Multiple sequence alignment - TraesCS7D01G373700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G373700 chr7D 100.000 4210 0 0 1 4210 484073824 484069615 0.000000e+00 7775.0
1 TraesCS7D01G373700 chr7D 86.405 1530 187 11 44 1562 489312729 489311210 0.000000e+00 1653.0
2 TraesCS7D01G373700 chr7D 89.182 1100 91 6 1987 3059 489302131 489301033 0.000000e+00 1347.0
3 TraesCS7D01G373700 chr7D 88.957 489 49 5 3056 3543 489300943 489300459 2.170000e-167 599.0
4 TraesCS7D01G373700 chr7D 93.316 374 14 8 3747 4110 529491881 529491509 3.700000e-150 542.0
5 TraesCS7D01G373700 chr7D 88.140 430 47 3 1564 1993 489311125 489310700 3.760000e-140 508.0
6 TraesCS7D01G373700 chr7D 87.727 440 45 4 2178 2616 535510977 535511408 4.860000e-139 505.0
7 TraesCS7D01G373700 chr7A 93.493 2997 151 14 2 2980 551544805 551541835 0.000000e+00 4414.0
8 TraesCS7D01G373700 chr7A 79.973 1463 194 46 1652 3055 591023617 591025039 0.000000e+00 987.0
9 TraesCS7D01G373700 chr7A 94.494 563 28 2 2981 3543 551541891 551541332 0.000000e+00 865.0
10 TraesCS7D01G373700 chr7A 83.300 497 69 11 3056 3543 616443003 616442512 2.990000e-121 446.0
11 TraesCS7D01G373700 chr7A 78.212 716 135 18 866 1570 616445133 616444428 5.000000e-119 438.0
12 TraesCS7D01G373700 chr7A 82.510 486 71 10 3056 3532 615786842 615787322 8.420000e-112 414.0
13 TraesCS7D01G373700 chr7A 76.891 714 139 22 866 1565 615784711 615785412 8.540000e-102 381.0
14 TraesCS7D01G373700 chr7A 82.670 427 59 7 13 428 551544469 551544047 8.600000e-97 364.0
15 TraesCS7D01G373700 chr7A 85.953 299 37 5 42 339 551545169 551544875 8.790000e-82 315.0
16 TraesCS7D01G373700 chr7A 91.406 128 10 1 3620 3747 551541331 551541205 1.560000e-39 174.0
17 TraesCS7D01G373700 chr7B 88.514 1541 132 14 1548 3059 517933989 517932465 0.000000e+00 1823.0
18 TraesCS7D01G373700 chr7B 84.872 1527 209 13 49 1562 517935579 517934062 0.000000e+00 1520.0
19 TraesCS7D01G373700 chr7B 83.301 1545 211 24 44 1562 509738865 509737342 0.000000e+00 1380.0
20 TraesCS7D01G373700 chr7B 89.787 891 84 3 2177 3066 509736624 509735740 0.000000e+00 1134.0
21 TraesCS7D01G373700 chr7B 84.984 626 81 7 1564 2186 509737259 509736644 1.290000e-174 623.0
22 TraesCS7D01G373700 chr7B 81.389 763 121 19 28 784 517935941 517935194 1.670000e-168 603.0
23 TraesCS7D01G373700 chr7B 88.367 490 51 6 3056 3543 517932375 517931890 6.070000e-163 584.0
24 TraesCS7D01G373700 chr7B 87.727 440 46 6 2178 2616 577201552 577201984 1.350000e-139 507.0
25 TraesCS7D01G373700 chr7B 85.366 492 57 9 3056 3543 509735660 509735180 2.920000e-136 496.0
26 TraesCS7D01G373700 chr7B 86.856 388 37 8 3747 4126 22683789 22684170 5.030000e-114 422.0
27 TraesCS7D01G373700 chr7B 83.900 441 55 9 13 441 509738539 509738103 1.410000e-109 407.0
28 TraesCS7D01G373700 chr7B 88.542 96 9 2 3620 3714 509735181 509735087 9.570000e-22 115.0
29 TraesCS7D01G373700 chr7B 94.643 56 1 1 3580 3635 273301189 273301136 7.500000e-13 86.1
30 TraesCS7D01G373700 chr7B 92.857 56 2 1 3580 3635 181125044 181125097 3.490000e-11 80.5
31 TraesCS7D01G373700 chr7B 100.000 30 0 0 9 38 517935607 517935578 5.880000e-04 56.5
32 TraesCS7D01G373700 chr6B 84.183 1157 126 25 1955 3059 649832880 649831729 0.000000e+00 1070.0
33 TraesCS7D01G373700 chr6B 80.645 372 66 6 471 837 121434368 121433998 2.480000e-72 283.0
34 TraesCS7D01G373700 chr6B 76.673 523 107 13 1043 1562 649740916 649740406 4.150000e-70 276.0
35 TraesCS7D01G373700 chr6B 83.755 277 37 5 404 672 649057529 649057253 5.400000e-64 255.0
36 TraesCS7D01G373700 chr6B 91.228 57 5 0 2924 2980 121959339 121959283 1.250000e-10 78.7
37 TraesCS7D01G373700 chr6B 91.228 57 5 0 2924 2980 122185891 122185835 1.250000e-10 78.7
38 TraesCS7D01G373700 chr6B 88.333 60 4 1 2924 2980 121431948 121431889 7.550000e-08 69.4
39 TraesCS7D01G373700 chr6D 80.701 1399 191 48 1702 3066 50179282 50180635 0.000000e+00 1014.0
40 TraesCS7D01G373700 chr6D 86.499 874 93 14 2218 3066 430845630 430844757 0.000000e+00 937.0
41 TraesCS7D01G373700 chr6D 90.746 389 24 7 3748 4126 304113288 304112902 3.760000e-140 508.0
42 TraesCS7D01G373700 chr6D 88.579 394 21 10 3750 4126 445156776 445156390 1.380000e-124 457.0
43 TraesCS7D01G373700 chr6D 82.828 495 67 14 3056 3543 430750928 430750445 1.080000e-115 427.0
44 TraesCS7D01G373700 chr6D 82.620 374 61 4 468 837 50178119 50178492 1.130000e-85 327.0
45 TraesCS7D01G373700 chr6D 86.039 308 35 5 23 324 457258239 457257934 1.460000e-84 324.0
46 TraesCS7D01G373700 chr6D 80.092 437 66 14 252 672 457258365 457257934 5.290000e-79 305.0
47 TraesCS7D01G373700 chr6D 81.432 377 60 9 1651 2020 50604555 50604928 2.460000e-77 300.0
48 TraesCS7D01G373700 chr6D 83.394 277 38 5 404 672 430681526 430681250 2.510000e-62 250.0
49 TraesCS7D01G373700 chr6D 79.630 270 44 10 1294 1562 430751828 430751569 2.590000e-42 183.0
50 TraesCS7D01G373700 chr6D 87.931 58 4 1 2926 2980 50180549 50180606 9.770000e-07 65.8
51 TraesCS7D01G373700 chr2D 84.949 691 69 9 1952 2615 89468729 89469411 0.000000e+00 667.0
52 TraesCS7D01G373700 chr1D 88.550 393 30 11 3747 4126 204267194 204266804 2.970000e-126 462.0
53 TraesCS7D01G373700 chr1D 87.147 389 37 10 3748 4126 245941182 245940797 3.010000e-116 429.0
54 TraesCS7D01G373700 chr1D 85.316 395 34 15 3745 4126 432330561 432330944 1.840000e-103 387.0
55 TraesCS7D01G373700 chr3D 87.887 388 36 6 3748 4126 446876573 446876188 2.990000e-121 446.0
56 TraesCS7D01G373700 chrUn 83.299 491 73 6 3056 3543 277362226 277362710 1.070000e-120 444.0
57 TraesCS7D01G373700 chrUn 81.267 363 61 7 1654 2010 373933517 373933156 1.920000e-73 287.0
58 TraesCS7D01G373700 chr6A 83.096 491 74 6 3056 3543 64678718 64678234 5.000000e-119 438.0
59 TraesCS7D01G373700 chr6A 82.438 484 73 8 1702 2179 64908965 64908488 3.030000e-111 412.0
60 TraesCS7D01G373700 chr6A 86.184 304 34 5 27 324 604194490 604194189 5.250000e-84 322.0
61 TraesCS7D01G373700 chr6A 81.402 371 65 4 471 837 64910078 64909708 2.460000e-77 300.0
62 TraesCS7D01G373700 chr6A 80.992 363 62 7 1654 2010 64680172 64679811 8.910000e-72 281.0
63 TraesCS7D01G373700 chr6A 83.453 278 36 7 404 672 577706011 577705735 2.510000e-62 250.0
64 TraesCS7D01G373700 chr6A 89.231 65 6 1 366 429 577725632 577725568 3.490000e-11 80.5
65 TraesCS7D01G373700 chr6A 89.231 65 6 1 366 429 577726577 577726513 3.490000e-11 80.5
66 TraesCS7D01G373700 chr5A 83.590 390 46 9 3748 4126 595915927 595916309 2.410000e-92 350.0
67 TraesCS7D01G373700 chr5A 86.513 304 33 5 27 324 531399757 531400058 1.130000e-85 327.0
68 TraesCS7D01G373700 chr3B 94.643 56 1 1 3580 3635 26935859 26935806 7.500000e-13 86.1
69 TraesCS7D01G373700 chr3B 94.643 56 1 1 3580 3635 587395506 587395559 7.500000e-13 86.1
70 TraesCS7D01G373700 chr3B 94.643 56 1 1 3580 3635 737740005 737740058 7.500000e-13 86.1
71 TraesCS7D01G373700 chr3B 94.444 54 1 1 3582 3635 735839616 735839565 9.700000e-12 82.4
72 TraesCS7D01G373700 chr3B 90.164 61 4 2 3579 3639 826362693 826362751 1.250000e-10 78.7
73 TraesCS7D01G373700 chr2B 94.643 56 1 1 3580 3635 120862232 120862285 7.500000e-13 86.1
