3.500299 GGTGAAGAAGCTGACTTTTCCTC 59.500 47.826 7.65 0.00 35.82 3.71
321 322 3.137360 AGGTGAAGAAGCTGACTTTTCCT 59.863 43.478 16.55 16.55 35.82 3.36
322 323 3.481453 AGGTGAAGAAGCTGACTTTTCC 58.519 45.455 7.65 11.53 35.82 3.13
323 324 3.185391 CGAGGTGAAGAAGCTGACTTTTC 59.815 47.826 7.65 5.00 36.52 2.29
324 325 3.134458 CGAGGTGAAGAAGCTGACTTTT 58.866 45.455 7.65 0.00 36.52 2.27
325 326 2.760374 CGAGGTGAAGAAGCTGACTTT 58.240 47.619 7.65 0.00 36.52 2.66
326 327 1.606737 GCGAGGTGAAGAAGCTGACTT 60.607 52.381 6.19 6.19 36.52 3.01
327 328 0.037790 GCGAGGTGAAGAAGCTGACT 60.038 55.000 0.00 0.00 36.52 3.41
328 329 1.347817 CGCGAGGTGAAGAAGCTGAC 61.348 60.000 0.00 0.00 36.52 3.51
329 330 1.080501 CGCGAGGTGAAGAAGCTGA 60.081 57.895 0.00 0.00 36.52 4.26
330 331 0.109272 TACGCGAGGTGAAGAAGCTG 60.109 55.000 15.93 0.00 36.52 4.24
331 332 0.818296 ATACGCGAGGTGAAGAAGCT 59.182 50.000 15.93 0.00 40.07 3.74
332 333 1.588861 GAATACGCGAGGTGAAGAAGC 59.411 52.381 15.93 0.00 0.00 3.86
333 334 2.876091 TGAATACGCGAGGTGAAGAAG 58.124 47.619 15.93 0.00 0.00 2.85
334 335 3.306917 TTGAATACGCGAGGTGAAGAA 57.693 42.857 15.93 0.00 0.00 2.52
335 336 3.520290 ATTGAATACGCGAGGTGAAGA 57.480 42.857 15.93 0.00 0.00 2.87
336 337 3.370978 ACAATTGAATACGCGAGGTGAAG 59.629 43.478 15.93 0.00 0.00 3.02
337 338 3.331150 ACAATTGAATACGCGAGGTGAA 58.669 40.909 15.93 0.00 0.00 3.18
338 339 2.967362 ACAATTGAATACGCGAGGTGA 58.033 42.857 15.93 0.00 0.00 4.02
339 340 3.124466 TGAACAATTGAATACGCGAGGTG 59.876 43.478 15.93 1.35 0.00 4.00
340 341 3.124636 GTGAACAATTGAATACGCGAGGT 59.875 43.478 15.93 0.00 0.00 3.85
341 342 3.485216 GGTGAACAATTGAATACGCGAGG 60.485 47.826 15.93 0.00 0.00 4.63
342 343 3.670203 GGTGAACAATTGAATACGCGAG 58.330 45.455 15.93 0.00 0.00 5.03
343 344 2.092995 CGGTGAACAATTGAATACGCGA 59.907 45.455 15.93 0.00 0.00 5.87
344 345 2.159761 ACGGTGAACAATTGAATACGCG 60.160 45.455 13.59 3.53 0.00 6.01
345 346 3.465122 ACGGTGAACAATTGAATACGC 57.535 42.857 13.59 6.68 0.00 4.42
346 347 4.079028 CGAACGGTGAACAATTGAATACG 58.921 43.478 13.59 11.80 0.00 3.06
347 348 4.399978 CCGAACGGTGAACAATTGAATAC 58.600 43.478 13.59 7.25 0.00 1.89
348 349 3.120130 GCCGAACGGTGAACAATTGAATA 60.120 43.478 13.59 0.00 37.65 1.75
349 350 2.351350 GCCGAACGGTGAACAATTGAAT 60.351 45.455 13.59 0.00 37.65 2.57
350 351 1.002251 GCCGAACGGTGAACAATTGAA 60.002 47.619 13.59 0.00 37.65 2.69
