Multiple sequence alignment - TraesCS7D01G375500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G375500 chr7D 100.000 6214 0 0 1 6214 485824176 485830389 0.000000e+00 11476.0
1 TraesCS7D01G375500 chr7D 74.747 594 103 24 191 756 44254192 44254766 8.110000e-54 222.0
2 TraesCS7D01G375500 chr7D 99.138 116 0 1 5839 5953 485829900 485830015 2.270000e-49 207.0
3 TraesCS7D01G375500 chr7D 99.138 116 0 1 5725 5840 485830014 485830128 2.270000e-49 207.0
4 TraesCS7D01G375500 chr7D 76.093 389 72 14 375 756 44030084 44030458 3.830000e-42 183.0
5 TraesCS7D01G375500 chr7A 95.256 2656 73 21 2863 5488 554383409 554386041 0.000000e+00 4157.0
6 TraesCS7D01G375500 chr7A 91.698 2120 116 26 257 2358 554380046 554382123 0.000000e+00 2885.0
7 TraesCS7D01G375500 chr7A 98.643 516 5 2 2356 2871 554382511 554383024 0.000000e+00 913.0
8 TraesCS7D01G375500 chr7A 74.155 592 111 26 191 756 46678560 46679135 2.270000e-49 207.0
9 TraesCS7D01G375500 chr7A 77.135 363 66 12 399 756 46625459 46625809 1.770000e-45 195.0
10 TraesCS7D01G375500 chr7A 92.105 114 9 0 5552 5665 554386150 554386263 1.790000e-35 161.0
11 TraesCS7D01G375500 chr7B 89.258 3165 237 53 1 3146 513645247 513648327 0.000000e+00 3866.0
12 TraesCS7D01G375500 chr7B 89.331 2437 125 46 3149 5535 513648357 513650708 0.000000e+00 2935.0
13 TraesCS7D01G375500 chr7B 81.702 235 31 9 133 364 504867821 504868046 1.060000e-42 185.0
14 TraesCS7D01G375500 chr7B 93.600 125 6 2 5552 5675 513650776 513650899 1.060000e-42 185.0
15 TraesCS7D01G375500 chr7B 82.039 206 33 4 3306 3510 743560386 743560588 8.280000e-39 172.0
16 TraesCS7D01G375500 chr7B 97.436 39 0 1 5797 5834 658119236 658119274 1.450000e-06 65.8
17 TraesCS7D01G375500 chr7B 97.436 39 0 1 5910 5947 658119236 658119274 1.450000e-06 65.8
18 TraesCS7D01G375500 chr5D 83.016 630 82 13 147 756 498464504 498465128 1.180000e-151 547.0
19 TraesCS7D01G375500 chr5D 79.841 630 86 21 152 759 295080375 295079765 7.450000e-114 422.0
20 TraesCS7D01G375500 chr4A 81.607 647 74 23 134 756 578106098 578106723 1.560000e-135 494.0
21 TraesCS7D01G375500 chr4A 75.703 391 69 17 375 756 655075986 655076359 8.280000e-39 172.0
22 TraesCS7D01G375500 chr4A 77.872 235 24 14 5953 6177 621852138 621852354 3.040000e-23 121.0
23 TraesCS7D01G375500 chr4A 90.123 81 6 2 3307 3386 733033064 733032985 3.060000e-18 104.0
24 TraesCS7D01G375500 chr4A 90.123 81 6 2 3307 3386 733092344 733092265 3.060000e-18 104.0
25 TraesCS7D01G375500 chr4A 90.123 81 6 2 3307 3386 733164979 733164900 3.060000e-18 104.0
26 TraesCS7D01G375500 chr4A 90.123 81 6 2 3307 3386 733189785 733189706 3.060000e-18 104.0
27 TraesCS7D01G375500 chr4A 90.123 81 6 2 3307 3386 733215570 733215491 3.060000e-18 104.0
28 TraesCS7D01G375500 chr4A 88.158 76 8 1 3301 3376 733302735 733302661 8.580000e-14 89.8
29 TraesCS7D01G375500 chr4A 85.507 69 3 5 6108 6174 611034889 611034826 1.450000e-06 65.8
30 TraesCS7D01G375500 chr4A 100.000 28 0 0 5850 5877 86303216 86303189 1.100000e-02 52.8
31 TraesCS7D01G375500 chr4A 100.000 28 0 0 5737 5764 86303216 86303189 1.100000e-02 52.8
32 TraesCS7D01G375500 chr1D 82.131 582 76 13 201 758 272536467 272535890 2.030000e-129 473.0
33 TraesCS7D01G375500 chr1D 80.776 593 89 13 188 758 444845179 444844590 2.060000e-119 440.0
34 TraesCS7D01G375500 chr1D 81.703 552 77 4 216 744 409762801 409762251 7.400000e-119 438.0
35 TraesCS7D01G375500 chr1D 81.197 117 13 7 6057 6168 435360948 435360836 1.110000e-12 86.1
36 TraesCS7D01G375500 chr1D 100.000 35 0 0 5797 5831 389802242 389802276 1.450000e-06 65.8
37 TraesCS7D01G375500 chr1D 100.000 35 0 0 5910 5944 389802242 389802276 1.450000e-06 65.8
38 TraesCS7D01G375500 chr1D 100.000 29 0 0 5852 5880 339365014 339364986 3.000000e-03 54.7
39 TraesCS7D01G375500 chr1D 100.000 29 0 0 5739 5767 339365014 339364986 3.000000e-03 54.7
40 TraesCS7D01G375500 chr6A 81.049 591 80 15 191 756 608656588 608656005 5.720000e-120 442.0
41 TraesCS7D01G375500 chr6A 83.673 392 55 5 369 756 597317346 597317732 1.650000e-95 361.0
42 TraesCS7D01G375500 chr6A 93.478 46 2 1 5797 5842 562484635 562484591 4.020000e-07 67.6
43 TraesCS7D01G375500 chr6A 97.436 39 1 0 5910 5948 562484635 562484597 4.020000e-07 67.6
44 TraesCS7D01G375500 chr1B 81.835 545 79 6 230 757 433138694 433138153 2.060000e-119 440.0
45 TraesCS7D01G375500 chr1B 97.436 39 0 1 5910 5947 581315294 581315256 1.450000e-06 65.8
46 TraesCS7D01G375500 chr5B 80.063 632 87 16 134 742 679666167 679666782 3.440000e-117 433.0
47 TraesCS7D01G375500 chr5B 74.641 627 104 26 147 742 319815520 319814918 6.270000e-55 226.0
48 TraesCS7D01G375500 chr5B 81.481 135 17 6 6043 6173 98836060 98836190 3.060000e-18 104.0
49 TraesCS7D01G375500 chr6D 79.567 646 98 15 134 756 407203330 407203964 1.240000e-116 431.0
50 TraesCS7D01G375500 chr2D 80.656 579 85 12 188 742 131775066 131775641 2.070000e-114 424.0
51 TraesCS7D01G375500 chr2D 82.821 390 55 6 375 756 85861465 85861850 7.720000e-89 339.0
52 TraesCS7D01G375500 chr2D 93.478 46 2 1 5797 5842 72155785 72155741 4.020000e-07 67.6
53 TraesCS7D01G375500 chr2D 97.436 39 1 0 5910 5948 72155785 72155747 4.020000e-07 67.6
54 TraesCS7D01G375500 chr2B 78.710 310 52 10 476 779 621780695 621780394 1.770000e-45 195.0
55 TraesCS7D01G375500 chr2B 80.672 119 13 7 6054 6168 462729021 462729133 3.990000e-12 84.2
56 TraesCS7D01G375500 chr2B 100.000 28 0 0 5740 5767 52684685 52684712 1.100000e-02 52.8
57 TraesCS7D01G375500 chr2B 100.000 28 0 0 5853 5880 52684685 52684712 1.100000e-02 52.8
58 TraesCS7D01G375500 chr2A 80.859 256 37 8 525 776 422787405 422787158 2.290000e-44 191.0
59 TraesCS7D01G375500 chr2A 100.000 28 0 0 6053 6080 516839831 516839804 1.100000e-02 52.8
60 TraesCS7D01G375500 chr3B 76.989 352 65 8 431 777 11578024 11578364 2.960000e-43 187.0
61 TraesCS7D01G375500 chr3B 80.000 130 15 8 6052 6175 787910069 787910193 1.110000e-12 86.1
62 TraesCS7D01G375500 chr3B 93.333 45 2 1 5798 5842 96063760 96063717 1.450000e-06 65.8
63 TraesCS7D01G375500 chr3B 100.000 28 0 0 5740 5767 738992086 738992113 1.100000e-02 52.8
64 TraesCS7D01G375500 chr3B 100.000 28 0 0 5853 5880 738992086 738992113 1.100000e-02 52.8
65 TraesCS7D01G375500 chr6B 79.452 146 16 12 6043 6182 683247551 683247414 2.390000e-14 91.6
66 TraesCS7D01G375500 chr1A 80.000 135 18 8 6042 6171 577989975 577989845 2.390000e-14 91.6
67 TraesCS7D01G375500 chr5A 79.070 129 15 9 6053 6173 32750624 32750748 1.860000e-10 78.7
68 TraesCS7D01G375500 chr5A 82.105 95 11 5 5953 6043 301364477 301364569 6.680000e-10 76.8
69 TraesCS7D01G375500 chr4D 97.368 38 1 0 5910 5947 384976864 384976827 1.450000e-06 65.8
70 TraesCS7D01G375500 chr4D 97.368 38 1 0 5797 5834 384976864 384976827 1.450000e-06 65.8
71 TraesCS7D01G375500 chr4D 96.970 33 1 0 5845 5877 378751012 378751044 8.700000e-04 56.5
72 TraesCS7D01G375500 chr4D 96.875 32 1 0 5733 5764 378751013 378751044 3.000000e-03 54.7
73 TraesCS7D01G375500 chr4B 97.368 38 1 0 5910 5947 395734944 395734907 1.450000e-06 65.8
74 TraesCS7D01G375500 chr4B 97.368 38 1 0 5797 5834 395734944 395734907 1.450000e-06 65.8
75 TraesCS7D01G375500 chr3D 97.436 39 0 1 5910 5947 369508103 369508065 1.450000e-06 65.8
76 TraesCS7D01G375500 chr3D 97.436 39 0 1 5797 5834 369508103 369508065 1.450000e-06 65.8
77 TraesCS7D01G375500 chr3D 94.737 38 0 2 5853 5889 94515599 94515563 2.420000e-04 58.4
78 TraesCS7D01G375500 chr3D 94.737 38 0 2 5740 5776 94515599 94515563 2.420000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G375500 chr7D 485824176 485830389 6213 False 3963.333333 11476 99.425333 1 6214 3 chr7D.!!$F3 6213
1 TraesCS7D01G375500 chr7D 44254192 44254766 574 False 222.000000 222 74.747000 191 756 1 chr7D.!!$F2 565
2 TraesCS7D01G375500 chr7A 554380046 554386263 6217 False 2029.000000 4157 94.425500 257 5665 4 chr7A.!!$F3 5408
3 TraesCS7D01G375500 chr7A 46678560 46679135 575 False 207.000000 207 74.155000 191 756 1 chr7A.!!$F2 565
4 TraesCS7D01G375500 chr7B 513645247 513650899 5652 False 2328.666667 3866 90.729667 1 5675 3 chr7B.!!$F3 5674
5 TraesCS7D01G375500 chr5D 498464504 498465128 624 False 547.000000 547 83.016000 147 756 1 chr5D.!!$F1 609
6 TraesCS7D01G375500 chr5D 295079765 295080375 610 True 422.000000 422 79.841000 152 759 1 chr5D.!!$R1 607
7 TraesCS7D01G375500 chr4A 578106098 578106723 625 False 494.000000 494 81.607000 134 756 1 chr4A.!!$F1 622
8 TraesCS7D01G375500 chr1D 272535890 272536467 577 True 473.000000 473 82.131000 201 758 1 chr1D.!!$R1 557
9 TraesCS7D01G375500 chr1D 444844590 444845179 589 True 440.000000 440 80.776000 188 758 1 chr1D.!!$R4 570
10 TraesCS7D01G375500 chr1D 409762251 409762801 550 True 438.000000 438 81.703000 216 744 1 chr1D.!!$R2 528
11 TraesCS7D01G375500 chr6A 608656005 608656588 583 True 442.000000 442 81.049000 191 756 1 chr6A.!!$R1 565
12 TraesCS7D01G375500 chr1B 433138153 433138694 541 True 440.000000 440 81.835000 230 757 1 chr1B.!!$R1 527
13 TraesCS7D01G375500 chr5B 679666167 679666782 615 False 433.000000 433 80.063000 134 742 1 chr5B.!!$F2 608