74 TraesCS7D01G373700 chr2B 94.643 56 1 1 3580 3635 559493515 559493568 7.500000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G373700 chr7D 484069615 484073824 4209 True 7775.000000 7775 100.000000 1 4210 1 chr7D.!!$R1 4209
1 TraesCS7D01G373700 chr7D 489310700 489312729 2029 True 1080.500000 1653 87.272500 44 1993 2 chr7D.!!$R4 1949
2 TraesCS7D01G373700 chr7D 489300459 489302131 1672 True 973.000000 1347 89.069500 1987 3543 2 chr7D.!!$R3 1556
3 TraesCS7D01G373700 chr7A 551541205 551545169 3964 True 1226.400000 4414 89.603200 2 3747 5 chr7A.!!$R1 3745
4 TraesCS7D01G373700 chr7A 591023617 591025039 1422 False 987.000000 987 79.973000 1652 3055 1 chr7A.!!$F1 1403
5 TraesCS7D01G373700 chr7A 616442512 616445133 2621 True 442.000000 446 80.756000 866 3543 2 chr7A.!!$R2 2677
6 TraesCS7D01G373700 chr7A 615784711 615787322 2611 False 397.500000 414 79.700500 866 3532 2 chr7A.!!$F2 2666
7 TraesCS7D01G373700 chr7B 517931890 517935941 4051 True 917.300000 1823 88.628400 9 3543 5 chr7B.!!$R3 3534
8 TraesCS7D01G373700 chr7B 509735087 509738865 3778 True 692.500000 1380 85.980000 13 3714 6 chr7B.!!$R2 3701
9 TraesCS7D01G373700 chr6B 649831729 649832880 1151 True 1070.000000 1070 84.183000 1955 3059 1 chr6B.!!$R5 1104
10 TraesCS7D01G373700 chr6B 649740406 649740916 510 True 276.000000 276 76.673000 1043 1562 1 chr6B.!!$R4 519
11 TraesCS7D01G373700 chr6D 430844757 430845630 873 True 937.000000 937 86.499000 2218 3066 1 chr6D.!!$R3 848
12 TraesCS7D01G373700 chr6D 50178119 50180635 2516 False 468.933333 1014 83.750667 468 3066 3 chr6D.!!$F2 2598
13 TraesCS7D01G373700 chr6D 430750445 430751828 1383 True 305.000000 427 81.229000 1294 3543 2 chr6D.!!$R5 2249
14 TraesCS7D01G373700 chr2D 89468729 89469411 682 False 667.000000 667 84.949000 1952 2615 1 chr2D.!!$F1 663
15 TraesCS7D01G373700 chr6A 64678234 64680172 1938 True 359.500000 438 82.044000 1654 3543 2 chr6A.!!$R3 1889
16 TraesCS7D01G373700 chr6A 64908488 64910078 1590 True 356.000000 412 81.920000 471 2179 2 chr6A.!!$R4 1708

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
459 861 4.284178 AGCCATGAGTTATTTGCAGGATT 58.716 39.13 0.0 0.0 0.00 3.01 F
1379 1837 0.741915 GATGACGAGGAGGAGGTCAC 59.258 60.00 0.0 0.0 42.83 3.67 F
1949 2577 2.045561 TTCTCCGTTTTGCTTGGTGA 57.954 45.00 0.0 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1661 2281 0.328258 AACGCCTCCCAAACATAGCT 59.672 50.000 0.00 0.0 0.0 3.32 R
2648 3368 1.004918 GTAGGTTCCTGTGCTGCGT 60.005 57.895 1.12 0.0 0.0 5.24 R
3922 4873 0.105246 TGGGGTGACATTTGGCCTTT 60.105 50.000 3.32 0.0 0.0 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 416 9.751542 GAGAGTGCACAACATTAGTAATATAGT 57.248 33.333 21.04 0.00 0.00 2.12
38 417 9.751542 AGAGTGCACAACATTAGTAATATAGTC 57.248 33.333 21.04 0.60 0.00 2.59
39 418 9.529325 GAGTGCACAACATTAGTAATATAGTCA 57.471 33.333 21.04 0.00 0.00 3.41
40 419 9.314321 AGTGCACAACATTAGTAATATAGTCAC 57.686 33.333 21.04 1.28 0.00 3.67
41 420 9.093970 GTGCACAACATTAGTAATATAGTCACA 57.906 33.333 13.17 0.00 0.00 3.58
42 421 9.093970 TGCACAACATTAGTAATATAGTCACAC 57.906 33.333 0.00 0.00 0.00 3.82
43 422 9.314321 GCACAACATTAGTAATATAGTCACACT 57.686 33.333 0.00 0.00 0.00 3.55
290 682 8.566260 GCTATGAGTGATTTGCAAAGATCTTAT 58.434 33.333 18.19 16.65 0.00 1.73
459 861 4.284178 AGCCATGAGTTATTTGCAGGATT 58.716 39.130 0.00 0.00 0.00 3.01
633 1037 6.176183 ACTAGCTATGAGTGATTTGCAAAGT 58.824 36.000 18.19 5.95 0.00 2.66
743 1147 9.767228 AGAGTATATGACAGTAGTAGTACAGTG 57.233 37.037 10.22 3.39 29.52 3.66
827 1242 5.552178 AGAAAGTCAAAGTACACCCATCTC 58.448 41.667 0.00 0.00 0.00 2.75
943 1394 4.386951 CGTGGTCCCCATCGCACA 62.387 66.667 0.00 0.00 35.28 4.57
1139 1596 3.591254 AACTTGAGGACGCCGAGGC 62.591 63.158 3.59 3.59 37.85 4.70
1168 1625 4.467084 GGCGGAAGGTGATGGCGA 62.467 66.667 0.00 0.00 0.00 5.54
1284 1742 2.405172 GACAACGAGGAGGACTTTGAC 58.595 52.381 0.00 0.00 0.00 3.18
1327 1785 1.155390 AACTCCAGGGACTCCGACA 59.845 57.895 0.00 0.00 34.60 4.35
1379 1837 0.741915 GATGACGAGGAGGAGGTCAC 59.258 60.000 0.00 0.00 42.83 3.67
1407 1868 2.941616 GCCCTTTGCCGCCATCAAA 61.942 57.895 0.00 0.00 33.04 2.69
1455 1916 3.439129 CCGGGTCACTTGGACTAATTTTC 59.561 47.826 0.00 0.00 46.16 2.29
1661 2281 5.751586 AGAAGTAAGGAGTGTTGTTGGAAA 58.248 37.500 0.00 0.00 0.00 3.13
1674 2294 3.838565 TGTTGGAAAGCTATGTTTGGGA 58.161 40.909 0.00 0.00 0.00 4.37
1841 2466 4.675114 GCTTTTGTTGTTAGGTTGACGATG 59.325 41.667 0.00 0.00 0.00 3.84
1914 2542 5.600669 AGTCAAAAGGGGTAGAAAATCCT 57.399 39.130 0.00 0.00 0.00 3.24
1949 2577 2.045561 TTCTCCGTTTTGCTTGGTGA 57.954 45.000 0.00 0.00 0.00 4.02
2048 2685 9.561069 TTTATCAGTCTAAAGGATTATTCTGCC 57.439 33.333 0.00 0.00 0.00 4.85
2097 2736 4.046938 TCCTTGATTCTGCATCGTCTAC 57.953 45.455 0.00 0.00 34.08 2.59
2372 3065 4.529897 TCCATTGCAGATGACTTAAGCAT 58.470 39.130 1.29 7.22 34.87 3.79
2384 3077 5.961272 TGACTTAAGCATCATGAGTACGAA 58.039 37.500 1.29 0.00 0.00 3.85
2387 3080 6.341316 ACTTAAGCATCATGAGTACGAATGT 58.659 36.000 1.29 0.00 0.00 2.71
2648 3368 1.337118 CCTAAAGCACCCAAGCCAAA 58.663 50.000 0.00 0.00 34.23 3.28
2738 3458 4.334759 CCCATCTACTGACTTTGCATCAAG 59.665 45.833 0.00 0.00 0.00 3.02
2787 3531 3.689161 TGCCATTTGTTCCTACGATGAAG 59.311 43.478 0.00 0.00 0.00 3.02
2846 3590 1.304713 CTGGCCAGGGAAGCAACAT 60.305 57.895 26.14 0.00 0.00 2.71
3010 3757 1.717645 GAGCTGAATTTGCGCTTGTTG 59.282 47.619 9.73 0.00 33.47 3.33
3041 3788 2.026822 CCTACAACTCAATGGTGCCTCT 60.027 50.000 0.00 0.00 36.69 3.69
3123 4054 4.956085 TCTGTGACGAATTTTTCTGAGGA 58.044 39.130 0.00 0.00 0.00 3.71
3190 4121 7.148188 GCAATTTGGATGTTCAGTCTGAGATTA 60.148 37.037 2.12 0.00 0.00 1.75
3232 4164 5.728471 TGAACTTTTTGCTCCATGTTTCAA 58.272 33.333 0.00 0.00 0.00 2.69
3376 4317 3.483808 TTGATTGTCTGTGTGGTAGCA 57.516 42.857 0.00 0.00 0.00 3.49
3377 4318 3.483808 TGATTGTCTGTGTGGTAGCAA 57.516 42.857 0.00 0.00 0.00 3.91
3393 4341 5.067153 TGGTAGCAAATTTATGATGAACCGG 59.933 40.000 0.00 0.00 0.00 5.28
3404 4353 4.545208 TGATGAACCGGTGTCTTTATCA 57.455 40.909 8.52 7.68 0.00 2.15
3405 4354 4.900684 TGATGAACCGGTGTCTTTATCAA 58.099 39.130 8.52 0.00 0.00 2.57
3465 4414 4.440758 GTGAACAACATGAATTTGTGTCCG 59.559 41.667 0.00 0.00 37.26 4.79
3467 4416 5.009510 TGAACAACATGAATTTGTGTCCGAT 59.990 36.000 0.00 0.00 37.26 4.18
3468 4417 5.452078 ACAACATGAATTTGTGTCCGATT 57.548 34.783 0.00 0.00 35.82 3.34
3479 4428 6.576551 TTTGTGTCCGATTTTTGCTTTAAC 57.423 33.333 0.00 0.00 0.00 2.01
3546 4496 6.786967 TTGGTGATAGAAGTAACCTACTCC 57.213 41.667 0.00 0.00 38.26 3.85
3547 4497 5.834460 TGGTGATAGAAGTAACCTACTCCA 58.166 41.667 0.00 0.00 38.26 3.86
3548 4498 6.441222 TGGTGATAGAAGTAACCTACTCCAT 58.559 40.000 0.00 0.00 38.26 3.41
3549 4499 6.550108 TGGTGATAGAAGTAACCTACTCCATC 59.450 42.308 0.00 0.00 38.26 3.51
3550 4500 6.015265 GGTGATAGAAGTAACCTACTCCATCC 60.015 46.154 0.00 0.00 38.26 3.51
3551 4501 6.550108 GTGATAGAAGTAACCTACTCCATCCA 59.450 42.308 0.00 0.00 38.26 3.41
3552 4502 7.233757 GTGATAGAAGTAACCTACTCCATCCAT 59.766 40.741 0.00 0.00 38.26 3.41
3553 4503 7.451877 TGATAGAAGTAACCTACTCCATCCATC 59.548 40.741 0.00 0.00 38.26 3.51
3554 4504 4.902448 AGAAGTAACCTACTCCATCCATCC 59.098 45.833 0.00 0.00 38.26 3.51