351 352 0.589223 GCCGAACGGTGAACAATTGA 59.411 50.000 13.59 0.00 37.65 2.57
352 353 0.309302 TGCCGAACGGTGAACAATTG 59.691 50.000 14.63 3.24 37.65 2.32
353 354 0.591170 CTGCCGAACGGTGAACAATT 59.409 50.000 14.63 0.00 37.65 2.32
354 355 0.250124 TCTGCCGAACGGTGAACAAT 60.250 50.000 14.63 0.00 37.65 2.71
355 356 0.878523 CTCTGCCGAACGGTGAACAA 60.879 55.000 14.63 0.00 37.65 2.83
356 357 1.300620 CTCTGCCGAACGGTGAACA 60.301 57.895 14.63 3.48 37.65 3.18
357 358 0.599204 TTCTCTGCCGAACGGTGAAC 60.599 55.000 14.63 0.00 33.33 3.18
358 359 0.320374 ATTCTCTGCCGAACGGTGAA 59.680 50.000 14.63 13.08 40.45 3.18
359 360 0.108804 GATTCTCTGCCGAACGGTGA 60.109 55.000 14.63 11.70 37.65 4.02
360 361 1.084370 GGATTCTCTGCCGAACGGTG 61.084 60.000 14.63 8.28 37.65 4.94
361 362 1.218316 GGATTCTCTGCCGAACGGT 59.782 57.895 14.63 0.00 37.65 4.83
362 363 0.179073 ATGGATTCTCTGCCGAACGG 60.179 55.000 9.00 9.00 38.57 4.44
363 364 2.509052 TATGGATTCTCTGCCGAACG 57.491 50.000 0.00 0.00 0.00 3.95
364 365 3.244215 TGGATATGGATTCTCTGCCGAAC 60.244 47.826 0.00 0.00 0.00 3.95
365 366 2.972021 TGGATATGGATTCTCTGCCGAA 59.028 45.455 0.00 0.00 0.00 4.30
366 367 2.608623 TGGATATGGATTCTCTGCCGA 58.391 47.619 0.00 0.00 0.00 5.54
367 368 3.623906 ATGGATATGGATTCTCTGCCG 57.376 47.619 0.00 0.00 0.00 5.69
368 369 6.244552 TGATATGGATATGGATTCTCTGCC 57.755 41.667 0.00 0.00 0.00 4.85
369 370 7.444792 GGATTGATATGGATATGGATTCTCTGC 59.555 40.741 0.00 0.00 0.00 4.26
370 371 7.937942 GGGATTGATATGGATATGGATTCTCTG 59.062 40.741 0.00 0.00 0.00 3.35
371 372 7.630534 TGGGATTGATATGGATATGGATTCTCT 59.369 37.037 0.00 0.00 0.00 3.10
372 373 7.809238 TGGGATTGATATGGATATGGATTCTC 58.191 38.462 0.00 0.00 0.00 2.87
373 374 7.776291 TGGGATTGATATGGATATGGATTCT 57.224 36.000 0.00 0.00 0.00 2.40
374 375 7.504911 CCTTGGGATTGATATGGATATGGATTC 59.495 40.741 0.00 0.00 0.00 2.52
375 376 7.359849 CCTTGGGATTGATATGGATATGGATT 58.640 38.462 0.00 0.00 0.00 3.01
376 377 6.125979 CCCTTGGGATTGATATGGATATGGAT 60.126 42.308 0.00 0.00 0.00 3.41
377 378 5.194334 CCCTTGGGATTGATATGGATATGGA 59.806 44.000 0.00 0.00 0.00 3.41
378 379 5.194334 TCCCTTGGGATTGATATGGATATGG 59.806 44.000 3.91 0.00 0.00 2.74
379 380 6.331577 TCCCTTGGGATTGATATGGATATG 57.668 41.667 3.91 0.00 0.00 1.78
380 381 6.684243 TCATCCCTTGGGATTGATATGGATAT 59.316 38.462 17.95 0.00 30.48 1.63
381 382 6.037949 TCATCCCTTGGGATTGATATGGATA 58.962 40.000 17.95 0.00 30.48 2.59
