Multiple sequence alignment - TraesCS7D01G375000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G375000 chr7D 100.000 3917 0 0 1 3917 485105323 485101407 0.000000e+00 7234.0
1 TraesCS7D01G375000 chr7B 96.115 2703 91 7 449 3143 512760181 512757485 0.000000e+00 4397.0
2 TraesCS7D01G375000 chr7B 93.671 158 10 0 1 158 512760845 512760688 1.820000e-58 237.0
3 TraesCS7D01G375000 chr7B 80.058 346 25 19 3194 3513 512757475 512757148 2.370000e-52 217.0
4 TraesCS7D01G375000 chr7B 85.333 75 8 3 3845 3917 437670538 437670465 1.510000e-09 75.0
5 TraesCS7D01G375000 chr7A 94.473 2696 134 10 457 3143 553390590 553387901 0.000000e+00 4139.0
6 TraesCS7D01G375000 chr7A 83.003 353 31 11 3182 3521 553387903 553387567 3.830000e-75 292.0
7 TraesCS7D01G375000 chr7A 96.063 127 4 1 1 127 553391527 553391402 5.130000e-49 206.0
8 TraesCS7D01G375000 chr7A 90.909 132 8 3 157 285 553390729 553390599 1.450000e-39 174.0
9 TraesCS7D01G375000 chr4B 92.169 166 9 3 281 442 178081099 178081264 8.460000e-57 231.0
10 TraesCS7D01G375000 chr4B 86.667 135 12 1 3519 3653 424274396 424274524 1.130000e-30 145.0
11 TraesCS7D01G375000 chr2A 90.909 176 9 6 278 447 578387548 578387722 3.040000e-56 230.0
12 TraesCS7D01G375000 chr2A 90.588 170 13 2 279 446 7920886 7921054 5.090000e-54 222.0
13 TraesCS7D01G375000 chr2A 92.727 110 5 2 3530 3637 82338450 82338558 5.240000e-34 156.0
14 TraesCS7D01G375000 chr1B 90.395 177 11 5 277 449 533863232 533863058 1.090000e-55 228.0
15 TraesCS7D01G375000 chr5A 91.566 166 10 1 281 442 322584008 322584173 3.940000e-55 226.0
16 TraesCS7D01G375000 chr5A 92.437 119 8 1 3519 3637 624724207 624724324 6.730000e-38 169.0
17 TraesCS7D01G375000 chr1A 91.975 162 11 1 283 442 249049877 249050038 3.940000e-55 226.0
18 TraesCS7D01G375000 chr1A 90.076 131 9 4 3511 3637 17975338 17975208 2.420000e-37 167.0
19 TraesCS7D01G375000 chr2B 90.286 175 10 4 274 442 578597692 578597865 5.090000e-54 222.0
20 TraesCS7D01G375000 chr2B 93.220 118 8 0 3520 3637 777495025 777494908 1.450000e-39 174.0
21 TraesCS7D01G375000 chr2B 90.551 127 11 1 3520 3645 534232740 534232614 2.420000e-37 167.0
22 TraesCS7D01G375000 chr2D 90.476 168 9 6 284 446 362930808 362930973 8.520000e-52 215.0
23 TraesCS7D01G375000 chr2D 90.769 65 5 1 3853 3917 73856797 73856860 6.970000e-13 86.1
24 TraesCS7D01G375000 chr4D 87.701 187 16 6 277 458 421405119 421404935 1.100000e-50 211.0
25 TraesCS7D01G375000 chr1D 91.736 121 5 2 3517 3637 275135691 275135806 3.130000e-36 163.0
26 TraesCS7D01G375000 chr6D 92.174 115 8 1 3520 3634 77237047 77237160 1.130000e-35 161.0
27 TraesCS7D01G375000 chr3D 89.831 118 6 1 3520 3637 394956404 394956515 3.150000e-31 147.0
28 TraesCS7D01G375000 chr6A 87.692 65 6 2 3853 3917 38757174 38757236 1.510000e-09 75.0
29 TraesCS7D01G375000 chr4A 96.970 33 1 0 3850 3882 558226348 558226380 5.470000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G375000 chr7D 485101407 485105323 3916 True 7234.00 7234 100.000 1 3917 1 chr7D.!!$R1 3916
1 TraesCS7D01G375000 chr7B 512757148 512760845 3697 True 1617.00 4397 89.948 1 3513 3 chr7B.!!$R2 3512
2 TraesCS7D01G375000 chr7A 553387567 553391527 3960 True 1202.75 4139 91.112 1 3521 4 chr7A.!!$R1 3520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
767 1413 0.109412 GCAGCTGTGATTCACTTGGC 60.109 55.0 16.64 16.68 35.11 4.52 F
1141 1788 0.392461 TGGGCAAGCTCACGGTTATC 60.392 55.0 0.00 0.00 0.00 1.75 F
1654 2301 0.687354 GAGTCAGGGTCCAGCTTCAA 59.313 55.0 0.00 0.00 0.00 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1995 2642 1.039785 GGCCAGATTTCCCTCTTGCC 61.040 60.000 0.00 1.03 44.12 4.52 R
2595 3242 1.344438 TGGATACGGTCATCATCCAGC 59.656 52.381 6.31 0.00 42.55 4.85 R
3469 4150 0.694771 ACATTCAGCCTCTGCCTTGA 59.305 50.000 0.00 0.00 38.69 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 4.280436 TCTCGCCTTTTTCCAGTCATTA 57.720 40.909 0.00 0.00 0.00 1.90
55 56 4.000988 TCTCGCCTTTTTCCAGTCATTAC 58.999 43.478 0.00 0.00 0.00 1.89
120 121 3.204606 AGCAGTGACTACTCCCCATACTA 59.795 47.826 0.00 0.00 34.07 1.82
123 124 2.892215 GTGACTACTCCCCATACTAGGC 59.108 54.545 0.00 0.00 0.00 3.93
148 149 9.934190 GCAAATTGATTTGTGTTTTTCTATTGT 57.066 25.926 15.57 0.00 46.63 2.71
227 872 5.611796 TCACTTTGGTCGATGAAAATCAG 57.388 39.130 0.00 0.00 0.00 2.90
292 938 8.937207 TTCTCTATGTACTTAATACTCCCTCC 57.063 38.462 0.00 0.00 34.56 4.30
293 939 7.166851 TCTCTATGTACTTAATACTCCCTCCG 58.833 42.308 0.00 0.00 34.56 4.63
294 940 6.845908 TCTATGTACTTAATACTCCCTCCGT 58.154 40.000 0.00 0.00 34.56 4.69
295 941 7.293073 TCTATGTACTTAATACTCCCTCCGTT 58.707 38.462 0.00 0.00 34.56 4.44
296 942 5.587388 TGTACTTAATACTCCCTCCGTTG 57.413 43.478 0.00 0.00 34.56 4.10
297 943 3.538634 ACTTAATACTCCCTCCGTTGC 57.461 47.619 0.00 0.00 0.00 4.17
298 944 3.105283 ACTTAATACTCCCTCCGTTGCT 58.895 45.455 0.00 0.00 0.00 3.91
299 945 4.284178 ACTTAATACTCCCTCCGTTGCTA 58.716 43.478 0.00 0.00 0.00 3.49
300 946 4.713321 ACTTAATACTCCCTCCGTTGCTAA 59.287 41.667 0.00 0.00 0.00 3.09
301 947 5.188359 ACTTAATACTCCCTCCGTTGCTAAA 59.812 40.000 0.00 0.00 0.00 1.85
302 948 4.772886 AATACTCCCTCCGTTGCTAAAT 57.227 40.909 0.00 0.00 0.00 1.40
303 949 5.881923 AATACTCCCTCCGTTGCTAAATA 57.118 39.130 0.00 0.00 0.00 1.40
304 950 6.435292 AATACTCCCTCCGTTGCTAAATAT 57.565 37.500 0.00 0.00 0.00 1.28
305 951 7.549147 AATACTCCCTCCGTTGCTAAATATA 57.451 36.000 0.00 0.00 0.00 0.86
306 952 5.881923 ACTCCCTCCGTTGCTAAATATAA 57.118 39.130 0.00 0.00 0.00 0.98
307 953 5.855045 ACTCCCTCCGTTGCTAAATATAAG 58.145 41.667 0.00 0.00 0.00 1.73
308 954 5.365895 ACTCCCTCCGTTGCTAAATATAAGT 59.634 40.000 0.00 0.00 0.00 2.24
309 955 5.850614 TCCCTCCGTTGCTAAATATAAGTC 58.149 41.667 0.00 0.00 0.00 3.01
310 956 5.601313 TCCCTCCGTTGCTAAATATAAGTCT 59.399 40.000 0.00 0.00 0.00 3.24
311 957 6.099269 TCCCTCCGTTGCTAAATATAAGTCTT 59.901 38.462 0.00 0.00 0.00 3.01
312 958 6.766467 CCCTCCGTTGCTAAATATAAGTCTTT 59.234 38.462 0.00 0.00 0.00 2.52
313 959 7.282450 CCCTCCGTTGCTAAATATAAGTCTTTT 59.718 37.037 0.00 0.00 0.00 2.27
314 960 8.674607 CCTCCGTTGCTAAATATAAGTCTTTTT 58.325 33.333 0.00 0.00 0.00 1.94
331 977 7.851387 GTCTTTTTAGAGACTCCAATAAGGG 57.149 40.000 11.69 0.00 42.18 3.95
332 978 7.621796 GTCTTTTTAGAGACTCCAATAAGGGA 58.378 38.462 11.69 0.00 42.18 4.20
333 979 7.549842 GTCTTTTTAGAGACTCCAATAAGGGAC 59.450 40.741 11.69 3.63 42.18 4.46
335 981 8.674925 TTTTTAGAGACTCCAATAAGGGACTA 57.325 34.615 0.00 0.00 38.49 2.59
336 982 7.657023 TTTAGAGACTCCAATAAGGGACTAC 57.343 40.000 0.00 0.00 38.49 2.73
337 983 5.208294 AGAGACTCCAATAAGGGACTACA 57.792 43.478 0.00 0.00 38.49 2.74
338 984 5.782925 AGAGACTCCAATAAGGGACTACAT 58.217 41.667 0.00 0.00 38.49 2.29
339 985 6.923670 AGAGACTCCAATAAGGGACTACATA 58.076 40.000 0.00 0.00 38.49 2.29
340 986 6.778559 AGAGACTCCAATAAGGGACTACATAC 59.221 42.308 0.00 0.00 38.49 2.39
341 987 5.535406 AGACTCCAATAAGGGACTACATACG 59.465 44.000 0.00 0.00 38.49 3.06
342 988 4.587684 ACTCCAATAAGGGACTACATACGG 59.412 45.833 0.00 0.00 38.49 4.02
343 989 4.806892 TCCAATAAGGGACTACATACGGA 58.193 43.478 0.00 0.00 38.49 4.69
344 990 4.831155 TCCAATAAGGGACTACATACGGAG 59.169 45.833 0.00 0.00 38.49 4.63
345 991 4.557205 CAATAAGGGACTACATACGGAGC 58.443 47.826 0.00 0.00 38.49 4.70
346 992 2.154567 AAGGGACTACATACGGAGCA 57.845 50.000 0.00 0.00 38.49 4.26
347 993 2.154567 AGGGACTACATACGGAGCAA 57.845 50.000 0.00 0.00 36.02 3.91
348 994 2.463752 AGGGACTACATACGGAGCAAA 58.536 47.619 0.00 0.00 36.02 3.68
349 995 2.835764 AGGGACTACATACGGAGCAAAA 59.164 45.455 0.00 0.00 36.02 2.44
350 996 3.454812 AGGGACTACATACGGAGCAAAAT 59.545 43.478 0.00 0.00 36.02 1.82
351 997 3.560068 GGGACTACATACGGAGCAAAATG 59.440 47.826 0.00 0.00 0.00 2.32
352 998 4.439057 GGACTACATACGGAGCAAAATGA 58.561 43.478 0.00 0.00 0.00 2.57
353 999 4.873827 GGACTACATACGGAGCAAAATGAA 59.126 41.667 0.00 0.00 0.00 2.57
354 1000 5.527582 GGACTACATACGGAGCAAAATGAAT 59.472 40.000 0.00 0.00 0.00 2.57
355 1001 6.363577 ACTACATACGGAGCAAAATGAATG 57.636 37.500 0.00 0.00 0.00 2.67
356 1002 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
357 1003 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
358 1004 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
359 1005 7.566760 ACATACGGAGCAAAATGAATGAATA 57.433 32.000 0.00 0.00 0.00 1.75
360 1006 8.169977 ACATACGGAGCAAAATGAATGAATAT 57.830 30.769 0.00 0.00 0.00 1.28
361 1007 9.283768 ACATACGGAGCAAAATGAATGAATATA 57.716 29.630 0.00 0.00 0.00 0.86
362 1008 9.546909 CATACGGAGCAAAATGAATGAATATAC 57.453 33.333 0.00 0.00 0.00 1.47
363 1009 7.566760 ACGGAGCAAAATGAATGAATATACA 57.433 32.000 0.00 0.00 0.00 2.29