3555 4505 3.231818 AGTAACCTACTCCATCCATCCG 58.768 50.000 0.00 0.00 32.47 4.18
3556 4506 0.759346 AACCTACTCCATCCATCCGC 59.241 55.000 0.00 0.00 0.00 5.54
3557 4507 1.122019 ACCTACTCCATCCATCCGCC 61.122 60.000 0.00 0.00 0.00 6.13
3558 4508 0.833834 CCTACTCCATCCATCCGCCT 60.834 60.000 0.00 0.00 0.00 5.52
3559 4509 0.319728 CTACTCCATCCATCCGCCTG 59.680 60.000 0.00 0.00 0.00 4.85
3560 4510 1.758440 TACTCCATCCATCCGCCTGC 61.758 60.000 0.00 0.00 0.00 4.85
3561 4511 2.769621 TCCATCCATCCGCCTGCT 60.770 61.111 0.00 0.00 0.00 4.24
3562 4512 2.281345 CCATCCATCCGCCTGCTC 60.281 66.667 0.00 0.00 0.00 4.26
3563 4513 2.281345 CATCCATCCGCCTGCTCC 60.281 66.667 0.00 0.00 0.00 4.70
3564 4514 3.933722 ATCCATCCGCCTGCTCCG 61.934 66.667 0.00 0.00 0.00 4.63
3566 4516 4.899239 CCATCCGCCTGCTCCGTC 62.899 72.222 0.00 0.00 0.00 4.79
3567 4517 4.899239 CATCCGCCTGCTCCGTCC 62.899 72.222 0.00 0.00 0.00 4.79
3571 4521 4.147449 CGCCTGCTCCGTCCATGA 62.147 66.667 0.00 0.00 0.00 3.07
3572 4522 2.268920 GCCTGCTCCGTCCATGAA 59.731 61.111 0.00 0.00 0.00 2.57
3573 4523 1.153086 GCCTGCTCCGTCCATGAAT 60.153 57.895 0.00 0.00 0.00 2.57
3574 4524 0.106708 GCCTGCTCCGTCCATGAATA 59.893 55.000 0.00 0.00 0.00 1.75
3575 4525 1.475034 GCCTGCTCCGTCCATGAATAA 60.475 52.381 0.00 0.00 0.00 1.40
3576 4526 2.487934 CCTGCTCCGTCCATGAATAAG 58.512 52.381 0.00 0.00 0.00 1.73
3577 4527 2.158900 CCTGCTCCGTCCATGAATAAGT 60.159 50.000 0.00 0.00 0.00 2.24
3578 4528 2.868583 CTGCTCCGTCCATGAATAAGTG 59.131 50.000 0.00 0.00 0.00 3.16
3579 4529 2.213499 GCTCCGTCCATGAATAAGTGG 58.787 52.381 0.00 0.00 36.82 4.00
3580 4530 2.158957 GCTCCGTCCATGAATAAGTGGA 60.159 50.000 0.00 0.00 42.03 4.02
3590 4540 8.737168 TCCATGAATAAGTGGACAAAATCTAG 57.263 34.615 0.00 0.00 39.51 2.43
3591 4541 8.548025 TCCATGAATAAGTGGACAAAATCTAGA 58.452 33.333 0.00 0.00 39.51 2.43
3592 4542 9.347240 CCATGAATAAGTGGACAAAATCTAGAT 57.653 33.333 0.00 0.00 37.72 1.98
3594 4544 9.911788 ATGAATAAGTGGACAAAATCTAGATGT 57.088 29.630 5.86 0.99 0.00 3.06
3606 4556 8.818057 ACAAAATCTAGATGTACACTTATTCGC 58.182 33.333 5.86 0.00 0.00 4.70
3607 4557 7.624706 AAATCTAGATGTACACTTATTCGCG 57.375 36.000 5.86 0.00 0.00 5.87
3608 4558 5.104562 TCTAGATGTACACTTATTCGCGG 57.895 43.478 6.13 0.00 0.00 6.46
3609 4559 4.818005 TCTAGATGTACACTTATTCGCGGA 59.182 41.667 6.13 0.00 0.00 5.54
3610 4560 3.703420 AGATGTACACTTATTCGCGGAC 58.297 45.455 6.13 0.00 0.00 4.79
3611 4561 1.898938 TGTACACTTATTCGCGGACG 58.101 50.000 6.13 0.00 42.01 4.79
3612 4562 1.194495 GTACACTTATTCGCGGACGG 58.806 55.000 6.13 0.00 40.63 4.79
3613 4563 1.093972 TACACTTATTCGCGGACGGA 58.906 50.000 6.13 0.00 40.63 4.69
3614 4564 0.179145 ACACTTATTCGCGGACGGAG 60.179 55.000 6.13 0.00 40.63 4.63
3615 4565 0.870307 CACTTATTCGCGGACGGAGG 60.870 60.000 6.13 0.00 40.63 4.30
3616 4566 1.299926 CTTATTCGCGGACGGAGGG 60.300 63.158 6.13 0.00 40.63 4.30
3617 4567 1.731433 CTTATTCGCGGACGGAGGGA 61.731 60.000 6.13 0.00 40.63 4.20
3618 4568 1.731433 TTATTCGCGGACGGAGGGAG 61.731 60.000 6.13 0.00 40.63 4.30
3712 4663 1.165270 ACAGGTGCGGCAAGTTTATC 58.835 50.000 3.23 0.00 0.00 1.75
3741 4692 3.054065 AGTCCTAAGAAGAATGGGCTTGG 60.054 47.826 0.00 0.00 29.08 3.61
3747 4698 2.027385 GAAGAATGGGCTTGGGATGAC 58.973 52.381 0.00 0.00 0.00 3.06
3748 4699 0.107017 AGAATGGGCTTGGGATGACG 60.107 55.000 0.00 0.00 0.00 4.35
3749 4700 1.076777 AATGGGCTTGGGATGACGG 60.077 57.895 0.00 0.00 0.00 4.79
3750 4701 1.570857 AATGGGCTTGGGATGACGGA 61.571 55.000 0.00 0.00 0.00 4.69
3751 4702 1.570857 ATGGGCTTGGGATGACGGAA 61.571 55.000 0.00 0.00 0.00 4.30
3752 4703 1.001393 GGGCTTGGGATGACGGAAA 60.001 57.895 0.00 0.00 0.00 3.13
3753 4704 1.032114 GGGCTTGGGATGACGGAAAG 61.032 60.000 0.00 0.00 0.00 2.62
3754 4705 0.322546 GGCTTGGGATGACGGAAAGT 60.323 55.000 0.00 0.00 0.00 2.66
3766 4717 1.886542 ACGGAAAGTCAATTTGGCTCC 59.113 47.619 3.58 1.72 26.08 4.70
3767 4718 1.202348 CGGAAAGTCAATTTGGCTCCC 59.798 52.381 3.58 7.95 26.08 4.30
3768 4719 1.202348 GGAAAGTCAATTTGGCTCCCG 59.798 52.381 3.58 0.00 26.08 5.14
3769 4720 1.202348 GAAAGTCAATTTGGCTCCCGG 59.798 52.381 3.58 0.00 26.08 5.73
3770 4721 0.611896 AAGTCAATTTGGCTCCCGGG 60.612 55.000 16.85 16.85 26.08 5.73
3771 4722 1.304134 GTCAATTTGGCTCCCGGGT 60.304 57.895 22.86 0.00 0.00 5.28
3772 4723 1.304052 TCAATTTGGCTCCCGGGTG 60.304 57.895 22.86 20.53 0.00 4.61
3773 4724 2.679996 AATTTGGCTCCCGGGTGC 60.680 61.111 34.54 34.54 0.00 5.01
3774 4725 3.521765 AATTTGGCTCCCGGGTGCA 62.522 57.895 39.91 26.58 36.47 4.57
3775 4726 2.803593 AATTTGGCTCCCGGGTGCAT 62.804 55.000 39.91 26.34 36.47 3.96
3776 4727 2.803593 ATTTGGCTCCCGGGTGCATT 62.804 55.000 39.91 22.69 36.47 3.56
3777 4728 2.143575 TTTGGCTCCCGGGTGCATTA 62.144 55.000 39.91 26.21 36.47 1.90
3778 4729 2.203209 GGCTCCCGGGTGCATTAG 60.203 66.667 39.91 22.74 36.47 1.73
3779 4730 2.902343 GCTCCCGGGTGCATTAGC 60.902 66.667 36.48 25.52 42.57 3.09
3790 4741 4.122149 CATTAGCACCCGGGGCCA 62.122 66.667 27.92 11.96 0.00 5.36
3791 4742 3.103213 ATTAGCACCCGGGGCCAT 61.103 61.111 27.92 16.43 0.00 4.40
3792 4743 2.700185 ATTAGCACCCGGGGCCATT 61.700 57.895 27.92 11.99 0.00 3.16
3793 4744 2.236959 ATTAGCACCCGGGGCCATTT 62.237 55.000 27.92 11.63 0.00 2.32
3794 4745 2.448473 TTAGCACCCGGGGCCATTTT 62.448 55.000 27.92 11.26 0.00 1.82
3795 4746 2.448473 TAGCACCCGGGGCCATTTTT 62.448 55.000 27.92 10.55 0.00 1.94
3871 4822 9.674068 TTGTCATATACAAATGCTACCTGTAAA 57.326 29.630 0.00 0.00 45.11 2.01
3872 4823 9.845740 TGTCATATACAAATGCTACCTGTAAAT 57.154 29.630 0.00 0.00 34.29 1.40
3879 4830 8.177119 ACAAATGCTACCTGTAAATTTTGAGA 57.823 30.769 0.00 0.00 0.00 3.27
3880 4831 8.082242 ACAAATGCTACCTGTAAATTTTGAGAC 58.918 33.333 0.00 0.00 0.00 3.36
3881 4832 7.759489 AATGCTACCTGTAAATTTTGAGACA 57.241 32.000 0.00 0.00 0.00 3.41
3882 4833 7.759489 ATGCTACCTGTAAATTTTGAGACAA 57.241 32.000 0.00 0.00 0.00 3.18
3883 4834 7.575414 TGCTACCTGTAAATTTTGAGACAAA 57.425 32.000 0.00 0.00 0.00 2.83
3884 4835 8.001881 TGCTACCTGTAAATTTTGAGACAAAA 57.998 30.769 11.14 11.14 0.00 2.44
3885 4836 8.470805 TGCTACCTGTAAATTTTGAGACAAAAA 58.529 29.630 12.43 0.00 33.76 1.94
3905 4856 6.603237 AAAAAGTTAAGCATTTTGACCTGC 57.397 33.333 0.00 0.00 38.69 4.85
3906 4857 3.559238 AGTTAAGCATTTTGACCTGCG 57.441 42.857 0.00 0.00 43.17 5.18
3907 4858 1.985684 GTTAAGCATTTTGACCTGCGC 59.014 47.619 0.00 0.00 43.17 6.09
3908 4859 1.242989 TAAGCATTTTGACCTGCGCA 58.757 45.000 10.98 10.98 43.17 6.09
3909 4860 0.388659 AAGCATTTTGACCTGCGCAA 59.611 45.000 13.05 0.00 43.17 4.85
3910 4861 0.388659 AGCATTTTGACCTGCGCAAA 59.611 45.000 13.05 1.02 43.17 3.68
3911 4862 1.202510 AGCATTTTGACCTGCGCAAAA 60.203 42.857 13.05 9.31 45.79 2.44
3912 4863 1.596727 GCATTTTGACCTGCGCAAAAA 59.403 42.857 17.30 17.30 45.14 1.94
3938 4889 3.683365 AATCAAAGGCCAAATGTCACC 57.317 42.857 5.01 0.00 0.00 4.02
3939 4890 1.337118 TCAAAGGCCAAATGTCACCC 58.663 50.000 5.01 0.00 0.00 4.61
3940 4891 0.321346 CAAAGGCCAAATGTCACCCC 59.679 55.000 5.01 0.00 0.00 4.95
3941 4892 0.105246 AAAGGCCAAATGTCACCCCA 60.105 50.000 5.01 0.00 0.00 4.96
3942 4893 0.105246 AAGGCCAAATGTCACCCCAA 60.105 50.000 5.01 0.00 0.00 4.12