14 TraesCS7D01G375500 chr5B 319814918 319815520 602 True 226.000000 226 74.641000 147 742 1 chr5B.!!$R1 595
15 TraesCS7D01G375500 chr6D 407203330 407203964 634 False 431.000000 431 79.567000 134 756 1 chr6D.!!$F1 622
16 TraesCS7D01G375500 chr2D 131775066 131775641 575 False 424.000000 424 80.656000 188 742 1 chr2D.!!$F2 554

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
315 327 0.179020 CTTGGGTGAGCTTGTGTGGA 60.179 55.000 0.00 0.0 0.00 4.02 F
317 329 0.257328 TGGGTGAGCTTGTGTGGAAA 59.743 50.000 0.00 0.0 0.00 3.13 F
1071 1127 0.320771 AGTACCGCAACAAGCTCCTG 60.321 55.000 0.00 0.0 42.61 3.86 F
1916 1983 1.238625 TACGCGGAAAGGCCCAAAAG 61.239 55.000 12.47 0.0 0.00 2.27 F
2093 2168 3.820467 TCTTGTGGTTATGCTTGGTCTTG 59.180 43.478 0.00 0.0 0.00 3.02 F
3457 4351 4.261801 TGCTACTTTACTCATTCAAGGGC 58.738 43.478 0.00 0.0 0.00 5.19 F
4792 5729 0.933097 CGAATGAGCAATCCAGGACG 59.067 55.000 0.00 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1234 1292 0.037734 ACGGAAAACCAGATCCCACC 59.962 55.000 0.00 0.0 31.73 4.61 R
1235 1293 1.165270 CACGGAAAACCAGATCCCAC 58.835 55.000 0.00 0.0 31.73 4.61 R
2255 2331 2.119801 ACTGGCATCATCTCCAACAC 57.880 50.000 0.00 0.0 30.98 3.32 R
3457 4351 0.811616 GTGGGCCATAGAGCAGAACG 60.812 60.000 10.70 0.0 0.00 3.95 R
3879 4773 2.031157 ACAGCTAATTCGCGCAAAAACT 60.031 40.909 8.75 0.0 34.40 2.66 R
5144 6088 0.034198 TGGCGTCATTCAACTTCCGA 59.966 50.000 0.00 0.0 0.00 4.55 R
5982 6998 0.107703 CGCACATACACTGACCCCAT 60.108 55.000 0.00 0.0 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 88 3.613494 TGGTCCGTTATCGAATCCAAA 57.387 42.857 0.00 0.00 39.71 3.28
98 99 7.309012 CGTTATCGAATCCAAATAGAGTCCCTA 60.309 40.741 0.00 0.00 39.71 3.53
99 100 6.996180 ATCGAATCCAAATAGAGTCCCTAA 57.004 37.500 0.00 0.00 0.00 2.69
100 101 6.801718 TCGAATCCAAATAGAGTCCCTAAA 57.198 37.500 0.00 0.00 0.00 1.85
101 102 7.190335 TCGAATCCAAATAGAGTCCCTAAAA 57.810 36.000 0.00 0.00 0.00 1.52
102 103 7.626390 TCGAATCCAAATAGAGTCCCTAAAAA 58.374 34.615 0.00 0.00 0.00 1.94
176 178 5.757808 AGAAAAGCTCTTCTTCTTCTGTCAC 59.242 40.000 0.00 0.00 31.39 3.67
181 183 2.956333 TCTTCTTCTTCTGTCACCGTCA 59.044 45.455 0.00 0.00 0.00 4.35
182 184 2.795175 TCTTCTTCTGTCACCGTCAC 57.205 50.000 0.00 0.00 0.00 3.67
183 185 2.307768 TCTTCTTCTGTCACCGTCACT 58.692 47.619 0.00 0.00 0.00 3.41
209 211 2.687200 CGGTCCACCCCATCTCCA 60.687 66.667 0.00 0.00 0.00 3.86
210 212 2.735772 CGGTCCACCCCATCTCCAG 61.736 68.421 0.00 0.00 0.00 3.86
301 312 5.419542 TCTTGTTAGATTCATCGTCTTGGG 58.580 41.667 0.00 0.00 0.00 4.12
315 327 0.179020 CTTGGGTGAGCTTGTGTGGA 60.179 55.000 0.00 0.00 0.00 4.02
317 329 0.257328 TGGGTGAGCTTGTGTGGAAA 59.743 50.000 0.00 0.00 0.00 3.13
420 451 1.134491 GGATCTCACGGGATTCGGTTT 60.134 52.381 0.00 0.00 44.45 3.27
465 516 1.553248 TGGATCCGATCTTGGTTCGTT 59.447 47.619 7.39 0.00 34.85 3.85
471 522 2.222445 CCGATCTTGGTTCGTTTTCGTT 59.778 45.455 0.00 0.00 44.46 3.85
488 539 4.619437 TCGTTTGGGTGTTTACAAGTTC 57.381 40.909 0.00 0.00 0.00 3.01
569 620 4.832608 GGGGCCTTAGCACGACGG 62.833 72.222 0.84 0.00 46.55 4.79
589 640 2.367486 GCTTCCCGACTGTCTACTACT 58.633 52.381 6.21 0.00 0.00 2.57
608 659 2.963782 ACTACAAGGTTTGTCCGACTCT 59.036 45.455 0.00 0.00 44.12 3.24
619 670 0.404426 TCCGACTCTGGTGAGGAAGA 59.596 55.000 0.00 0.00 44.29 2.87
674 726 5.100259 TCAGTGTTTGTACTTATCGCTAGC 58.900 41.667 4.06 4.06 0.00 3.42
744 800 8.563123 ACTGCCATGATTGAAGATGAATATAG 57.437 34.615 0.00 0.00 0.00 1.31
745 801 7.120873 ACTGCCATGATTGAAGATGAATATAGC 59.879 37.037 0.00 0.00 0.00 2.97
766 822 6.018589 AGCTTGAAAGTTTTTCTATCCTGC 57.981 37.500 3.53 0.00 0.00 4.85
769 825 6.701400 GCTTGAAAGTTTTTCTATCCTGCAAA 59.299 34.615 3.53 0.00 0.00 3.68
851 907 0.458889 TCGTATTTTGCCCGTCCGAG 60.459 55.000 0.00 0.00 0.00 4.63
936 992 4.838486 GCGGACGGAGAGCGTCAG 62.838 72.222 0.00 0.00 38.04 3.51
1071 1127 0.320771 AGTACCGCAACAAGCTCCTG 60.321 55.000 0.00 0.00 42.61 3.86
1117 1173 2.356553 GCACAGGTAACACGGCGA 60.357 61.111 16.62 0.00 41.41 5.54
1121 1179 2.602568 AGGTAACACGGCGACCCT 60.603 61.111 16.62 7.84 41.41 4.34
1135 1193 4.179599 CCCTCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
1231 1289 2.040544 GGTGCTGGTCGATTGTGGG 61.041 63.158 0.00 0.00 0.00 4.61
1300 1359 2.556257 GTTTTGGTTTGGCCGATTTGT 58.444 42.857 0.00 0.00 41.21 2.83
1324 1383 2.358003 GAGTTGCGTGCCTCAGCT 60.358 61.111 0.00 0.00 40.80 4.24
1327 1386 2.203195 TTGCGTGCCTCAGCTTGT 60.203 55.556 0.00 0.00 40.80 3.16
1447 1512 8.360390 GTCTTTGATTTAGGTGAGATTTGGTTT 58.640 33.333 0.00 0.00 0.00 3.27
1506 1571 5.786401 AGTGTTATTCTCGTTGAGCATTC 57.214 39.130 0.00 0.00 0.00 2.67
1508 1573 5.700832 AGTGTTATTCTCGTTGAGCATTCAA 59.299 36.000 0.00 0.00 40.92 2.69
1555 1620 4.441634 CGGTCAGTTCCTAGATAGGTTTGG 60.442 50.000 5.82 0.00 44.02 3.28
1558 1623 4.715297 TCAGTTCCTAGATAGGTTTGGTCC 59.285 45.833 5.82 0.00 44.02 4.46
1652 1718 6.840780 ACATTTAGCTAGTCATTTGGCTTT 57.159 33.333 0.00 0.00 36.40 3.51
1675 1741 7.674471 TTATTTGTGGTCGTGATGTAATTGA 57.326 32.000 0.00 0.00 0.00 2.57
1676 1742 6.757897 ATTTGTGGTCGTGATGTAATTGAT 57.242 33.333 0.00 0.00 0.00 2.57
1677 1743 6.567687 TTTGTGGTCGTGATGTAATTGATT 57.432 33.333 0.00 0.00 0.00 2.57
1700 1766 8.995027 ATTATTATCTGGTTTGGCAGTTCATA 57.005 30.769 0.00 0.00 0.00 2.15
1817 1883 6.384305 AGGTCCTATAACTCTGTGCTGTTAAT 59.616 38.462 0.00 0.00 33.21 1.40
1912 1979 1.978455 ATCATACGCGGAAAGGCCCA 61.978 55.000 12.47 0.00 0.00 5.36
1916 1983 1.238625 TACGCGGAAAGGCCCAAAAG 61.239 55.000 12.47 0.00 0.00 2.27
1959 2026 6.463995 TGTGCCTGTTCATTTTTCTACTTT 57.536 33.333 0.00 0.00 0.00 2.66
1960 2027 7.575414 TGTGCCTGTTCATTTTTCTACTTTA 57.425 32.000 0.00 0.00 0.00 1.85
2093 2168 3.820467 TCTTGTGGTTATGCTTGGTCTTG 59.180 43.478 0.00 0.00 0.00 3.02
2255 2331 7.943413 TGTGAAAATGATGGTTAAACACATG 57.057 32.000 0.00 0.00 32.23 3.21
2439 2913 6.590234 ATTATGTACTCGATCTGGCACATA 57.410 37.500 0.00 0.00 38.20 2.29
2504 2978 9.376075 TCAATGTTTGATGCAACTTCTTTTTAA 57.624 25.926 0.00 0.00 34.08 1.52
2798 3272 6.872585 ATCCATTCTCTTTTTGGCCATTAA 57.127 33.333 6.09 0.50 0.00 1.40
3110 3977 7.444558 TTTTTCGTTTATGTTTCAGTTCAGC 57.555 32.000 0.00 0.00 0.00 4.26
3147 4041 6.442541 TCTGTTTCTAATGTGAGGGGTTAA 57.557 37.500 0.00 0.00 0.00 2.01
3318 4212 6.824305 ATGAATCCAGAATTGTTTCTTCGT 57.176 33.333 0.00 0.00 40.28 3.85
3365 4259 5.585390 AGTTTGAAGAAAAGATGTGCTGTG 58.415 37.500 0.00 0.00 0.00 3.66
3371 4265 7.362662 TGAAGAAAAGATGTGCTGTGAAATAC 58.637 34.615 0.00 0.00 0.00 1.89
3457 4351 4.261801 TGCTACTTTACTCATTCAAGGGC 58.738 43.478 0.00 0.00 0.00 5.19
3686 4580 7.459795 TGACAAATATATTGGTGAAAGTGCA 57.540 32.000 10.33 0.00 0.00 4.57
3844 4738 6.537301 TGTAAGCTATTACATTTGTTCCCTCG 59.463 38.462 0.00 0.00 44.94 4.63
3867 4761 4.768968 GTGGCCAAATATATTCTGCTCCAT 59.231 41.667 7.24 0.00 0.00 3.41
3889 4783 8.064814 TCCATTTGTTATTTTAAGTTTTTGCGC 58.935 29.630 0.00 0.00 0.00 6.09
3912 4814 5.578727 GCGAATTAGCTGTAGATCATTAGGG 59.421 44.000 2.97 0.00 0.00 3.53
4266 5185 4.142038 AGCTCGGAAAGGTACACATTTTT 58.858 39.130 0.00 0.00 32.74 1.94
4463 5388 5.220854 CCGCCTTTCCTACATCATAAAGTTG 60.221 44.000 0.00 0.00 0.00 3.16
4464 5389 5.354234 CGCCTTTCCTACATCATAAAGTTGT 59.646 40.000 0.00 0.00 34.63 3.32
4465 5390 6.128007 CGCCTTTCCTACATCATAAAGTTGTT 60.128 38.462 0.00 0.00 32.60 2.83
4466 5391 7.029563 GCCTTTCCTACATCATAAAGTTGTTG 58.970 38.462 0.00 0.00 32.60 3.33
4509 5434 3.264450 AGGTCAGTGTTAATCTTGGGGAG 59.736 47.826 0.00 0.00 0.00 4.30
4511 5436 2.576191 TCAGTGTTAATCTTGGGGAGGG 59.424 50.000 0.00 0.00 0.00 4.30
4512 5437 2.576191 CAGTGTTAATCTTGGGGAGGGA 59.424 50.000 0.00 0.00 0.00 4.20
4514 5439 3.858638 AGTGTTAATCTTGGGGAGGGAAT 59.141 43.478 0.00 0.00 0.00 3.01
4515 5440 4.294970 AGTGTTAATCTTGGGGAGGGAATT 59.705 41.667 0.00 0.00 0.00 2.17
4516 5441 4.402474 GTGTTAATCTTGGGGAGGGAATTG 59.598 45.833 0.00 0.00 0.00 2.32
4647 5574 5.361135 TGTGTTGTGAGTTGCTGAATATG 57.639 39.130 0.00 0.00 0.00 1.78
4792 5729 0.933097 CGAATGAGCAATCCAGGACG 59.067 55.000 0.00 0.00 0.00 4.79
4846 5783 3.798337 CCAAGCATGGCGAAATTGATTAC 59.202 43.478 0.00 0.00 40.58 1.89
4884 5821 1.135053 GGCCGAGGTGAGTTACTCTTC 60.135 57.143 13.86 7.75 0.00 2.87
4889 5826 4.083110 CCGAGGTGAGTTACTCTTCGTTAA 60.083 45.833 22.12 0.00 32.41 2.01
4934 5871 3.507622 GCTGGTGTTTCTGAAGCCTTAAT 59.492 43.478 1.71 0.00 0.00 1.40
4935 5872 4.700213 GCTGGTGTTTCTGAAGCCTTAATA 59.300 41.667 1.71 0.00 0.00 0.98
4936 5873 5.183140 GCTGGTGTTTCTGAAGCCTTAATAA 59.817 40.000 1.71 0.00 0.00 1.40
4937 5874 6.569179 TGGTGTTTCTGAAGCCTTAATAAC 57.431 37.500 1.71 0.00 0.00 1.89
4939 5876 6.430000 TGGTGTTTCTGAAGCCTTAATAACTC 59.570 38.462 1.71 0.00 0.00 3.01
4940 5877 6.655425 GGTGTTTCTGAAGCCTTAATAACTCT 59.345 38.462 1.71 0.00 0.00 3.24
5062 5999 1.073763 CTTCATGAAGGTGGGGTGTCA 59.926 52.381 25.14 0.00 34.87 3.58
5096 6039 8.696374 TCTTTCTACCTGTTCATCCTAATACAG 58.304 37.037 0.00 0.00 38.14 2.74
5106 6049 3.795623 TCCTAATACAGTTGAGTCGGC 57.204 47.619 0.00 0.00 0.00 5.54
5141 6085 1.071128 GGCAAAATGGTTGCAGGCA 59.929 52.632 12.66 0.00 46.58 4.75
5144 6088 1.811176 GCAAAATGGTTGCAGGCAGTT 60.811 47.619 6.19 0.00 44.34 3.16