364 1010 7.417612 ACGGAGCAAAATGAATGAATATACAC 58.582 34.615 0.00 0.00 0.00 2.90
365 1011 7.283127 ACGGAGCAAAATGAATGAATATACACT 59.717 33.333 0.00 0.00 0.00 3.55
366 1012 7.800380 CGGAGCAAAATGAATGAATATACACTC 59.200 37.037 0.00 0.00 0.00 3.51
367 1013 8.844244 GGAGCAAAATGAATGAATATACACTCT 58.156 33.333 0.00 0.00 0.00 3.24
408 1054 8.780846 ACATCCGTATGTAGTTTGTATTGAAA 57.219 30.769 0.00 0.00 44.66 2.69
409 1055 9.391006 ACATCCGTATGTAGTTTGTATTGAAAT 57.609 29.630 0.00 0.00 44.66 2.17
410 1056 9.864034 CATCCGTATGTAGTTTGTATTGAAATC 57.136 33.333 0.00 0.00 0.00 2.17
411 1057 9.832445 ATCCGTATGTAGTTTGTATTGAAATCT 57.168 29.630 0.00 0.00 0.00 2.40
412 1058 9.309516 TCCGTATGTAGTTTGTATTGAAATCTC 57.690 33.333 0.00 0.00 0.00 2.75
413 1059 9.314321 CCGTATGTAGTTTGTATTGAAATCTCT 57.686 33.333 0.00 0.00 0.00 3.10
435 1081 9.712305 TCTCTAAAAAGACATTTAGAACTGGAG 57.288 33.333 9.88 0.00 46.04 3.86
436 1082 8.848474 TCTAAAAAGACATTTAGAACTGGAGG 57.152 34.615 6.96 0.00 44.66 4.30
437 1083 6.901081 AAAAAGACATTTAGAACTGGAGGG 57.099 37.500 0.00 0.00 0.00 4.30
438 1084 5.843019 AAAGACATTTAGAACTGGAGGGA 57.157 39.130 0.00 0.00 0.00 4.20
439 1085 5.428184 AAGACATTTAGAACTGGAGGGAG 57.572 43.478 0.00 0.00 0.00 4.30
440 1086 4.430441 AGACATTTAGAACTGGAGGGAGT 58.570 43.478 0.00 0.00 0.00 3.85
441 1087 5.590818 AGACATTTAGAACTGGAGGGAGTA 58.409 41.667 0.00 0.00 0.00 2.59
442 1088 6.023603 AGACATTTAGAACTGGAGGGAGTAA 58.976 40.000 0.00 0.00 0.00 2.24
443 1089 6.674419 AGACATTTAGAACTGGAGGGAGTAAT 59.326 38.462 0.00 0.00 0.00 1.89
444 1090 7.182930 AGACATTTAGAACTGGAGGGAGTAATT 59.817 37.037 0.00 0.00 0.00 1.40
445 1091 7.112779 ACATTTAGAACTGGAGGGAGTAATTG 58.887 38.462 0.00 0.00 0.00 2.32
446 1092 6.945636 TTTAGAACTGGAGGGAGTAATTGA 57.054 37.500 0.00 0.00 0.00 2.57
447 1093 6.945636 TTAGAACTGGAGGGAGTAATTGAA 57.054 37.500 0.00 0.00 0.00 2.69
448 1094 5.843019 AGAACTGGAGGGAGTAATTGAAA 57.157 39.130 0.00 0.00 0.00 2.69
449 1095 6.394345 AGAACTGGAGGGAGTAATTGAAAT 57.606 37.500 0.00 0.00 0.00 2.17
450 1096 6.183347 AGAACTGGAGGGAGTAATTGAAATG 58.817 40.000 0.00 0.00 0.00 2.32
451 1097 4.273318 ACTGGAGGGAGTAATTGAAATGC 58.727 43.478 0.00 0.00 0.00 3.56
452 1098 4.018050 ACTGGAGGGAGTAATTGAAATGCT 60.018 41.667 0.00 0.00 0.00 3.79
453 1099 4.934356 TGGAGGGAGTAATTGAAATGCTT 58.066 39.130 0.00 0.00 0.00 3.91
454 1100 4.706476 TGGAGGGAGTAATTGAAATGCTTG 59.294 41.667 0.00 0.00 0.00 4.01
455 1101 4.440663 GGAGGGAGTAATTGAAATGCTTGC 60.441 45.833 0.00 0.00 0.00 4.01
473 1119 4.101119 GCTTGCTATTCAGTAAGAGGGGTA 59.899 45.833 6.66 0.00 44.68 3.69
509 1155 9.981460 ATTCCTTAAGTTTAGACCAGATTTCAT 57.019 29.630 0.97 0.00 0.00 2.57
518 1164 5.776173 AGACCAGATTTCATAGACCTACG 57.224 43.478 0.00 0.00 0.00 3.51
523 1169 5.859114 CCAGATTTCATAGACCTACGATTCG 59.141 44.000 4.14 4.14 0.00 3.34
528 1174 5.670149 TCATAGACCTACGATTCGAGTTC 57.330 43.478 13.95 4.29 0.00 3.01
529 1175 5.366460 TCATAGACCTACGATTCGAGTTCT 58.634 41.667 13.95 10.97 0.00 3.01
530 1176 5.466058 TCATAGACCTACGATTCGAGTTCTC 59.534 44.000 13.95 0.82 0.00 2.87
561 1207 7.655236 TTCGAAATGACATGCAATTCAAATT 57.345 28.000 14.24 4.03 36.42 1.82
579 1225 6.542821 TCAAATTGTTGTCTTGTCCCTATCT 58.457 36.000 0.00 0.00 36.07 1.98
581 1227 8.160765 TCAAATTGTTGTCTTGTCCCTATCTTA 58.839 33.333 0.00 0.00 36.07 2.10
594 1240 8.801882 TGTCCCTATCTTATAACAAAAGTTGG 57.198 34.615 0.00 0.00 34.12 3.77
617 1263 2.139323 TATGTCTCAGGTGGTAGCGT 57.861 50.000 0.00 0.00 0.00 5.07
642 1288 5.734720 ACATGATTGAACAGTACCCTACAG 58.265 41.667 0.00 0.00 0.00 2.74
653 1299 3.973425 GTACCCTACAGTACTTCCCAGA 58.027 50.000 0.00 0.00 39.64 3.86
654 1300 2.817665 ACCCTACAGTACTTCCCAGAC 58.182 52.381 0.00 0.00 0.00 3.51
655 1301 2.382649 ACCCTACAGTACTTCCCAGACT 59.617 50.000 0.00 0.00 0.00 3.24
657 1303 4.045079 ACCCTACAGTACTTCCCAGACTAA 59.955 45.833 0.00 0.00 0.00 2.24
660 1306 6.156429 CCCTACAGTACTTCCCAGACTAATTT 59.844 42.308 0.00 0.00 0.00 1.82
661 1307 7.042335 CCTACAGTACTTCCCAGACTAATTTG 58.958 42.308 0.00 0.00 0.00 2.32
662 1308 5.805728 ACAGTACTTCCCAGACTAATTTGG 58.194 41.667 0.00 0.00 0.00 3.28
663 1309 5.309806 ACAGTACTTCCCAGACTAATTTGGT 59.690 40.000 0.00 0.00 32.40 3.67
664 1310 6.499350 ACAGTACTTCCCAGACTAATTTGGTA 59.501 38.462 0.00 0.00 32.40 3.25
668 1314 9.239551 GTACTTCCCAGACTAATTTGGTAATTT 57.760 33.333 0.00 0.00 35.61 1.82
669 1315 8.721133 ACTTCCCAGACTAATTTGGTAATTTT 57.279 30.769 0.00 0.00 35.61 1.82
670 1316 9.816787 ACTTCCCAGACTAATTTGGTAATTTTA 57.183 29.630 0.00 0.00 35.61 1.52
717 1363 4.114794 TGTGCATTATGTCGACTCATGAG 58.885 43.478 21.37 21.37 0.00 2.90
733 1379 5.421056 ACTCATGAGCATTGATTGACCATTT 59.579 36.000 22.83 0.00 0.00 2.32
753 1399 1.356124 TCCTTTCCTTCTCTGCAGCT 58.644 50.000 9.47 0.00 0.00 4.24
762 1408 2.090400 TCTCTGCAGCTGTGATTCAC 57.910 50.000 16.64 9.93 34.56 3.18
767 1413 0.109412 GCAGCTGTGATTCACTTGGC 60.109 55.000 16.64 16.68 35.11 4.52
811 1457 5.489792 TCCTCTGAAGTTTAGCATTGTCT 57.510 39.130 0.00 0.00 0.00 3.41
834 1480 8.227119 GTCTCTGCTTTGAGAAGAAATAACTTC 58.773 37.037 0.00 0.00 43.68 3.01
857 1503 3.684103 CTCTACGTAGAGCACTGGAAG 57.316 52.381 33.30 12.88 42.83 3.46
909 1555 1.268352 GCGGTGGTTGCAAAGATAACA 59.732 47.619 0.00 0.00 0.00 2.41
988 1635 0.538287 GGAAGTGAGGCAAGCTTGGT 60.538 55.000 27.10 0.00 0.00 3.67
995 1642 0.403271 AGGCAAGCTTGGTCACTGAT 59.597 50.000 27.10 0.00 0.00 2.90
1005 1652 4.641989 GCTTGGTCACTGATAACAATGGAT 59.358 41.667 0.00 0.00 0.00 3.41
1014 1661 1.607225 TAACAATGGATCCCAGGCCT 58.393 50.000 9.90 0.00 36.75 5.19
1083 1730 1.752198 CAAGTTCCCTGTCGTCCCA 59.248 57.895 0.00 0.00 0.00 4.37
1099 1746 1.918293 CCAGTAGCCAGTCACCCCA 60.918 63.158 0.00 0.00 0.00 4.96
1124 1771 7.063898 CACAGACAGTAATAGTCAACTTGATGG 59.936 40.741 0.00 0.00 38.46 3.51
1141 1788 0.392461 TGGGCAAGCTCACGGTTATC 60.392 55.000 0.00 0.00 0.00 1.75
1170 1817 2.508526 CAACCAAGAGGAACCAAGAGG 58.491 52.381 0.00 0.00 38.69 3.69
1176 1823 4.464947 CAAGAGGAACCAAGAGGAAGTTT 58.535 43.478 0.00 0.00 38.69 2.66
1380 2027 5.467399 TGATTTTAAGAGAACTTCGGCGAAA 59.533 36.000 23.81 7.64 37.53 3.46
1440 2087 5.130975 ACCATGTCAATCTGCTATTACTGGA 59.869 40.000 0.00 0.00 0.00 3.86
1564 2211 1.202651 CGTCTGGTGGTCAGTTCCTTT 60.203 52.381 0.00 0.00 43.76 3.11
1565 2212 2.495084 GTCTGGTGGTCAGTTCCTTTC 58.505 52.381 0.00 0.00 43.76 2.62
1586 2233 8.743714 CCTTTCTTTCCTTAATAAGACTGCAAT 58.256 33.333 0.83 0.00 30.53 3.56
1604 2251 3.760684 GCAATGATGACTGGGTTTTCTCT 59.239 43.478 0.00 0.00 0.00 3.10
1605 2252 4.380233 GCAATGATGACTGGGTTTTCTCTG 60.380 45.833 0.00 0.00 0.00 3.35
1654 2301 0.687354 GAGTCAGGGTCCAGCTTCAA 59.313 55.000 0.00 0.00 0.00 2.69
1689 2336 2.480419 CCAACTACAAGAAAGTCCAGCG 59.520 50.000 0.00 0.00 0.00 5.18
1826 2473 2.295602 GGGGGAGAAGGTGCCGTAA 61.296 63.158 0.00 0.00 37.60 3.18
1956 2603 2.442878 TGATTACTGCATAGGCCATGGT 59.557 45.455 14.67 4.17 40.13 3.55
1995 2642 3.184683 GACGGCTGCAGAAGAGCG 61.185 66.667 20.43 1.63 37.32 5.03
2019 2666 2.044946 GGGAAATCTGGCCGCTGT 60.045 61.111 0.00 0.00 0.00 4.40
2523 3170 3.391382 CACCCAGGGTCCGACCTC 61.391 72.222 8.79 7.63 39.34 3.85
2535 3182 3.386237 GACCTCGGAGCTGGCAGT 61.386 66.667 17.16 2.59 0.00 4.40
2595 3242 1.497278 CGTTCATCACAACCCGCTG 59.503 57.895 0.00 0.00 0.00 5.18
2601 3248 2.202236 ATCACAACCCGCTGCTGGAT 62.202 55.000 17.38 1.53 0.00 3.41
2694 3341 1.973812 GAGCCACCCTGCAAACTCC 60.974 63.158 0.00 0.00 0.00 3.85
2935 3585 2.766660 GCCCAAGGCTTTCCTCCT 59.233 61.111 0.00 0.00 46.69 3.69
2943 3593 3.068881 CTTTCCTCCTGCCCGACA 58.931 61.111 0.00 0.00 0.00 4.35
3012 3663 2.237392 GTCCTATGGTGTGAAGAAGGCT 59.763 50.000 0.00 0.00 0.00 4.58
3108 3763 4.698201 AAATAAAAAGGGGTTGGGTGTG 57.302 40.909 0.00 0.00 0.00 3.82
3124 3779 6.582677 TGGGTGTGGAAGTGTTAATTAATG 57.417 37.500 0.31 0.00 0.00 1.90
3143 3798 8.918202 ATTAATGTTAGGTCTTGTGTTGAAGA 57.082 30.769 0.00 0.00 0.00 2.87
3144 3799 8.740123 TTAATGTTAGGTCTTGTGTTGAAGAA 57.260 30.769 0.00 0.00 33.73 2.52
3145 3800 6.867662 ATGTTAGGTCTTGTGTTGAAGAAG 57.132 37.500 0.00 0.00 33.73 2.85
3146 3801 5.123227 TGTTAGGTCTTGTGTTGAAGAAGG 58.877 41.667 0.00 0.00 33.73 3.46
3147 3802 3.933861 AGGTCTTGTGTTGAAGAAGGT 57.066 42.857 0.00 0.00 33.73 3.50
3148 3803 3.545703 AGGTCTTGTGTTGAAGAAGGTG 58.454 45.455 0.00 0.00 33.73 4.00
3149 3804 3.199946 AGGTCTTGTGTTGAAGAAGGTGA 59.800 43.478 0.00 0.00 33.73 4.02
3150 3805 3.312697 GGTCTTGTGTTGAAGAAGGTGAC 59.687 47.826 0.00 0.00 33.73 3.67
3151 3806 3.312697 GTCTTGTGTTGAAGAAGGTGACC 59.687 47.826 0.00 0.00 33.73 4.02
3152 3807 3.199946 TCTTGTGTTGAAGAAGGTGACCT 59.800 43.478 0.00 0.00 33.87 3.85