3943 4894 0.105246 AGGCCAAATGTCACCCCAAA 60.105 50.000 5.01 0.00 0.00 3.28
3944 4895 0.761802 GGCCAAATGTCACCCCAAAA 59.238 50.000 0.00 0.00 0.00 2.44
3945 4896 1.350684 GGCCAAATGTCACCCCAAAAT 59.649 47.619 0.00 0.00 0.00 1.82
3946 4897 2.425539 GCCAAATGTCACCCCAAAATG 58.574 47.619 0.00 0.00 0.00 2.32
3947 4898 2.224499 GCCAAATGTCACCCCAAAATGT 60.224 45.455 0.00 0.00 0.00 2.71
3948 4899 3.663025 CCAAATGTCACCCCAAAATGTC 58.337 45.455 0.00 0.00 0.00 3.06
3949 4900 3.070734 CCAAATGTCACCCCAAAATGTCA 59.929 43.478 0.00 0.00 0.00 3.58
3950 4901 4.057432 CAAATGTCACCCCAAAATGTCAC 58.943 43.478 0.00 0.00 0.00 3.67
3951 4902 1.698506 TGTCACCCCAAAATGTCACC 58.301 50.000 0.00 0.00 0.00 4.02
3952 4903 1.063642 TGTCACCCCAAAATGTCACCA 60.064 47.619 0.00 0.00 0.00 4.17
3953 4904 2.035632 GTCACCCCAAAATGTCACCAA 58.964 47.619 0.00 0.00 0.00 3.67
3954 4905 2.432510 GTCACCCCAAAATGTCACCAAA 59.567 45.455 0.00 0.00 0.00 3.28
3955 4906 3.107601 TCACCCCAAAATGTCACCAAAA 58.892 40.909 0.00 0.00 0.00 2.44
3956 4907 3.713764 TCACCCCAAAATGTCACCAAAAT 59.286 39.130 0.00 0.00 0.00 1.82
3957 4908 4.164988 TCACCCCAAAATGTCACCAAAATT 59.835 37.500 0.00 0.00 0.00 1.82
3958 4909 4.886489 CACCCCAAAATGTCACCAAAATTT 59.114 37.500 0.00 0.00 0.00 1.82
3959 4910 6.058183 CACCCCAAAATGTCACCAAAATTTA 58.942 36.000 0.00 0.00 0.00 1.40
3960 4911 6.714356 CACCCCAAAATGTCACCAAAATTTAT 59.286 34.615 0.00 0.00 0.00 1.40
3961 4912 7.230309 CACCCCAAAATGTCACCAAAATTTATT 59.770 33.333 0.00 0.00 0.00 1.40
3962 4913 7.782168 ACCCCAAAATGTCACCAAAATTTATTT 59.218 29.630 0.00 0.00 0.00 1.40
3963 4914 8.637099 CCCCAAAATGTCACCAAAATTTATTTT 58.363 29.630 0.00 0.00 40.37 1.82
3981 4932 2.828874 TTTTTCACCGACGAAACACC 57.171 45.000 0.00 0.00 34.68 4.16
3982 4933 0.651551 TTTTCACCGACGAAACACCG 59.348 50.000 0.00 0.00 34.68 4.94
3983 4934 1.764180 TTTCACCGACGAAACACCGC 61.764 55.000 0.00 0.00 30.00 5.68
3984 4935 2.632136 TTCACCGACGAAACACCGCT 62.632 55.000 0.00 0.00 0.00 5.52
3985 4936 2.660552 ACCGACGAAACACCGCTG 60.661 61.111 0.00 0.00 0.00 5.18
3986 4937 4.072088 CCGACGAAACACCGCTGC 62.072 66.667 0.00 0.00 0.00 5.25
3987 4938 3.036084 CGACGAAACACCGCTGCT 61.036 61.111 0.00 0.00 0.00 4.24
3988 4939 2.853914 GACGAAACACCGCTGCTC 59.146 61.111 0.00 0.00 0.00 4.26
3989 4940 2.665185 ACGAAACACCGCTGCTCC 60.665 61.111 0.00 0.00 0.00 4.70
3990 4941 3.777925 CGAAACACCGCTGCTCCG 61.778 66.667 0.00 0.00 0.00 4.63
3991 4942 2.665185 GAAACACCGCTGCTCCGT 60.665 61.111 0.00 0.00 0.00 4.69
3992 4943 2.203153 AAACACCGCTGCTCCGTT 60.203 55.556 0.00 0.00 0.00 4.44
3993 4944 2.171489 GAAACACCGCTGCTCCGTTC 62.171 60.000 0.00 0.00 0.00 3.95
3994 4945 4.681978 ACACCGCTGCTCCGTTCC 62.682 66.667 0.00 0.00 0.00 3.62
3999 4950 3.869272 GCTGCTCCGTTCCGCATG 61.869 66.667 0.00 0.00 35.32 4.06
4000 4951 2.125552 CTGCTCCGTTCCGCATGA 60.126 61.111 0.00 0.00 35.32 3.07
4001 4952 1.741401 CTGCTCCGTTCCGCATGAA 60.741 57.895 0.00 0.00 35.32 2.57
4002 4953 1.298157 CTGCTCCGTTCCGCATGAAA 61.298 55.000 0.00 0.00 35.32 2.69
4003 4954 0.676466 TGCTCCGTTCCGCATGAAAT 60.676 50.000 0.00 0.00 33.94 2.17
4004 4955 0.451783 GCTCCGTTCCGCATGAAATT 59.548 50.000 0.00 0.00 33.94 1.82
4005 4956 1.135402 GCTCCGTTCCGCATGAAATTT 60.135 47.619 0.00 0.00 33.94 1.82
4006 4957 2.518949 CTCCGTTCCGCATGAAATTTG 58.481 47.619 0.00 0.00 33.94 2.32
4007 4958 2.155279 TCCGTTCCGCATGAAATTTGA 58.845 42.857 0.00 0.00 33.94 2.69
4008 4959 2.095466 TCCGTTCCGCATGAAATTTGAC 60.095 45.455 0.00 0.00 33.94 3.18
4009 4960 2.351253 CCGTTCCGCATGAAATTTGACA 60.351 45.455 0.00 0.00 33.94 3.58
4010 4961 3.304257 CGTTCCGCATGAAATTTGACAA 58.696 40.909 0.00 0.00 33.94 3.18
4011 4962 3.361644 CGTTCCGCATGAAATTTGACAAG 59.638 43.478 0.00 0.00 33.94 3.16
4012 4963 2.945278 TCCGCATGAAATTTGACAAGC 58.055 42.857 0.00 0.00 0.00 4.01
4013 4964 2.295629 TCCGCATGAAATTTGACAAGCA 59.704 40.909 0.00 0.00 31.57 3.91
4014 4965 3.056678 TCCGCATGAAATTTGACAAGCAT 60.057 39.130 0.00 0.00 31.57 3.79
4015 4966 3.061563 CCGCATGAAATTTGACAAGCATG 59.938 43.478 0.00 3.22 36.95 4.06
4016 4967 3.676172 CGCATGAAATTTGACAAGCATGT 59.324 39.130 13.63 0.00 44.25 3.21
4017 4968 4.150980 CGCATGAAATTTGACAAGCATGTT 59.849 37.500 13.63 0.00 40.74 2.71
4018 4969 5.333492 CGCATGAAATTTGACAAGCATGTTT 60.333 36.000 13.63 0.00 40.74 2.83
4019 4970 5.849081 GCATGAAATTTGACAAGCATGTTTG 59.151 36.000 19.42 19.42 40.74 2.93
4030 4981 2.791383 GCATGTTTGCTACACCAACA 57.209 45.000 0.00 0.00 45.77 3.33
4031 4982 3.302365 GCATGTTTGCTACACCAACAT 57.698 42.857 0.00 0.00 45.77 2.71
4032 4983 2.988493 GCATGTTTGCTACACCAACATG 59.012 45.455 16.43 16.43 45.77 3.21
4033 4984 3.305267 GCATGTTTGCTACACCAACATGA 60.305 43.478 22.37 0.00 45.77 3.07
4034 4985 4.618927 GCATGTTTGCTACACCAACATGAT 60.619 41.667 22.37 0.00 45.77 2.45
4035 4986 4.764679 TGTTTGCTACACCAACATGATC 57.235 40.909 0.00 0.00 0.00 2.92
4036 4987 4.140536 TGTTTGCTACACCAACATGATCA 58.859 39.130 0.00 0.00 0.00 2.92
4037 4988 4.766373 TGTTTGCTACACCAACATGATCAT 59.234 37.500 1.18 1.18 0.00 2.45
4038 4989 5.106197 TGTTTGCTACACCAACATGATCATC 60.106 40.000 4.86 0.00 0.00 2.92
4039 4990 4.492494 TGCTACACCAACATGATCATCT 57.508 40.909 4.86 0.00 0.00 2.90
4040 4991 5.612725 TGCTACACCAACATGATCATCTA 57.387 39.130 4.86 0.00 0.00 1.98
4041 4992 5.359756 TGCTACACCAACATGATCATCTAC 58.640 41.667 4.86 0.00 0.00 2.59
4042 4993 5.104982 TGCTACACCAACATGATCATCTACA 60.105 40.000 4.86 0.00 0.00 2.74
4043 4994 5.817296 GCTACACCAACATGATCATCTACAA 59.183 40.000 4.86 0.00 0.00 2.41
4044 4995 6.316140 GCTACACCAACATGATCATCTACAAA 59.684 38.462 4.86 0.00 0.00 2.83
4045 4996 7.148255 GCTACACCAACATGATCATCTACAAAA 60.148 37.037 4.86 0.00 0.00 2.44
4046 4997 7.523293 ACACCAACATGATCATCTACAAAAA 57.477 32.000 4.86 0.00 0.00 1.94
4087 5038 9.688091 AAAACATTTAAATTTTTGGGGTACTGT 57.312 25.926 11.95 0.00 0.00 3.55
4088 5039 9.688091 AAACATTTAAATTTTTGGGGTACTGTT 57.312 25.926 10.72 1.37 0.00 3.16
4089 5040 8.896320 ACATTTAAATTTTTGGGGTACTGTTC 57.104 30.769 0.00 0.00 0.00 3.18
4090 5041 8.487028 ACATTTAAATTTTTGGGGTACTGTTCA 58.513 29.630 0.00 0.00 0.00 3.18
4091 5042 9.500785 CATTTAAATTTTTGGGGTACTGTTCAT 57.499 29.630 0.00 0.00 0.00 2.57
4092 5043 9.719355 ATTTAAATTTTTGGGGTACTGTTCATC 57.281 29.630 0.00 0.00 0.00 2.92
4093 5044 5.738619 AATTTTTGGGGTACTGTTCATCC 57.261 39.130 0.00 0.00 0.00 3.51
4094 5045 2.483014 TTTGGGGTACTGTTCATCCG 57.517 50.000 0.00 0.00 0.00 4.18
4095 5046 0.616371 TTGGGGTACTGTTCATCCGG 59.384 55.000 0.00 0.00 0.00 5.14
4096 5047 1.268992 TGGGGTACTGTTCATCCGGG 61.269 60.000 0.00 0.00 0.00 5.73
4097 5048 1.269703 GGGGTACTGTTCATCCGGGT 61.270 60.000 0.00 0.00 0.00 5.28
4098 5049 0.107848 GGGTACTGTTCATCCGGGTG 60.108 60.000 8.97 8.97 0.00 4.61
4099 5050 0.743345 GGTACTGTTCATCCGGGTGC 60.743 60.000 10.80 0.00 0.00 5.01
4100 5051 0.036765 GTACTGTTCATCCGGGTGCA 60.037 55.000 10.80 1.76 0.00 4.57
4101 5052 0.687920 TACTGTTCATCCGGGTGCAA 59.312 50.000 10.80 2.38 0.00 4.08
4102 5053 0.179004 ACTGTTCATCCGGGTGCAAA 60.179 50.000 10.80 0.00 0.00 3.68
4103 5054 1.176527 CTGTTCATCCGGGTGCAAAT 58.823 50.000 10.80 0.00 0.00 2.32
4104 5055 0.887247 TGTTCATCCGGGTGCAAATG 59.113 50.000 10.80 0.24 0.00 2.32