5231 6175 6.847567 AGGACTAAGATGAGAGTAGGAGACTA 59.152 42.308 0.00 0.00 43.67 2.59
5280 6229 0.888736 CCATGGCGGAGTTTGTCACA 60.889 55.000 0.00 0.00 36.56 3.58
5366 6317 1.813896 CCGCGCAAGTTGATGTAATG 58.186 50.000 8.75 0.00 41.68 1.90
5440 6393 3.857157 TCCTTCAAGTTACTGTGCCTT 57.143 42.857 0.00 0.00 0.00 4.35
5493 6493 2.189342 GCGATTTCTTCCTGTCTCTCG 58.811 52.381 0.00 0.00 0.00 4.04
5504 6504 4.505808 TCCTGTCTCTCGTGTTACTCTAG 58.494 47.826 0.00 0.00 0.00 2.43
5508 6508 3.064271 GTCTCTCGTGTTACTCTAGCTGG 59.936 52.174 0.00 0.00 0.00 4.85
5513 6513 4.529897 TCGTGTTACTCTAGCTGGGAATA 58.470 43.478 0.00 0.00 0.00 1.75
5516 6516 6.097839 TCGTGTTACTCTAGCTGGGAATAAAT 59.902 38.462 0.00 0.00 0.00 1.40
5525 6525 3.067180 AGCTGGGAATAAATGAATGTGCG 59.933 43.478 0.00 0.00 0.00 5.34
5526 6526 3.796504 GCTGGGAATAAATGAATGTGCGG 60.797 47.826 0.00 0.00 0.00 5.69
5534 6534 3.575965 AATGAATGTGCGGAAAGGAAC 57.424 42.857 0.00 0.00 0.00 3.62
5535 6535 0.871722 TGAATGTGCGGAAAGGAACG 59.128 50.000 0.00 0.00 0.00 3.95
5592 6608 4.887071 TCAAGAAATGTGCAGTGGTACTTT 59.113 37.500 0.00 0.00 0.00 2.66
5596 6612 2.920724 TGTGCAGTGGTACTTTGCTA 57.079 45.000 14.56 5.05 38.70 3.49
5597 6613 3.417069 TGTGCAGTGGTACTTTGCTAT 57.583 42.857 14.56 0.00 38.70 2.97
5598 6614 4.545208 TGTGCAGTGGTACTTTGCTATA 57.455 40.909 14.56 3.02 38.70 1.31
5600 6616 5.496556 TGTGCAGTGGTACTTTGCTATATT 58.503 37.500 14.56 0.00 38.70 1.28
5650 6666 2.094258 CGACCTGATTCACGTGGAATTG 59.906 50.000 17.00 10.42 46.17 2.32
5657 6673 0.880441 TCACGTGGAATTGCACATGG 59.120 50.000 26.79 16.15 0.00 3.66
5713 6729 2.967745 TCCAATGTGGATGTGAACCA 57.032 45.000 0.00 0.00 42.67 3.67
5714 6730 3.235750 TCCAATGTGGATGTGAACCAA 57.764 42.857 0.00 0.00 42.67 3.67
5715 6731 2.890311 TCCAATGTGGATGTGAACCAAC 59.110 45.455 0.00 0.00 42.67 3.77
5716 6732 2.892852 CCAATGTGGATGTGAACCAACT 59.107 45.455 0.00 0.00 40.96 3.16
5717 6733 3.321682 CCAATGTGGATGTGAACCAACTT 59.678 43.478 0.00 0.00 40.96 2.66
5718 6734 4.300803 CAATGTGGATGTGAACCAACTTG 58.699 43.478 0.00 0.00 39.22 3.16
5719 6735 3.011566 TGTGGATGTGAACCAACTTGT 57.988 42.857 0.00 0.00 39.22 3.16
5720 6736 2.687425 TGTGGATGTGAACCAACTTGTG 59.313 45.455 0.00 0.00 39.22 3.33
5748 6764 4.479786 TTTTGAGGGGAAAACCAACTTG 57.520 40.909 0.00 0.00 42.91 3.16
5749 6765 2.838637 TGAGGGGAAAACCAACTTGT 57.161 45.000 0.00 0.00 42.91 3.16
5750 6766 2.383855 TGAGGGGAAAACCAACTTGTG 58.616 47.619 0.00 0.00 42.91 3.33
5764 6780 4.447138 AACTTGTGGTTGGATGGTTAGA 57.553 40.909 0.00 0.00 36.70 2.10
5765 6781 4.447138 ACTTGTGGTTGGATGGTTAGAA 57.553 40.909 0.00 0.00 0.00 2.10
5766 6782 4.398319 ACTTGTGGTTGGATGGTTAGAAG 58.602 43.478 0.00 0.00 0.00 2.85
5767 6783 4.104102 ACTTGTGGTTGGATGGTTAGAAGA 59.896 41.667 0.00 0.00 0.00 2.87
5768 6784 4.715534 TGTGGTTGGATGGTTAGAAGAA 57.284 40.909 0.00 0.00 0.00 2.52
5769 6785 5.055265 TGTGGTTGGATGGTTAGAAGAAA 57.945 39.130 0.00 0.00 0.00 2.52
5770 6786 5.070001 TGTGGTTGGATGGTTAGAAGAAAG 58.930 41.667 0.00 0.00 0.00 2.62
5771 6787 5.070685 GTGGTTGGATGGTTAGAAGAAAGT 58.929 41.667 0.00 0.00 0.00 2.66
5772 6788 5.535030 GTGGTTGGATGGTTAGAAGAAAGTT 59.465 40.000 0.00 0.00 0.00 2.66
5773 6789 5.534654 TGGTTGGATGGTTAGAAGAAAGTTG 59.465 40.000 0.00 0.00 0.00 3.16
5774 6790 5.048013 GGTTGGATGGTTAGAAGAAAGTTGG 60.048 44.000 0.00 0.00 0.00 3.77
5775 6791 5.319043 TGGATGGTTAGAAGAAAGTTGGT 57.681 39.130 0.00 0.00 0.00 3.67
5776 6792 5.701224 TGGATGGTTAGAAGAAAGTTGGTT 58.299 37.500 0.00 0.00 0.00 3.67
5777 6793 5.534654 TGGATGGTTAGAAGAAAGTTGGTTG 59.465 40.000 0.00 0.00 0.00 3.77
5778 6794 5.048013 GGATGGTTAGAAGAAAGTTGGTTGG 60.048 44.000 0.00 0.00 0.00 3.77
5779 6795 5.118729 TGGTTAGAAGAAAGTTGGTTGGA 57.881 39.130 0.00 0.00 0.00 3.53
5780 6796 5.701224 TGGTTAGAAGAAAGTTGGTTGGAT 58.299 37.500 0.00 0.00 0.00 3.41
5781 6797 5.534654 TGGTTAGAAGAAAGTTGGTTGGATG 59.465 40.000 0.00 0.00 0.00 3.51
5782 6798 5.048013 GGTTAGAAGAAAGTTGGTTGGATGG 60.048 44.000 0.00 0.00 0.00 3.51
5783 6799 4.184649 AGAAGAAAGTTGGTTGGATGGT 57.815 40.909 0.00 0.00 0.00 3.55
5784 6800 3.891366 AGAAGAAAGTTGGTTGGATGGTG 59.109 43.478 0.00 0.00 0.00 4.17
5785 6801 2.597455 AGAAAGTTGGTTGGATGGTGG 58.403 47.619 0.00 0.00 0.00 4.61
5786 6802 2.091333 AGAAAGTTGGTTGGATGGTGGT 60.091 45.455 0.00 0.00 0.00 4.16
5787 6803 3.139397 AGAAAGTTGGTTGGATGGTGGTA 59.861 43.478 0.00 0.00 0.00 3.25
5788 6804 3.825908 AAGTTGGTTGGATGGTGGTAT 57.174 42.857 0.00 0.00 0.00 2.73
5789 6805 3.825908 AGTTGGTTGGATGGTGGTATT 57.174 42.857 0.00 0.00 0.00 1.89
5790 6806 3.697166 AGTTGGTTGGATGGTGGTATTC 58.303 45.455 0.00 0.00 0.00 1.75
5791 6807 3.333680 AGTTGGTTGGATGGTGGTATTCT 59.666 43.478 0.00 0.00 0.00 2.40
5792 6808 3.644966 TGGTTGGATGGTGGTATTCTC 57.355 47.619 0.00 0.00 0.00 2.87
5793 6809 2.916269 TGGTTGGATGGTGGTATTCTCA 59.084 45.455 0.00 0.00 0.00 3.27
5794 6810 3.332187 TGGTTGGATGGTGGTATTCTCAA 59.668 43.478 0.00 0.00 0.00 3.02
5795 6811 3.694566 GGTTGGATGGTGGTATTCTCAAC 59.305 47.826 0.00 0.00 34.35 3.18
5796 6812 3.644966 TGGATGGTGGTATTCTCAACC 57.355 47.619 0.00 0.00 37.53 3.77
5797 6813 2.093181 TGGATGGTGGTATTCTCAACCG 60.093 50.000 0.00 0.00 40.08 4.44
5798 6814 1.940613 GATGGTGGTATTCTCAACCGC 59.059 52.381 0.00 0.00 45.03 5.68
5804 6820 5.751243 GTGGTATTCTCAACCGCATTTAT 57.249 39.130 1.08 0.00 45.09 1.40
5805 6821 6.131544 GTGGTATTCTCAACCGCATTTATT 57.868 37.500 1.08 0.00 45.09 1.40
5806 6822 6.199393 GTGGTATTCTCAACCGCATTTATTC 58.801 40.000 1.08 0.00 45.09 1.75
5807 6823 6.038271 GTGGTATTCTCAACCGCATTTATTCT 59.962 38.462 1.08 0.00 45.09 2.40
5808 6824 6.038161 TGGTATTCTCAACCGCATTTATTCTG 59.962 38.462 0.00 0.00 40.08 3.02
5809 6825 4.963276 TTCTCAACCGCATTTATTCTGG 57.037 40.909 0.00 0.00 0.00 3.86
5810 6826 4.214986 TCTCAACCGCATTTATTCTGGA 57.785 40.909 0.00 0.00 0.00 3.86
5811 6827 4.780815 TCTCAACCGCATTTATTCTGGAT 58.219 39.130 0.00 0.00 0.00 3.41
5812 6828 5.192927 TCTCAACCGCATTTATTCTGGATT 58.807 37.500 0.00 0.00 0.00 3.01
5813 6829 5.652014 TCTCAACCGCATTTATTCTGGATTT 59.348 36.000 0.00 0.00 0.00 2.17
5814 6830 6.826231 TCTCAACCGCATTTATTCTGGATTTA 59.174 34.615 0.00 0.00 0.00 1.40
5815 6831 7.502226 TCTCAACCGCATTTATTCTGGATTTAT 59.498 33.333 0.00 0.00 0.00 1.40
5816 6832 8.006298 TCAACCGCATTTATTCTGGATTTATT 57.994 30.769 0.00 0.00 0.00 1.40
5817 6833 8.474025 TCAACCGCATTTATTCTGGATTTATTT 58.526 29.630 0.00 0.00 0.00 1.40
5818 6834 8.755018 CAACCGCATTTATTCTGGATTTATTTC 58.245 33.333 0.00 0.00 0.00 2.17
5819 6835 8.006298 ACCGCATTTATTCTGGATTTATTTCA 57.994 30.769 0.00 0.00 0.00 2.69
5820 6836 8.137437 ACCGCATTTATTCTGGATTTATTTCAG 58.863 33.333 0.00 0.00 0.00 3.02
5821 6837 7.596248 CCGCATTTATTCTGGATTTATTTCAGG 59.404 37.037 0.00 0.00 0.00 3.86
5822 6838 8.352201 CGCATTTATTCTGGATTTATTTCAGGA 58.648 33.333 0.00 0.00 0.00 3.86
5829 6845 7.333528 TCTGGATTTATTTCAGGATTTTCGG 57.666 36.000 0.00 0.00 0.00 4.30
5830 6846 5.901552 TGGATTTATTTCAGGATTTTCGGC 58.098 37.500 0.00 0.00 0.00 5.54
5831 6847 5.420421 TGGATTTATTTCAGGATTTTCGGCA 59.580 36.000 0.00 0.00 0.00 5.69
5832 6848 6.071108 TGGATTTATTTCAGGATTTTCGGCAA 60.071 34.615 0.00 0.00 0.00 4.52
5833 6849 6.986231 GGATTTATTTCAGGATTTTCGGCAAT 59.014 34.615 0.00 0.00 0.00 3.56
5834 6850 8.141268 GGATTTATTTCAGGATTTTCGGCAATA 58.859 33.333 0.00 0.00 0.00 1.90
5835 6851 9.696917 GATTTATTTCAGGATTTTCGGCAATAT 57.303 29.630 0.00 0.00 0.00 1.28
5836 6852 9.696917 ATTTATTTCAGGATTTTCGGCAATATC 57.303 29.630 0.00 0.00 0.00 1.63
5837 6853 4.811555 TTCAGGATTTTCGGCAATATCG 57.188 40.909 0.00 0.00 0.00 2.92
5838 6854 3.804036 TCAGGATTTTCGGCAATATCGT 58.196 40.909 0.00 0.00 0.00 3.73
5839 6855 4.196193 TCAGGATTTTCGGCAATATCGTT 58.804 39.130 0.00 0.00 0.00 3.85
5840 6856 4.638421 TCAGGATTTTCGGCAATATCGTTT 59.362 37.500 0.00 0.00 0.00 3.60
5841 6857 5.124776 TCAGGATTTTCGGCAATATCGTTTT 59.875 36.000 0.00 0.00 0.00 2.43
5842 6858 5.804979 CAGGATTTTCGGCAATATCGTTTTT 59.195 36.000 0.00 0.00 0.00 1.94
5863 6879 5.346181 TTTTAGGGGAAAACCAACTTGTG 57.654 39.130 0.00 0.00 42.91 3.33
5877 6893 4.447138 AACTTGTGGTTGGATGGTTAGA 57.553 40.909 0.00 0.00 36.70 2.10
5878 6894 4.447138 ACTTGTGGTTGGATGGTTAGAA 57.553 40.909 0.00 0.00 0.00 2.10
5879 6895 4.398319 ACTTGTGGTTGGATGGTTAGAAG 58.602 43.478 0.00 0.00 0.00 2.85
5880 6896 4.104102 ACTTGTGGTTGGATGGTTAGAAGA 59.896 41.667 0.00 0.00 0.00 2.87
5881 6897 4.715534 TGTGGTTGGATGGTTAGAAGAA 57.284 40.909 0.00 0.00 0.00 2.52
5882 6898 5.055265 TGTGGTTGGATGGTTAGAAGAAA 57.945 39.130 0.00 0.00 0.00 2.52
5883 6899 5.070001 TGTGGTTGGATGGTTAGAAGAAAG 58.930 41.667 0.00 0.00 0.00 2.62
5884 6900 5.070685 GTGGTTGGATGGTTAGAAGAAAGT 58.929 41.667 0.00 0.00 0.00 2.66
5885 6901 5.535030 GTGGTTGGATGGTTAGAAGAAAGTT 59.465 40.000 0.00 0.00 0.00 2.66
5886 6902 5.534654 TGGTTGGATGGTTAGAAGAAAGTTG 59.465 40.000 0.00 0.00 0.00 3.16
5887 6903 5.048013 GGTTGGATGGTTAGAAGAAAGTTGG 60.048 44.000 0.00 0.00 0.00 3.77
5888 6904 5.319043 TGGATGGTTAGAAGAAAGTTGGT 57.681 39.130 0.00 0.00 0.00 3.67
5889 6905 5.701224 TGGATGGTTAGAAGAAAGTTGGTT 58.299 37.500 0.00 0.00 0.00 3.67
5890 6906 5.534654 TGGATGGTTAGAAGAAAGTTGGTTG 59.465 40.000 0.00 0.00 0.00 3.77