3162 3817 2.350863 AAGGTGACCTTCTGGATCCT 57.649 50.000 11.91 0.00 40.17 3.24
3163 3818 2.350863 AGGTGACCTTCTGGATCCTT 57.649 50.000 14.23 0.00 37.04 3.36
3164 3819 2.192263 AGGTGACCTTCTGGATCCTTC 58.808 52.381 14.23 0.66 37.04 3.46
3165 3820 2.192263 GGTGACCTTCTGGATCCTTCT 58.808 52.381 14.23 0.00 37.04 2.85
3166 3821 2.573915 GGTGACCTTCTGGATCCTTCTT 59.426 50.000 14.23 0.00 37.04 2.52
3167 3822 3.369997 GGTGACCTTCTGGATCCTTCTTC 60.370 52.174 14.23 2.77 37.04 2.87
3168 3823 3.517500 GTGACCTTCTGGATCCTTCTTCT 59.482 47.826 14.23 0.00 37.04 2.85
3169 3824 3.517100 TGACCTTCTGGATCCTTCTTCTG 59.483 47.826 14.23 0.00 37.04 3.02
3170 3825 3.517500 GACCTTCTGGATCCTTCTTCTGT 59.482 47.826 14.23 1.56 37.04 3.41
3171 3826 3.913163 ACCTTCTGGATCCTTCTTCTGTT 59.087 43.478 14.23 0.00 37.04 3.16
3172 3827 4.019771 ACCTTCTGGATCCTTCTTCTGTTC 60.020 45.833 14.23 0.00 37.04 3.18
3173 3828 4.512484 CTTCTGGATCCTTCTTCTGTTCC 58.488 47.826 14.23 0.00 0.00 3.62
3174 3829 3.520696 TCTGGATCCTTCTTCTGTTCCA 58.479 45.455 14.23 0.00 0.00 3.53
3175 3830 3.909995 TCTGGATCCTTCTTCTGTTCCAA 59.090 43.478 14.23 0.00 33.15 3.53
3176 3831 4.350816 TCTGGATCCTTCTTCTGTTCCAAA 59.649 41.667 14.23 0.00 33.15 3.28
3177 3832 5.060427 TGGATCCTTCTTCTGTTCCAAAA 57.940 39.130 14.23 0.00 30.62 2.44
3178 3833 5.454062 TGGATCCTTCTTCTGTTCCAAAAA 58.546 37.500 14.23 0.00 30.62 1.94
3206 3861 3.293337 TGTGTGTGTAGTACAGTGGTCT 58.707 45.455 2.39 0.00 40.69 3.85
3207 3862 3.067601 TGTGTGTGTAGTACAGTGGTCTG 59.932 47.826 2.39 0.00 46.18 3.51
3226 3881 5.874810 GGTCTGTTACAGTTATGCATGAAGA 59.125 40.000 10.16 0.00 32.61 2.87
3235 3890 8.565896 ACAGTTATGCATGAAGAAATTAGTCA 57.434 30.769 10.16 0.00 0.00 3.41
3259 3914 1.630878 GTGAGGTTCCTCCCATCAGTT 59.369 52.381 15.20 0.00 36.75 3.16
3261 3916 0.995024 AGGTTCCTCCCATCAGTTGG 59.005 55.000 0.00 0.00 46.00 3.77
3262 3917 0.698818 GGTTCCTCCCATCAGTTGGT 59.301 55.000 0.00 0.00 44.83 3.67
3264 3919 2.437413 GTTCCTCCCATCAGTTGGTTC 58.563 52.381 0.00 0.00 44.83 3.62
3265 3920 0.613260 TCCTCCCATCAGTTGGTTCG 59.387 55.000 0.00 0.00 44.83 3.95
3266 3921 1.026718 CCTCCCATCAGTTGGTTCGC 61.027 60.000 0.00 0.00 44.83 4.70
3267 3922 1.002624 TCCCATCAGTTGGTTCGCC 60.003 57.895 0.00 0.00 44.83 5.54
3271 3927 1.942657 CCATCAGTTGGTTCGCCTATG 59.057 52.381 0.00 0.00 40.99 2.23
3272 3928 1.942657 CATCAGTTGGTTCGCCTATGG 59.057 52.381 0.00 0.00 38.36 2.74
3282 3938 6.875035 TGGTTCGCCTATGGAACATTTGGT 62.875 45.833 6.95 0.00 44.29 3.67
3304 3960 7.822658 TGGTTGTAGTAAATATTGAAGTTGCC 58.177 34.615 0.00 0.00 0.00 4.52
3305 3961 7.448777 TGGTTGTAGTAAATATTGAAGTTGCCA 59.551 33.333 0.00 0.00 0.00 4.92
3346 4024 9.891828 AACATATATTGTGTGTGTGTAAAGTTG 57.108 29.630 0.00 0.00 38.99 3.16
3350 4028 5.455056 TTGTGTGTGTGTAAAGTTGGTTT 57.545 34.783 0.00 0.00 0.00 3.27
3354 4032 5.343860 GTGTGTGTGTAAAGTTGGTTTTGTC 59.656 40.000 0.00 0.00 0.00 3.18
3364 4042 3.636764 AGTTGGTTTTGTCCCATCTGAAC 59.363 43.478 0.00 0.00 32.16 3.18
3393 4071 4.519540 AAGTTATGGTTGTGATGGTTGC 57.480 40.909 0.00 0.00 0.00 4.17
3402 4080 3.266510 TGTGATGGTTGCTGTATCTCC 57.733 47.619 0.00 0.00 0.00 3.71
3409 4087 2.224402 GGTTGCTGTATCTCCCATCCTC 60.224 54.545 0.00 0.00 0.00 3.71
3414 4092 2.036992 CTGTATCTCCCATCCTCTGTGC 59.963 54.545 0.00 0.00 0.00 4.57
3442 4120 4.276678 GCTAGTGATTTTATCCTGCATGCA 59.723 41.667 21.29 21.29 0.00 3.96
3445 4123 6.964807 AGTGATTTTATCCTGCATGCATAA 57.035 33.333 22.97 14.33 0.00 1.90
3446 4124 6.978338 AGTGATTTTATCCTGCATGCATAAG 58.022 36.000 22.97 13.30 0.00 1.73
3462 4143 3.870419 GCATAAGGCTTCTCAGTTCTCTG 59.130 47.826 1.30 0.00 40.20 3.35
3463 4144 4.382470 GCATAAGGCTTCTCAGTTCTCTGA 60.382 45.833 1.30 0.00 42.88 3.27
3464 4145 5.684552 GCATAAGGCTTCTCAGTTCTCTGAT 60.685 44.000 1.30 0.00 43.49 2.90
3465 4146 7.130014 GCATAAGGCTTCTCAGTTCTCTGATT 61.130 42.308 1.30 0.00 43.49 2.57
3466 4147 8.846055 GCATAAGGCTTCTCAGTTCTCTGATTC 61.846 44.444 1.30 0.00 43.49 2.52
3491 4172 3.084039 CAAGGCAGAGGCTGAATGTTTA 58.916 45.455 0.00 0.00 38.81 2.01
3499 4180 5.121454 CAGAGGCTGAATGTTTACTTCTCAC 59.879 44.000 0.00 0.00 32.44 3.51
3533 4214 8.822805 TCCATTATATTATACTCCCTGTGTTCC 58.177 37.037 0.00 0.00 0.00 3.62
3534 4215 8.602424 CCATTATATTATACTCCCTGTGTTCCA 58.398 37.037 0.00 0.00 0.00 3.53
3540 4221 8.747538 ATTATACTCCCTGTGTTCCAAATTAC 57.252 34.615 0.00 0.00 0.00 1.89
3541 4222 4.724279 ACTCCCTGTGTTCCAAATTACT 57.276 40.909 0.00 0.00 0.00 2.24
3542 4223 5.061721 ACTCCCTGTGTTCCAAATTACTT 57.938 39.130 0.00 0.00 0.00 2.24
3543 4224 4.827284 ACTCCCTGTGTTCCAAATTACTTG 59.173 41.667 0.00 0.00 34.52 3.16
3544 4225 4.798882 TCCCTGTGTTCCAAATTACTTGT 58.201 39.130 0.00 0.00 32.65 3.16
3545 4226 4.825085 TCCCTGTGTTCCAAATTACTTGTC 59.175 41.667 0.00 0.00 32.65 3.18
3546 4227 4.320202 CCCTGTGTTCCAAATTACTTGTCG 60.320 45.833 0.00 0.00 32.65 4.35
3547 4228 4.274950 CCTGTGTTCCAAATTACTTGTCGT 59.725 41.667 0.00 0.00 32.65 4.34
3548 4229 5.163302 TGTGTTCCAAATTACTTGTCGTG 57.837 39.130 0.00 0.00 32.65 4.35
3549 4230 4.035792 TGTGTTCCAAATTACTTGTCGTGG 59.964 41.667 0.00 0.00 32.65 4.94
3550 4231 4.035909 GTGTTCCAAATTACTTGTCGTGGT 59.964 41.667 0.00 0.00 32.65 4.16
3551 4232 4.641094 TGTTCCAAATTACTTGTCGTGGTT 59.359 37.500 0.00 0.00 32.65 3.67
3552 4233 5.125739 TGTTCCAAATTACTTGTCGTGGTTT 59.874 36.000 0.00 0.00 32.65 3.27
3553 4234 5.838531 TCCAAATTACTTGTCGTGGTTTT 57.161 34.783 0.00 0.00 32.65 2.43
3554 4235 6.939132 TCCAAATTACTTGTCGTGGTTTTA 57.061 33.333 0.00 0.00 32.65 1.52
3555 4236 6.961576 TCCAAATTACTTGTCGTGGTTTTAG 58.038 36.000 0.00 0.00 32.65 1.85
3556 4237 6.543100 TCCAAATTACTTGTCGTGGTTTTAGT 59.457 34.615 0.00 0.00 32.65 2.24
3557 4238 7.067251 TCCAAATTACTTGTCGTGGTTTTAGTT 59.933 33.333 0.00 0.00 32.65 2.24
3558 4239 7.377662 CCAAATTACTTGTCGTGGTTTTAGTTC 59.622 37.037 0.00 0.00 32.65 3.01
3559 4240 5.640218 TTACTTGTCGTGGTTTTAGTTCG 57.360 39.130 0.00 0.00 0.00 3.95
3560 4241 3.784338 ACTTGTCGTGGTTTTAGTTCGA 58.216 40.909 0.00 0.00 0.00 3.71
3561 4242 3.800506 ACTTGTCGTGGTTTTAGTTCGAG 59.199 43.478 0.00 0.00 0.00 4.04
3562 4243 3.441496 TGTCGTGGTTTTAGTTCGAGT 57.559 42.857 0.00 0.00 0.00 4.18
3563 4244 3.784338 TGTCGTGGTTTTAGTTCGAGTT 58.216 40.909 0.00 0.00 0.00 3.01
3564 4245 3.798337 TGTCGTGGTTTTAGTTCGAGTTC 59.202 43.478 0.00 0.00 0.00 3.01
3565 4246 3.183172 GTCGTGGTTTTAGTTCGAGTTCC 59.817 47.826 0.00 0.00 0.00 3.62
3566 4247 3.125316 CGTGGTTTTAGTTCGAGTTCCA 58.875 45.455 0.00 0.00 0.00 3.53
3567 4248 3.556775 CGTGGTTTTAGTTCGAGTTCCAA 59.443 43.478 0.00 0.00 0.00 3.53
3568 4249 4.034279 CGTGGTTTTAGTTCGAGTTCCAAA 59.966 41.667 0.00 0.00 0.00 3.28
3569 4250 5.277634 CGTGGTTTTAGTTCGAGTTCCAAAT 60.278 40.000 0.00 0.00 0.00 2.32
3570 4251 6.500910 GTGGTTTTAGTTCGAGTTCCAAATT 58.499 36.000 0.00 0.00 0.00 1.82
3571 4252 7.518689 CGTGGTTTTAGTTCGAGTTCCAAATTA 60.519 37.037 0.00 0.00 0.00 1.40
3572 4253 7.588854 GTGGTTTTAGTTCGAGTTCCAAATTAC 59.411 37.037 0.00 0.00 0.00 1.89
3573 4254 7.499895 TGGTTTTAGTTCGAGTTCCAAATTACT 59.500 33.333 0.00 0.00 0.00 2.24
3574 4255 8.347771 GGTTTTAGTTCGAGTTCCAAATTACTT 58.652 33.333 0.00 0.00 0.00 2.24
3575 4256 9.166126 GTTTTAGTTCGAGTTCCAAATTACTTG 57.834 33.333 0.00 0.00 34.52 3.16
3576 4257 8.441312 TTTAGTTCGAGTTCCAAATTACTTGT 57.559 30.769 0.00 0.00 32.65 3.16
3577 4258 6.541111 AGTTCGAGTTCCAAATTACTTGTC 57.459 37.500 0.00 0.00 32.65 3.18
3578 4259 5.176958 AGTTCGAGTTCCAAATTACTTGTCG 59.823 40.000 0.00 0.00 33.41 4.35
3579 4260 4.624015 TCGAGTTCCAAATTACTTGTCGT 58.376 39.130 0.00 0.00 33.69 4.34
3580 4261 4.446385 TCGAGTTCCAAATTACTTGTCGTG 59.554 41.667 0.00 0.00 33.69 4.35
3581 4262 4.377022 CGAGTTCCAAATTACTTGTCGTGG 60.377 45.833 0.00 0.00 32.65 4.94
3582 4263 4.457466 AGTTCCAAATTACTTGTCGTGGT 58.543 39.130 0.00 0.00 32.65 4.16
3583 4264 4.885325 AGTTCCAAATTACTTGTCGTGGTT 59.115 37.500 0.00 0.00 32.65 3.67
3584 4265 5.358725 AGTTCCAAATTACTTGTCGTGGTTT 59.641 36.000 0.00 0.00 32.65 3.27
3585 4266 5.838531 TCCAAATTACTTGTCGTGGTTTT 57.161 34.783 0.00 0.00 32.65 2.43
3586 4267 6.939132 TCCAAATTACTTGTCGTGGTTTTA 57.061 33.333 0.00 0.00 32.65 1.52
3587 4268 6.961576 TCCAAATTACTTGTCGTGGTTTTAG 58.038 36.000 0.00 0.00 32.65 1.85
3588 4269 6.543100 TCCAAATTACTTGTCGTGGTTTTAGT 59.457 34.615 0.00 0.00 32.65 2.24
3589 4270 7.067251 TCCAAATTACTTGTCGTGGTTTTAGTT 59.933 33.333 0.00 0.00 32.65 2.24
3590 4271 7.377662 CCAAATTACTTGTCGTGGTTTTAGTTC 59.622 37.037 0.00 0.00 32.65 3.01
3591 4272 7.556733 AATTACTTGTCGTGGTTTTAGTTCA 57.443 32.000 0.00 0.00 0.00 3.18
3592 4273 6.981762 TTACTTGTCGTGGTTTTAGTTCAA 57.018 33.333 0.00 0.00 0.00 2.69
3593 4274 5.883503 ACTTGTCGTGGTTTTAGTTCAAA 57.116 34.783 0.00 0.00 0.00 2.69