4105 5056 0.458370 GTTCATCCGGGTGCAAATGC 60.458 55.000 10.80 0.00 42.50 3.56
4115 5066 4.133796 GCAAATGCACCCGGGAGC 62.134 66.667 33.35 33.35 41.59 4.70
4116 5067 3.451894 CAAATGCACCCGGGAGCC 61.452 66.667 35.77 20.40 0.00 4.70
4117 5068 3.978193 AAATGCACCCGGGAGCCA 61.978 61.111 35.77 24.84 0.00 4.75
4118 5069 3.521765 AAATGCACCCGGGAGCCAA 62.522 57.895 35.77 21.62 0.00 4.52
4119 5070 3.521765 AATGCACCCGGGAGCCAAA 62.522 57.895 35.77 20.89 0.00 3.28
4120 5071 3.521765 ATGCACCCGGGAGCCAAAA 62.522 57.895 35.77 20.52 0.00 2.44
4121 5072 3.680786 GCACCCGGGAGCCAAAAC 61.681 66.667 30.60 3.28 0.00 2.43
4122 5073 3.361977 CACCCGGGAGCCAAAACG 61.362 66.667 32.02 0.00 0.00 3.60
4126 5077 2.983592 CGGGAGCCAAAACGCCTT 60.984 61.111 0.00 0.00 0.00 4.35
4127 5078 2.650778 GGGAGCCAAAACGCCTTG 59.349 61.111 0.00 0.00 0.00 3.61
4129 5080 2.650778 GAGCCAAAACGCCTTGGG 59.349 61.111 15.75 2.96 45.21 4.12
4130 5081 1.901464 GAGCCAAAACGCCTTGGGA 60.901 57.895 15.75 0.00 45.21 4.37
4131 5082 1.228862 AGCCAAAACGCCTTGGGAT 60.229 52.632 15.75 0.00 45.21 3.85
4132 5083 1.079888 GCCAAAACGCCTTGGGATG 60.080 57.895 15.75 0.00 45.21 3.51
4133 5084 1.531739 GCCAAAACGCCTTGGGATGA 61.532 55.000 15.75 0.00 45.21 2.92
4134 5085 0.965439 CCAAAACGCCTTGGGATGAA 59.035 50.000 8.00 0.00 41.96 2.57
4135 5086 1.067635 CCAAAACGCCTTGGGATGAAG 60.068 52.381 8.00 0.00 41.96 3.02
4136 5087 1.885887 CAAAACGCCTTGGGATGAAGA 59.114 47.619 0.00 0.00 0.00 2.87
4137 5088 1.534729 AAACGCCTTGGGATGAAGAC 58.465 50.000 0.00 0.00 0.00 3.01
4138 5089 0.693049 AACGCCTTGGGATGAAGACT 59.307 50.000 0.00 0.00 0.00 3.24
4139 5090 1.568504 ACGCCTTGGGATGAAGACTA 58.431 50.000 0.00 0.00 0.00 2.59
4140 5091 2.119495 ACGCCTTGGGATGAAGACTAT 58.881 47.619 0.00 0.00 0.00 2.12
4141 5092 3.305720 ACGCCTTGGGATGAAGACTATA 58.694 45.455 0.00 0.00 0.00 1.31
4142 5093 3.709653 ACGCCTTGGGATGAAGACTATAA 59.290 43.478 0.00 0.00 0.00 0.98
4143 5094 4.348168 ACGCCTTGGGATGAAGACTATAAT 59.652 41.667 0.00 0.00 0.00 1.28
4144 5095 5.163195 ACGCCTTGGGATGAAGACTATAATT 60.163 40.000 0.00 0.00 0.00 1.40
4145 5096 5.765182 CGCCTTGGGATGAAGACTATAATTT 59.235 40.000 0.00 0.00 0.00 1.82
4146 5097 6.263168 CGCCTTGGGATGAAGACTATAATTTT 59.737 38.462 0.00 0.00 0.00 1.82
4147 5098 7.444183 CGCCTTGGGATGAAGACTATAATTTTA 59.556 37.037 0.00 0.00 0.00 1.52
4148 5099 8.568794 GCCTTGGGATGAAGACTATAATTTTAC 58.431 37.037 0.00 0.00 0.00 2.01
4149 5100 9.067986 CCTTGGGATGAAGACTATAATTTTACC 57.932 37.037 0.00 0.00 0.00 2.85
4150 5101 9.853177 CTTGGGATGAAGACTATAATTTTACCT 57.147 33.333 0.00 0.00 0.00 3.08
4151 5102 9.847224 TTGGGATGAAGACTATAATTTTACCTC 57.153 33.333 0.00 0.00 0.00 3.85
4152 5103 8.437575 TGGGATGAAGACTATAATTTTACCTCC 58.562 37.037 0.00 0.00 0.00 4.30
4153 5104 8.437575 GGGATGAAGACTATAATTTTACCTCCA 58.562 37.037 0.00 0.00 0.00 3.86
4167 5118 6.588719 TTTACCTCCATCTTTCATTTGTGG 57.411 37.500 0.00 0.00 0.00 4.17
4168 5119 4.118168 ACCTCCATCTTTCATTTGTGGT 57.882 40.909 0.00 0.00 0.00 4.16
4169 5120 5.255397 ACCTCCATCTTTCATTTGTGGTA 57.745 39.130 0.00 0.00 0.00 3.25
4170 5121 5.831103 ACCTCCATCTTTCATTTGTGGTAT 58.169 37.500 0.00 0.00 0.00 2.73
4171 5122 5.888161 ACCTCCATCTTTCATTTGTGGTATC 59.112 40.000 0.00 0.00 0.00 2.24
4172 5123 5.300286 CCTCCATCTTTCATTTGTGGTATCC 59.700 44.000 0.00 0.00 0.00 2.59
4173 5124 5.825532 TCCATCTTTCATTTGTGGTATCCA 58.174 37.500 0.00 0.00 0.00 3.41
4174 5125 6.434302 TCCATCTTTCATTTGTGGTATCCAT 58.566 36.000 0.00 0.00 35.28 3.41
4175 5126 6.547141 TCCATCTTTCATTTGTGGTATCCATC 59.453 38.462 0.00 0.00 35.28 3.51
4176 5127 6.548622 CCATCTTTCATTTGTGGTATCCATCT 59.451 38.462 0.00 0.00 35.28 2.90
4177 5128 7.069085 CCATCTTTCATTTGTGGTATCCATCTT 59.931 37.037 0.00 0.00 35.28 2.40
4178 5129 7.630242 TCTTTCATTTGTGGTATCCATCTTC 57.370 36.000 0.00 0.00 35.28 2.87
4179 5130 7.174413 TCTTTCATTTGTGGTATCCATCTTCA 58.826 34.615 0.00 0.00 35.28 3.02
4180 5131 6.757897 TTCATTTGTGGTATCCATCTTCAC 57.242 37.500 0.00 0.00 35.28 3.18
4181 5132 5.814481 TCATTTGTGGTATCCATCTTCACA 58.186 37.500 0.00 0.00 35.28 3.58
4182 5133 5.647658 TCATTTGTGGTATCCATCTTCACAC 59.352 40.000 0.00 0.00 37.96 3.82
4183 5134 3.245518 TGTGGTATCCATCTTCACACG 57.754 47.619 0.00 0.00 35.28 4.49
4184 5135 2.829120 TGTGGTATCCATCTTCACACGA 59.171 45.455 0.00 0.00 35.28 4.35
4185 5136 3.119137 TGTGGTATCCATCTTCACACGAG 60.119 47.826 0.00 0.00 35.28 4.18
4186 5137 3.096852 TGGTATCCATCTTCACACGAGT 58.903 45.455 0.00 0.00 0.00 4.18
4187 5138 5.205386 GTGGTATCCATCTTCACACGAGTG 61.205 50.000 6.65 6.65 40.67 3.51
4188 5139 3.119101 GGTATCCATCTTCACACGAGTGT 60.119 47.826 12.78 2.62 46.01 3.55
4189 5140 4.097437 GGTATCCATCTTCACACGAGTGTA 59.903 45.833 12.78 2.45 46.01 2.90
4190 5141 3.570926 TCCATCTTCACACGAGTGTAC 57.429 47.619 12.78 0.00 46.01 2.90
4191 5142 3.154710 TCCATCTTCACACGAGTGTACT 58.845 45.455 12.78 0.00 46.01 2.73
4192 5143 4.329392 TCCATCTTCACACGAGTGTACTA 58.671 43.478 12.78 0.00 46.01 1.82
4193 5144 4.155462 TCCATCTTCACACGAGTGTACTAC 59.845 45.833 12.78 0.00 46.01 2.73
4194 5145 4.156190 CCATCTTCACACGAGTGTACTACT 59.844 45.833 12.78 0.00 46.01 2.57
4195 5146 5.335740 CCATCTTCACACGAGTGTACTACTT 60.336 44.000 12.78 0.00 46.01 2.24
4196 5147 5.762825 TCTTCACACGAGTGTACTACTTT 57.237 39.130 12.78 0.00 46.01 2.66
4197 5148 5.516996 TCTTCACACGAGTGTACTACTTTG 58.483 41.667 12.78 1.48 46.01 2.77
4198 5149 5.297527 TCTTCACACGAGTGTACTACTTTGA 59.702 40.000 12.78 0.00 46.01 2.69
4199 5150 4.852138 TCACACGAGTGTACTACTTTGAC 58.148 43.478 12.78 0.00 46.01 3.18
4200 5151 3.662645 CACACGAGTGTACTACTTTGACG 59.337 47.826 8.68 0.00 42.83 4.35
4201 5152 3.231965 CACGAGTGTACTACTTTGACGG 58.768 50.000 0.00 0.00 40.53 4.79
4202 5153 2.880890 ACGAGTGTACTACTTTGACGGT 59.119 45.455 0.00 0.00 40.53 4.83
4203 5154 4.065088 ACGAGTGTACTACTTTGACGGTA 58.935 43.478 0.00 0.00 40.53 4.02
4204 5155 4.515191 ACGAGTGTACTACTTTGACGGTAA 59.485 41.667 0.00 0.00 40.53 2.85
4205 5156 5.084722 CGAGTGTACTACTTTGACGGTAAG 58.915 45.833 0.00 0.00 40.53 2.34
4206 5157 5.106948 CGAGTGTACTACTTTGACGGTAAGA 60.107 44.000 0.00 0.00 40.53 2.10
4207 5158 6.251655 AGTGTACTACTTTGACGGTAAGAG 57.748 41.667 0.00 0.00 35.67 2.85
4208 5159 5.767168 AGTGTACTACTTTGACGGTAAGAGT 59.233 40.000 0.00 0.00 35.67 3.24
4209 5160 6.936900 AGTGTACTACTTTGACGGTAAGAGTA 59.063 38.462 0.00 0.00 35.67 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.541120 GCACTCTCCATGCATCCGC 61.541 63.158 0.00 0.00 42.88 5.54
6 7 1.171308 ATGTTGTGCACTCTCCATGC 58.829 50.000 19.41 0.09 43.68 4.06
7 8 4.005650 ACTAATGTTGTGCACTCTCCATG 58.994 43.478 19.41 6.39 0.00 3.66
9 10 3.769739 ACTAATGTTGTGCACTCTCCA 57.230 42.857 19.41 9.38 0.00 3.86
10 11 9.197694 CTATATTACTAATGTTGTGCACTCTCC 57.802 37.037 19.41 3.64 0.00 3.71
11 12 9.751542 ACTATATTACTAATGTTGTGCACTCTC 57.248 33.333 19.41 8.80 0.00 3.20
12 13 9.751542 GACTATATTACTAATGTTGTGCACTCT 57.248 33.333 19.41 0.31 0.00 3.24
41 420 7.892609 TCAAGATTGTAGTACACACATGTAGT 58.107 34.615 1.43 2.93 45.25 2.73
42 421 7.009631 GCTCAAGATTGTAGTACACACATGTAG 59.990 40.741 1.43 0.00 42.06 2.74
43 422 6.811665 GCTCAAGATTGTAGTACACACATGTA 59.188 38.462 1.43 0.00 40.48 2.29