382 383 4.859691 TCATCCCTTGGGATTGATATGGAT 59.140 41.667 17.95 0.00 0.00 3.41
383 384 4.250329 TCATCCCTTGGGATTGATATGGA 58.750 43.478 17.95 8.23 0.00 3.41
384 385 4.597004 CTCATCCCTTGGGATTGATATGG 58.403 47.826 17.95 6.10 0.00 2.74
385 386 4.015084 GCTCATCCCTTGGGATTGATATG 58.985 47.826 17.95 8.23 0.00 1.78
386 387 3.921486 AGCTCATCCCTTGGGATTGATAT 59.079 43.478 17.95 8.27 0.00 1.63
387 388 3.328931 GAGCTCATCCCTTGGGATTGATA 59.671 47.826 17.95 4.46 0.00 2.15
388 389 2.107901 GAGCTCATCCCTTGGGATTGAT 59.892 50.000 17.95 12.55 0.00 2.57
389 390 1.492176 GAGCTCATCCCTTGGGATTGA 59.508 52.381 17.95 16.23 0.00 2.57
553 579 1.754234 ATCCCTTCCCAACGCATGC 60.754 57.895 7.91 7.91 0.00 4.06
679 705 0.614697 TGGCGTGGGAGAGATCTTCA 60.615 55.000 0.00 0.00 0.00 3.02
1051 1080 1.183030 TCGTCCCCATTGACAGTCGT 61.183 55.000 0.00 0.00 34.88 4.34
1052 1081 0.736325 GTCGTCCCCATTGACAGTCG 60.736 60.000 0.00 0.00 34.88 4.18
1053 1082 0.736325 CGTCGTCCCCATTGACAGTC 60.736 60.000 0.00 0.00 34.88 3.51
1054 1083 1.292223 CGTCGTCCCCATTGACAGT 59.708 57.895 0.00 0.00 34.88 3.55
1239 1278 1.955778 CAACCCTCATTTGTGTCTGCA 59.044 47.619 0.00 0.00 0.00 4.41
1840 1893 3.653352 GGGGAGAAGGAGCCATATAACTT 59.347 47.826 0.00 0.00 0.00 2.66
1882 1935 2.210711 GGGAGGTAGGCATCGAGGG 61.211 68.421 0.00 0.00 0.00 4.30
2326 2398 7.781324 ATTAAGAAGAAGAGAATTGCCCAAA 57.219 32.000 0.00 0.00 0.00 3.28
2405 2482 4.988486 GTCGGCGACACGAACGGT 62.988 66.667 33.07 0.00 45.38 4.83
2409 2486 2.718747 AATTGGGTCGGCGACACGAA 62.719 55.000 37.13 29.08 45.38 3.85
2410 2487 1.875420 TAATTGGGTCGGCGACACGA 61.875 55.000 37.13 34.80 39.08 4.35
2411 2488 1.015085 TTAATTGGGTCGGCGACACG 61.015 55.000 37.13 0.00 39.08 4.49
2412 2489 0.725117 CTTAATTGGGTCGGCGACAC 59.275 55.000 37.13 35.58 36.36 3.67
2413 2490 0.391927 CCTTAATTGGGTCGGCGACA 60.392 55.000 37.13 20.65 33.68 4.35
2414 2491 1.093496 CCCTTAATTGGGTCGGCGAC 61.093 60.000 30.72 30.72 42.25 5.19
2415 2492 1.222387 CCCTTAATTGGGTCGGCGA 59.778 57.895 4.99 4.99 42.25 5.54
2416 2493 3.821995 CCCTTAATTGGGTCGGCG 58.178 61.111 0.00 0.00 42.25 6.46
2423 2500 5.418310 CAATACGTGCTACCCTTAATTGG 57.582 43.478 0.00 0.00 0.00 3.16
2437 2514 3.738286 TGTATGTGCAAGCAATACGTG 57.262 42.857 0.00 0.00 0.00 4.49
2438 2515 4.472286 GTTTGTATGTGCAAGCAATACGT 58.528 39.130 15.66 0.00 31.32 3.57
2439 2516 3.538003 CGTTTGTATGTGCAAGCAATACG 59.462 43.478 15.66 1.94 31.32 3.06