3594 4275 6.445357 ACTTGTCGTGGTTTTAGTTCAAAT 57.555 33.333 0.00 0.00 0.00 2.32
3595 4276 6.859017 ACTTGTCGTGGTTTTAGTTCAAATT 58.141 32.000 0.00 0.00 0.00 1.82
3596 4277 7.317390 ACTTGTCGTGGTTTTAGTTCAAATTT 58.683 30.769 0.00 0.00 0.00 1.82
3597 4278 7.274686 ACTTGTCGTGGTTTTAGTTCAAATTTG 59.725 33.333 12.15 12.15 0.00 2.32
3598 4279 6.853720 TGTCGTGGTTTTAGTTCAAATTTGA 58.146 32.000 16.91 16.91 34.92 2.69
3599 4280 7.313646 TGTCGTGGTTTTAGTTCAAATTTGAA 58.686 30.769 26.01 26.01 44.31 2.69
3614 4295 9.658799 TTCAAATTTGAACTAAAACCATGACAA 57.341 25.926 26.01 1.80 41.88 3.18
3615 4296 9.311916 TCAAATTTGAACTAAAACCATGACAAG 57.688 29.630 18.45 0.00 33.55 3.16
3616 4297 9.097257 CAAATTTGAACTAAAACCATGACAAGT 57.903 29.630 13.08 0.00 0.00 3.16
3622 4303 9.743057 TGAACTAAAACCATGACAAGTAATTTG 57.257 29.630 0.00 0.00 42.68 2.32
3623 4304 9.191995 GAACTAAAACCATGACAAGTAATTTGG 57.808 33.333 0.00 0.00 41.25 3.28
3624 4305 8.472007 ACTAAAACCATGACAAGTAATTTGGA 57.528 30.769 0.00 0.00 41.25 3.53
3625 4306 8.919145 ACTAAAACCATGACAAGTAATTTGGAA 58.081 29.630 0.00 0.00 41.25 3.53
3626 4307 9.191995 CTAAAACCATGACAAGTAATTTGGAAC 57.808 33.333 0.00 0.00 41.25 3.62
3627 4308 5.371115 ACCATGACAAGTAATTTGGAACG 57.629 39.130 0.00 0.00 41.25 3.95
3628 4309 4.217550 ACCATGACAAGTAATTTGGAACGG 59.782 41.667 0.00 0.00 41.25 4.44
3629 4310 4.457603 CCATGACAAGTAATTTGGAACGGA 59.542 41.667 0.00 0.00 41.25 4.69
3630 4311 5.391950 CCATGACAAGTAATTTGGAACGGAG 60.392 44.000 0.00 0.00 41.25 4.63
3631 4312 4.069304 TGACAAGTAATTTGGAACGGAGG 58.931 43.478 0.00 0.00 41.25 4.30
3632 4313 3.418047 ACAAGTAATTTGGAACGGAGGG 58.582 45.455 0.00 0.00 41.25 4.30
3633 4314 3.073356 ACAAGTAATTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 41.25 4.20
3634 4315 3.629142 AGTAATTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
3635 4316 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
3636 4317 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
3637 4318 4.720273 AGTAATTTGGAACGGAGGGAGTAT 59.280 41.667 0.00 0.00 0.00 2.12
3638 4319 5.901276 AGTAATTTGGAACGGAGGGAGTATA 59.099 40.000 0.00 0.00 0.00 1.47
3639 4320 5.703730 AATTTGGAACGGAGGGAGTATAA 57.296 39.130 0.00 0.00 0.00 0.98
3640 4321 5.703730 ATTTGGAACGGAGGGAGTATAAA 57.296 39.130 0.00 0.00 0.00 1.40
3641 4322 5.502089 TTTGGAACGGAGGGAGTATAAAA 57.498 39.130 0.00 0.00 0.00 1.52
3642 4323 4.748277 TGGAACGGAGGGAGTATAAAAG 57.252 45.455 0.00 0.00 0.00 2.27
3643 4324 4.355549 TGGAACGGAGGGAGTATAAAAGA 58.644 43.478 0.00 0.00 0.00 2.52
3644 4325 4.778958 TGGAACGGAGGGAGTATAAAAGAA 59.221 41.667 0.00 0.00 0.00 2.52
3645 4326 5.248934 TGGAACGGAGGGAGTATAAAAGAAA 59.751 40.000 0.00 0.00 0.00 2.52
3646 4327 6.069847 TGGAACGGAGGGAGTATAAAAGAAAT 60.070 38.462 0.00 0.00 0.00 2.17
3647 4328 7.126115 TGGAACGGAGGGAGTATAAAAGAAATA 59.874 37.037 0.00 0.00 0.00 1.40
3648 4329 8.155510 GGAACGGAGGGAGTATAAAAGAAATAT 58.844 37.037 0.00 0.00 0.00 1.28
3675 4356 8.846943 TTGAGATGTGTAGATGTACATGTTTT 57.153 30.769 14.43 0.00 41.29 2.43
3676 4357 8.846943 TGAGATGTGTAGATGTACATGTTTTT 57.153 30.769 14.43 0.00 41.29 1.94
3721 4402 8.032451 TGGCCTTTATTAAACATCAAAAGTAGC 58.968 33.333 3.32 0.00 0.00 3.58
3722 4403 8.251026 GGCCTTTATTAAACATCAAAAGTAGCT 58.749 33.333 0.00 0.00 0.00 3.32
3723 4404 9.639601 GCCTTTATTAAACATCAAAAGTAGCTT 57.360 29.630 0.00 0.00 0.00 3.74
3726 4407 8.980143 TTATTAAACATCAAAAGTAGCTTGCC 57.020 30.769 0.00 0.00 0.00 4.52
3727 4408 4.935352 AAACATCAAAAGTAGCTTGCCA 57.065 36.364 0.00 0.00 0.00 4.92
3728 4409 4.935352 AACATCAAAAGTAGCTTGCCAA 57.065 36.364 0.00 0.00 0.00 4.52
3729 4410 4.243007 ACATCAAAAGTAGCTTGCCAAC 57.757 40.909 0.00 0.00 0.00 3.77
3730 4411 3.636300 ACATCAAAAGTAGCTTGCCAACA 59.364 39.130 0.00 0.00 0.00 3.33
3731 4412 3.708563 TCAAAAGTAGCTTGCCAACAC 57.291 42.857 0.00 0.00 0.00 3.32
3732 4413 2.032799 TCAAAAGTAGCTTGCCAACACG 59.967 45.455 0.00 0.00 0.00 4.49
3733 4414 1.961793 AAAGTAGCTTGCCAACACGA 58.038 45.000 0.00 0.00 0.00 4.35
3734 4415 1.226746 AAGTAGCTTGCCAACACGAC 58.773 50.000 0.00 0.00 0.00 4.34
3735 4416 0.393077 AGTAGCTTGCCAACACGACT 59.607 50.000 0.00 0.00 0.00 4.18
3736 4417 0.512952 GTAGCTTGCCAACACGACTG 59.487 55.000 0.00 0.00 0.00 3.51
3737 4418 0.391228 TAGCTTGCCAACACGACTGA 59.609 50.000 0.00 0.00 0.00 3.41
3738 4419 0.882042 AGCTTGCCAACACGACTGAG 60.882 55.000 0.00 0.00 0.00 3.35
3739 4420 1.845809 GCTTGCCAACACGACTGAGG 61.846 60.000 0.00 0.00 0.00 3.86
3740 4421 0.249868 CTTGCCAACACGACTGAGGA 60.250 55.000 0.00 0.00 0.00 3.71
3741 4422 0.396435 TTGCCAACACGACTGAGGAT 59.604 50.000 0.00 0.00 0.00 3.24
3742 4423 0.037326 TGCCAACACGACTGAGGATC 60.037 55.000 0.00 0.00 0.00 3.36
3743 4424 1.078759 GCCAACACGACTGAGGATCG 61.079 60.000 0.00 0.00 45.17 3.69
3749 4430 3.553597 CGACTGAGGATCGTAAGGC 57.446 57.895 4.79 0.00 38.61 4.35
3750 4431 1.025812 CGACTGAGGATCGTAAGGCT 58.974 55.000 4.09 0.00 38.61 4.58
3751 4432 1.002251 CGACTGAGGATCGTAAGGCTC 60.002 57.143 4.09 0.00 38.61 4.70
3752 4433 2.025155 GACTGAGGATCGTAAGGCTCA 58.975 52.381 4.79 1.41 38.61 4.26
3753 4434 2.625790 GACTGAGGATCGTAAGGCTCAT 59.374 50.000 4.79 0.00 38.61 2.90
3754 4435 2.363680 ACTGAGGATCGTAAGGCTCATG 59.636 50.000 4.79 0.00 38.61 3.07
3755 4436 2.363680 CTGAGGATCGTAAGGCTCATGT 59.636 50.000 0.00 0.00 38.61 3.21
3756 4437 2.766263 TGAGGATCGTAAGGCTCATGTT 59.234 45.455 0.00 0.00 38.61 2.71
3757 4438 3.197766 TGAGGATCGTAAGGCTCATGTTT 59.802 43.478 0.00 0.00 38.61 2.83
3758 4439 4.192317 GAGGATCGTAAGGCTCATGTTTT 58.808 43.478 0.00 0.00 38.47 2.43
3759 4440 4.192317 AGGATCGTAAGGCTCATGTTTTC 58.808 43.478 0.00 0.00 38.47 2.29
3760 4441 3.938963 GGATCGTAAGGCTCATGTTTTCA 59.061 43.478 0.00 0.00 38.47 2.69
3761 4442 4.034510 GGATCGTAAGGCTCATGTTTTCAG 59.965 45.833 0.00 0.00 38.47 3.02
3762 4443 2.742053 TCGTAAGGCTCATGTTTTCAGC 59.258 45.455 0.00 0.00 38.47 4.26
3763 4444 2.744202 CGTAAGGCTCATGTTTTCAGCT 59.256 45.455 3.65 0.00 0.00 4.24
3764 4445 3.425359 CGTAAGGCTCATGTTTTCAGCTG 60.425 47.826 7.63 7.63 0.00 4.24
3765 4446 2.574006 AGGCTCATGTTTTCAGCTGA 57.426 45.000 13.74 13.74 0.00 4.26
3766 4447 2.867624 AGGCTCATGTTTTCAGCTGAA 58.132 42.857 25.16 25.16 0.00 3.02
3767 4448 2.818432 AGGCTCATGTTTTCAGCTGAAG 59.182 45.455 27.02 16.36 35.21 3.02
3768 4449 2.593257 GCTCATGTTTTCAGCTGAAGC 58.407 47.619 27.02 21.30 42.49 3.86
3785 4466 2.867109 AGCTTAGCTTTGCAAGAGGA 57.133 45.000 0.00 0.00 33.89 3.71
3786 4467 2.709213 AGCTTAGCTTTGCAAGAGGAG 58.291 47.619 0.00 0.00 33.89 3.69
3787 4468 1.742268 GCTTAGCTTTGCAAGAGGAGG 59.258 52.381 0.00 0.00 0.00 4.30
3788 4469 2.363683 CTTAGCTTTGCAAGAGGAGGG 58.636 52.381 0.00 0.00 0.00 4.30
3789 4470 0.035056 TAGCTTTGCAAGAGGAGGGC 60.035 55.000 0.00 0.00 0.00 5.19
3790 4471 1.604593 GCTTTGCAAGAGGAGGGCA 60.605 57.895 0.00 0.00 35.41 5.36
3791 4472 1.181098 GCTTTGCAAGAGGAGGGCAA 61.181 55.000 0.00 0.00 44.97 4.52
3792 4473 0.886563 CTTTGCAAGAGGAGGGCAAG 59.113 55.000 0.00 0.00 46.82 4.01
3793 4474 0.478072 TTTGCAAGAGGAGGGCAAGA 59.522 50.000 0.00 0.00 46.82 3.02
3794 4475 0.478072 TTGCAAGAGGAGGGCAAGAA 59.522 50.000 0.00 0.00 42.12 2.52
3795 4476 0.478072 TGCAAGAGGAGGGCAAGAAA 59.522 50.000 0.00 0.00 34.05 2.52
3796 4477 1.172175 GCAAGAGGAGGGCAAGAAAG 58.828 55.000 0.00 0.00 0.00 2.62
3797 4478 1.831580 CAAGAGGAGGGCAAGAAAGG 58.168 55.000 0.00 0.00 0.00 3.11
3798 4479 0.038890 AAGAGGAGGGCAAGAAAGGC 59.961 55.000 0.00 0.00 0.00 4.35
3799 4480 1.136329 AGAGGAGGGCAAGAAAGGCA 61.136 55.000 0.00 0.00 35.46 4.75
3800 4481 0.033699 GAGGAGGGCAAGAAAGGCAT 60.034 55.000 0.00 0.00 35.46 4.40
3801 4482 0.324091 AGGAGGGCAAGAAAGGCATG 60.324 55.000 0.00 0.00 35.46 4.06
3802 4483 0.323725 GGAGGGCAAGAAAGGCATGA 60.324 55.000 0.00 0.00 35.46 3.07
3803 4484 1.687368 GGAGGGCAAGAAAGGCATGAT 60.687 52.381 0.00 0.00 35.46 2.45
3804 4485 1.680207 GAGGGCAAGAAAGGCATGATC 59.320 52.381 0.00 0.00 35.46 2.92
3805 4486 1.287146 AGGGCAAGAAAGGCATGATCT 59.713 47.619 0.00 0.00 35.46 2.75
3806 4487 2.105766 GGGCAAGAAAGGCATGATCTT 58.894 47.619 0.00 0.00 33.83 2.40
3807 4488 2.498885 GGGCAAGAAAGGCATGATCTTT 59.501 45.455 12.35 12.35 37.18 2.52
3808 4489 3.055602 GGGCAAGAAAGGCATGATCTTTT 60.056 43.478 13.31 0.00 34.92 2.27
3809 4490 4.179298 GGCAAGAAAGGCATGATCTTTTC 58.821 43.478 13.31 7.56 34.92 2.29
3810 4491 4.179298 GCAAGAAAGGCATGATCTTTTCC 58.821 43.478 13.31 4.96 34.92 3.13
3811 4492 4.322198 GCAAGAAAGGCATGATCTTTTCCA 60.322 41.667 13.31 0.00 34.92 3.53
3812 4493 5.408356 CAAGAAAGGCATGATCTTTTCCAG 58.592 41.667 13.31 1.50 34.92 3.86
3813 4494 4.927049 AGAAAGGCATGATCTTTTCCAGA 58.073 39.130 13.31 0.00 34.92 3.86