44 423 5.639506 GCTCAAGATTGTAGTACACACATGT 59.360 40.000 1.43 0.00 43.30 3.21
45 424 5.871524 AGCTCAAGATTGTAGTACACACATG 59.128 40.000 1.43 3.98 36.69 3.21
46 425 6.042638 AGCTCAAGATTGTAGTACACACAT 57.957 37.500 1.43 0.00 36.69 3.21
47 426 5.468540 AGCTCAAGATTGTAGTACACACA 57.531 39.130 1.43 0.00 36.69 3.72
48 427 7.759886 TCATTAGCTCAAGATTGTAGTACACAC 59.240 37.037 1.43 0.24 36.69 3.82
349 741 1.604308 TACACTCTTCGTCCGGGCA 60.604 57.895 6.96 0.00 0.00 5.36
659 1063 9.382244 CTAAACAACTAACCAAAAATCTTCTCG 57.618 33.333 0.00 0.00 0.00 4.04
677 1081 4.722361 TGGGTTCAACCAACTAAACAAC 57.278 40.909 9.35 0.00 41.02 3.32
912 1363 2.654877 CACGCGTTAGTGAGGGGT 59.345 61.111 10.22 0.00 44.43 4.95
1072 1527 1.299850 CCTTGTCGCAGTCGTCACA 60.300 57.895 0.00 0.00 33.84 3.58
1168 1625 2.023414 TTCTCGGTCCACAGCGTTGT 62.023 55.000 0.00 0.00 44.16 3.32
1246 1704 4.459089 GTCCAGCCTGAGTCGCCC 62.459 72.222 0.00 0.00 0.00 6.13
1284 1742 1.344942 CGAACTCCTTGAACTCGGCG 61.345 60.000 0.00 0.00 0.00 6.46
1352 1810 2.103373 CCTCCTCGTCATCCTTCTCAA 58.897 52.381 0.00 0.00 0.00 3.02
1379 1837 1.379642 GGCAAAGGGCTTGATCTCGG 61.380 60.000 0.00 0.00 44.01 4.63
1407 1868 0.722676 TACCATGGGAGAGGGACCTT 59.277 55.000 18.09 0.00 0.00 3.50
1455 1916 6.128445 CGCTAAAGGTAAGGATATGCAGATTG 60.128 42.308 0.00 0.00 0.00 2.67
1661 2281 0.328258 AACGCCTCCCAAACATAGCT 59.672 50.000 0.00 0.00 0.00 3.32
1674 2294 2.632987 AACAAACAGGAGTAACGCCT 57.367 45.000 0.00 0.00 32.88 5.52
1817 2442 3.942748 TCGTCAACCTAACAACAAAAGCT 59.057 39.130 0.00 0.00 0.00 3.74
1818 2443 4.281525 TCGTCAACCTAACAACAAAAGC 57.718 40.909 0.00 0.00 0.00 3.51
1841 2466 8.869897 TCAAAGATCACGAGTATAAATCACAAC 58.130 33.333 0.00 0.00 0.00 3.32
1878 2506 5.270853 CCTTTTGACTAAACGGTGAACTTG 58.729 41.667 0.00 0.00 32.21 3.16
1914 2542 5.627135 ACGGAGAAATTTAACCCTTTCTGA 58.373 37.500 10.16 0.00 40.77 3.27
1949 2577 0.846693 ACAGTTCAAGAGGCCAAGGT 59.153 50.000 5.01 0.00 0.00 3.50
2048 2685 9.716507 ATACTTTTAATTCGGATTCAACGATTG 57.283 29.630 0.00 0.00 40.38 2.67
2372 3065 6.429692 ACCATCAAAAACATTCGTACTCATGA 59.570 34.615 7.86 0.00 0.00 3.07
2384 3077 6.729690 TTTCTGAAGGACCATCAAAAACAT 57.270 33.333 0.35 0.00 0.00 2.71
2648 3368 1.004918 GTAGGTTCCTGTGCTGCGT 60.005 57.895 1.12 0.00 0.00 5.24
2738 3458 2.819608 TCAAGCTGAATAAGTGGTTGGC 59.180 45.455 0.00 0.00 38.99 4.52
2787 3531 1.202348 GCTTCAACAGGGGCAACATAC 59.798 52.381 0.00 0.00 39.74 2.39
2846 3590 2.031120 CCAAGTCAGACCAGCCAAAAA 58.969 47.619 0.00 0.00 0.00 1.94
3010 3757 5.869888 CCATTGAGTTGTAGGTGTTACTCTC 59.130 44.000 0.00 0.00 38.23 3.20
3123 4054 4.207165 CCGATACACAGGGGATTTGAATT 58.793 43.478 0.00 0.00 0.00 2.17
3232 4164 5.982391 TCCCAATCTCCCATAGTCTTATCT 58.018 41.667 0.00 0.00 0.00 1.98
3327 4262 3.618690 AGGGTCGATTCCAAAAGAGAG 57.381 47.619 9.87 0.00 0.00 3.20
3376 4317 6.834168 AAGACACCGGTTCATCATAAATTT 57.166 33.333 2.97 0.00 0.00 1.82
3377 4318 6.834168 AAAGACACCGGTTCATCATAAATT 57.166 33.333 2.97 0.00 0.00 1.82
3393 4341 9.683069 ATCAAAGTTGACAATTGATAAAGACAC 57.317 29.630 13.59 0.00 40.87 3.67
3404 4353 4.739716 GCAACGACATCAAAGTTGACAATT 59.260 37.500 11.15 0.00 45.66 2.32
3405 4354 4.036734 AGCAACGACATCAAAGTTGACAAT 59.963 37.500 11.15 0.00 45.66 2.71
3465 4414 6.944557 AACGCATAGGTTAAAGCAAAAATC 57.055 33.333 0.00 0.00 0.00 2.17
3467 4416 6.273825 TCAAACGCATAGGTTAAAGCAAAAA 58.726 32.000 0.00 0.00 0.00 1.94
3468 4417 5.833082 TCAAACGCATAGGTTAAAGCAAAA 58.167 33.333 0.00 0.00 0.00 2.44
3479 4428 4.494199 GGAAAAGACGATCAAACGCATAGG 60.494 45.833 0.00 0.00 36.70 2.57
3543 4493 2.281345 GCAGGCGGATGGATGGAG 60.281 66.667 0.00 0.00 0.00 3.86
3544 4494 2.769621 AGCAGGCGGATGGATGGA 60.770 61.111 0.00 0.00 0.00 3.41
3545 4495 2.281345 GAGCAGGCGGATGGATGG 60.281 66.667 0.00 0.00 0.00 3.51
3546 4496 2.281345 GGAGCAGGCGGATGGATG 60.281 66.667 0.00 0.00 0.00 3.51
3547 4497 3.933722 CGGAGCAGGCGGATGGAT 61.934 66.667 0.00 0.00 0.00 3.41
3549 4499 4.899239 GACGGAGCAGGCGGATGG 62.899 72.222 0.00 0.00 0.00 3.51
3550 4500 4.899239 GGACGGAGCAGGCGGATG 62.899 72.222 0.00 0.00 0.00 3.51
3554 4504 2.930385 ATTCATGGACGGAGCAGGCG 62.930 60.000 0.00 0.00 0.00 5.52
3555 4505 0.106708 TATTCATGGACGGAGCAGGC 59.893 55.000 0.00 0.00 0.00 4.85
3556 4506 2.158900 ACTTATTCATGGACGGAGCAGG 60.159 50.000 0.00 0.00 0.00 4.85
3557 4507 2.868583 CACTTATTCATGGACGGAGCAG 59.131 50.000 0.00 0.00 0.00 4.24
3558 4508 2.419990 CCACTTATTCATGGACGGAGCA 60.420 50.000 0.00 0.00 38.34 4.26
3559 4509 2.158957 TCCACTTATTCATGGACGGAGC 60.159 50.000 0.00 0.00 40.17 4.70
3560 4510 3.819564 TCCACTTATTCATGGACGGAG 57.180 47.619 0.00 0.00 40.17 4.63
3565 4515 8.548025 TCTAGATTTTGTCCACTTATTCATGGA 58.452 33.333 0.00 0.00 42.88 3.41
3566 4516 8.737168 TCTAGATTTTGTCCACTTATTCATGG 57.263 34.615 0.00 0.00 37.32 3.66
3568 4518 9.911788 ACATCTAGATTTTGTCCACTTATTCAT 57.088 29.630 1.33 0.00 0.00 2.57
3572 4522 9.601217 GTGTACATCTAGATTTTGTCCACTTAT 57.399 33.333 11.41 0.00 30.33 1.73
3573 4523 8.812972 AGTGTACATCTAGATTTTGTCCACTTA 58.187 33.333 14.19 0.00 37.28 2.24
3574 4524 7.680730 AGTGTACATCTAGATTTTGTCCACTT 58.319 34.615 14.19 3.54 37.28 3.16
3575 4525 7.246171 AGTGTACATCTAGATTTTGTCCACT 57.754 36.000 14.19 14.19 36.21 4.00
3576 4526 7.907214 AAGTGTACATCTAGATTTTGTCCAC 57.093 36.000 10.93 10.93 32.33 4.02
3580 4530 8.818057 GCGAATAAGTGTACATCTAGATTTTGT 58.182 33.333 1.33 2.40 0.00 2.83
3581 4531 7.998767 CGCGAATAAGTGTACATCTAGATTTTG 59.001 37.037 0.00 0.00 0.00 2.44
3582 4532 7.169308 CCGCGAATAAGTGTACATCTAGATTTT 59.831 37.037 8.23 0.00 0.00 1.82
3583 4533 6.641314 CCGCGAATAAGTGTACATCTAGATTT 59.359 38.462 8.23 0.00 0.00 2.17
3584 4534 6.016527 TCCGCGAATAAGTGTACATCTAGATT 60.017 38.462 8.23 2.73 0.00 2.40
3585 4535 5.472478 TCCGCGAATAAGTGTACATCTAGAT 59.528 40.000 8.23 0.00 0.00 1.98
3586 4536 4.818005 TCCGCGAATAAGTGTACATCTAGA 59.182 41.667 8.23 0.00 0.00 2.43
3587 4537 4.910456 GTCCGCGAATAAGTGTACATCTAG 59.090 45.833 8.23 0.00 0.00 2.43
3588 4538 4.553351 CGTCCGCGAATAAGTGTACATCTA 60.553 45.833 8.23 0.00 41.33 1.98
3589 4539 3.703420 GTCCGCGAATAAGTGTACATCT 58.297 45.455 8.23 0.00 0.00 2.90
3590 4540 2.466571 CGTCCGCGAATAAGTGTACATC 59.533 50.000 8.23 0.00 41.33 3.06
3591 4541 2.456989 CGTCCGCGAATAAGTGTACAT 58.543 47.619 8.23 0.00 41.33 2.29
3592 4542 1.467883 CCGTCCGCGAATAAGTGTACA 60.468 52.381 8.23 0.00 41.33 2.90
3593 4543 1.194495 CCGTCCGCGAATAAGTGTAC 58.806 55.000 8.23 0.00 41.33 2.90
3594 4544 1.064505 CTCCGTCCGCGAATAAGTGTA 59.935 52.381 8.23 0.00 41.33 2.90
3595 4545 0.179145 CTCCGTCCGCGAATAAGTGT 60.179 55.000 8.23 0.00 41.33 3.55
3596 4546 0.870307 CCTCCGTCCGCGAATAAGTG 60.870 60.000 8.23 0.00 41.33 3.16
3597 4547 1.436336 CCTCCGTCCGCGAATAAGT 59.564 57.895 8.23 0.00 41.33 2.24
3598 4548 1.299926 CCCTCCGTCCGCGAATAAG 60.300 63.158 8.23 0.00 41.33 1.73
3599 4549 1.731433 CTCCCTCCGTCCGCGAATAA 61.731 60.000 8.23 0.00 41.33 1.40
3600 4550 2.124193 TCCCTCCGTCCGCGAATA 60.124 61.111 8.23 0.00 41.33 1.75
3601 4551 2.898920 TACTCCCTCCGTCCGCGAAT 62.899 60.000 8.23 0.00 41.33 3.34
3602 4552 2.898920 ATACTCCCTCCGTCCGCGAA 62.899 60.000 8.23 0.00 41.33 4.70