5891 6907 5.048013 GGATGGTTAGAAGAAAGTTGGTTGG 60.048 44.000 0.00 0.00 0.00 3.77
5892 6908 5.118729 TGGTTAGAAGAAAGTTGGTTGGA 57.881 39.130 0.00 0.00 0.00 3.53
5893 6909 5.701224 TGGTTAGAAGAAAGTTGGTTGGAT 58.299 37.500 0.00 0.00 0.00 3.41
5894 6910 5.534654 TGGTTAGAAGAAAGTTGGTTGGATG 59.465 40.000 0.00 0.00 0.00 3.51
5895 6911 5.048013 GGTTAGAAGAAAGTTGGTTGGATGG 60.048 44.000 0.00 0.00 0.00 3.51
5896 6912 4.184649 AGAAGAAAGTTGGTTGGATGGT 57.815 40.909 0.00 0.00 0.00 3.55
5897 6913 3.891366 AGAAGAAAGTTGGTTGGATGGTG 59.109 43.478 0.00 0.00 0.00 4.17
5898 6914 2.597455 AGAAAGTTGGTTGGATGGTGG 58.403 47.619 0.00 0.00 0.00 4.61
5899 6915 2.091333 AGAAAGTTGGTTGGATGGTGGT 60.091 45.455 0.00 0.00 0.00 4.16
5900 6916 3.139397 AGAAAGTTGGTTGGATGGTGGTA 59.861 43.478 0.00 0.00 0.00 3.25
5901 6917 3.825908 AAGTTGGTTGGATGGTGGTAT 57.174 42.857 0.00 0.00 0.00 2.73
5902 6918 3.825908 AGTTGGTTGGATGGTGGTATT 57.174 42.857 0.00 0.00 0.00 1.89
5903 6919 3.697166 AGTTGGTTGGATGGTGGTATTC 58.303 45.455 0.00 0.00 0.00 1.75
5904 6920 3.333680 AGTTGGTTGGATGGTGGTATTCT 59.666 43.478 0.00 0.00 0.00 2.40
5905 6921 3.644966 TGGTTGGATGGTGGTATTCTC 57.355 47.619 0.00 0.00 0.00 2.87
5906 6922 2.916269 TGGTTGGATGGTGGTATTCTCA 59.084 45.455 0.00 0.00 0.00 3.27
5907 6923 3.332187 TGGTTGGATGGTGGTATTCTCAA 59.668 43.478 0.00 0.00 0.00 3.02
5908 6924 3.694566 GGTTGGATGGTGGTATTCTCAAC 59.305 47.826 0.00 0.00 34.35 3.18
5909 6925 3.644966 TGGATGGTGGTATTCTCAACC 57.355 47.619 0.00 0.00 37.53 3.77
5910 6926 2.093181 TGGATGGTGGTATTCTCAACCG 60.093 50.000 0.00 0.00 40.08 4.44
5911 6927 1.940613 GATGGTGGTATTCTCAACCGC 59.059 52.381 0.00 0.00 45.03 5.68
5917 6933 5.751243 GTGGTATTCTCAACCGCATTTAT 57.249 39.130 1.08 0.00 45.09 1.40
5918 6934 6.131544 GTGGTATTCTCAACCGCATTTATT 57.868 37.500 1.08 0.00 45.09 1.40
5919 6935 6.199393 GTGGTATTCTCAACCGCATTTATTC 58.801 40.000 1.08 0.00 45.09 1.75
5920 6936 6.038271 GTGGTATTCTCAACCGCATTTATTCT 59.962 38.462 1.08 0.00 45.09 2.40
5921 6937 6.038161 TGGTATTCTCAACCGCATTTATTCTG 59.962 38.462 0.00 0.00 40.08 3.02
5922 6938 4.963276 TTCTCAACCGCATTTATTCTGG 57.037 40.909 0.00 0.00 0.00 3.86
5923 6939 4.214986 TCTCAACCGCATTTATTCTGGA 57.785 40.909 0.00 0.00 0.00 3.86
5924 6940 4.780815 TCTCAACCGCATTTATTCTGGAT 58.219 39.130 0.00 0.00 0.00 3.41
5925 6941 5.192927 TCTCAACCGCATTTATTCTGGATT 58.807 37.500 0.00 0.00 0.00 3.01
5926 6942 5.652014 TCTCAACCGCATTTATTCTGGATTT 59.348 36.000 0.00 0.00 0.00 2.17
5927 6943 6.826231 TCTCAACCGCATTTATTCTGGATTTA 59.174 34.615 0.00 0.00 0.00 1.40
5928 6944 7.502226 TCTCAACCGCATTTATTCTGGATTTAT 59.498 33.333 0.00 0.00 0.00 1.40
5929 6945 8.006298 TCAACCGCATTTATTCTGGATTTATT 57.994 30.769 0.00 0.00 0.00 1.40
5930 6946 8.474025 TCAACCGCATTTATTCTGGATTTATTT 58.526 29.630 0.00 0.00 0.00 1.40
5931 6947 8.755018 CAACCGCATTTATTCTGGATTTATTTC 58.245 33.333 0.00 0.00 0.00 2.17
5932 6948 8.006298 ACCGCATTTATTCTGGATTTATTTCA 57.994 30.769 0.00 0.00 0.00 2.69
5933 6949 8.137437 ACCGCATTTATTCTGGATTTATTTCAG 58.863 33.333 0.00 0.00 0.00 3.02
5934 6950 7.596248 CCGCATTTATTCTGGATTTATTTCAGG 59.404 37.037 0.00 0.00 0.00 3.86
5935 6951 8.352201 CGCATTTATTCTGGATTTATTTCAGGA 58.648 33.333 0.00 0.00 0.00 3.86
5942 6958 7.333528 TCTGGATTTATTTCAGGATTTTCGG 57.666 36.000 0.00 0.00 0.00 4.30
5943 6959 5.901552 TGGATTTATTTCAGGATTTTCGGC 58.098 37.500 0.00 0.00 0.00 5.54
5944 6960 5.420421 TGGATTTATTTCAGGATTTTCGGCA 59.580 36.000 0.00 0.00 0.00 5.69
5945 6961 6.071108 TGGATTTATTTCAGGATTTTCGGCAA 60.071 34.615 0.00 0.00 0.00 4.52
5946 6962 6.986231 GGATTTATTTCAGGATTTTCGGCAAT 59.014 34.615 0.00 0.00 0.00 3.56
5947 6963 8.141268 GGATTTATTTCAGGATTTTCGGCAATA 58.859 33.333 0.00 0.00 0.00 1.90
5948 6964 9.696917 GATTTATTTCAGGATTTTCGGCAATAT 57.303 29.630 0.00 0.00 0.00 1.28
5949 6965 9.696917 ATTTATTTCAGGATTTTCGGCAATATC 57.303 29.630 0.00 0.00 0.00 1.63
5950 6966 4.811555 TTCAGGATTTTCGGCAATATCG 57.188 40.909 0.00 0.00 0.00 2.92
5951 6967 3.804036 TCAGGATTTTCGGCAATATCGT 58.196 40.909 0.00 0.00 0.00 3.73
5952 6968 4.196193 TCAGGATTTTCGGCAATATCGTT 58.804 39.130 0.00 0.00 0.00 3.85
5953 6969 4.272504 TCAGGATTTTCGGCAATATCGTTC 59.727 41.667 0.00 0.00 0.00 3.95
5954 6970 4.273480 CAGGATTTTCGGCAATATCGTTCT 59.727 41.667 0.00 0.00 0.00 3.01
5955 6971 4.881850 AGGATTTTCGGCAATATCGTTCTT 59.118 37.500 0.00 0.00 0.00 2.52
5956 6972 6.018262 CAGGATTTTCGGCAATATCGTTCTTA 60.018 38.462 0.00 0.00 0.00 2.10
5957 6973 6.202954 AGGATTTTCGGCAATATCGTTCTTAG 59.797 38.462 0.00 0.00 0.00 2.18
5958 6974 5.728351 TTTTCGGCAATATCGTTCTTAGG 57.272 39.130 0.00 0.00 0.00 2.69
5959 6975 3.380479 TCGGCAATATCGTTCTTAGGG 57.620 47.619 0.00 0.00 0.00 3.53
5960 6976 2.036733 TCGGCAATATCGTTCTTAGGGG 59.963 50.000 0.00 0.00 0.00 4.79
5961 6977 2.224209 CGGCAATATCGTTCTTAGGGGT 60.224 50.000 0.00 0.00 0.00 4.95
5962 6978 3.006110 CGGCAATATCGTTCTTAGGGGTA 59.994 47.826 0.00 0.00 0.00 3.69
5963 6979 4.566987 GGCAATATCGTTCTTAGGGGTAG 58.433 47.826 0.00 0.00 0.00 3.18
5964 6980 4.562963 GGCAATATCGTTCTTAGGGGTAGG 60.563 50.000 0.00 0.00 0.00 3.18
5965 6981 4.562963 GCAATATCGTTCTTAGGGGTAGGG 60.563 50.000 0.00 0.00 0.00 3.53
5966 6982 2.862850 ATCGTTCTTAGGGGTAGGGT 57.137 50.000 0.00 0.00 0.00 4.34
5967 6983 1.856629 TCGTTCTTAGGGGTAGGGTG 58.143 55.000 0.00 0.00 0.00 4.61
5968 6984 1.077663 TCGTTCTTAGGGGTAGGGTGT 59.922 52.381 0.00 0.00 0.00 4.16
5969 6985 1.206371 CGTTCTTAGGGGTAGGGTGTG 59.794 57.143 0.00 0.00 0.00 3.82
5970 6986 2.263545 GTTCTTAGGGGTAGGGTGTGT 58.736 52.381 0.00 0.00 0.00 3.72
5971 6987 1.946984 TCTTAGGGGTAGGGTGTGTG 58.053 55.000 0.00 0.00 0.00 3.82
5972 6988 1.150560 TCTTAGGGGTAGGGTGTGTGT 59.849 52.381 0.00 0.00 0.00 3.72
5973 6989 1.278127 CTTAGGGGTAGGGTGTGTGTG 59.722 57.143 0.00 0.00 0.00 3.82
5974 6990 1.196104 TAGGGGTAGGGTGTGTGTGC 61.196 60.000 0.00 0.00 0.00 4.57
5975 6991 2.358247 GGGTAGGGTGTGTGTGCG 60.358 66.667 0.00 0.00 0.00 5.34
5976 6992 3.047877 GGTAGGGTGTGTGTGCGC 61.048 66.667 0.00 0.00 0.00 6.09
5977 6993 3.411351 GTAGGGTGTGTGTGCGCG 61.411 66.667 0.00 0.00 0.00 6.86
5992 7008 4.760047 GCGCGTCATGGGGTCAGT 62.760 66.667 8.43 0.00 0.00 3.41
5993 7009 2.815211 CGCGTCATGGGGTCAGTG 60.815 66.667 0.00 0.00 0.00 3.66
5994 7010 2.347490 GCGTCATGGGGTCAGTGT 59.653 61.111 0.00 0.00 0.00 3.55
5995 7011 1.594833 GCGTCATGGGGTCAGTGTA 59.405 57.895 0.00 0.00 0.00 2.90
5996 7012 0.178068 GCGTCATGGGGTCAGTGTAT 59.822 55.000 0.00 0.00 0.00 2.29
5997 7013 1.939974 CGTCATGGGGTCAGTGTATG 58.060 55.000 0.00 0.00 0.00 2.39
5998 7014 1.207089 CGTCATGGGGTCAGTGTATGT 59.793 52.381 0.00 0.00 0.00 2.29
5999 7015 2.632377 GTCATGGGGTCAGTGTATGTG 58.368 52.381 0.00 0.00 0.00 3.21
6000 7016 1.065491 TCATGGGGTCAGTGTATGTGC 60.065 52.381 0.00 0.00 0.00 4.57
6001 7017 0.107703 ATGGGGTCAGTGTATGTGCG 60.108 55.000 0.00 0.00 0.00 5.34
6002 7018 1.295423 GGGGTCAGTGTATGTGCGT 59.705 57.895 0.00 0.00 0.00 5.24
6003 7019 0.533491 GGGGTCAGTGTATGTGCGTA 59.467 55.000 0.00 0.00 0.00 4.42
6004 7020 1.138266 GGGGTCAGTGTATGTGCGTAT 59.862 52.381 0.00 0.00 0.00 3.06
6005 7021 2.363038 GGGGTCAGTGTATGTGCGTATA 59.637 50.000 0.00 0.00 0.00 1.47
6006 7022 3.006537 GGGGTCAGTGTATGTGCGTATAT 59.993 47.826 0.00 0.00 0.00 0.86
6007 7023 4.219070 GGGGTCAGTGTATGTGCGTATATA 59.781 45.833 0.00 0.00 0.00 0.86
6008 7024 5.105473 GGGGTCAGTGTATGTGCGTATATAT 60.105 44.000 0.00 0.00 0.00 0.86
6009 7025 6.095860 GGGGTCAGTGTATGTGCGTATATATA 59.904 42.308 0.00 0.00 0.00 0.86
6010 7026 7.201884 GGGGTCAGTGTATGTGCGTATATATAT 60.202 40.741 0.00 0.00 0.00 0.86
6011 7027 7.648112 GGGTCAGTGTATGTGCGTATATATATG 59.352 40.741 5.44 7.49 0.00 1.78
6012 7028 8.403236 GGTCAGTGTATGTGCGTATATATATGA 58.597 37.037 14.94 0.00 0.00 2.15
6013 7029 9.439537 GTCAGTGTATGTGCGTATATATATGAG 57.560 37.037 14.94 0.81 0.00 2.90
6014 7030 9.174166 TCAGTGTATGTGCGTATATATATGAGT 57.826 33.333 14.94 1.53 0.00 3.41
6015 7031 9.226345 CAGTGTATGTGCGTATATATATGAGTG 57.774 37.037 14.94 3.05 0.00 3.51
6016 7032 7.915923 AGTGTATGTGCGTATATATATGAGTGC 59.084 37.037 14.94 4.80 0.00 4.40
6017 7033 7.915923 GTGTATGTGCGTATATATATGAGTGCT 59.084 37.037 14.94 0.00 0.00 4.40
6018 7034 8.466798 TGTATGTGCGTATATATATGAGTGCTT 58.533 33.333 14.94 3.82 0.00 3.91
6019 7035 7.761651 ATGTGCGTATATATATGAGTGCTTG 57.238 36.000 14.94 0.00 0.00 4.01
6020 7036 6.687604 TGTGCGTATATATATGAGTGCTTGT 58.312 36.000 14.94 0.00 0.00 3.16
6021 7037 6.586082 TGTGCGTATATATATGAGTGCTTGTG 59.414 38.462 14.94 0.00 0.00 3.33
6022 7038 6.586463 GTGCGTATATATATGAGTGCTTGTGT 59.414 38.462 14.94 0.00 0.00 3.72
6023 7039 7.116376 GTGCGTATATATATGAGTGCTTGTGTT 59.884 37.037 14.94 0.00 0.00 3.32
6024 7040 7.655732 TGCGTATATATATGAGTGCTTGTGTTT 59.344 33.333 14.94 0.00 0.00 2.83
6025 7041 7.952101 GCGTATATATATGAGTGCTTGTGTTTG 59.048 37.037 14.94 0.00 0.00 2.93
6026 7042 8.978539 CGTATATATATGAGTGCTTGTGTTTGT 58.021 33.333 6.13 0.00 0.00 2.83
6030 7046 4.818534 ATGAGTGCTTGTGTTTGTACTG 57.181 40.909 0.00 0.00 29.71 2.74
6031 7047 3.867857 TGAGTGCTTGTGTTTGTACTGA 58.132 40.909 0.00 0.00 29.71 3.41
6032 7048 4.450976 TGAGTGCTTGTGTTTGTACTGAT 58.549 39.130 0.00 0.00 29.71 2.90