3814 4495 5.516984 AGAAAGGCATGATCTTTTCCAGAT 58.483 37.500 13.31 0.00 45.86 2.90
3815 4496 5.956563 AGAAAGGCATGATCTTTTCCAGATT 59.043 36.000 13.31 0.00 42.92 2.40
3816 4497 5.593679 AAGGCATGATCTTTTCCAGATTG 57.406 39.130 0.00 0.00 42.92 2.67
3817 4498 3.383825 AGGCATGATCTTTTCCAGATTGC 59.616 43.478 0.00 1.43 42.92 3.56
3818 4499 3.714391 GCATGATCTTTTCCAGATTGCC 58.286 45.455 0.00 0.00 42.92 4.52
3819 4500 3.383825 GCATGATCTTTTCCAGATTGCCT 59.616 43.478 0.00 0.00 42.92 4.75
3820 4501 4.736759 GCATGATCTTTTCCAGATTGCCTG 60.737 45.833 0.00 0.00 42.92 4.85
3821 4502 2.756760 TGATCTTTTCCAGATTGCCTGC 59.243 45.455 0.00 0.00 42.92 4.85
3822 4503 2.291209 TCTTTTCCAGATTGCCTGCA 57.709 45.000 0.00 0.00 41.57 4.41
3823 4504 2.811410 TCTTTTCCAGATTGCCTGCAT 58.189 42.857 0.00 0.00 41.57 3.96
3824 4505 3.167485 TCTTTTCCAGATTGCCTGCATT 58.833 40.909 0.00 0.00 41.57 3.56
3825 4506 3.579586 TCTTTTCCAGATTGCCTGCATTT 59.420 39.130 0.00 0.00 41.57 2.32
3826 4507 4.040706 TCTTTTCCAGATTGCCTGCATTTT 59.959 37.500 0.00 0.00 41.57 1.82
3827 4508 3.598019 TTCCAGATTGCCTGCATTTTC 57.402 42.857 0.00 0.00 41.57 2.29
3828 4509 2.811410 TCCAGATTGCCTGCATTTTCT 58.189 42.857 0.00 0.00 41.57 2.52
3829 4510 2.756760 TCCAGATTGCCTGCATTTTCTC 59.243 45.455 0.00 0.00 41.57 2.87
3830 4511 2.758979 CCAGATTGCCTGCATTTTCTCT 59.241 45.455 0.00 0.00 41.57 3.10
3831 4512 3.194968 CCAGATTGCCTGCATTTTCTCTT 59.805 43.478 0.00 0.00 41.57 2.85
3832 4513 4.174009 CAGATTGCCTGCATTTTCTCTTG 58.826 43.478 0.00 0.00 35.89 3.02
3833 4514 3.830755 AGATTGCCTGCATTTTCTCTTGT 59.169 39.130 0.00 0.00 0.00 3.16
3834 4515 3.374220 TTGCCTGCATTTTCTCTTGTG 57.626 42.857 0.00 0.00 0.00 3.33
3835 4516 2.309613 TGCCTGCATTTTCTCTTGTGT 58.690 42.857 0.00 0.00 0.00 3.72
3836 4517 2.694628 TGCCTGCATTTTCTCTTGTGTT 59.305 40.909 0.00 0.00 0.00 3.32
3837 4518 3.054878 GCCTGCATTTTCTCTTGTGTTG 58.945 45.455 0.00 0.00 0.00 3.33
3838 4519 3.491447 GCCTGCATTTTCTCTTGTGTTGT 60.491 43.478 0.00 0.00 0.00 3.32
3839 4520 4.261572 GCCTGCATTTTCTCTTGTGTTGTA 60.262 41.667 0.00 0.00 0.00 2.41
3840 4521 5.565439 GCCTGCATTTTCTCTTGTGTTGTAT 60.565 40.000 0.00 0.00 0.00 2.29
3841 4522 6.449698 CCTGCATTTTCTCTTGTGTTGTATT 58.550 36.000 0.00 0.00 0.00 1.89
3842 4523 6.583806 CCTGCATTTTCTCTTGTGTTGTATTC 59.416 38.462 0.00 0.00 0.00 1.75
3843 4524 7.275888 TGCATTTTCTCTTGTGTTGTATTCT 57.724 32.000 0.00 0.00 0.00 2.40
3844 4525 7.362662 TGCATTTTCTCTTGTGTTGTATTCTC 58.637 34.615 0.00 0.00 0.00 2.87
3845 4526 7.229306 TGCATTTTCTCTTGTGTTGTATTCTCT 59.771 33.333 0.00 0.00 0.00 3.10
3846 4527 7.748241 GCATTTTCTCTTGTGTTGTATTCTCTC 59.252 37.037 0.00 0.00 0.00 3.20
3847 4528 7.730364 TTTTCTCTTGTGTTGTATTCTCTCC 57.270 36.000 0.00 0.00 0.00 3.71
3848 4529 5.407407 TCTCTTGTGTTGTATTCTCTCCC 57.593 43.478 0.00 0.00 0.00 4.30
3849 4530 4.223032 TCTCTTGTGTTGTATTCTCTCCCC 59.777 45.833 0.00 0.00 0.00 4.81
3850 4531 3.263425 TCTTGTGTTGTATTCTCTCCCCC 59.737 47.826 0.00 0.00 0.00 5.40
3869 4550 4.796606 CCCCCTTCACAAATATGAGATGT 58.203 43.478 0.00 0.00 0.00 3.06
3870 4551 5.203528 CCCCCTTCACAAATATGAGATGTT 58.796 41.667 0.00 0.00 0.00 2.71
3871 4552 5.300286 CCCCCTTCACAAATATGAGATGTTC 59.700 44.000 0.00 0.00 0.00 3.18
3872 4553 6.125029 CCCCTTCACAAATATGAGATGTTCT 58.875 40.000 0.00 0.00 0.00 3.01
3873 4554 7.282585 CCCCTTCACAAATATGAGATGTTCTA 58.717 38.462 0.00 0.00 0.00 2.10
3874 4555 7.775093 CCCCTTCACAAATATGAGATGTTCTAA 59.225 37.037 0.00 0.00 0.00 2.10
3875 4556 8.616076 CCCTTCACAAATATGAGATGTTCTAAC 58.384 37.037 0.00 0.00 0.00 2.34
3876 4557 9.388506 CCTTCACAAATATGAGATGTTCTAACT 57.611 33.333 0.00 0.00 0.00 2.24
3905 4586 8.989653 TTGTGAATCAAACGTATATAGACACA 57.010 30.769 0.00 0.00 32.64 3.72
3906 4587 9.594478 TTGTGAATCAAACGTATATAGACACAT 57.406 29.630 0.00 0.00 34.33 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 6.716934 AGAAGAATATCAGTACCATGTCGT 57.283 37.500 0.00 0.00 0.00 4.34
55 56 7.380870 CAGAAGAAGAATATCAGTACCATGTCG 59.619 40.741 0.00 0.00 0.00 4.35
148 149 8.087136 CAGCAAGAATCTAGTCATCTAATAGCA 58.913 37.037 0.00 0.00 0.00 3.49
213 858 7.809806 AGAATTCCAAAACTGATTTTCATCGAC 59.190 33.333 0.65 0.00 35.79 4.20
245 890 7.662897 AGAAAAATTCCGGCTGTGTATTAAAA 58.337 30.769 0.00 0.00 0.00 1.52
285 931 5.855045 ACTTATATTTAGCAACGGAGGGAG 58.145 41.667 0.00 0.00 0.00 4.30
286 932 5.601313 AGACTTATATTTAGCAACGGAGGGA 59.399 40.000 0.00 0.00 0.00 4.20
288 934 7.787725 AAAGACTTATATTTAGCAACGGAGG 57.212 36.000 0.00 0.00 0.00 4.30
307 953 7.549842 GTCCCTTATTGGAGTCTCTAAAAAGAC 59.450 40.741 2.42 3.29 44.96 3.01
308 954 7.458170 AGTCCCTTATTGGAGTCTCTAAAAAGA 59.542 37.037 2.42 0.00 32.38 2.52
309 955 7.625469 AGTCCCTTATTGGAGTCTCTAAAAAG 58.375 38.462 2.42 1.62 32.38 2.27
310 956 7.569599 AGTCCCTTATTGGAGTCTCTAAAAA 57.430 36.000 2.42 0.00 32.38 1.94
311 957 7.676893 TGTAGTCCCTTATTGGAGTCTCTAAAA 59.323 37.037 2.42 0.00 38.94 1.52
312 958 7.186972 TGTAGTCCCTTATTGGAGTCTCTAAA 58.813 38.462 2.42 0.00 38.94 1.85
313 959 6.738635 TGTAGTCCCTTATTGGAGTCTCTAA 58.261 40.000 0.60 0.60 38.94 2.10
314 960 6.337185 TGTAGTCCCTTATTGGAGTCTCTA 57.663 41.667 0.00 0.00 38.94 2.43
315 961 5.208294 TGTAGTCCCTTATTGGAGTCTCT 57.792 43.478 0.00 0.00 38.94 3.10
316 962 6.294065 CGTATGTAGTCCCTTATTGGAGTCTC 60.294 46.154 0.00 0.00 38.94 3.36
317 963 5.535406 CGTATGTAGTCCCTTATTGGAGTCT 59.465 44.000 0.00 0.00 38.94 3.24
318 964 5.278858 CCGTATGTAGTCCCTTATTGGAGTC 60.279 48.000 0.00 0.00 38.94 3.36
319 965 4.587684 CCGTATGTAGTCCCTTATTGGAGT 59.412 45.833 0.00 0.00 41.10 3.85
320 966 4.831155 TCCGTATGTAGTCCCTTATTGGAG 59.169 45.833 0.00 0.00 38.35 3.86
321 967 4.806892 TCCGTATGTAGTCCCTTATTGGA 58.193 43.478 0.00 0.00 38.35 3.53
322 968 4.560919 GCTCCGTATGTAGTCCCTTATTGG 60.561 50.000 0.00 0.00 0.00 3.16
323 969 4.038763 TGCTCCGTATGTAGTCCCTTATTG 59.961 45.833 0.00 0.00 0.00 1.90
324 970 4.220724 TGCTCCGTATGTAGTCCCTTATT 58.779 43.478 0.00 0.00 0.00 1.40
325 971 3.840991 TGCTCCGTATGTAGTCCCTTAT 58.159 45.455 0.00 0.00 0.00 1.73
326 972 3.301794 TGCTCCGTATGTAGTCCCTTA 57.698 47.619 0.00 0.00 0.00 2.69
327 973 2.154567 TGCTCCGTATGTAGTCCCTT 57.845 50.000 0.00 0.00 0.00 3.95
328 974 2.154567 TTGCTCCGTATGTAGTCCCT 57.845 50.000 0.00 0.00 0.00 4.20
329 975 2.973694 TTTGCTCCGTATGTAGTCCC 57.026 50.000 0.00 0.00 0.00 4.46
330 976 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
331 977 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
332 978 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
333 979 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
334 980 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
335 981 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
336 982 9.546909 GTATATTCATTCATTTTGCTCCGTATG 57.453 33.333 0.00 0.00 0.00 2.39
337 983 9.283768 TGTATATTCATTCATTTTGCTCCGTAT 57.716 29.630 0.00 0.00 0.00 3.06
338 984 8.556194 GTGTATATTCATTCATTTTGCTCCGTA 58.444 33.333 0.00 0.00 0.00 4.02
339 985 7.283127 AGTGTATATTCATTCATTTTGCTCCGT 59.717 33.333 0.00 0.00 0.00 4.69
340 986 7.642669 AGTGTATATTCATTCATTTTGCTCCG 58.357 34.615 0.00 0.00 0.00 4.63
341 987 8.844244 AGAGTGTATATTCATTCATTTTGCTCC 58.156 33.333 7.43 0.00 0.00 4.70
382 1028 9.872721 TTTCAATACAAACTACATACGGATGTA 57.127 29.630 19.32 19.32 44.77 2.29
384 1030 9.864034 GATTTCAATACAAACTACATACGGATG 57.136 33.333 5.94 5.94 39.16 3.51
385 1031 9.832445 AGATTTCAATACAAACTACATACGGAT 57.168 29.630 0.00 0.00 0.00 4.18
386 1032 9.309516 GAGATTTCAATACAAACTACATACGGA 57.690 33.333 0.00 0.00 0.00 4.69
387 1033 9.314321 AGAGATTTCAATACAAACTACATACGG 57.686 33.333 0.00 0.00 0.00 4.02
409 1055 9.712305 CTCCAGTTCTAAATGTCTTTTTAGAGA 57.288 33.333 6.72 2.05 44.65 3.10
410 1056 8.940952 CCTCCAGTTCTAAATGTCTTTTTAGAG 58.059 37.037 6.72 0.00 44.65 2.43
411 1057 7.883311 CCCTCCAGTTCTAAATGTCTTTTTAGA 59.117 37.037 3.23 3.23 43.18 2.10
412 1058 7.883311 TCCCTCCAGTTCTAAATGTCTTTTTAG 59.117 37.037 0.00 0.00 39.49 1.85
413 1059 7.751646 TCCCTCCAGTTCTAAATGTCTTTTTA 58.248 34.615 0.00 0.00 0.00 1.52
414 1060 6.610830 TCCCTCCAGTTCTAAATGTCTTTTT 58.389 36.000 0.00 0.00 0.00 1.94
415 1061 6.183361 ACTCCCTCCAGTTCTAAATGTCTTTT 60.183 38.462 0.00 0.00 0.00 2.27
416 1062 5.310857 ACTCCCTCCAGTTCTAAATGTCTTT 59.689 40.000 0.00 0.00 0.00 2.52
417 1063 4.846940 ACTCCCTCCAGTTCTAAATGTCTT 59.153 41.667 0.00 0.00 0.00 3.01
418 1064 4.430441 ACTCCCTCCAGTTCTAAATGTCT 58.570 43.478 0.00 0.00 0.00 3.41
419 1065 4.828072 ACTCCCTCCAGTTCTAAATGTC 57.172 45.455 0.00 0.00 0.00 3.06
420 1066 6.893020 ATTACTCCCTCCAGTTCTAAATGT 57.107 37.500 0.00 0.00 0.00 2.71
421 1067 7.338710 TCAATTACTCCCTCCAGTTCTAAATG 58.661 38.462 0.00 0.00 0.00 2.32