2440 2517 3.300590 GCGTTTGTATGTGCAAGCAATAC 59.699 43.478 14.69 14.69 31.32 1.89
2441 2518 3.057946 TGCGTTTGTATGTGCAAGCAATA 60.058 39.130 0.00 0.00 33.80 1.90
2442 2519 2.288091 TGCGTTTGTATGTGCAAGCAAT 60.288 40.909 0.00 0.00 33.80 3.56
2443 2520 1.066152 TGCGTTTGTATGTGCAAGCAA 59.934 42.857 0.00 0.00 33.80 3.91
2444 2521 0.665298 TGCGTTTGTATGTGCAAGCA 59.335 45.000 0.00 0.00 33.80 3.91
2445 2522 1.913403 GATGCGTTTGTATGTGCAAGC 59.087 47.619 0.00 0.00 41.22 4.01
2446 2523 2.095314 TGGATGCGTTTGTATGTGCAAG 60.095 45.455 0.00 0.00 41.22 4.01
2447 2524 1.882623 TGGATGCGTTTGTATGTGCAA 59.117 42.857 0.00 0.00 41.22 4.08
2448 2525 1.468127 CTGGATGCGTTTGTATGTGCA 59.532 47.619 0.00 0.00 42.22 4.57
2449 2526 1.468520 ACTGGATGCGTTTGTATGTGC 59.531 47.619 0.00 0.00 0.00 4.57
2450 2527 2.728846 GCACTGGATGCGTTTGTATGTG 60.729 50.000 0.00 0.00 46.55 3.21
2451 2528 1.468520 GCACTGGATGCGTTTGTATGT 59.531 47.619 0.00 0.00 46.55 2.29
2452 2529 2.178474 GCACTGGATGCGTTTGTATG 57.822 50.000 0.00 0.00 46.55 2.39
2467 2544 0.767375 ACAGACACAATCCAGGCACT 59.233 50.000 0.00 0.00 43.88 4.40
2468 2545 0.877071 CACAGACACAATCCAGGCAC 59.123 55.000 0.00 0.00 0.00 5.01
2469 2546 0.764271 TCACAGACACAATCCAGGCA 59.236 50.000 0.00 0.00 0.00 4.75
2470 2547 1.808945 CTTCACAGACACAATCCAGGC 59.191 52.381 0.00 0.00 0.00 4.85
2471 2548 3.070018 GACTTCACAGACACAATCCAGG 58.930 50.000 0.00 0.00 0.00 4.45
2472 2549 3.744942 CAGACTTCACAGACACAATCCAG 59.255 47.826 0.00 0.00 0.00 3.86
2473 2550 3.387699 TCAGACTTCACAGACACAATCCA 59.612 43.478 0.00 0.00 0.00 3.41
2474 2551 3.743396 GTCAGACTTCACAGACACAATCC 59.257 47.826 0.00 0.00 0.00 3.01
2475 2552 4.626042 AGTCAGACTTCACAGACACAATC 58.374 43.478 0.00 0.00 33.56 2.67
2476 2553 4.679373 AGTCAGACTTCACAGACACAAT 57.321 40.909 0.00 0.00 33.56 2.71
2477 2554 4.471904 AAGTCAGACTTCACAGACACAA 57.528 40.909 10.27 0.00 31.77 3.33
2487 2564 7.064728 GTTGGTTACCATATGAAGTCAGACTTC 59.935 40.741 29.62 29.62 43.15 3.01
2488 2565 6.620877 TGGTTACCATATGAAGTCAGACTT 57.379 37.500 16.11 16.11 41.95 3.01
2489 2566 6.407202 GTTGGTTACCATATGAAGTCAGACT 58.593 40.000 4.38 0.00 31.53 3.24
2490 2567 5.291128 CGTTGGTTACCATATGAAGTCAGAC 59.709 44.000 4.38 0.00 31.53 3.51
2491 2568 5.416083 CGTTGGTTACCATATGAAGTCAGA 58.584 41.667 4.38 0.00 31.53 3.27
2492 2569 4.034048 GCGTTGGTTACCATATGAAGTCAG 59.966 45.833 4.38 0.00 31.53 3.51