6033 7049 5.606505 TGAGTGCTTGTGTTTGTACTGATA 58.393 37.500 0.00 0.00 29.71 2.15
6034 7050 6.230472 TGAGTGCTTGTGTTTGTACTGATAT 58.770 36.000 0.00 0.00 29.71 1.63
6035 7051 7.382898 TGAGTGCTTGTGTTTGTACTGATATA 58.617 34.615 0.00 0.00 29.71 0.86
6036 7052 7.875554 TGAGTGCTTGTGTTTGTACTGATATAA 59.124 33.333 0.00 0.00 29.71 0.98
6037 7053 8.615878 AGTGCTTGTGTTTGTACTGATATAAA 57.384 30.769 0.00 0.00 0.00 1.40
6038 7054 9.062524 AGTGCTTGTGTTTGTACTGATATAAAA 57.937 29.630 0.00 0.00 0.00 1.52
6039 7055 9.672086 GTGCTTGTGTTTGTACTGATATAAAAA 57.328 29.630 0.00 0.00 0.00 1.94
6058 7074 3.742433 AAAAATTCAATGCGGACCACA 57.258 38.095 0.00 0.00 0.00 4.17
6059 7075 3.959535 AAAATTCAATGCGGACCACAT 57.040 38.095 0.00 0.00 0.00 3.21
6060 7076 5.398603 AAAAATTCAATGCGGACCACATA 57.601 34.783 0.00 0.00 0.00 2.29
6061 7077 4.370364 AAATTCAATGCGGACCACATAC 57.630 40.909 0.00 0.00 0.00 2.39
6062 7078 2.481289 TTCAATGCGGACCACATACA 57.519 45.000 0.00 0.00 0.00 2.29
6063 7079 2.022764 TCAATGCGGACCACATACAG 57.977 50.000 0.00 0.00 0.00 2.74
6064 7080 1.552792 TCAATGCGGACCACATACAGA 59.447 47.619 0.00 0.00 0.00 3.41
6065 7081 1.935873 CAATGCGGACCACATACAGAG 59.064 52.381 0.00 0.00 0.00 3.35
6066 7082 1.195115 ATGCGGACCACATACAGAGT 58.805 50.000 0.00 0.00 0.00 3.24
6067 7083 1.842052 TGCGGACCACATACAGAGTA 58.158 50.000 0.00 0.00 0.00 2.59
6068 7084 2.172679 TGCGGACCACATACAGAGTAA 58.827 47.619 0.00 0.00 0.00 2.24
6069 7085 2.563620 TGCGGACCACATACAGAGTAAA 59.436 45.455 0.00 0.00 0.00 2.01
6070 7086 3.007074 TGCGGACCACATACAGAGTAAAA 59.993 43.478 0.00 0.00 0.00 1.52
6071 7087 4.189231 GCGGACCACATACAGAGTAAAAT 58.811 43.478 0.00 0.00 0.00 1.82
6072 7088 4.034048 GCGGACCACATACAGAGTAAAATG 59.966 45.833 0.00 0.00 0.00 2.32
6073 7089 5.416083 CGGACCACATACAGAGTAAAATGA 58.584 41.667 0.00 0.00 0.00 2.57
6074 7090 5.520288 CGGACCACATACAGAGTAAAATGAG 59.480 44.000 0.00 0.00 0.00 2.90
6075 7091 6.407202 GGACCACATACAGAGTAAAATGAGT 58.593 40.000 0.00 0.00 0.00 3.41
6076 7092 6.313905 GGACCACATACAGAGTAAAATGAGTG 59.686 42.308 0.00 0.00 0.00 3.51
6077 7093 7.004555 ACCACATACAGAGTAAAATGAGTGA 57.995 36.000 0.00 0.00 0.00 3.41
6078 7094 7.450074 ACCACATACAGAGTAAAATGAGTGAA 58.550 34.615 0.00 0.00 0.00 3.18
6079 7095 8.103305 ACCACATACAGAGTAAAATGAGTGAAT 58.897 33.333 0.00 0.00 0.00 2.57
6080 7096 8.607459 CCACATACAGAGTAAAATGAGTGAATC 58.393 37.037 0.00 0.00 0.00 2.52
6081 7097 9.376075 CACATACAGAGTAAAATGAGTGAATCT 57.624 33.333 0.00 0.00 0.00 2.40
6082 7098 9.593134 ACATACAGAGTAAAATGAGTGAATCTC 57.407 33.333 0.00 0.00 43.03 2.75
6083 7099 9.039870 CATACAGAGTAAAATGAGTGAATCTCC 57.960 37.037 0.00 0.00 42.12 3.71
6084 7100 7.009179 ACAGAGTAAAATGAGTGAATCTCCA 57.991 36.000 0.00 0.00 42.12 3.86
6085 7101 6.876257 ACAGAGTAAAATGAGTGAATCTCCAC 59.124 38.462 0.00 0.00 42.12 4.02
6087 7103 8.253810 CAGAGTAAAATGAGTGAATCTCCACTA 58.746 37.037 0.00 0.00 46.45 2.74
6088 7104 8.816894 AGAGTAAAATGAGTGAATCTCCACTAA 58.183 33.333 0.00 0.00 46.45 2.24
6089 7105 9.436957 GAGTAAAATGAGTGAATCTCCACTAAA 57.563 33.333 0.00 0.00 46.45 1.85
6090 7106 9.793259 AGTAAAATGAGTGAATCTCCACTAAAA 57.207 29.630 0.00 0.00 46.45 1.52
6164 7180 9.574577 ACACATATATATTTAGGAATGGAGGGA 57.425 33.333 0.00 0.00 0.00 4.20
6166 7182 9.805204 ACATATATATTTAGGAATGGAGGGAGT 57.195 33.333 0.00 0.00 0.00 3.85
6176 7192 9.953429 TTAGGAATGGAGGGAGTATATATTAGG 57.047 37.037 0.00 0.00 0.00 2.69
6177 7193 6.847036 AGGAATGGAGGGAGTATATATTAGGC 59.153 42.308 0.00 0.00 0.00 3.93
6178 7194 6.847036 GGAATGGAGGGAGTATATATTAGGCT 59.153 42.308 0.00 0.00 0.00 4.58
6179 7195 7.202047 GGAATGGAGGGAGTATATATTAGGCTG 60.202 44.444 0.00 0.00 0.00 4.85
6180 7196 4.962995 TGGAGGGAGTATATATTAGGCTGC 59.037 45.833 0.00 0.00 0.00 5.25
6181 7197 5.212745 GGAGGGAGTATATATTAGGCTGCT 58.787 45.833 0.00 0.00 0.00 4.24
6182 7198 5.663556 GGAGGGAGTATATATTAGGCTGCTT 59.336 44.000 0.00 0.00 0.00 3.91
6183 7199 6.407525 GGAGGGAGTATATATTAGGCTGCTTG 60.408 46.154 0.00 0.00 0.00 4.01
6184 7200 6.026186 AGGGAGTATATATTAGGCTGCTTGT 58.974 40.000 0.00 0.00 0.00 3.16
6185 7201 6.155393 AGGGAGTATATATTAGGCTGCTTGTC 59.845 42.308 0.00 0.00 0.00 3.18
6186 7202 6.342111 GGAGTATATATTAGGCTGCTTGTCC 58.658 44.000 0.00 0.00 0.00 4.02
6187 7203 6.155393 GGAGTATATATTAGGCTGCTTGTCCT 59.845 42.308 0.00 0.00 36.51 3.85
6188 7204 7.176589 AGTATATATTAGGCTGCTTGTCCTC 57.823 40.000 0.00 0.00 34.02 3.71
6189 7205 6.957020 AGTATATATTAGGCTGCTTGTCCTCT 59.043 38.462 0.00 0.00 34.02 3.69
6190 7206 8.116669 AGTATATATTAGGCTGCTTGTCCTCTA 58.883 37.037 0.00 0.00 34.02 2.43
6191 7207 7.986553 ATATATTAGGCTGCTTGTCCTCTAT 57.013 36.000 0.00 0.00 34.02 1.98
6192 7208 6.694445 ATATTAGGCTGCTTGTCCTCTATT 57.306 37.500 0.00 0.00 34.02 1.73
6193 7209 4.844349 TTAGGCTGCTTGTCCTCTATTT 57.156 40.909 0.00 0.00 34.02 1.40
6194 7210 2.996631 AGGCTGCTTGTCCTCTATTTG 58.003 47.619 0.00 0.00 0.00 2.32
6195 7211 2.573462 AGGCTGCTTGTCCTCTATTTGA 59.427 45.455 0.00 0.00 0.00 2.69
6196 7212 2.941720 GGCTGCTTGTCCTCTATTTGAG 59.058 50.000 0.00 0.00 42.30 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
143 144 4.786425 AGAAGAGCTTTTCTTGTGGAAGT 58.214 39.130 13.53 0.00 46.12 3.01
261 270 3.540367 GAACGAAACCGGGCTCCCA 62.540 63.158 6.32 0.00 35.37 4.37
266 275 1.196127 CTAACAAGAACGAAACCGGGC 59.804 52.381 6.32 0.00 0.00 6.13
271 280 6.818416 ACGATGAATCTAACAAGAACGAAAC 58.182 36.000 0.00 0.00 0.00 2.78
301 312 1.003866 GTCGTTTCCACACAAGCTCAC 60.004 52.381 0.00 0.00 0.00 3.51
315 327 3.129988 CCTACTAAGGGACATCGTCGTTT 59.870 47.826 0.00 0.00 39.48 3.60
317 329 2.092753 TCCTACTAAGGGACATCGTCGT 60.093 50.000 0.00 0.00 43.84 4.34
420 451 0.908910 ATCCACCGAATACCAGCACA 59.091 50.000 0.00 0.00 0.00 4.57
458 509 1.132834 ACACCCAAACGAAAACGAACC 59.867 47.619 0.00 0.00 0.00 3.62
465 516 5.388408 AACTTGTAAACACCCAAACGAAA 57.612 34.783 0.00 0.00 0.00 3.46
471 522 5.127491 AGAATCGAACTTGTAAACACCCAA 58.873 37.500 0.00 0.00 0.00 4.12
488 539 6.674694 AAAAGTCATGGATCAGAAGAATCG 57.325 37.500 0.00 0.00 0.00 3.34
529 580 1.079819 GAGCAGCGCACCAGAGTAA 60.080 57.895 11.47 0.00 0.00 2.24
569 620 2.367486 AGTAGTAGACAGTCGGGAAGC 58.633 52.381 0.00 0.00 0.00 3.86
589 640 2.036733 CCAGAGTCGGACAAACCTTGTA 59.963 50.000 11.27 0.00 45.52 2.41
608 659 0.614697 TCATCGCCTCTTCCTCACCA 60.615 55.000 0.00 0.00 0.00 4.17
619 670 3.785859 ACACCGCCATCATCGCCT 61.786 61.111 0.00 0.00 0.00 5.52
674 726 2.691409 ATTACATGTCCGTGGACCAG 57.309 50.000 16.12 10.76 43.97 4.00
744 800 5.772521 TGCAGGATAGAAAAACTTTCAAGC 58.227 37.500 2.25 0.00 32.92 4.01
745 801 8.647143 TTTTGCAGGATAGAAAAACTTTCAAG 57.353 30.769 2.25 0.00 0.00 3.02
817 873 6.577427 GCAAAATACGAACCTAAACTGAACTG 59.423 38.462 0.00 0.00 0.00 3.16
851 907 4.282873 CGTGCTTTCTGGTTTCTTTCTTC 58.717 43.478 0.00 0.00 0.00 2.87
1071 1127 4.742201 TCCAGCTCGCGGCAGTTC 62.742 66.667 19.30 0.00 44.79 3.01
1117 1173 3.369388 GGAGGGAGGGAGGAGGGT 61.369 72.222 0.00 0.00 0.00 4.34
1135 1193 2.184830 CACAGCGCATGAGATGGGG 61.185 63.158 18.89 6.92 42.79 4.96
1231 1289 0.324368 GAAAACCAGATCCCACCCCC 60.324 60.000 0.00 0.00 0.00 5.40
1234 1292 0.037734 ACGGAAAACCAGATCCCACC 59.962 55.000 0.00 0.00 31.73 4.61
1235 1293 1.165270 CACGGAAAACCAGATCCCAC 58.835 55.000 0.00 0.00 31.73 4.61
1300 1359 1.891919 GGCACGCAACTCCTGAACA 60.892 57.895 0.00 0.00 0.00 3.18
1324 1383 1.664649 CAAGCCGTGCTCGAGACAA 60.665 57.895 18.75 0.00 38.25 3.18
1327 1386 4.069232 CCCAAGCCGTGCTCGAGA 62.069 66.667 18.75 0.00 38.25 4.04
1447 1512 4.864633 TGTTGTTCGCATCTTGCAAAATA 58.135 34.783 0.00 0.00 45.36 1.40
1468 1533 6.780457 ATAACACTTCATCCCAAATTCCTG 57.220 37.500 0.00 0.00 0.00 3.86
1506 1571 4.421948 GTCTCACCCTAATCTACGTGTTG 58.578 47.826 0.00 0.00 0.00 3.33
1508 1573 2.681848 CGTCTCACCCTAATCTACGTGT 59.318 50.000 0.00 0.00 0.00 4.49
1511 1576 1.607628 CCCGTCTCACCCTAATCTACG 59.392 57.143 0.00 0.00 0.00 3.51
1555 1620 2.217429 ACAAAACGCAAATGGTGGAC 57.783 45.000 0.00 0.00 0.00 4.02
1558 1623 4.363999 TCCTAAACAAAACGCAAATGGTG 58.636 39.130 0.00 0.00 0.00 4.17
1630 1696 9.807649 AAATAAAGCCAAATGACTAGCTAAATG 57.192 29.630 0.00 0.00 34.49 2.32
1652 1718 7.857734 ATCAATTACATCACGACCACAAATA 57.142 32.000 0.00 0.00 0.00 1.40
1675 1741 7.902920 ATGAACTGCCAAACCAGATAATAAT 57.097 32.000 0.00 0.00 36.67 1.28
1676 1742 8.815565 TTATGAACTGCCAAACCAGATAATAA 57.184 30.769 0.00 0.00 36.67 1.40
1677 1743 8.995027 ATTATGAACTGCCAAACCAGATAATA 57.005 30.769 0.00 0.00 36.67 0.98
1700 1766 4.647611 TCACCACGATGGAAAACACTATT 58.352 39.130 10.46 0.00 40.96 1.73
1817 1883 3.405831 CAAATCTGAGCTCCTTGACACA 58.594 45.455 12.15 0.00 0.00 3.72
2093 2168 6.402550 CCAAATCATATAAGGCAGACGCATAC 60.403 42.308 0.00 0.00 41.24 2.39
2255 2331 2.119801 ACTGGCATCATCTCCAACAC 57.880 50.000 0.00 0.00 30.98 3.32
2439 2913 9.388506 CAGGACAAGAGAAACAAGATATTATGT 57.611 33.333 0.00 0.00 0.00 2.29
2504 2978 9.334947 CTGTCCATAGTTCAACATAATCTTCAT 57.665 33.333 0.00 0.00 0.00 2.57
2606 3080 6.823678 TTATCGTAATCTTTCTTCGCCTTC 57.176 37.500 0.00 0.00 0.00 3.46
3102 3969 6.020121 CAGAATTTCAAAACTGTGCTGAACTG 60.020 38.462 0.00 5.90 0.00 3.16