422 1068 7.510675 TCAATTACTCCCTCCAGTTCTAAAT 57.489 36.000 0.00 0.00 0.00 1.40
423 1069 6.945636 TCAATTACTCCCTCCAGTTCTAAA 57.054 37.500 0.00 0.00 0.00 1.85
424 1070 6.945636 TTCAATTACTCCCTCCAGTTCTAA 57.054 37.500 0.00 0.00 0.00 2.10
425 1071 6.945636 TTTCAATTACTCCCTCCAGTTCTA 57.054 37.500 0.00 0.00 0.00 2.10
426 1072 5.843019 TTTCAATTACTCCCTCCAGTTCT 57.157 39.130 0.00 0.00 0.00 3.01
427 1073 5.163612 GCATTTCAATTACTCCCTCCAGTTC 60.164 44.000 0.00 0.00 0.00 3.01
428 1074 4.706962 GCATTTCAATTACTCCCTCCAGTT 59.293 41.667 0.00 0.00 0.00 3.16
429 1075 4.018050 AGCATTTCAATTACTCCCTCCAGT 60.018 41.667 0.00 0.00 0.00 4.00
430 1076 4.530875 AGCATTTCAATTACTCCCTCCAG 58.469 43.478 0.00 0.00 0.00 3.86
431 1077 4.591321 AGCATTTCAATTACTCCCTCCA 57.409 40.909 0.00 0.00 0.00 3.86
432 1078 4.440663 GCAAGCATTTCAATTACTCCCTCC 60.441 45.833 0.00 0.00 0.00 4.30
433 1079 4.400567 AGCAAGCATTTCAATTACTCCCTC 59.599 41.667 0.00 0.00 0.00 4.30
434 1080 4.347607 AGCAAGCATTTCAATTACTCCCT 58.652 39.130 0.00 0.00 0.00 4.20
435 1081 4.725790 AGCAAGCATTTCAATTACTCCC 57.274 40.909 0.00 0.00 0.00 4.30
436 1082 7.483307 TGAATAGCAAGCATTTCAATTACTCC 58.517 34.615 7.07 0.00 0.00 3.85
437 1083 8.186821 ACTGAATAGCAAGCATTTCAATTACTC 58.813 33.333 9.78 0.00 0.00 2.59
438 1084 8.059798 ACTGAATAGCAAGCATTTCAATTACT 57.940 30.769 9.78 0.00 0.00 2.24
439 1085 9.787532 TTACTGAATAGCAAGCATTTCAATTAC 57.212 29.630 9.78 0.00 0.00 1.89
441 1087 8.742777 TCTTACTGAATAGCAAGCATTTCAATT 58.257 29.630 9.78 4.62 29.07 2.32
442 1088 8.284945 TCTTACTGAATAGCAAGCATTTCAAT 57.715 30.769 9.78 4.47 29.07 2.57
443 1089 7.148188 CCTCTTACTGAATAGCAAGCATTTCAA 60.148 37.037 9.78 0.00 29.07 2.69
444 1090 6.317140 CCTCTTACTGAATAGCAAGCATTTCA 59.683 38.462 8.65 8.65 29.07 2.69
445 1091 6.238593 CCCTCTTACTGAATAGCAAGCATTTC 60.239 42.308 0.00 0.00 29.07 2.17
446 1092 5.591877 CCCTCTTACTGAATAGCAAGCATTT 59.408 40.000 0.00 0.00 29.07 2.32
447 1093 5.128919 CCCTCTTACTGAATAGCAAGCATT 58.871 41.667 0.00 0.00 29.07 3.56
448 1094 4.445448 CCCCTCTTACTGAATAGCAAGCAT 60.445 45.833 0.00 0.00 29.07 3.79
449 1095 3.118261 CCCCTCTTACTGAATAGCAAGCA 60.118 47.826 0.00 0.00 29.07 3.91
450 1096 3.118223 ACCCCTCTTACTGAATAGCAAGC 60.118 47.826 0.00 0.00 29.07 4.01
451 1097 4.762289 ACCCCTCTTACTGAATAGCAAG 57.238 45.455 0.00 0.00 0.00 4.01
452 1098 6.824958 ATTACCCCTCTTACTGAATAGCAA 57.175 37.500 0.00 0.00 0.00 3.91
453 1099 7.073854 AGTATTACCCCTCTTACTGAATAGCA 58.926 38.462 0.00 0.00 0.00 3.49
454 1100 7.541916 AGTATTACCCCTCTTACTGAATAGC 57.458 40.000 0.00 0.00 0.00 2.97
455 1101 9.984190 GAAAGTATTACCCCTCTTACTGAATAG 57.016 37.037 0.00 0.00 0.00 1.73
499 1145 5.859114 CGAATCGTAGGTCTATGAAATCTGG 59.141 44.000 4.28 0.00 35.03 3.86
509 1155 5.021033 AGAGAACTCGAATCGTAGGTCTA 57.979 43.478 17.76 0.00 34.09 2.59
518 1164 6.692232 TCGAAAAGAAAGAGAACTCGAATC 57.308 37.500 0.00 0.00 31.50 2.52
561 1207 8.141298 TGTTATAAGATAGGGACAAGACAACA 57.859 34.615 0.00 0.00 0.00 3.33
581 1227 8.121305 TGAGACATAATGCCAACTTTTGTTAT 57.879 30.769 0.00 0.00 41.35 1.89
584 1230 5.047802 CCTGAGACATAATGCCAACTTTTGT 60.048 40.000 0.00 0.00 0.00 2.83
594 1240 3.134458 GCTACCACCTGAGACATAATGC 58.866 50.000 0.00 0.00 0.00 3.56
617 1263 7.038587 ACTGTAGGGTACTGTTCAATCATGTAA 60.039 37.037 0.00 0.00 37.54 2.41
642 1288 8.803397 AATTACCAAATTAGTCTGGGAAGTAC 57.197 34.615 0.00 0.00 38.95 2.73
717 1363 5.352293 GGAAAGGAAAATGGTCAATCAATGC 59.648 40.000 0.00 0.00 0.00 3.56
733 1379 1.701847 AGCTGCAGAGAAGGAAAGGAA 59.298 47.619 20.43 0.00 0.00 3.36
753 1399 2.885135 ATCTGGCCAAGTGAATCACA 57.115 45.000 16.38 0.00 36.74 3.58
762 1408 2.102578 CCAGGGTTTTATCTGGCCAAG 58.897 52.381 7.01 0.66 43.22 3.61
811 1457 8.627208 ATGAAGTTATTTCTTCTCAAAGCAGA 57.373 30.769 7.72 0.00 42.76 4.26
841 1487 1.478510 CCATCTTCCAGTGCTCTACGT 59.521 52.381 0.00 0.00 0.00 3.57
857 1503 5.124776 CCCTGAAGTATCTCTACGATCCATC 59.875 48.000 0.00 0.00 33.48 3.51
988 1635 4.141413 CCTGGGATCCATTGTTATCAGTGA 60.141 45.833 15.23 0.00 33.95 3.41
995 1642 1.215173 CAGGCCTGGGATCCATTGTTA 59.785 52.381 26.14 0.00 30.82 2.41
1014 1661 3.931907 ATAGTAAATGCTGACTGCCCA 57.068 42.857 1.50 0.00 42.00 5.36
1052 1699 0.244721 GAACTTGCTCACAATGGCCC 59.755 55.000 0.00 0.00 34.61 5.80
1083 1730 1.152118 TGTGGGGTGACTGGCTACT 60.152 57.895 0.00 0.00 0.00 2.57
1099 1746 7.099764 CCATCAAGTTGACTATTACTGTCTGT 58.900 38.462 7.96 0.00 35.63 3.41
1124 1771 1.009829 CAGATAACCGTGAGCTTGCC 58.990 55.000 0.00 0.00 0.00 4.52
1141 1788 3.485463 TCCTCTTGGTTGGTTGTACAG 57.515 47.619 0.00 0.00 34.23 2.74
1170 1817 1.969103 GCGACAAGCCATCAAACTTC 58.031 50.000 0.00 0.00 40.81 3.01
1380 2027 0.913451 ACTCAAGATCCAGCCCAGCT 60.913 55.000 0.00 0.00 40.77 4.24
1440 2087 3.118038 TGGTTGCTGAAGTTAGGTCTTGT 60.118 43.478 0.00 0.00 0.00 3.16
1564 2211 8.896744 CATCATTGCAGTCTTATTAAGGAAAGA 58.103 33.333 3.66 0.00 0.00 2.52
1565 2212 8.896744 TCATCATTGCAGTCTTATTAAGGAAAG 58.103 33.333 3.66 0.00 0.00 2.62
1586 2233 3.008375 CCTCAGAGAAAACCCAGTCATCA 59.992 47.826 0.00 0.00 0.00 3.07
1604 2251 3.084039 CTGCCTGATAAAACTTGCCTCA 58.916 45.455 0.00 0.00 0.00 3.86
1605 2252 2.159324 GCTGCCTGATAAAACTTGCCTC 60.159 50.000 0.00 0.00 0.00 4.70
1654 2301 1.636148 AGTTGGAGCAATGTTGGCAT 58.364 45.000 0.00 0.00 36.80 4.40
1826 2473 1.260544 GCCTTTGTTGCATCCCTCTT 58.739 50.000 0.00 0.00 0.00 2.85
1865 2512 1.839994 CCCCTCCATGAGCTTTACAGA 59.160 52.381 0.00 0.00 0.00 3.41
1932 2579 3.198409 TGGCCTATGCAGTAATCAGTG 57.802 47.619 3.32 0.00 40.13 3.66
1956 2603 1.079681 GATACAACGCCGACCACCA 60.080 57.895 0.00 0.00 0.00 4.17
1995 2642 1.039785 GGCCAGATTTCCCTCTTGCC 61.040 60.000 0.00 1.03 44.12 4.52
2019 2666 3.816398 TTCCCACCACCATGTTTGATA 57.184 42.857 0.00 0.00 0.00 2.15
2523 3170 4.154347 GGAGGACTGCCAGCTCCG 62.154 72.222 3.06 0.00 36.29 4.63
2535 3182 3.846405 AAGGCGGTCACAGGGAGGA 62.846 63.158 0.00 0.00 0.00 3.71
2580 3227 1.672030 CAGCAGCGGGTTGTGATGA 60.672 57.895 0.00 0.00 31.57 2.92
2595 3242 1.344438 TGGATACGGTCATCATCCAGC 59.656 52.381 6.31 0.00 42.55 4.85
2694 3341 4.093952 CTGCGCCTGCTGGTTTCG 62.094 66.667 4.18 7.57 43.34 3.46
2935 3585 2.433491 CGAAACGGATGTCGGGCA 60.433 61.111 0.00 0.00 44.45 5.36
3012 3663 2.741517 CACTTCACACAATCATACCGCA 59.258 45.455 0.00 0.00 0.00 5.69
3095 3750 1.699930 ACTTCCACACCCAACCCCT 60.700 57.895 0.00 0.00 0.00 4.79
3099 3754 4.929819 AATTAACACTTCCACACCCAAC 57.070 40.909 0.00 0.00 0.00 3.77
3124 3779 5.007724 CACCTTCTTCAACACAAGACCTAAC 59.992 44.000 0.00 0.00 31.88 2.34
3144 3799 2.192263 GAAGGATCCAGAAGGTCACCT 58.808 52.381 15.82 0.00 35.56 4.00
3145 3800 2.192263 AGAAGGATCCAGAAGGTCACC 58.808 52.381 15.82 0.00 35.89 4.02
3146 3801 3.517500 AGAAGAAGGATCCAGAAGGTCAC 59.482 47.826 15.82 0.00 35.89 3.67
3147 3802 3.517100 CAGAAGAAGGATCCAGAAGGTCA 59.483 47.826 15.82 0.00 35.89 4.02
3148 3803 3.517500 ACAGAAGAAGGATCCAGAAGGTC 59.482 47.826 15.82 3.38 35.89 3.85
3149 3804 3.525862 ACAGAAGAAGGATCCAGAAGGT 58.474 45.455 15.82 0.00 35.89 3.50
3150 3805 4.512484 GAACAGAAGAAGGATCCAGAAGG 58.488 47.826 15.82 0.00 0.00 3.46
3151 3806 4.019860 TGGAACAGAAGAAGGATCCAGAAG 60.020 45.833 15.82 0.00 33.30 2.85
3152 3807 3.909995 TGGAACAGAAGAAGGATCCAGAA 59.090 43.478 15.82 0.00 33.30 3.02
3153 3808 3.520696 TGGAACAGAAGAAGGATCCAGA 58.479 45.455 15.82 0.00 33.30 3.86
3154 3809 3.988976 TGGAACAGAAGAAGGATCCAG 57.011 47.619 15.82 0.00 33.30 3.86
3155 3810 4.722526 TTTGGAACAGAAGAAGGATCCA 57.277 40.909 15.82 0.00 42.39 3.41
3178 3833 6.128117 CCACTGTACTACACACACAACTTTTT 60.128 38.462 0.00 0.00 32.33 1.94
3179 3834 5.353123 CCACTGTACTACACACACAACTTTT 59.647 40.000 0.00 0.00 32.33 2.27
3180 3835 4.873827 CCACTGTACTACACACACAACTTT 59.126 41.667 0.00 0.00 32.33 2.66
3184 3839 3.702548 AGACCACTGTACTACACACACAA 59.297 43.478 0.00 0.00 32.33 3.33
3226 3881 5.880901 AGGAACCTCACACATGACTAATTT 58.119 37.500 0.00 0.00 0.00 1.82
3233 3888 0.984230 GGGAGGAACCTCACACATGA 59.016 55.000 20.39 0.00 45.31 3.07
3259 3914 2.752354 CAAATGTTCCATAGGCGAACCA 59.248 45.455 6.37 0.00 39.10 3.67
3261 3916 2.752903 ACCAAATGTTCCATAGGCGAAC 59.247 45.455 0.00 0.00 40.06 3.95
3262 3917 3.080300 ACCAAATGTTCCATAGGCGAA 57.920 42.857 0.00 0.00 0.00 4.70
3264 3919 2.491693 ACAACCAAATGTTCCATAGGCG 59.508 45.455 0.00 0.00 34.00 5.52
3265 3920 4.705023 ACTACAACCAAATGTTCCATAGGC 59.295 41.667 0.00 0.00 34.00 3.93
3266 3921 7.931578 TTACTACAACCAAATGTTCCATAGG 57.068 36.000 0.00 0.00 34.00 2.57
3282 3938 7.973388 GCATGGCAACTTCAATATTTACTACAA 59.027 33.333 0.00 0.00 37.61 2.41
3298 3954 3.684908 TGTATACAACAGCATGGCAACT 58.315 40.909 2.20 0.00 43.62 3.16