2493 2570 3.936453 GCGTTGGTTACCATATGAAGTCA 59.064 43.478 4.38 0.00 31.53 3.41
2494 2571 3.936453 TGCGTTGGTTACCATATGAAGTC 59.064 43.478 4.38 0.00 31.53 3.01
2495 2572 3.945346 TGCGTTGGTTACCATATGAAGT 58.055 40.909 4.38 0.00 31.53 3.01
2496 2573 4.955925 TTGCGTTGGTTACCATATGAAG 57.044 40.909 4.38 0.00 31.53 3.02
2497 2574 4.762765 ACTTTGCGTTGGTTACCATATGAA 59.237 37.500 4.38 0.00 31.53 2.57
2498 2575 4.328536 ACTTTGCGTTGGTTACCATATGA 58.671 39.130 4.38 0.00 31.53 2.15
2499 2576 4.695217 ACTTTGCGTTGGTTACCATATG 57.305 40.909 4.38 3.36 31.53 1.78
2542 2619 5.111293 ACAAAAGCTGTTTGGAATTGTCTG 58.889 37.500 18.96 0.00 32.99 3.51
2559 2636 8.592105 TCAATCAGGATAAGCAAAAACAAAAG 57.408 30.769 0.00 0.00 0.00 2.27
2583 2660 5.037385 GGACAGCACAAGAAAGAAAAACTC 58.963 41.667 0.00 0.00 0.00 3.01
2618 2699 6.123651 ACTCGCTATATGGAAGTCCTATAGG 58.876 44.000 13.07 13.07 34.22 2.57
2627 2713 4.855715 TCAGGAACTCGCTATATGGAAG 57.144 45.455 0.00 0.00 34.60 3.46
2628 2714 6.246163 TCTATCAGGAACTCGCTATATGGAA 58.754 40.000 0.00 0.00 34.60 3.53
2631 2717 6.426327 CGATCTATCAGGAACTCGCTATATG 58.574 44.000 0.00 0.00 34.60 1.78
2645 2731 0.312102 TGTGCTCGCCGATCTATCAG 59.688 55.000 0.00 0.00 0.00 2.90
2687 2773 5.178438 CGAGCTAGCCTTCAGAAATATTTCC 59.822 44.000 21.86 7.91 37.92 3.13
2699 2785 1.064952 GACACTCTCGAGCTAGCCTTC 59.935 57.143 12.13 2.05 0.00 3.46
2712 2798 0.960861 TCCATCTGACGCGACACTCT 60.961 55.000 15.93 0.00 0.00 3.24
2720 2806 3.567797 GCCGCTTCCATCTGACGC 61.568 66.667 0.00 0.00 35.01 5.19
2721 2807 2.125552 TGCCGCTTCCATCTGACG 60.126 61.111 0.00 0.00 0.00 4.35
2722 2808 0.179062 ATCTGCCGCTTCCATCTGAC 60.179 55.000 0.00 0.00 0.00 3.51
2723 2809 0.179065 CATCTGCCGCTTCCATCTGA 60.179 55.000 0.00 0.00 0.00 3.27
2724 2810 0.179065 TCATCTGCCGCTTCCATCTG 60.179 55.000 0.00 0.00 0.00 2.90
2735 2821 4.925861 GGCCGCTCCTCATCTGCC 62.926 72.222 0.00 0.00 0.00 4.85
2800 2890 2.941720 GGATCATTGTTCAGCAGAGGAC 59.058 50.000 0.00 0.00 0.00 3.85
2814 2904 3.110705 ACAGTAGACAGCAGGGATCATT 58.889 45.455 0.00 0.00 0.00 2.57
2817 2907 3.556999 TCTACAGTAGACAGCAGGGATC 58.443 50.000 6.15 0.00 0.00 3.36
2831 2921 9.201989 TCCACACTATAGAATGAAATCTACAGT 57.798 33.333 6.78 0.00 39.61 3.55
2840 2930 8.956426 GTTTCCAATTCCACACTATAGAATGAA 58.044 33.333 6.78 4.27 30.80 2.57
2841 2931 7.556275 GGTTTCCAATTCCACACTATAGAATGA 59.444 37.037 6.78 0.00 30.80 2.57