3603 4553 3.411114 ATACTCCCTCCGTCCGCGA 62.411 63.158 8.23 0.00 41.33 5.87
3604 4554 2.905880 ATACTCCCTCCGTCCGCG 60.906 66.667 0.00 0.00 37.95 6.46
3605 4555 0.820891 TACATACTCCCTCCGTCCGC 60.821 60.000 0.00 0.00 0.00 5.54
3606 4556 1.811359 GATACATACTCCCTCCGTCCG 59.189 57.143 0.00 0.00 0.00 4.79
3607 4557 3.157750 AGATACATACTCCCTCCGTCC 57.842 52.381 0.00 0.00 0.00 4.79
3608 4558 6.837471 AATTAGATACATACTCCCTCCGTC 57.163 41.667 0.00 0.00 0.00 4.79
3609 4559 7.011382 AGAAATTAGATACATACTCCCTCCGT 58.989 38.462 0.00 0.00 0.00 4.69
3610 4560 7.176865 TCAGAAATTAGATACATACTCCCTCCG 59.823 40.741 0.00 0.00 0.00 4.63
3611 4561 8.423906 TCAGAAATTAGATACATACTCCCTCC 57.576 38.462 0.00 0.00 0.00 4.30
3612 4562 8.032451 GCTCAGAAATTAGATACATACTCCCTC 58.968 40.741 0.00 0.00 0.00 4.30
3613 4563 7.510685 TGCTCAGAAATTAGATACATACTCCCT 59.489 37.037 0.00 0.00 0.00 4.20
3614 4564 7.671302 TGCTCAGAAATTAGATACATACTCCC 58.329 38.462 0.00 0.00 0.00 4.30
3643 4593 8.950210 CAGGCGAATCCATATTTAACAGATAAT 58.050 33.333 0.00 0.00 37.29 1.28
3644 4594 7.390440 CCAGGCGAATCCATATTTAACAGATAA 59.610 37.037 0.00 0.00 37.29 1.75
3649 4599 3.568007 GCCAGGCGAATCCATATTTAACA 59.432 43.478 0.00 0.00 37.29 2.41
3712 4663 6.931840 GCCCATTCTTCTTAGGACTACATAAG 59.068 42.308 0.00 0.00 40.38 1.73
3747 4698 1.202348 GGGAGCCAAATTGACTTTCCG 59.798 52.381 0.00 0.00 0.00 4.30
3748 4699 1.202348 CGGGAGCCAAATTGACTTTCC 59.798 52.381 0.00 0.00 0.00 3.13
3749 4700 1.202348 CCGGGAGCCAAATTGACTTTC 59.798 52.381 0.00 0.00 0.00 2.62
3750 4701 1.256812 CCGGGAGCCAAATTGACTTT 58.743 50.000 0.00 0.00 0.00 2.66
3751 4702 0.611896 CCCGGGAGCCAAATTGACTT 60.612 55.000 18.48 0.00 0.00 3.01
3752 4703 1.000896 CCCGGGAGCCAAATTGACT 60.001 57.895 18.48 0.00 0.00 3.41
3753 4704 1.304134 ACCCGGGAGCCAAATTGAC 60.304 57.895 32.02 0.00 0.00 3.18
3754 4705 1.304052 CACCCGGGAGCCAAATTGA 60.304 57.895 32.02 0.00 0.00 2.57
3755 4706 3.005540 GCACCCGGGAGCCAAATTG 62.006 63.158 30.60 15.13 0.00 2.32
3756 4707 2.679996 GCACCCGGGAGCCAAATT 60.680 61.111 30.60 0.00 0.00 1.82
3757 4708 2.803593 AATGCACCCGGGAGCCAAAT 62.804 55.000 35.77 22.15 0.00 2.32
3758 4709 2.143575 TAATGCACCCGGGAGCCAAA 62.144 55.000 35.77 20.89 0.00 3.28
3759 4710 2.550699 CTAATGCACCCGGGAGCCAA 62.551 60.000 35.77 21.62 0.00 4.52
3760 4711 3.012119 TAATGCACCCGGGAGCCA 61.012 61.111 35.77 24.84 0.00 4.75
3761 4712 2.203209 CTAATGCACCCGGGAGCC 60.203 66.667 35.77 20.40 0.00 4.70
3762 4713 2.902343 GCTAATGCACCCGGGAGC 60.902 66.667 33.35 33.35 39.41 4.70
3763 4714 2.589540 TGCTAATGCACCCGGGAG 59.410 61.111 32.02 22.90 45.31 4.30
3773 4724 2.927201 AATGGCCCCGGGTGCTAATG 62.927 60.000 26.69 9.74 0.00 1.90
3774 4725 2.236959 AAATGGCCCCGGGTGCTAAT 62.237 55.000 26.69 19.43 0.00 1.73
3775 4726 2.448473 AAAATGGCCCCGGGTGCTAA 62.448 55.000 26.69 18.35 0.00 3.09
3776 4727 2.448473 AAAAATGGCCCCGGGTGCTA 62.448 55.000 26.69 23.26 0.00 3.49
3777 4728 3.844562 AAAAATGGCCCCGGGTGCT 62.845 57.895 26.69 10.90 0.00 4.40
3778 4729 3.318384 AAAAATGGCCCCGGGTGC 61.318 61.111 21.85 21.86 0.00 5.01
3845 4796 9.674068 TTTACAGGTAGCATTTGTATATGACAA 57.326 29.630 0.00 0.00 46.56 3.18
3846 4797 9.845740 ATTTACAGGTAGCATTTGTATATGACA 57.154 29.630 0.00 0.00 35.78 3.58
3853 4804 9.290988 TCTCAAAATTTACAGGTAGCATTTGTA 57.709 29.630 0.00 0.00 0.00 2.41
3854 4805 8.082242 GTCTCAAAATTTACAGGTAGCATTTGT 58.918 33.333 0.00 0.00 0.00 2.83
3855 4806 8.081633 TGTCTCAAAATTTACAGGTAGCATTTG 58.918 33.333 0.00 0.00 0.00 2.32
3856 4807 8.177119 TGTCTCAAAATTTACAGGTAGCATTT 57.823 30.769 0.00 0.00 0.00 2.32
3857 4808 7.759489 TGTCTCAAAATTTACAGGTAGCATT 57.241 32.000 0.00 0.00 0.00 3.56
3858 4809 7.759489 TTGTCTCAAAATTTACAGGTAGCAT 57.241 32.000 0.00 0.00 0.00 3.79
3859 4810 7.575414 TTTGTCTCAAAATTTACAGGTAGCA 57.425 32.000 0.00 0.00 0.00 3.49
3860 4811 8.865590 TTTTTGTCTCAAAATTTACAGGTAGC 57.134 30.769 8.18 0.00 0.00 3.58
3882 4833 5.234116 CGCAGGTCAAAATGCTTAACTTTTT 59.766 36.000 0.00 0.00 40.34 1.94
3883 4834 4.744631 CGCAGGTCAAAATGCTTAACTTTT 59.255 37.500 0.00 0.00 40.34 2.27
3884 4835 4.298332 CGCAGGTCAAAATGCTTAACTTT 58.702 39.130 0.00 0.00 40.34 2.66
3885 4836 3.857010 GCGCAGGTCAAAATGCTTAACTT 60.857 43.478 0.30 0.00 40.34 2.66
3886 4837 2.351738 GCGCAGGTCAAAATGCTTAACT 60.352 45.455 0.30 0.00 40.34 2.24
3887 4838 1.985684 GCGCAGGTCAAAATGCTTAAC 59.014 47.619 0.30 0.00 40.34 2.01
3888 4839 1.611006 TGCGCAGGTCAAAATGCTTAA 59.389 42.857 5.66 0.00 40.34 1.85
3889 4840 1.242989 TGCGCAGGTCAAAATGCTTA 58.757 45.000 5.66 0.00 40.34 3.09
3890 4841 0.388659 TTGCGCAGGTCAAAATGCTT 59.611 45.000 11.31 0.00 40.34 3.91
3891 4842 0.388659 TTTGCGCAGGTCAAAATGCT 59.611 45.000 11.31 0.00 40.34 3.79
3892 4843 1.216122 TTTTGCGCAGGTCAAAATGC 58.784 45.000 11.31 0.00 38.17 3.56
3915 4866 4.821260 GGTGACATTTGGCCTTTGATTTTT 59.179 37.500 3.32 0.00 0.00 1.94
3916 4867 4.388485 GGTGACATTTGGCCTTTGATTTT 58.612 39.130 3.32 0.00 0.00 1.82
3917 4868 3.244526 GGGTGACATTTGGCCTTTGATTT 60.245 43.478 3.32 0.00 0.00 2.17
3918 4869 2.302733 GGGTGACATTTGGCCTTTGATT 59.697 45.455 3.32 0.00 0.00 2.57
3919 4870 1.901833 GGGTGACATTTGGCCTTTGAT 59.098 47.619 3.32 0.00 0.00 2.57
3920 4871 1.337118 GGGTGACATTTGGCCTTTGA 58.663 50.000 3.32 0.00 0.00 2.69
3921 4872 0.321346 GGGGTGACATTTGGCCTTTG 59.679 55.000 3.32 0.95 0.00 2.77
3922 4873 0.105246 TGGGGTGACATTTGGCCTTT 60.105 50.000 3.32 0.00 0.00 3.11
3923 4874 0.105246 TTGGGGTGACATTTGGCCTT 60.105 50.000 3.32 0.00 0.00 4.35
3924 4875 0.105246 TTTGGGGTGACATTTGGCCT 60.105 50.000 3.32 0.00 0.00 5.19
3925 4876 0.761802 TTTTGGGGTGACATTTGGCC 59.238 50.000 0.00 0.00 0.00 5.36
3926 4877 2.224499 ACATTTTGGGGTGACATTTGGC 60.224 45.455 0.00 0.00 0.00 4.52
3927 4878 3.070734 TGACATTTTGGGGTGACATTTGG 59.929 43.478 0.00 0.00 0.00 3.28
3928 4879 4.057432 GTGACATTTTGGGGTGACATTTG 58.943 43.478 0.00 0.00 0.00 2.32
3929 4880 3.070878 GGTGACATTTTGGGGTGACATTT 59.929 43.478 0.00 0.00 0.00 2.32
3930 4881 2.632512 GGTGACATTTTGGGGTGACATT 59.367 45.455 0.00 0.00 0.00 2.71
3931 4882 2.247358 GGTGACATTTTGGGGTGACAT 58.753 47.619 0.00 0.00 0.00 3.06
3932 4883 1.063642 TGGTGACATTTTGGGGTGACA 60.064 47.619 0.00 0.00 33.40 3.58
3933 4884 1.698506 TGGTGACATTTTGGGGTGAC 58.301 50.000 0.00 0.00 33.40 3.67
3934 4885 2.461300 TTGGTGACATTTTGGGGTGA 57.539 45.000 0.00 0.00 42.32 4.02
3935 4886 3.550437 TTTTGGTGACATTTTGGGGTG 57.450 42.857 0.00 0.00 42.32 4.61
3936 4887 4.787135 AATTTTGGTGACATTTTGGGGT 57.213 36.364 0.00 0.00 42.32 4.95
3937 4888 7.757941 AATAAATTTTGGTGACATTTTGGGG 57.242 32.000 0.00 0.00 42.32 4.96
3962 4913 1.062294 CGGTGTTTCGTCGGTGAAAAA 59.938 47.619 4.86 0.00 39.40 1.94
3963 4914 0.651551 CGGTGTTTCGTCGGTGAAAA 59.348 50.000 4.86 0.00 39.40 2.29
3964 4915 1.764180 GCGGTGTTTCGTCGGTGAAA 61.764 55.000 0.00 0.00 35.58 2.69
3965 4916 2.239124 GCGGTGTTTCGTCGGTGAA 61.239 57.895 0.00 0.00 0.00 3.18
3966 4917 2.659244 GCGGTGTTTCGTCGGTGA 60.659 61.111 0.00 0.00 0.00 4.02
3967 4918 2.660552 AGCGGTGTTTCGTCGGTG 60.661 61.111 0.00 0.00 33.28 4.94
3968 4919 2.660552 CAGCGGTGTTTCGTCGGT 60.661 61.111 6.41 0.00 34.90 4.69
3969 4920 4.072088 GCAGCGGTGTTTCGTCGG 62.072 66.667 17.07 0.00 0.00 4.79