3333 3989 4.082136 GGGACAAAACCAACTTTACACACA 60.082 41.667 0.00 0.00 0.00 3.72
3354 4032 8.408601 CCATAACTTTCTTATTGTTCAGATGGG 58.591 37.037 0.00 0.00 30.07 4.00
3364 4042 8.522830 ACCATCACAACCATAACTTTCTTATTG 58.477 33.333 0.00 0.00 0.00 1.90
3393 4071 2.036992 GCACAGAGGATGGGAGATACAG 59.963 54.545 0.00 0.00 32.10 2.74
3414 4092 4.392940 CAGGATAAAATCACTAGCCCTGG 58.607 47.826 0.00 0.00 37.02 4.45
3468 4149 1.339824 ACATTCAGCCTCTGCCTTGAG 60.340 52.381 0.00 0.00 38.69 3.02
3469 4150 0.694771 ACATTCAGCCTCTGCCTTGA 59.305 50.000 0.00 0.00 38.69 3.02
3515 4196 8.557450 AGTAATTTGGAACACAGGGAGTATAAT 58.443 33.333 0.00 0.00 39.29 1.28
3516 4197 7.924541 AGTAATTTGGAACACAGGGAGTATAA 58.075 34.615 0.00 0.00 39.29 0.98
3521 4202 4.827284 ACAAGTAATTTGGAACACAGGGAG 59.173 41.667 0.00 0.00 41.25 4.30
3522 4203 4.798882 ACAAGTAATTTGGAACACAGGGA 58.201 39.130 0.00 0.00 41.25 4.20
3523 4204 4.320202 CGACAAGTAATTTGGAACACAGGG 60.320 45.833 0.00 0.00 41.25 4.45
3524 4205 4.274950 ACGACAAGTAATTTGGAACACAGG 59.725 41.667 0.00 0.00 41.25 4.00
3525 4206 5.204833 CACGACAAGTAATTTGGAACACAG 58.795 41.667 0.00 0.00 41.25 3.66
3526 4207 4.035792 CCACGACAAGTAATTTGGAACACA 59.964 41.667 0.00 0.00 41.25 3.72
3527 4208 4.035909 ACCACGACAAGTAATTTGGAACAC 59.964 41.667 0.00 0.00 41.25 3.32
3528 4209 4.200874 ACCACGACAAGTAATTTGGAACA 58.799 39.130 0.00 0.00 41.25 3.18
3529 4210 4.823790 ACCACGACAAGTAATTTGGAAC 57.176 40.909 0.00 0.00 41.25 3.62
3530 4211 5.838531 AAACCACGACAAGTAATTTGGAA 57.161 34.783 0.00 0.00 41.25 3.53
3531 4212 5.838531 AAAACCACGACAAGTAATTTGGA 57.161 34.783 0.00 0.00 41.25 3.53
3532 4213 6.731164 ACTAAAACCACGACAAGTAATTTGG 58.269 36.000 0.00 0.00 41.25 3.28
3533 4214 7.111041 CGAACTAAAACCACGACAAGTAATTTG 59.889 37.037 0.00 0.00 42.68 2.32
3534 4215 7.011295 TCGAACTAAAACCACGACAAGTAATTT 59.989 33.333 0.00 0.00 0.00 1.82
3535 4216 6.479660 TCGAACTAAAACCACGACAAGTAATT 59.520 34.615 0.00 0.00 0.00 1.40
3536 4217 5.984926 TCGAACTAAAACCACGACAAGTAAT 59.015 36.000 0.00 0.00 0.00 1.89
3537 4218 5.347342 TCGAACTAAAACCACGACAAGTAA 58.653 37.500 0.00 0.00 0.00 2.24
3538 4219 4.930963 TCGAACTAAAACCACGACAAGTA 58.069 39.130 0.00 0.00 0.00 2.24
3539 4220 3.784338 TCGAACTAAAACCACGACAAGT 58.216 40.909 0.00 0.00 0.00 3.16
3540 4221 3.800506 ACTCGAACTAAAACCACGACAAG 59.199 43.478 0.00 0.00 0.00 3.16
3541 4222 3.784338 ACTCGAACTAAAACCACGACAA 58.216 40.909 0.00 0.00 0.00 3.18
3542 4223 3.441496 ACTCGAACTAAAACCACGACA 57.559 42.857 0.00 0.00 0.00 4.35
3543 4224 3.183172 GGAACTCGAACTAAAACCACGAC 59.817 47.826 0.00 0.00 0.00 4.34
3544 4225 3.181477 TGGAACTCGAACTAAAACCACGA 60.181 43.478 0.00 0.00 0.00 4.35
3545 4226 3.125316 TGGAACTCGAACTAAAACCACG 58.875 45.455 0.00 0.00 0.00 4.94
3546 4227 5.488645 TTTGGAACTCGAACTAAAACCAC 57.511 39.130 0.00 0.00 0.00 4.16
3547 4228 6.702716 AATTTGGAACTCGAACTAAAACCA 57.297 33.333 0.00 0.00 0.00 3.67
3548 4229 7.868775 AGTAATTTGGAACTCGAACTAAAACC 58.131 34.615 0.00 0.00 0.00 3.27
3549 4230 9.166126 CAAGTAATTTGGAACTCGAACTAAAAC 57.834 33.333 0.00 0.00 32.95 2.43
3550 4231 8.895737 ACAAGTAATTTGGAACTCGAACTAAAA 58.104 29.630 0.00 0.00 41.25 1.52
3551 4232 8.441312 ACAAGTAATTTGGAACTCGAACTAAA 57.559 30.769 0.00 0.00 41.25 1.85
3552 4233 7.095940 CGACAAGTAATTTGGAACTCGAACTAA 60.096 37.037 0.00 0.00 41.25 2.24
3553 4234 6.364165 CGACAAGTAATTTGGAACTCGAACTA 59.636 38.462 0.00 0.00 41.25 2.24
3554 4235 5.176958 CGACAAGTAATTTGGAACTCGAACT 59.823 40.000 0.00 0.00 41.25 3.01
3555 4236 5.050567 ACGACAAGTAATTTGGAACTCGAAC 60.051 40.000 0.00 0.00 41.25 3.95
3556 4237 5.050634 CACGACAAGTAATTTGGAACTCGAA 60.051 40.000 0.00 0.00 41.25 3.71
3557 4238 4.446385 CACGACAAGTAATTTGGAACTCGA 59.554 41.667 0.00 0.00 41.25 4.04
3558 4239 4.377022 CCACGACAAGTAATTTGGAACTCG 60.377 45.833 0.00 0.00 41.25 4.18
3559 4240 4.514066 ACCACGACAAGTAATTTGGAACTC 59.486 41.667 0.00 0.00 41.25 3.01
3560 4241 4.457466 ACCACGACAAGTAATTTGGAACT 58.543 39.130 0.00 0.00 41.25 3.01
3561 4242 4.823790 ACCACGACAAGTAATTTGGAAC 57.176 40.909 0.00 0.00 41.25 3.62
3562 4243 5.838531 AAACCACGACAAGTAATTTGGAA 57.161 34.783 0.00 0.00 41.25 3.53
3563 4244 5.838531 AAAACCACGACAAGTAATTTGGA 57.161 34.783 0.00 0.00 41.25 3.53
3564 4245 6.731164 ACTAAAACCACGACAAGTAATTTGG 58.269 36.000 0.00 0.00 41.25 3.28
3565 4246 7.911205 TGAACTAAAACCACGACAAGTAATTTG 59.089 33.333 0.00 0.00 42.68 2.32
3566 4247 7.987649 TGAACTAAAACCACGACAAGTAATTT 58.012 30.769 0.00 0.00 0.00 1.82
3567 4248 7.556733 TGAACTAAAACCACGACAAGTAATT 57.443 32.000 0.00 0.00 0.00 1.40
3568 4249 7.556733 TTGAACTAAAACCACGACAAGTAAT 57.443 32.000 0.00 0.00 0.00 1.89
3569 4250 6.981762 TTGAACTAAAACCACGACAAGTAA 57.018 33.333 0.00 0.00 0.00 2.24
3570 4251 6.981762 TTTGAACTAAAACCACGACAAGTA 57.018 33.333 0.00 0.00 0.00 2.24
3571 4252 5.883503 TTTGAACTAAAACCACGACAAGT 57.116 34.783 0.00 0.00 0.00 3.16
3572 4253 7.486551 TCAAATTTGAACTAAAACCACGACAAG 59.513 33.333 18.45 0.00 33.55 3.16
3573 4254 7.313646 TCAAATTTGAACTAAAACCACGACAA 58.686 30.769 18.45 0.00 33.55 3.18
3574 4255 6.853720 TCAAATTTGAACTAAAACCACGACA 58.146 32.000 18.45 0.00 33.55 4.35
3575 4256 7.743520 TTCAAATTTGAACTAAAACCACGAC 57.256 32.000 26.01 0.00 41.88 4.34
3588 4269 9.658799 TTGTCATGGTTTTAGTTCAAATTTGAA 57.341 25.926 26.01 26.01 44.31 2.69
3589 4270 9.311916 CTTGTCATGGTTTTAGTTCAAATTTGA 57.688 29.630 16.91 16.91 34.92 2.69
3590 4271 9.097257 ACTTGTCATGGTTTTAGTTCAAATTTG 57.903 29.630 12.15 12.15 0.00 2.32
3596 4277 9.743057 CAAATTACTTGTCATGGTTTTAGTTCA 57.257 29.630 0.00 0.00 0.00 3.18
3597 4278 9.191995 CCAAATTACTTGTCATGGTTTTAGTTC 57.808 33.333 0.00 0.00 32.65 3.01
3598 4279 8.919145 TCCAAATTACTTGTCATGGTTTTAGTT 58.081 29.630 0.00 0.00 32.65 2.24
3599 4280 8.472007 TCCAAATTACTTGTCATGGTTTTAGT 57.528 30.769 0.00 0.00 32.65 2.24
3600 4281 9.191995 GTTCCAAATTACTTGTCATGGTTTTAG 57.808 33.333 0.00 0.00 32.65 1.85
3601 4282 7.863375 CGTTCCAAATTACTTGTCATGGTTTTA 59.137 33.333 0.00 0.00 32.65 1.52
3602 4283 6.699642 CGTTCCAAATTACTTGTCATGGTTTT 59.300 34.615 0.00 0.00 32.65 2.43
3603 4284 6.212955 CGTTCCAAATTACTTGTCATGGTTT 58.787 36.000 0.00 0.00 32.65 3.27
3604 4285 5.278758 CCGTTCCAAATTACTTGTCATGGTT 60.279 40.000 0.00 0.00 32.65 3.67
3605 4286 4.217550 CCGTTCCAAATTACTTGTCATGGT 59.782 41.667 0.00 0.00 32.65 3.55
3606 4287 4.457603 TCCGTTCCAAATTACTTGTCATGG 59.542 41.667 0.00 0.00 32.65 3.66
3607 4288 5.391950 CCTCCGTTCCAAATTACTTGTCATG 60.392 44.000 0.00 0.00 32.65 3.07
3608 4289 4.700213 CCTCCGTTCCAAATTACTTGTCAT 59.300 41.667 0.00 0.00 32.65 3.06
3609 4290 4.069304 CCTCCGTTCCAAATTACTTGTCA 58.931 43.478 0.00 0.00 32.65 3.58
3610 4291 3.439129 CCCTCCGTTCCAAATTACTTGTC 59.561 47.826 0.00 0.00 32.65 3.18
3611 4292 3.073356 TCCCTCCGTTCCAAATTACTTGT 59.927 43.478 0.00 0.00 32.65 3.16
3612 4293 3.681593 TCCCTCCGTTCCAAATTACTTG 58.318 45.455 0.00 0.00 34.52 3.16
3613 4294 3.329814 ACTCCCTCCGTTCCAAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
3614 4295 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
3615 4296 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
3616 4297 6.811634 TTATACTCCCTCCGTTCCAAATTA 57.188 37.500 0.00 0.00 0.00 1.40
3617 4298 5.703730 TTATACTCCCTCCGTTCCAAATT 57.296 39.130 0.00 0.00 0.00 1.82
3618 4299 5.703730 TTTATACTCCCTCCGTTCCAAAT 57.296 39.130 0.00 0.00 0.00 2.32
3619 4300 5.248934 TCTTTTATACTCCCTCCGTTCCAAA 59.751 40.000 0.00 0.00 0.00 3.28
3620 4301 4.778958 TCTTTTATACTCCCTCCGTTCCAA 59.221 41.667 0.00 0.00 0.00 3.53
3621 4302 4.355549 TCTTTTATACTCCCTCCGTTCCA 58.644 43.478 0.00 0.00 0.00 3.53
3622 4303 5.349061 TTCTTTTATACTCCCTCCGTTCC 57.651 43.478 0.00 0.00 0.00 3.62
3649 4330 9.453572 AAAACATGTACATCTACACATCTCAAT 57.546 29.630 5.07 0.00 35.63 2.57
3650 4331 8.846943 AAAACATGTACATCTACACATCTCAA 57.153 30.769 5.07 0.00 35.63 3.02
3651 4332 8.846943 AAAAACATGTACATCTACACATCTCA 57.153 30.769 5.07 0.00 35.63 3.27
3695 4376 8.032451 GCTACTTTTGATGTTTAATAAAGGCCA 58.968 33.333 5.01 0.00 31.74 5.36
3696 4377 8.251026 AGCTACTTTTGATGTTTAATAAAGGCC 58.749 33.333 0.00 0.00 31.74 5.19
3697 4378 9.639601 AAGCTACTTTTGATGTTTAATAAAGGC 57.360 29.630 0.00 0.00 31.74 4.35
3700 4381 9.418045 GGCAAGCTACTTTTGATGTTTAATAAA 57.582 29.630 0.00 0.00 0.00 1.40
3701 4382 8.580720 TGGCAAGCTACTTTTGATGTTTAATAA 58.419 29.630 0.00 0.00 0.00 1.40
3702 4383 8.116651 TGGCAAGCTACTTTTGATGTTTAATA 57.883 30.769 0.00 0.00 0.00 0.98
3703 4384 6.991938 TGGCAAGCTACTTTTGATGTTTAAT 58.008 32.000 0.00 0.00 0.00 1.40
3704 4385 6.398234 TGGCAAGCTACTTTTGATGTTTAA 57.602 33.333 0.00 0.00 0.00 1.52
3705 4386 6.183360 TGTTGGCAAGCTACTTTTGATGTTTA 60.183 34.615 0.00 0.00 0.00 2.01