3318 4212 9.724261 ACTACCTTTGGTGGTTTAATCCCAACA 62.724 40.741 8.04 8.04 44.97 3.33
3371 4265 8.607441 TTGTCTAAGCTAACTGCATAATATGG 57.393 34.615 2.13 0.00 45.94 2.74
3457 4351 0.811616 GTGGGCCATAGAGCAGAACG 60.812 60.000 10.70 0.00 0.00 3.95
3844 4738 4.144297 TGGAGCAGAATATATTTGGCCAC 58.856 43.478 3.88 10.55 0.00 5.01
3867 4761 7.218145 TCGCGCAAAAACTTAAAATAACAAA 57.782 28.000 8.75 0.00 0.00 2.83
3874 4768 5.688176 AGCTAATTCGCGCAAAAACTTAAAA 59.312 32.000 8.75 0.00 34.40 1.52
3875 4769 5.116377 CAGCTAATTCGCGCAAAAACTTAAA 59.884 36.000 8.75 0.00 34.40 1.52
3879 4773 2.031157 ACAGCTAATTCGCGCAAAAACT 60.031 40.909 8.75 0.00 34.40 2.66
3884 4778 2.287393 TCTACAGCTAATTCGCGCAA 57.713 45.000 8.75 0.78 34.40 4.85
3889 4783 6.071334 TCCCCTAATGATCTACAGCTAATTCG 60.071 42.308 0.00 0.00 0.00 3.34
4267 5186 3.608316 AGCTGCCACAAAACAGAAAAA 57.392 38.095 0.00 0.00 35.90 1.94
4268 5187 4.501229 CCATAGCTGCCACAAAACAGAAAA 60.501 41.667 0.00 0.00 35.90 2.29
4327 5246 6.968131 TTCAGTAAGCATTGTATCACTGTC 57.032 37.500 0.00 0.00 35.88 3.51
4463 5388 6.963049 AATCAACTACTCGATACAACCAAC 57.037 37.500 0.00 0.00 0.00 3.77
4464 5389 7.093640 ACCTAATCAACTACTCGATACAACCAA 60.094 37.037 0.00 0.00 0.00 3.67
4465 5390 6.379133 ACCTAATCAACTACTCGATACAACCA 59.621 38.462 0.00 0.00 0.00 3.67
4466 5391 6.803642 ACCTAATCAACTACTCGATACAACC 58.196 40.000 0.00 0.00 0.00 3.77
4509 5434 4.825085 TCAGGTTTCTACACAACAATTCCC 59.175 41.667 0.00 0.00 0.00 3.97
4511 5436 6.861065 TCTCAGGTTTCTACACAACAATTC 57.139 37.500 0.00 0.00 0.00 2.17
4512 5437 7.556275 TCTTTCTCAGGTTTCTACACAACAATT 59.444 33.333 0.00 0.00 0.00 2.32
4514 5439 6.411376 TCTTTCTCAGGTTTCTACACAACAA 58.589 36.000 0.00 0.00 0.00 2.83
4515 5440 5.984725 TCTTTCTCAGGTTTCTACACAACA 58.015 37.500 0.00 0.00 0.00 3.33
4516 5441 8.779354 ATATCTTTCTCAGGTTTCTACACAAC 57.221 34.615 0.00 0.00 0.00 3.32
4647 5574 3.357021 CACGCATGATTCACATAAGCAC 58.643 45.455 0.00 0.00 37.46 4.40
4792 5729 2.027385 GCATGGATTTTCAGGACCTCC 58.973 52.381 0.00 0.00 0.00 4.30
4846 5783 1.021390 CCAGCTTAACCACAGCCTCG 61.021 60.000 0.00 0.00 38.09 4.63
4884 5821 5.909477 TGAGGTGGTGAATATAGGTTAACG 58.091 41.667 0.00 0.00 0.00 3.18
4889 5826 5.513788 GCATGATGAGGTGGTGAATATAGGT 60.514 44.000 0.00 0.00 0.00 3.08
4897 5834 0.253894 CCAGCATGATGAGGTGGTGA 59.746 55.000 13.69 0.00 46.70 4.02
4898 5835 2.789842 CCAGCATGATGAGGTGGTG 58.210 57.895 13.69 0.00 46.70 4.17
4934 5871 2.504175 GCCCTGGAACCATACAGAGTTA 59.496 50.000 0.00 0.00 36.86 2.24
4935 5872 1.282157 GCCCTGGAACCATACAGAGTT 59.718 52.381 0.00 0.00 36.86 3.01
4936 5873 0.912486 GCCCTGGAACCATACAGAGT 59.088 55.000 0.00 0.00 36.86 3.24
4937 5874 1.207791 AGCCCTGGAACCATACAGAG 58.792 55.000 0.00 0.00 36.86 3.35
4939 5876 1.281867 TGAAGCCCTGGAACCATACAG 59.718 52.381 0.00 0.00 34.54 2.74
4940 5877 1.367346 TGAAGCCCTGGAACCATACA 58.633 50.000 0.00 0.00 0.00 2.29
5062 5999 6.959639 TGAACAGGTAGAAAGAAAGCAAAT 57.040 33.333 0.00 0.00 0.00 2.32
5106 6049 3.044235 TGCCAGACATTGTAGTGAGTG 57.956 47.619 0.00 0.00 0.00 3.51
5141 6085 1.798813 GCGTCATTCAACTTCCGAACT 59.201 47.619 0.00 0.00 0.00 3.01
5144 6088 0.034198 TGGCGTCATTCAACTTCCGA 59.966 50.000 0.00 0.00 0.00 4.55
5280 6229 0.397941 TCTATATCGTCGGGGTCGGT 59.602 55.000 0.00 0.00 36.95 4.69
5284 6233 3.493334 TGATGTTCTATATCGTCGGGGT 58.507 45.455 0.00 0.00 0.00 4.95
5366 6317 5.805486 GGTTTCAGACCTGTTTCAACTTTTC 59.195 40.000 0.00 0.00 45.55 2.29
5390 6341 9.893305 AATTTTGTAAATCTAAGAAACCAGTCG 57.107 29.630 0.00 0.00 0.00 4.18
5465 6418 3.502211 ACAGGAAGAAATCGCGAATGTTT 59.498 39.130 15.24 9.77 0.00 2.83
5472 6425 2.189342 GAGAGACAGGAAGAAATCGCG 58.811 52.381 0.00 0.00 0.00 5.87
5493 6493 7.272978 TCATTTATTCCCAGCTAGAGTAACAC 58.727 38.462 0.00 0.00 0.00 3.32
5504 6504 3.374745 CGCACATTCATTTATTCCCAGC 58.625 45.455 0.00 0.00 0.00 4.85
5508 6508 5.043248 CCTTTCCGCACATTCATTTATTCC 58.957 41.667 0.00 0.00 0.00 3.01
5513 6513 3.611530 CGTTCCTTTCCGCACATTCATTT 60.612 43.478 0.00 0.00 0.00 2.32
5516 6516 0.871722 CGTTCCTTTCCGCACATTCA 59.128 50.000 0.00 0.00 0.00 2.57
5525 6525 0.660300 CGCTGCAAACGTTCCTTTCC 60.660 55.000 0.00 0.00 0.00 3.13
5526 6526 0.028902 ACGCTGCAAACGTTCCTTTC 59.971 50.000 0.00 0.00 41.93 2.62
5592 6608 2.552155 GGAATGCGTCCCCAATATAGCA 60.552 50.000 0.00 0.00 41.10 3.49
5596 6612 0.472471 ACGGAATGCGTCCCCAATAT 59.528 50.000 0.00 0.00 44.60 1.28
5597 6613 0.253610 AACGGAATGCGTCCCCAATA 59.746 50.000 0.00 0.00 44.60 1.90
5598 6614 0.610785 AAACGGAATGCGTCCCCAAT 60.611 50.000 0.00 0.00 44.60 3.16
5600 6616 1.673009 GAAACGGAATGCGTCCCCA 60.673 57.895 0.00 0.00 44.60 4.96
5650 6666 1.211709 GTTAACCACGGCCATGTGC 59.788 57.895 2.24 0.00 38.55 4.57
5695 6711 2.892852 AGTTGGTTCACATCCACATTGG 59.107 45.455 0.00 0.00 39.43 3.16
5696 6712 4.202141 ACAAGTTGGTTCACATCCACATTG 60.202 41.667 7.96 0.00 37.02 2.82
5697 6713 3.960102 ACAAGTTGGTTCACATCCACATT 59.040 39.130 7.96 0.00 34.45 2.71
5698 6714 3.318839 CACAAGTTGGTTCACATCCACAT 59.681 43.478 7.96 0.00 34.45 3.21
5699 6715 2.687425 CACAAGTTGGTTCACATCCACA 59.313 45.455 7.96 0.00 34.45 4.17
5700 6716 2.034558 CCACAAGTTGGTTCACATCCAC 59.965 50.000 7.96 0.00 41.10 4.02
5701 6717 2.305928 CCACAAGTTGGTTCACATCCA 58.694 47.619 7.96 0.00 41.10 3.41
5726 6742 4.287326 ACAAGTTGGTTTTCCCCTCAAAAA 59.713 37.500 7.96 0.00 39.73 1.94
5727 6743 3.841255 ACAAGTTGGTTTTCCCCTCAAAA 59.159 39.130 7.96 0.00 39.73 2.44
5728 6744 3.196685 CACAAGTTGGTTTTCCCCTCAAA 59.803 43.478 7.96 0.00 39.73 2.69
5729 6745 2.763448 CACAAGTTGGTTTTCCCCTCAA 59.237 45.455 7.96 0.00 39.73 3.02
5730 6746 2.383855 CACAAGTTGGTTTTCCCCTCA 58.616 47.619 7.96 0.00 39.73 3.86
5731 6747 1.686587 CCACAAGTTGGTTTTCCCCTC 59.313 52.381 7.96 0.00 41.10 4.30
5732 6748 1.788229 CCACAAGTTGGTTTTCCCCT 58.212 50.000 7.96 0.00 41.10 4.79
5743 6759 4.447138 TCTAACCATCCAACCACAAGTT 57.553 40.909 0.00 0.00 40.16 2.66
5744 6760 4.104102 TCTTCTAACCATCCAACCACAAGT 59.896 41.667 0.00 0.00 0.00 3.16
5745 6761 4.651778 TCTTCTAACCATCCAACCACAAG 58.348 43.478 0.00 0.00 0.00 3.16
5746 6762 4.715534 TCTTCTAACCATCCAACCACAA 57.284 40.909 0.00 0.00 0.00 3.33
5747 6763 4.715534 TTCTTCTAACCATCCAACCACA 57.284 40.909 0.00 0.00 0.00 4.17
5748 6764 5.070685 ACTTTCTTCTAACCATCCAACCAC 58.929 41.667 0.00 0.00 0.00 4.16
5749 6765 5.319043 ACTTTCTTCTAACCATCCAACCA 57.681 39.130 0.00 0.00 0.00 3.67
5750 6766 5.048013 CCAACTTTCTTCTAACCATCCAACC 60.048 44.000 0.00 0.00 0.00 3.77
5751 6767 5.535030 ACCAACTTTCTTCTAACCATCCAAC 59.465 40.000 0.00 0.00 0.00 3.77
5752 6768 5.701224 ACCAACTTTCTTCTAACCATCCAA 58.299 37.500 0.00 0.00 0.00 3.53
5753 6769 5.319043 ACCAACTTTCTTCTAACCATCCA 57.681 39.130 0.00 0.00 0.00 3.41
5754 6770 5.048013 CCAACCAACTTTCTTCTAACCATCC 60.048 44.000 0.00 0.00 0.00 3.51
5755 6771 5.768164 TCCAACCAACTTTCTTCTAACCATC 59.232 40.000 0.00 0.00 0.00 3.51
5756 6772 5.701224 TCCAACCAACTTTCTTCTAACCAT 58.299 37.500 0.00 0.00 0.00 3.55
5757 6773 5.118729 TCCAACCAACTTTCTTCTAACCA 57.881 39.130 0.00 0.00 0.00 3.67
5758 6774 5.048013 CCATCCAACCAACTTTCTTCTAACC 60.048 44.000 0.00 0.00 0.00 2.85
5759 6775 5.535030 ACCATCCAACCAACTTTCTTCTAAC 59.465 40.000 0.00 0.00 0.00 2.34
5760 6776 5.534654 CACCATCCAACCAACTTTCTTCTAA 59.465 40.000 0.00 0.00 0.00 2.10
5761 6777 5.070001 CACCATCCAACCAACTTTCTTCTA 58.930 41.667 0.00 0.00 0.00 2.10
5762 6778 3.891366 CACCATCCAACCAACTTTCTTCT 59.109 43.478 0.00 0.00 0.00 2.85
5763 6779 3.005791 CCACCATCCAACCAACTTTCTTC 59.994 47.826 0.00 0.00 0.00 2.87
5764 6780 2.965147 CCACCATCCAACCAACTTTCTT 59.035 45.455 0.00 0.00 0.00 2.52
5765 6781 2.091333 ACCACCATCCAACCAACTTTCT 60.091 45.455 0.00 0.00 0.00 2.52
5766 6782 2.316108 ACCACCATCCAACCAACTTTC 58.684 47.619 0.00 0.00 0.00 2.62
5767 6783 2.470057 ACCACCATCCAACCAACTTT 57.530 45.000 0.00 0.00 0.00 2.66
5768 6784 3.825908 ATACCACCATCCAACCAACTT 57.174 42.857 0.00 0.00 0.00 2.66
5769 6785 3.333680 AGAATACCACCATCCAACCAACT 59.666 43.478 0.00 0.00 0.00 3.16
5770 6786 3.694566 GAGAATACCACCATCCAACCAAC 59.305 47.826 0.00 0.00 0.00 3.77
5771 6787 3.332187 TGAGAATACCACCATCCAACCAA 59.668 43.478 0.00 0.00 0.00 3.67
5772 6788 2.916269 TGAGAATACCACCATCCAACCA 59.084 45.455 0.00 0.00 0.00 3.67
5773 6789 3.644966 TGAGAATACCACCATCCAACC 57.355 47.619 0.00 0.00 0.00 3.77
5774 6790 3.694566 GGTTGAGAATACCACCATCCAAC 59.305 47.826 0.00 0.00 35.67 3.77
5775 6791 3.621214 CGGTTGAGAATACCACCATCCAA 60.621 47.826 0.00 0.00 35.31 3.53
5776 6792 2.093181 CGGTTGAGAATACCACCATCCA 60.093 50.000 0.00 0.00 35.31 3.41
5777 6793 2.561569 CGGTTGAGAATACCACCATCC 58.438 52.381 0.00 0.00 35.31 3.51
5778 6794 1.940613 GCGGTTGAGAATACCACCATC 59.059 52.381 0.00 0.00 35.31 3.51
5779 6795 1.280710 TGCGGTTGAGAATACCACCAT 59.719 47.619 0.00 0.00 35.31 3.55
5780 6796 0.687920 TGCGGTTGAGAATACCACCA 59.312 50.000 0.00 0.00 35.31 4.17
5781 6797 2.038387 ATGCGGTTGAGAATACCACC 57.962 50.000 0.00 0.00 35.31 4.61
5782 6798 5.751243 ATAAATGCGGTTGAGAATACCAC 57.249 39.130 0.00 0.00 35.31 4.16
5783 6799 6.038161 CAGAATAAATGCGGTTGAGAATACCA 59.962 38.462 0.00 0.00 35.31 3.25
5784 6800 6.430451 CAGAATAAATGCGGTTGAGAATACC 58.570 40.000 0.00 0.00 0.00 2.73