2845 2935 6.381498 TGGTTTCCAATTCCACACTATAGA 57.619 37.500 6.78 0.00 0.00 1.98
2863 2953 9.777297 AACAAATGCAGATACTAAAATTGGTTT 57.223 25.926 0.00 0.00 0.00 3.27
2864 2954 9.206870 CAACAAATGCAGATACTAAAATTGGTT 57.793 29.630 0.00 0.00 0.00 3.67
2866 2956 8.761575 ACAACAAATGCAGATACTAAAATTGG 57.238 30.769 0.00 0.00 0.00 3.16
2870 2961 8.081633 CCTGAACAACAAATGCAGATACTAAAA 58.918 33.333 0.00 0.00 0.00 1.52
2877 3018 3.058016 CGTCCTGAACAACAAATGCAGAT 60.058 43.478 0.00 0.00 0.00 2.90
2901 3042 5.111989 CCATCACTCGTGTATCTTGAACAT 58.888 41.667 0.00 0.00 0.00 2.71
2916 3057 4.701765 AGATATCAACTGTGCCATCACTC 58.298 43.478 5.32 0.00 43.49 3.51
2925 3066 5.046529 GGCTGTCTGTAGATATCAACTGTG 58.953 45.833 5.32 0.00 0.00 3.66
2960 3101 2.281484 TCCAGTTGCCGGTGCTTC 60.281 61.111 1.90 0.00 38.71 3.86
2961 3102 2.281761 CTCCAGTTGCCGGTGCTT 60.282 61.111 1.90 0.00 38.71 3.91
2997 3138 5.114780 TGTTTGTAACTTTACGCAGTACCA 58.885 37.500 0.00 0.00 45.76 3.25
3007 3148 7.885922 TGGAGGAAGCATATGTTTGTAACTTTA 59.114 33.333 9.76 0.00 0.00 1.85
3009 3150 6.245408 TGGAGGAAGCATATGTTTGTAACTT 58.755 36.000 9.76 0.00 0.00 2.66
3014 3155 3.019564 GCTGGAGGAAGCATATGTTTGT 58.980 45.455 9.76 0.00 43.01 2.83
3015 3156 3.285484 AGCTGGAGGAAGCATATGTTTG 58.715 45.455 9.76 0.00 46.08 2.93
3016 3157 3.659183 AGCTGGAGGAAGCATATGTTT 57.341 42.857 4.27 4.27 46.08 2.83
3021 3162 2.681976 GCAAGAAGCTGGAGGAAGCATA 60.682 50.000 0.00 0.00 46.08 3.14
3022 3163 1.954258 GCAAGAAGCTGGAGGAAGCAT 60.954 52.381 0.00 0.00 46.08 3.79
3023 3164 0.607489 GCAAGAAGCTGGAGGAAGCA 60.607 55.000 0.00 0.00 46.08 3.91
3024 3165 1.642952 CGCAAGAAGCTGGAGGAAGC 61.643 60.000 0.00 0.00 42.61 3.86
3025 3166 1.642952 GCGCAAGAAGCTGGAGGAAG 61.643 60.000 0.30 0.00 42.61 3.46
3027 3168 2.046892 GCGCAAGAAGCTGGAGGA 60.047 61.111 0.30 0.00 42.61 3.71
3028 3169 3.130160 GGCGCAAGAAGCTGGAGG 61.130 66.667 10.83 0.00 42.61 4.30
3029 3170 1.239968 AAAGGCGCAAGAAGCTGGAG 61.240 55.000 10.83 0.00 42.61 3.86
3030 3171 1.228245 AAAGGCGCAAGAAGCTGGA 60.228 52.632 10.83 0.00 42.61 3.86
3031 3172 1.211190 GAAAGGCGCAAGAAGCTGG 59.789 57.895 10.83 0.00 42.61 4.85
3032 3173 0.595095 AAGAAAGGCGCAAGAAGCTG 59.405 50.000 10.83 0.00 42.61 4.24
3033 3174 0.877743 GAAGAAAGGCGCAAGAAGCT 59.122 50.000 10.83 0.00 42.61 3.74
3069 3210 1.739562 CTGAACTCGGCACCTGAGC 60.740 63.158 1.11 0.00 36.94 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.