3706 4387 4.935352 TGGCAAGCTACTTTTGATGTTT 57.065 36.364 0.00 0.00 0.00 2.83
3707 4388 4.099266 TGTTGGCAAGCTACTTTTGATGTT 59.901 37.500 0.00 0.00 0.00 2.71
3708 4389 3.636300 TGTTGGCAAGCTACTTTTGATGT 59.364 39.130 0.00 0.00 0.00 3.06
3709 4390 3.983344 GTGTTGGCAAGCTACTTTTGATG 59.017 43.478 0.00 0.00 0.00 3.07
3710 4391 3.304659 CGTGTTGGCAAGCTACTTTTGAT 60.305 43.478 0.00 0.00 0.00 2.57
3711 4392 2.032799 CGTGTTGGCAAGCTACTTTTGA 59.967 45.455 0.00 0.00 0.00 2.69
3712 4393 2.032799 TCGTGTTGGCAAGCTACTTTTG 59.967 45.455 0.00 0.00 0.00 2.44
3713 4394 2.032924 GTCGTGTTGGCAAGCTACTTTT 59.967 45.455 0.00 0.00 0.00 2.27
3714 4395 1.602377 GTCGTGTTGGCAAGCTACTTT 59.398 47.619 0.00 0.00 0.00 2.66
3715 4396 1.202651 AGTCGTGTTGGCAAGCTACTT 60.203 47.619 0.00 0.00 0.00 2.24
3716 4397 0.393077 AGTCGTGTTGGCAAGCTACT 59.607 50.000 0.00 1.62 0.00 2.57
3717 4398 0.512952 CAGTCGTGTTGGCAAGCTAC 59.487 55.000 0.00 0.00 0.00 3.58
3718 4399 0.391228 TCAGTCGTGTTGGCAAGCTA 59.609 50.000 0.00 0.00 0.00 3.32
3719 4400 0.882042 CTCAGTCGTGTTGGCAAGCT 60.882 55.000 0.00 0.00 0.00 3.74
3720 4401 1.571460 CTCAGTCGTGTTGGCAAGC 59.429 57.895 0.00 0.00 0.00 4.01
3721 4402 0.249868 TCCTCAGTCGTGTTGGCAAG 60.250 55.000 0.00 0.00 0.00 4.01
3722 4403 0.396435 ATCCTCAGTCGTGTTGGCAA 59.604 50.000 0.00 0.00 0.00 4.52
3723 4404 0.037326 GATCCTCAGTCGTGTTGGCA 60.037 55.000 0.00 0.00 0.00 4.92
3724 4405 1.078759 CGATCCTCAGTCGTGTTGGC 61.079 60.000 0.00 0.00 34.56 4.52
3725 4406 3.036026 CGATCCTCAGTCGTGTTGG 57.964 57.895 0.00 0.00 34.56 3.77
3731 4412 1.002251 GAGCCTTACGATCCTCAGTCG 60.002 57.143 0.00 0.00 44.26 4.18
3732 4413 2.025155 TGAGCCTTACGATCCTCAGTC 58.975 52.381 0.00 0.00 31.29 3.51
3733 4414 2.145397 TGAGCCTTACGATCCTCAGT 57.855 50.000 0.00 0.00 31.29 3.41
3734 4415 2.363680 ACATGAGCCTTACGATCCTCAG 59.636 50.000 0.00 0.37 37.70 3.35
3735 4416 2.388735 ACATGAGCCTTACGATCCTCA 58.611 47.619 0.00 0.44 38.54 3.86
3736 4417 3.460857 AACATGAGCCTTACGATCCTC 57.539 47.619 0.00 0.00 0.00 3.71
3737 4418 3.914426 AAACATGAGCCTTACGATCCT 57.086 42.857 0.00 0.00 0.00 3.24
3738 4419 3.938963 TGAAAACATGAGCCTTACGATCC 59.061 43.478 0.00 0.00 0.00 3.36
3739 4420 4.494855 GCTGAAAACATGAGCCTTACGATC 60.495 45.833 0.00 0.00 0.00 3.69
3740 4421 3.375299 GCTGAAAACATGAGCCTTACGAT 59.625 43.478 0.00 0.00 0.00 3.73
3741 4422 2.742053 GCTGAAAACATGAGCCTTACGA 59.258 45.455 0.00 0.00 0.00 3.43
3742 4423 2.744202 AGCTGAAAACATGAGCCTTACG 59.256 45.455 0.00 0.00 32.86 3.18
3743 4424 3.753272 TCAGCTGAAAACATGAGCCTTAC 59.247 43.478 15.67 0.00 32.86 2.34
3744 4425 4.019792 TCAGCTGAAAACATGAGCCTTA 57.980 40.909 15.67 0.00 32.86 2.69
3745 4426 2.867624 TCAGCTGAAAACATGAGCCTT 58.132 42.857 15.67 0.00 32.86 4.35
3746 4427 2.574006 TCAGCTGAAAACATGAGCCT 57.426 45.000 15.67 0.00 32.86 4.58
3747 4428 2.670509 GCTTCAGCTGAAAACATGAGCC 60.671 50.000 28.16 8.79 38.21 4.70
3748 4429 2.593257 GCTTCAGCTGAAAACATGAGC 58.407 47.619 28.16 21.85 38.21 4.26
3766 4447 2.617532 CCTCCTCTTGCAAAGCTAAGCT 60.618 50.000 0.00 0.00 45.70 3.74
3767 4448 1.742268 CCTCCTCTTGCAAAGCTAAGC 59.258 52.381 0.00 3.50 45.70 3.09
3768 4449 2.363683 CCCTCCTCTTGCAAAGCTAAG 58.636 52.381 0.00 0.00 45.70 2.18
3769 4450 1.614317 GCCCTCCTCTTGCAAAGCTAA 60.614 52.381 0.00 0.00 45.70 3.09
3770 4451 0.035056 GCCCTCCTCTTGCAAAGCTA 60.035 55.000 0.00 0.00 45.70 3.32
3771 4452 1.303970 GCCCTCCTCTTGCAAAGCT 60.304 57.895 0.00 0.00 45.70 3.74
3772 4453 1.181098 TTGCCCTCCTCTTGCAAAGC 61.181 55.000 0.00 0.00 45.70 3.51
3774 4455 0.478072 TCTTGCCCTCCTCTTGCAAA 59.522 50.000 0.00 0.00 43.69 3.68
3775 4456 0.478072 TTCTTGCCCTCCTCTTGCAA 59.522 50.000 0.00 0.00 42.28 4.08
3776 4457 0.478072 TTTCTTGCCCTCCTCTTGCA 59.522 50.000 0.00 0.00 0.00 4.08
3777 4458 1.172175 CTTTCTTGCCCTCCTCTTGC 58.828 55.000 0.00 0.00 0.00 4.01
3778 4459 1.831580 CCTTTCTTGCCCTCCTCTTG 58.168 55.000 0.00 0.00 0.00 3.02
3779 4460 0.038890 GCCTTTCTTGCCCTCCTCTT 59.961 55.000 0.00 0.00 0.00 2.85
3780 4461 1.136329 TGCCTTTCTTGCCCTCCTCT 61.136 55.000 0.00 0.00 0.00 3.69
3781 4462 0.033699 ATGCCTTTCTTGCCCTCCTC 60.034 55.000 0.00 0.00 0.00 3.71
3782 4463 0.324091 CATGCCTTTCTTGCCCTCCT 60.324 55.000 0.00 0.00 0.00 3.69
3783 4464 0.323725 TCATGCCTTTCTTGCCCTCC 60.324 55.000 0.00 0.00 0.00 4.30
3784 4465 1.680207 GATCATGCCTTTCTTGCCCTC 59.320 52.381 0.00 0.00 0.00 4.30
3785 4466 1.287146 AGATCATGCCTTTCTTGCCCT 59.713 47.619 0.00 0.00 0.00 5.19
3786 4467 1.772836 AGATCATGCCTTTCTTGCCC 58.227 50.000 0.00 0.00 0.00 5.36
3787 4468 3.881937 AAAGATCATGCCTTTCTTGCC 57.118 42.857 0.00 0.00 30.41 4.52
3788 4469 4.179298 GGAAAAGATCATGCCTTTCTTGC 58.821 43.478 11.56 2.35 33.15 4.01
3789 4470 5.184479 TCTGGAAAAGATCATGCCTTTCTTG 59.816 40.000 11.56 5.50 33.15 3.02
3790 4471 5.327732 TCTGGAAAAGATCATGCCTTTCTT 58.672 37.500 11.56 4.49 33.15 2.52
3791 4472 4.927049 TCTGGAAAAGATCATGCCTTTCT 58.073 39.130 11.56 4.93 33.15 2.52
3792 4473 5.848833 ATCTGGAAAAGATCATGCCTTTC 57.151 39.130 11.56 6.70 42.27 2.62
3793 4474 5.626116 GCAATCTGGAAAAGATCATGCCTTT 60.626 40.000 0.00 6.98 45.37 3.11
3794 4475 4.142004 GCAATCTGGAAAAGATCATGCCTT 60.142 41.667 0.00 0.00 45.37 4.35
3795 4476 3.383825 GCAATCTGGAAAAGATCATGCCT 59.616 43.478 0.00 0.00 45.37 4.75
3796 4477 3.714391 GCAATCTGGAAAAGATCATGCC 58.286 45.455 0.00 0.00 45.37 4.40
3797 4478 3.383825 AGGCAATCTGGAAAAGATCATGC 59.616 43.478 0.00 4.23 45.37 4.06
3798 4479 4.736759 GCAGGCAATCTGGAAAAGATCATG 60.737 45.833 0.00 0.00 45.37 3.07
3799 4480 3.383825 GCAGGCAATCTGGAAAAGATCAT 59.616 43.478 0.00 0.00 45.37 2.45
3800 4481 2.756760 GCAGGCAATCTGGAAAAGATCA 59.243 45.455 0.00 0.00 45.37 2.92
3801 4482 2.756760 TGCAGGCAATCTGGAAAAGATC 59.243 45.455 0.00 0.00 45.37 2.75
3802 4483 3.371965 ATGCAGGCAATCTGGAAAAGAT 58.628 40.909 0.00 0.00 46.76 2.40
3803 4484 2.291209 TGCAGGCAATCTGGAAAAGA 57.709 45.000 0.00 0.00 40.95 2.52
3804 4485 3.604875 AATGCAGGCAATCTGGAAAAG 57.395 42.857 0.00 0.00 46.76 2.27
3805 4486 4.040706 AGAAAATGCAGGCAATCTGGAAAA 59.959 37.500 0.00 0.00 46.76 2.29
3806 4487 3.579586 AGAAAATGCAGGCAATCTGGAAA 59.420 39.130 0.00 0.00 46.76 3.13
3807 4488 3.167485 AGAAAATGCAGGCAATCTGGAA 58.833 40.909 0.00 0.00 46.76 3.53
3809 4490 2.758979 AGAGAAAATGCAGGCAATCTGG 59.241 45.455 10.89 0.00 43.54 3.86
3810 4491 4.174009 CAAGAGAAAATGCAGGCAATCTG 58.826 43.478 10.89 0.00 46.03 2.90
3811 4492 3.830755 ACAAGAGAAAATGCAGGCAATCT 59.169 39.130 0.00 2.76 0.00 2.40
3812 4493 3.924686 CACAAGAGAAAATGCAGGCAATC 59.075 43.478 0.00 0.00 0.00 2.67
3813 4494 3.322828 ACACAAGAGAAAATGCAGGCAAT 59.677 39.130 0.00 0.00 0.00 3.56
3814 4495 2.694628 ACACAAGAGAAAATGCAGGCAA 59.305 40.909 0.00 0.00 0.00 4.52
3815 4496 2.309613 ACACAAGAGAAAATGCAGGCA 58.690 42.857 0.00 0.00 0.00 4.75
3816 4497 3.054878 CAACACAAGAGAAAATGCAGGC 58.945 45.455 0.00 0.00 0.00 4.85
3817 4498 4.311816 ACAACACAAGAGAAAATGCAGG 57.688 40.909 0.00 0.00 0.00 4.85
3818 4499 7.365741 AGAATACAACACAAGAGAAAATGCAG 58.634 34.615 0.00 0.00 0.00 4.41
3819 4500 7.229306 AGAGAATACAACACAAGAGAAAATGCA 59.771 33.333 0.00 0.00 0.00 3.96
3820 4501 7.588512 AGAGAATACAACACAAGAGAAAATGC 58.411 34.615 0.00 0.00 0.00 3.56
3821 4502 8.233190 GGAGAGAATACAACACAAGAGAAAATG 58.767 37.037 0.00 0.00 0.00 2.32
3822 4503 7.391833 GGGAGAGAATACAACACAAGAGAAAAT 59.608 37.037 0.00 0.00 0.00 1.82
3823 4504 6.710744 GGGAGAGAATACAACACAAGAGAAAA 59.289 38.462 0.00 0.00 0.00 2.29
3824 4505 6.231211 GGGAGAGAATACAACACAAGAGAAA 58.769 40.000 0.00 0.00 0.00 2.52
3825 4506 5.280011 GGGGAGAGAATACAACACAAGAGAA 60.280 44.000 0.00 0.00 0.00 2.87
3826 4507 4.223032 GGGGAGAGAATACAACACAAGAGA 59.777 45.833 0.00 0.00 0.00 3.10
3827 4508 4.508662 GGGGAGAGAATACAACACAAGAG 58.491 47.826 0.00 0.00 0.00 2.85
3828 4509 3.263425 GGGGGAGAGAATACAACACAAGA 59.737 47.826 0.00 0.00 0.00 3.02
3829 4510 3.610911 GGGGGAGAGAATACAACACAAG 58.389 50.000 0.00 0.00 0.00 3.16
3830 4511 3.713826 GGGGGAGAGAATACAACACAA 57.286 47.619 0.00 0.00 0.00 3.33
3847 4528 4.796606 ACATCTCATATTTGTGAAGGGGG 58.203 43.478 0.00 0.00 0.00 5.40
3848 4529 6.125029 AGAACATCTCATATTTGTGAAGGGG 58.875 40.000 0.00 0.00 0.00 4.79
3849 4530 8.616076 GTTAGAACATCTCATATTTGTGAAGGG 58.384 37.037 0.00 0.00 0.00 3.95
3850 4531 9.388506 AGTTAGAACATCTCATATTTGTGAAGG 57.611 33.333 0.00 0.00 0.00 3.46
3879 4560 9.425577 TGTGTCTATATACGTTTGATTCACAAA 57.574 29.630 0.00 0.00 44.79 2.83
3880 4561 8.989653 TGTGTCTATATACGTTTGATTCACAA 57.010 30.769 0.00 0.00 36.65 3.33
3890 4571 9.678941 CACACTCAATATGTGTCTATATACGTT 57.321 33.333 0.00 0.00 45.56 3.99


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.