5785 6801 6.260050 TCCAGAATAAATGCGGTTGAGAATAC 59.740 38.462 0.00 0.00 0.00 1.89
5786 6802 6.353323 TCCAGAATAAATGCGGTTGAGAATA 58.647 36.000 0.00 0.00 0.00 1.75
5787 6803 5.192927 TCCAGAATAAATGCGGTTGAGAAT 58.807 37.500 0.00 0.00 0.00 2.40
5788 6804 4.584874 TCCAGAATAAATGCGGTTGAGAA 58.415 39.130 0.00 0.00 0.00 2.87
5789 6805 4.214986 TCCAGAATAAATGCGGTTGAGA 57.785 40.909 0.00 0.00 0.00 3.27
5790 6806 5.505173 AATCCAGAATAAATGCGGTTGAG 57.495 39.130 0.00 0.00 0.00 3.02
5791 6807 5.913137 AAATCCAGAATAAATGCGGTTGA 57.087 34.783 0.00 0.00 0.00 3.18
5792 6808 8.647143 AAATAAATCCAGAATAAATGCGGTTG 57.353 30.769 0.00 0.00 0.00 3.77
5793 6809 8.474025 TGAAATAAATCCAGAATAAATGCGGTT 58.526 29.630 0.00 0.00 0.00 4.44
5794 6810 8.006298 TGAAATAAATCCAGAATAAATGCGGT 57.994 30.769 0.00 0.00 0.00 5.68
5795 6811 7.596248 CCTGAAATAAATCCAGAATAAATGCGG 59.404 37.037 0.00 0.00 0.00 5.69
5796 6812 8.352201 TCCTGAAATAAATCCAGAATAAATGCG 58.648 33.333 0.00 0.00 0.00 4.73
5803 6819 8.416329 CCGAAAATCCTGAAATAAATCCAGAAT 58.584 33.333 0.00 0.00 0.00 2.40
5804 6820 7.630513 GCCGAAAATCCTGAAATAAATCCAGAA 60.631 37.037 0.00 0.00 0.00 3.02
5805 6821 6.183360 GCCGAAAATCCTGAAATAAATCCAGA 60.183 38.462 0.00 0.00 0.00 3.86
5806 6822 5.979517 GCCGAAAATCCTGAAATAAATCCAG 59.020 40.000 0.00 0.00 0.00 3.86
5807 6823 5.420421 TGCCGAAAATCCTGAAATAAATCCA 59.580 36.000 0.00 0.00 0.00 3.41
5808 6824 5.901552 TGCCGAAAATCCTGAAATAAATCC 58.098 37.500 0.00 0.00 0.00 3.01
5809 6825 9.696917 ATATTGCCGAAAATCCTGAAATAAATC 57.303 29.630 0.00 0.00 0.00 2.17
5810 6826 9.696917 GATATTGCCGAAAATCCTGAAATAAAT 57.303 29.630 0.00 0.00 0.00 1.40
5811 6827 7.860373 CGATATTGCCGAAAATCCTGAAATAAA 59.140 33.333 0.00 0.00 0.00 1.40
5812 6828 7.012894 ACGATATTGCCGAAAATCCTGAAATAA 59.987 33.333 0.00 0.00 0.00 1.40
5813 6829 6.485313 ACGATATTGCCGAAAATCCTGAAATA 59.515 34.615 0.00 0.00 0.00 1.40
5814 6830 5.299279 ACGATATTGCCGAAAATCCTGAAAT 59.701 36.000 0.00 0.00 0.00 2.17
5815 6831 4.638421 ACGATATTGCCGAAAATCCTGAAA 59.362 37.500 0.00 0.00 0.00 2.69
5816 6832 4.196193 ACGATATTGCCGAAAATCCTGAA 58.804 39.130 0.00 0.00 0.00 3.02
5817 6833 3.804036 ACGATATTGCCGAAAATCCTGA 58.196 40.909 0.00 0.00 0.00 3.86
5818 6834 4.552166 AACGATATTGCCGAAAATCCTG 57.448 40.909 0.00 0.00 0.00 3.86
5819 6835 5.576447 AAAACGATATTGCCGAAAATCCT 57.424 34.783 0.00 0.00 0.00 3.24
5840 6856 5.338463 CCACAAGTTGGTTTTCCCCTAAAAA 60.338 40.000 7.96 0.00 41.10 1.94
5841 6857 4.162509 CCACAAGTTGGTTTTCCCCTAAAA 59.837 41.667 7.96 0.00 41.10 1.52
5842 6858 3.707102 CCACAAGTTGGTTTTCCCCTAAA 59.293 43.478 7.96 0.00 41.10 1.85
5843 6859 3.301274 CCACAAGTTGGTTTTCCCCTAA 58.699 45.455 7.96 0.00 41.10 2.69
5844 6860 2.952116 CCACAAGTTGGTTTTCCCCTA 58.048 47.619 7.96 0.00 41.10 3.53
5845 6861 1.788229 CCACAAGTTGGTTTTCCCCT 58.212 50.000 7.96 0.00 41.10 4.79
5856 6872 4.447138 TCTAACCATCCAACCACAAGTT 57.553 40.909 0.00 0.00 40.16 2.66
5857 6873 4.104102 TCTTCTAACCATCCAACCACAAGT 59.896 41.667 0.00 0.00 0.00 3.16
5858 6874 4.651778 TCTTCTAACCATCCAACCACAAG 58.348 43.478 0.00 0.00 0.00 3.16
5859 6875 4.715534 TCTTCTAACCATCCAACCACAA 57.284 40.909 0.00 0.00 0.00 3.33
5860 6876 4.715534 TTCTTCTAACCATCCAACCACA 57.284 40.909 0.00 0.00 0.00 4.17
5861 6877 5.070685 ACTTTCTTCTAACCATCCAACCAC 58.929 41.667 0.00 0.00 0.00 4.16
5862 6878 5.319043 ACTTTCTTCTAACCATCCAACCA 57.681 39.130 0.00 0.00 0.00 3.67
5863 6879 5.048013 CCAACTTTCTTCTAACCATCCAACC 60.048 44.000 0.00 0.00 0.00 3.77
5864 6880 5.535030 ACCAACTTTCTTCTAACCATCCAAC 59.465 40.000 0.00 0.00 0.00 3.77
5865 6881 5.701224 ACCAACTTTCTTCTAACCATCCAA 58.299 37.500 0.00 0.00 0.00 3.53
5866 6882 5.319043 ACCAACTTTCTTCTAACCATCCA 57.681 39.130 0.00 0.00 0.00 3.41
5867 6883 5.048013 CCAACCAACTTTCTTCTAACCATCC 60.048 44.000 0.00 0.00 0.00 3.51
5868 6884 5.768164 TCCAACCAACTTTCTTCTAACCATC 59.232 40.000 0.00 0.00 0.00 3.51
5869 6885 5.701224 TCCAACCAACTTTCTTCTAACCAT 58.299 37.500 0.00 0.00 0.00 3.55
5870 6886 5.118729 TCCAACCAACTTTCTTCTAACCA 57.881 39.130 0.00 0.00 0.00 3.67
5871 6887 5.048013 CCATCCAACCAACTTTCTTCTAACC 60.048 44.000 0.00 0.00 0.00 2.85
5872 6888 5.535030 ACCATCCAACCAACTTTCTTCTAAC 59.465 40.000 0.00 0.00 0.00 2.34
5873 6889 5.534654 CACCATCCAACCAACTTTCTTCTAA 59.465 40.000 0.00 0.00 0.00 2.10
5874 6890 5.070001 CACCATCCAACCAACTTTCTTCTA 58.930 41.667 0.00 0.00 0.00 2.10
5875 6891 3.891366 CACCATCCAACCAACTTTCTTCT 59.109 43.478 0.00 0.00 0.00 2.85
5876 6892 3.005791 CCACCATCCAACCAACTTTCTTC 59.994 47.826 0.00 0.00 0.00 2.87
5877 6893 2.965147 CCACCATCCAACCAACTTTCTT 59.035 45.455 0.00 0.00 0.00 2.52
5878 6894 2.091333 ACCACCATCCAACCAACTTTCT 60.091 45.455 0.00 0.00 0.00 2.52
5879 6895 2.316108 ACCACCATCCAACCAACTTTC 58.684 47.619 0.00 0.00 0.00 2.62
5880 6896 2.470057 ACCACCATCCAACCAACTTT 57.530 45.000 0.00 0.00 0.00 2.66
5881 6897 3.825908 ATACCACCATCCAACCAACTT 57.174 42.857 0.00 0.00 0.00 2.66
5882 6898 3.333680 AGAATACCACCATCCAACCAACT 59.666 43.478 0.00 0.00 0.00 3.16
5883 6899 3.694566 GAGAATACCACCATCCAACCAAC 59.305 47.826 0.00 0.00 0.00 3.77
5884 6900 3.332187 TGAGAATACCACCATCCAACCAA 59.668 43.478 0.00 0.00 0.00 3.67
5885 6901 2.916269 TGAGAATACCACCATCCAACCA 59.084 45.455 0.00 0.00 0.00 3.67
5886 6902 3.644966 TGAGAATACCACCATCCAACC 57.355 47.619 0.00 0.00 0.00 3.77
5887 6903 3.694566 GGTTGAGAATACCACCATCCAAC 59.305 47.826 0.00 0.00 35.67 3.77
5888 6904 3.621214 CGGTTGAGAATACCACCATCCAA 60.621 47.826 0.00 0.00 35.31 3.53
5889 6905 2.093181 CGGTTGAGAATACCACCATCCA 60.093 50.000 0.00 0.00 35.31 3.41
5890 6906 2.561569 CGGTTGAGAATACCACCATCC 58.438 52.381 0.00 0.00 35.31 3.51
5891 6907 1.940613 GCGGTTGAGAATACCACCATC 59.059 52.381 0.00 0.00 35.31 3.51
5892 6908 1.280710 TGCGGTTGAGAATACCACCAT 59.719 47.619 0.00 0.00 35.31 3.55
5893 6909 0.687920 TGCGGTTGAGAATACCACCA 59.312 50.000 0.00 0.00 35.31 4.17
5894 6910 2.038387 ATGCGGTTGAGAATACCACC 57.962 50.000 0.00 0.00 35.31 4.61
5895 6911 5.751243 ATAAATGCGGTTGAGAATACCAC 57.249 39.130 0.00 0.00 35.31 4.16
5896 6912 6.038161 CAGAATAAATGCGGTTGAGAATACCA 59.962 38.462 0.00 0.00 35.31 3.25
5897 6913 6.430451 CAGAATAAATGCGGTTGAGAATACC 58.570 40.000 0.00 0.00 0.00 2.73
5898 6914 6.260050 TCCAGAATAAATGCGGTTGAGAATAC 59.740 38.462 0.00 0.00 0.00 1.89
5899 6915 6.353323 TCCAGAATAAATGCGGTTGAGAATA 58.647 36.000 0.00 0.00 0.00 1.75
5900 6916 5.192927 TCCAGAATAAATGCGGTTGAGAAT 58.807 37.500 0.00 0.00 0.00 2.40
5901 6917 4.584874 TCCAGAATAAATGCGGTTGAGAA 58.415 39.130 0.00 0.00 0.00 2.87
5902 6918 4.214986 TCCAGAATAAATGCGGTTGAGA 57.785 40.909 0.00 0.00 0.00 3.27
5903 6919 5.505173 AATCCAGAATAAATGCGGTTGAG 57.495 39.130 0.00 0.00 0.00 3.02
5904 6920 5.913137 AAATCCAGAATAAATGCGGTTGA 57.087 34.783 0.00 0.00 0.00 3.18
5905 6921 8.647143 AAATAAATCCAGAATAAATGCGGTTG 57.353 30.769 0.00 0.00 0.00 3.77
5906 6922 8.474025 TGAAATAAATCCAGAATAAATGCGGTT 58.526 29.630 0.00 0.00 0.00 4.44
5907 6923 8.006298 TGAAATAAATCCAGAATAAATGCGGT 57.994 30.769 0.00 0.00 0.00 5.68
5908 6924 7.596248 CCTGAAATAAATCCAGAATAAATGCGG 59.404 37.037 0.00 0.00 0.00 5.69
5909 6925 8.352201 TCCTGAAATAAATCCAGAATAAATGCG 58.648 33.333 0.00 0.00 0.00 4.73
5916 6932 8.416329 CCGAAAATCCTGAAATAAATCCAGAAT 58.584 33.333 0.00 0.00 0.00 2.40
5917 6933 7.630513 GCCGAAAATCCTGAAATAAATCCAGAA 60.631 37.037 0.00 0.00 0.00 3.02
5918 6934 6.183360 GCCGAAAATCCTGAAATAAATCCAGA 60.183 38.462 0.00 0.00 0.00 3.86
5919 6935 5.979517 GCCGAAAATCCTGAAATAAATCCAG 59.020 40.000 0.00 0.00 0.00 3.86
5920 6936 5.420421 TGCCGAAAATCCTGAAATAAATCCA 59.580 36.000 0.00 0.00 0.00 3.41
5921 6937 5.901552 TGCCGAAAATCCTGAAATAAATCC 58.098 37.500 0.00 0.00 0.00 3.01
5922 6938 9.696917 ATATTGCCGAAAATCCTGAAATAAATC 57.303 29.630 0.00 0.00 0.00 2.17
5923 6939 9.696917 GATATTGCCGAAAATCCTGAAATAAAT 57.303 29.630 0.00 0.00 0.00 1.40
5924 6940 7.860373 CGATATTGCCGAAAATCCTGAAATAAA 59.140 33.333 0.00 0.00 0.00 1.40
5925 6941 7.012894 ACGATATTGCCGAAAATCCTGAAATAA 59.987 33.333 0.00 0.00 0.00 1.40
5926 6942 6.485313 ACGATATTGCCGAAAATCCTGAAATA 59.515 34.615 0.00 0.00 0.00 1.40
5927 6943 5.299279 ACGATATTGCCGAAAATCCTGAAAT 59.701 36.000 0.00 0.00 0.00 2.17
5928 6944 4.638421 ACGATATTGCCGAAAATCCTGAAA 59.362 37.500 0.00 0.00 0.00 2.69
5929 6945 4.196193 ACGATATTGCCGAAAATCCTGAA 58.804 39.130 0.00 0.00 0.00 3.02
5930 6946 3.804036 ACGATATTGCCGAAAATCCTGA 58.196 40.909 0.00 0.00 0.00 3.86
5931 6947 4.273480 AGAACGATATTGCCGAAAATCCTG 59.727 41.667 0.00 0.00 0.00 3.86
5932 6948 4.451900 AGAACGATATTGCCGAAAATCCT 58.548 39.130 0.00 0.00 0.00 3.24
5933 6949 4.813296 AGAACGATATTGCCGAAAATCC 57.187 40.909 0.00 0.00 0.00 3.01
5934 6950 6.363473 CCTAAGAACGATATTGCCGAAAATC 58.637 40.000 0.00 0.00 0.00 2.17
5935 6951 5.238650 CCCTAAGAACGATATTGCCGAAAAT 59.761 40.000 0.00 0.00 0.00 1.82
5936 6952 4.573201 CCCTAAGAACGATATTGCCGAAAA 59.427 41.667 0.00 0.00 0.00 2.29
5937 6953 4.124238 CCCTAAGAACGATATTGCCGAAA 58.876 43.478 0.00 0.00 0.00 3.46
5938 6954 3.493699 CCCCTAAGAACGATATTGCCGAA 60.494 47.826 0.00 0.00 0.00 4.30
5939 6955 2.036733 CCCCTAAGAACGATATTGCCGA 59.963 50.000 0.00 0.00 0.00 5.54
5940 6956 2.224209 ACCCCTAAGAACGATATTGCCG 60.224 50.000 0.00 0.00 0.00 5.69
5941 6957 3.487120 ACCCCTAAGAACGATATTGCC 57.513 47.619 0.00 0.00 0.00 4.52
5942 6958 4.562963 CCCTACCCCTAAGAACGATATTGC 60.563 50.000 0.00 0.00 0.00 3.56
5943 6959 4.591924 ACCCTACCCCTAAGAACGATATTG 59.408 45.833 0.00 0.00 0.00 1.90
5944 6960 4.591924 CACCCTACCCCTAAGAACGATATT 59.408 45.833 0.00 0.00 0.00 1.28
5945 6961 4.158015 CACCCTACCCCTAAGAACGATAT 58.842 47.826 0.00 0.00 0.00 1.63
5946 6962 3.052642 ACACCCTACCCCTAAGAACGATA 60.053 47.826 0.00 0.00 0.00 2.92
5947 6963 2.292719 ACACCCTACCCCTAAGAACGAT 60.293 50.000 0.00 0.00 0.00 3.73
5948 6964 1.077663 ACACCCTACCCCTAAGAACGA 59.922 52.381 0.00 0.00 0.00 3.85
5949 6965 1.206371 CACACCCTACCCCTAAGAACG 59.794 57.143 0.00 0.00 0.00 3.95
5950 6966 2.027469 CACACACCCTACCCCTAAGAAC 60.027 54.545 0.00 0.00 0.00 3.01
5951 6967 2.262637 CACACACCCTACCCCTAAGAA 58.737 52.381 0.00 0.00 0.00 2.52
5952 6968 1.150560 ACACACACCCTACCCCTAAGA 59.849 52.381 0.00 0.00 0.00 2.10
5953 6969 1.278127 CACACACACCCTACCCCTAAG 59.722 57.143 0.00 0.00 0.00 2.18
5954 6970 1.354101 CACACACACCCTACCCCTAA 58.646 55.000 0.00 0.00 0.00 2.69
5955 6971 1.196104 GCACACACACCCTACCCCTA 61.196 60.000 0.00 0.00 0.00 3.53
5956 6972 2.526046 GCACACACACCCTACCCCT 61.526 63.158 0.00 0.00 0.00 4.79
5957 6973 2.033602 GCACACACACCCTACCCC 59.966 66.667 0.00 0.00 0.00 4.95
5958 6974 2.358247 CGCACACACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
5959 6975 3.047877 GCGCACACACACCCTACC 61.048 66.667 0.30 0.00 0.00 3.18
5960 6976 3.411351 CGCGCACACACACCCTAC 61.411 66.667 8.75 0.00 0.00 3.18
5975 6991 4.760047 ACTGACCCCATGACGCGC 62.760 66.667 5.73 0.00 0.00 6.86
5976 6992 2.220615 TACACTGACCCCATGACGCG 62.221 60.000 3.53 3.53 0.00 6.01
5977 6993 0.178068 ATACACTGACCCCATGACGC 59.822 55.000 0.00 0.00 0.00 5.19
5978 6994 1.207089 ACATACACTGACCCCATGACG 59.793 52.381 0.00 0.00 0.00 4.35
5979 6995 2.632377 CACATACACTGACCCCATGAC 58.368 52.381 0.00 0.00 0.00 3.06
5980 6996 1.065491 GCACATACACTGACCCCATGA 60.065 52.381 0.00 0.00 0.00 3.07
5981 6997 1.382522 GCACATACACTGACCCCATG 58.617 55.000 0.00 0.00 0.00 3.66
5982 6998 0.107703 CGCACATACACTGACCCCAT 60.108 55.000 0.00 0.00 0.00 4.00
5983 6999 1.295101 CGCACATACACTGACCCCA 59.705 57.895 0.00 0.00 0.00 4.96
5984 7000 0.533491 TACGCACATACACTGACCCC 59.467 55.000 0.00 0.00 0.00 4.95
5985 7001 2.596904 ATACGCACATACACTGACCC 57.403 50.000 0.00 0.00 0.00 4.46
5986 7002 8.403236 TCATATATATACGCACATACACTGACC 58.597 37.037 0.00 0.00 0.00 4.02
5987 7003 9.439537 CTCATATATATACGCACATACACTGAC 57.560 37.037 0.00 0.00 0.00 3.51
5988 7004 9.174166 ACTCATATATATACGCACATACACTGA 57.826 33.333 0.00 0.00 0.00 3.41
5989 7005 9.226345 CACTCATATATATACGCACATACACTG 57.774 37.037 0.00 0.00 0.00 3.66
5990 7006 7.915923 GCACTCATATATATACGCACATACACT 59.084 37.037 0.00 0.00 0.00 3.55
5991 7007 7.915923 AGCACTCATATATATACGCACATACAC 59.084 37.037 0.00 0.00 0.00 2.90
5992 7008 7.996385 AGCACTCATATATATACGCACATACA 58.004 34.615 0.00 0.00 0.00 2.29
5993 7009 8.746751 CAAGCACTCATATATATACGCACATAC 58.253 37.037 0.00 0.00 0.00 2.39
5994 7010 8.466798 ACAAGCACTCATATATATACGCACATA 58.533 33.333 0.00 0.00 0.00 2.29
5995 7011 7.276438 CACAAGCACTCATATATATACGCACAT 59.724 37.037 0.00 0.00 0.00 3.21
5996 7012 6.586082 CACAAGCACTCATATATATACGCACA 59.414 38.462 0.00 0.00 0.00 4.57
5997 7013 6.586463 ACACAAGCACTCATATATATACGCAC 59.414 38.462 0.00 0.00 0.00 5.34
5998 7014 6.687604 ACACAAGCACTCATATATATACGCA 58.312 36.000 0.00 0.00 0.00 5.24
5999 7015 7.582435 AACACAAGCACTCATATATATACGC 57.418 36.000 0.00 0.00 0.00 4.42
6000 7016 8.978539 ACAAACACAAGCACTCATATATATACG 58.021 33.333 0.00 0.00 0.00 3.06
6004 7020 9.313118 CAGTACAAACACAAGCACTCATATATA 57.687 33.333 0.00 0.00 0.00 0.86
6005 7021 8.040727 TCAGTACAAACACAAGCACTCATATAT 58.959 33.333 0.00 0.00 0.00 0.86
6006 7022 7.382898 TCAGTACAAACACAAGCACTCATATA 58.617 34.615 0.00 0.00 0.00 0.86
6007 7023 6.230472 TCAGTACAAACACAAGCACTCATAT 58.770 36.000 0.00 0.00 0.00 1.78
6008 7024 5.606505 TCAGTACAAACACAAGCACTCATA 58.393 37.500 0.00 0.00 0.00 2.15
6009 7025 4.450976 TCAGTACAAACACAAGCACTCAT 58.549 39.130 0.00 0.00 0.00 2.90
6010 7026 3.867857 TCAGTACAAACACAAGCACTCA 58.132 40.909 0.00 0.00 0.00 3.41
6011 7027 6.727824 ATATCAGTACAAACACAAGCACTC 57.272 37.500 0.00 0.00 0.00 3.51
6012 7028 8.615878 TTTATATCAGTACAAACACAAGCACT 57.384 30.769 0.00 0.00 0.00 4.40
6013 7029 9.672086 TTTTTATATCAGTACAAACACAAGCAC 57.328 29.630 0.00 0.00 0.00 4.40
6038 7054 3.742433 TGTGGTCCGCATTGAATTTTT 57.258 38.095 0.00 0.00 0.00 1.94
6039 7055 3.959535 ATGTGGTCCGCATTGAATTTT 57.040 38.095 12.37 0.00 29.65 1.82
6040 7056 3.761218 TGTATGTGGTCCGCATTGAATTT 59.239 39.130 22.69 0.35 36.02 1.82
6041 7057 3.351740 TGTATGTGGTCCGCATTGAATT 58.648 40.909 22.69 1.11 36.02 2.17
6042 7058 2.945008 CTGTATGTGGTCCGCATTGAAT 59.055 45.455 22.69 1.87 36.02 2.57
6043 7059 2.027653 TCTGTATGTGGTCCGCATTGAA 60.028 45.455 22.69 8.41 36.02 2.69
6044 7060 1.552792 TCTGTATGTGGTCCGCATTGA 59.447 47.619 22.69 15.09 36.02 2.57
6045 7061 1.935873 CTCTGTATGTGGTCCGCATTG 59.064 52.381 22.69 13.25 36.02 2.82
6046 7062 1.555075 ACTCTGTATGTGGTCCGCATT 59.445 47.619 22.69 7.76 36.02 3.56
6047 7063 1.195115 ACTCTGTATGTGGTCCGCAT 58.805 50.000 21.35 21.35 38.23 4.73
6048 7064 1.842052 TACTCTGTATGTGGTCCGCA 58.158 50.000 7.77 7.77 0.00 5.69
6049 7065 2.953466 TTACTCTGTATGTGGTCCGC 57.047 50.000 0.00 0.00 0.00 5.54
6050 7066 5.416083 TCATTTTACTCTGTATGTGGTCCG 58.584 41.667 0.00 0.00 0.00 4.79
6051 7067 6.313905 CACTCATTTTACTCTGTATGTGGTCC 59.686 42.308 0.00 0.00 0.00 4.46
6052 7068 7.097192 TCACTCATTTTACTCTGTATGTGGTC 58.903 38.462 0.00 0.00 0.00 4.02
6053 7069 7.004555 TCACTCATTTTACTCTGTATGTGGT 57.995 36.000 0.00 0.00 0.00 4.16
6054 7070 7.905604 TTCACTCATTTTACTCTGTATGTGG 57.094 36.000 0.00 0.00 0.00 4.17
6055 7071 9.376075 AGATTCACTCATTTTACTCTGTATGTG 57.624 33.333 0.00 0.00 0.00 3.21
6056 7072 9.593134 GAGATTCACTCATTTTACTCTGTATGT 57.407 33.333 0.00 0.00 44.36 2.29
6057 7073 9.039870 GGAGATTCACTCATTTTACTCTGTATG 57.960 37.037 0.00 0.00 46.54 2.39
6058 7074 8.762645 TGGAGATTCACTCATTTTACTCTGTAT 58.237 33.333 0.00 0.00 46.54 2.29
6059 7075 8.035394 GTGGAGATTCACTCATTTTACTCTGTA 58.965 37.037 0.00 0.00 46.54 2.74
6060 7076 6.876257 GTGGAGATTCACTCATTTTACTCTGT 59.124 38.462 0.00 0.00 46.54 3.41
6061 7077 7.102346 AGTGGAGATTCACTCATTTTACTCTG 58.898 38.462 0.00 0.00 43.82 3.35
6062 7078 7.251321 AGTGGAGATTCACTCATTTTACTCT 57.749 36.000 0.00 0.00 43.82 3.24
6063 7079 9.436957 TTTAGTGGAGATTCACTCATTTTACTC 57.563 33.333 0.00 0.00 43.82 2.59
6064 7080 9.793259 TTTTAGTGGAGATTCACTCATTTTACT 57.207 29.630 0.00 0.00 43.82 2.24
6138 7154 9.574577 TCCCTCCATTCCTAAATATATATGTGT 57.425 33.333 0.00 0.00 0.00 3.72
6140 7156 9.805204 ACTCCCTCCATTCCTAAATATATATGT 57.195 33.333 0.00 0.00 0.00 2.29
6150 7166 9.953429 CCTAATATATACTCCCTCCATTCCTAA 57.047 37.037 0.00 0.00 0.00 2.69
6151 7167 8.011290 GCCTAATATATACTCCCTCCATTCCTA 58.989 40.741 0.00 0.00 0.00 2.94
6152 7168 6.847036 GCCTAATATATACTCCCTCCATTCCT 59.153 42.308 0.00 0.00 0.00 3.36
6153 7169 6.847036 AGCCTAATATATACTCCCTCCATTCC 59.153 42.308 0.00 0.00 0.00 3.01
6154 7170 7.688083 GCAGCCTAATATATACTCCCTCCATTC 60.688 44.444 0.00 0.00 0.00 2.67
6155 7171 6.100424 GCAGCCTAATATATACTCCCTCCATT 59.900 42.308 0.00 0.00 0.00 3.16
6156 7172 5.604650 GCAGCCTAATATATACTCCCTCCAT 59.395 44.000 0.00 0.00 0.00 3.41
6157 7173 4.962995 GCAGCCTAATATATACTCCCTCCA 59.037 45.833 0.00 0.00 0.00 3.86
6158 7174 5.212745 AGCAGCCTAATATATACTCCCTCC 58.787 45.833 0.00 0.00 0.00 4.30
6159 7175 6.155393 ACAAGCAGCCTAATATATACTCCCTC 59.845 42.308 0.00 0.00 0.00 4.30
6160 7176 6.026186 ACAAGCAGCCTAATATATACTCCCT 58.974 40.000 0.00 0.00 0.00 4.20
6161 7177 6.301169 ACAAGCAGCCTAATATATACTCCC 57.699 41.667 0.00 0.00 0.00 4.30
6162 7178 6.155393 AGGACAAGCAGCCTAATATATACTCC 59.845 42.308 0.00 0.00 31.31 3.85
6163 7179 7.123547 AGAGGACAAGCAGCCTAATATATACTC 59.876 40.741 0.00 0.00 33.84 2.59
6164 7180 6.957020 AGAGGACAAGCAGCCTAATATATACT 59.043 38.462 0.00 0.00 33.84 2.12
6165 7181 7.176589 AGAGGACAAGCAGCCTAATATATAC 57.823 40.000 0.00 0.00 33.84 1.47
6166 7182 9.494055 AATAGAGGACAAGCAGCCTAATATATA 57.506 33.333 0.00 0.00 33.84 0.86
6167 7183 7.986553 ATAGAGGACAAGCAGCCTAATATAT 57.013 36.000 0.00 0.00 33.84 0.86
6168 7184 7.798710 AATAGAGGACAAGCAGCCTAATATA 57.201 36.000 0.00 0.00 33.84 0.86
6169 7185 6.694445 AATAGAGGACAAGCAGCCTAATAT 57.306 37.500 0.00 0.00 33.84 1.28
6170 7186 6.099701 TCAAATAGAGGACAAGCAGCCTAATA 59.900 38.462 0.00 0.00 33.84 0.98
6171 7187 5.104360 TCAAATAGAGGACAAGCAGCCTAAT 60.104 40.000 0.00 0.00 33.84 1.73
6172 7188 4.225042 TCAAATAGAGGACAAGCAGCCTAA 59.775 41.667 0.00 0.00 33.84 2.69
6173 7189 3.774766 TCAAATAGAGGACAAGCAGCCTA 59.225 43.478 0.00 0.00 33.84 3.93
6174 7190 2.573462 TCAAATAGAGGACAAGCAGCCT 59.427 45.455 0.00 0.00 37.18 4.58
6175 7191 2.941720 CTCAAATAGAGGACAAGCAGCC 59.058 50.000 0.00 0.00 40.84 4.85
6186 7202 4.367386 CAAAGGCTTGCCTCAAATAGAG 57.633 45.455 15.10 0.00 44.31 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.