3970 4921 3.000080 GAGCAGCGGTGTTTCGTCG 62.000 63.158 17.07 0.00 0.00 5.12
3971 4922 2.668280 GGAGCAGCGGTGTTTCGTC 61.668 63.158 17.07 5.62 0.00 4.20
3972 4923 2.665185 GGAGCAGCGGTGTTTCGT 60.665 61.111 17.07 0.00 0.00 3.85
3973 4924 3.777925 CGGAGCAGCGGTGTTTCG 61.778 66.667 17.60 17.60 28.62 3.46
3974 4925 2.171489 GAACGGAGCAGCGGTGTTTC 62.171 60.000 17.07 8.22 0.00 2.78
3975 4926 2.203153 AACGGAGCAGCGGTGTTT 60.203 55.556 17.07 4.91 0.00 2.83
3976 4927 2.665185 GAACGGAGCAGCGGTGTT 60.665 61.111 17.07 10.65 0.00 3.32
3977 4928 4.681978 GGAACGGAGCAGCGGTGT 62.682 66.667 17.07 2.78 0.00 4.16
3990 4941 3.121778 GCTTGTCAAATTTCATGCGGAAC 59.878 43.478 0.00 0.00 34.56 3.62
3991 4942 3.243670 TGCTTGTCAAATTTCATGCGGAA 60.244 39.130 10.97 0.00 37.48 4.30
3992 4943 2.295629 TGCTTGTCAAATTTCATGCGGA 59.704 40.909 10.97 0.00 37.48 5.54
3993 4944 2.674954 TGCTTGTCAAATTTCATGCGG 58.325 42.857 10.97 0.00 37.48 5.69
3994 4945 3.676172 ACATGCTTGTCAAATTTCATGCG 59.324 39.130 12.67 4.28 37.48 4.73
3995 4946 5.600908 AACATGCTTGTCAAATTTCATGC 57.399 34.783 5.61 11.08 35.89 4.06
3996 4947 5.849081 GCAAACATGCTTGTCAAATTTCATG 59.151 36.000 10.38 11.64 34.06 3.07
3997 4948 5.761234 AGCAAACATGCTTGTCAAATTTCAT 59.239 32.000 10.38 0.00 43.52 2.57
3998 4949 5.117584 AGCAAACATGCTTGTCAAATTTCA 58.882 33.333 10.38 0.00 43.52 2.69
3999 4950 5.662211 AGCAAACATGCTTGTCAAATTTC 57.338 34.783 10.38 0.00 43.52 2.17
4000 4951 6.018832 GTGTAGCAAACATGCTTGTCAAATTT 60.019 34.615 8.79 0.00 43.52 1.82
4001 4952 5.463061 GTGTAGCAAACATGCTTGTCAAATT 59.537 36.000 8.79 0.00 43.52 1.82
4002 4953 4.984161 GTGTAGCAAACATGCTTGTCAAAT 59.016 37.500 8.79 0.00 43.52 2.32
4003 4954 4.358851 GTGTAGCAAACATGCTTGTCAAA 58.641 39.130 8.79 0.00 43.52 2.69
4004 4955 3.243367 GGTGTAGCAAACATGCTTGTCAA 60.243 43.478 8.79 0.00 43.52 3.18
4005 4956 2.293122 GGTGTAGCAAACATGCTTGTCA 59.707 45.455 8.79 5.38 43.52 3.58
4006 4957 2.293122 TGGTGTAGCAAACATGCTTGTC 59.707 45.455 8.79 3.48 43.52 3.18
4007 4958 2.305928 TGGTGTAGCAAACATGCTTGT 58.694 42.857 8.79 0.00 43.52 3.16
4008 4959 3.052036 GTTGGTGTAGCAAACATGCTTG 58.948 45.455 8.79 4.42 43.52 4.01
4009 4960 2.692557 TGTTGGTGTAGCAAACATGCTT 59.307 40.909 8.79 0.00 43.52 3.91
4010 4961 2.892852 ATGTTGGTGTAGCAAACATGCT 59.107 40.909 8.53 8.53 46.87 3.79
4011 4962 2.791383 TGTTGGTGTAGCAAACATGC 57.209 45.000 0.00 0.00 41.10 4.06
4014 4965 4.140536 TGATCATGTTGGTGTAGCAAACA 58.859 39.130 0.00 0.81 44.41 2.83
4015 4966 4.764679 TGATCATGTTGGTGTAGCAAAC 57.235 40.909 0.00 0.00 0.00 2.93
4016 4967 5.255687 AGATGATCATGTTGGTGTAGCAAA 58.744 37.500 14.30 0.00 0.00 3.68
4017 4968 4.847198 AGATGATCATGTTGGTGTAGCAA 58.153 39.130 14.30 0.00 0.00 3.91
4018 4969 4.492494 AGATGATCATGTTGGTGTAGCA 57.508 40.909 14.30 0.00 0.00 3.49
4019 4970 5.359756 TGTAGATGATCATGTTGGTGTAGC 58.640 41.667 14.30 0.00 0.00 3.58
4020 4971 7.848223 TTTGTAGATGATCATGTTGGTGTAG 57.152 36.000 14.30 0.00 0.00 2.74
4021 4972 8.628630 TTTTTGTAGATGATCATGTTGGTGTA 57.371 30.769 14.30 0.00 0.00 2.90
4022 4973 7.523293 TTTTTGTAGATGATCATGTTGGTGT 57.477 32.000 14.30 0.00 0.00 4.16
4061 5012 9.688091 ACAGTACCCCAAAAATTTAAATGTTTT 57.312 25.926 12.76 12.20 0.00 2.43
4062 5013 9.688091 AACAGTACCCCAAAAATTTAAATGTTT 57.312 25.926 10.08 10.08 0.00 2.83
4063 5014 9.332502 GAACAGTACCCCAAAAATTTAAATGTT 57.667 29.630 0.39 0.00 0.00 2.71
4064 5015 8.487028 TGAACAGTACCCCAAAAATTTAAATGT 58.513 29.630 0.39 0.00 0.00 2.71
4065 5016 8.894768 TGAACAGTACCCCAAAAATTTAAATG 57.105 30.769 0.39 0.00 0.00 2.32
4066 5017 9.719355 GATGAACAGTACCCCAAAAATTTAAAT 57.281 29.630 0.00 0.00 0.00 1.40
4067 5018 8.151596 GGATGAACAGTACCCCAAAAATTTAAA 58.848 33.333 0.00 0.00 0.00 1.52
4068 5019 7.524038 CGGATGAACAGTACCCCAAAAATTTAA 60.524 37.037 0.00 0.00 0.00 1.52
4069 5020 6.071840 CGGATGAACAGTACCCCAAAAATTTA 60.072 38.462 0.00 0.00 0.00 1.40
4070 5021 5.279256 CGGATGAACAGTACCCCAAAAATTT 60.279 40.000 0.00 0.00 0.00 1.82
4071 5022 4.219725 CGGATGAACAGTACCCCAAAAATT 59.780 41.667 0.00 0.00 0.00 1.82
4072 5023 3.761752 CGGATGAACAGTACCCCAAAAAT 59.238 43.478 0.00 0.00 0.00 1.82
4073 5024 3.150767 CGGATGAACAGTACCCCAAAAA 58.849 45.455 0.00 0.00 0.00 1.94
4074 5025 2.553466 CCGGATGAACAGTACCCCAAAA 60.553 50.000 0.00 0.00 0.00 2.44
4075 5026 1.003812 CCGGATGAACAGTACCCCAAA 59.996 52.381 0.00 0.00 0.00 3.28
4076 5027 0.616371 CCGGATGAACAGTACCCCAA 59.384 55.000 0.00 0.00 0.00 4.12
4077 5028 1.268992 CCCGGATGAACAGTACCCCA 61.269 60.000 0.73 0.00 0.00 4.96
4078 5029 1.269703 ACCCGGATGAACAGTACCCC 61.270 60.000 0.73 0.00 0.00 4.95
4079 5030 0.107848 CACCCGGATGAACAGTACCC 60.108 60.000 0.73 0.00 0.00 3.69
4080 5031 0.743345 GCACCCGGATGAACAGTACC 60.743 60.000 0.00 0.00 0.00 3.34
4081 5032 0.036765 TGCACCCGGATGAACAGTAC 60.037 55.000 0.00 0.00 0.00 2.73
4082 5033 0.687920 TTGCACCCGGATGAACAGTA 59.312 50.000 0.00 0.00 0.00 2.74
4083 5034 0.179004 TTTGCACCCGGATGAACAGT 60.179 50.000 0.00 0.00 0.00 3.55
4084 5035 1.135315 CATTTGCACCCGGATGAACAG 60.135 52.381 0.00 0.00 0.00 3.16
4085 5036 0.887247 CATTTGCACCCGGATGAACA 59.113 50.000 0.00 0.00 0.00 3.18
4086 5037 0.458370 GCATTTGCACCCGGATGAAC 60.458 55.000 0.00 0.00 41.59 3.18
4087 5038 1.889454 GCATTTGCACCCGGATGAA 59.111 52.632 0.00 0.00 41.59 2.57
4088 5039 3.602103 GCATTTGCACCCGGATGA 58.398 55.556 0.00 0.00 41.59 2.92
4098 5049 4.133796 GCTCCCGGGTGCATTTGC 62.134 66.667 36.48 18.75 42.50 3.68
4099 5050 3.451894 GGCTCCCGGGTGCATTTG 61.452 66.667 39.91 16.27 36.47 2.32
4100 5051 3.521765 TTGGCTCCCGGGTGCATTT 62.522 57.895 39.91 0.00 36.47 2.32
4101 5052 3.521765 TTTGGCTCCCGGGTGCATT 62.522 57.895 39.91 0.00 36.47 3.56
4102 5053 3.521765 TTTTGGCTCCCGGGTGCAT 62.522 57.895 39.91 0.00 36.47 3.96
4103 5054 4.211330 TTTTGGCTCCCGGGTGCA 62.211 61.111 39.91 26.58 36.47 4.57
4104 5055 3.680786 GTTTTGGCTCCCGGGTGC 61.681 66.667 34.54 34.54 0.00 5.01
4105 5056 3.361977 CGTTTTGGCTCCCGGGTG 61.362 66.667 22.86 20.53 0.00 4.61
4114 5065 1.079888 CATCCCAAGGCGTTTTGGC 60.080 57.895 12.80 0.00 45.07 4.52
4115 5066 0.965439 TTCATCCCAAGGCGTTTTGG 59.035 50.000 11.66 11.66 45.83 3.28
4116 5067 1.885887 TCTTCATCCCAAGGCGTTTTG 59.114 47.619 0.00 0.00 0.00 2.44
4117 5068 1.886542 GTCTTCATCCCAAGGCGTTTT 59.113 47.619 0.00 0.00 0.00 2.43
4118 5069 1.073923 AGTCTTCATCCCAAGGCGTTT 59.926 47.619 0.00 0.00 32.89 3.60
4119 5070 0.693049 AGTCTTCATCCCAAGGCGTT 59.307 50.000 0.00 0.00 32.89 4.84
4120 5071 1.568504 TAGTCTTCATCCCAAGGCGT 58.431 50.000 0.00 0.00 32.89 5.68
4121 5072 2.918712 ATAGTCTTCATCCCAAGGCG 57.081 50.000 0.00 0.00 32.89 5.52
4122 5073 7.588497 AAAATTATAGTCTTCATCCCAAGGC 57.412 36.000 0.00 0.00 0.00 4.35
4123 5074 9.067986 GGTAAAATTATAGTCTTCATCCCAAGG 57.932 37.037 0.00 0.00 0.00 3.61
4124 5075 9.853177 AGGTAAAATTATAGTCTTCATCCCAAG 57.147 33.333 0.00 0.00 0.00 3.61
4125 5076 9.847224 GAGGTAAAATTATAGTCTTCATCCCAA 57.153 33.333 0.00 0.00 0.00 4.12
4126 5077 8.437575 GGAGGTAAAATTATAGTCTTCATCCCA 58.562 37.037 0.00 0.00 0.00 4.37
4127 5078 8.437575 TGGAGGTAAAATTATAGTCTTCATCCC 58.562 37.037 0.00 0.00 0.00 3.85
4141 5092 8.096414 CCACAAATGAAAGATGGAGGTAAAATT 58.904 33.333 0.00 0.00 31.69 1.82
4142 5093 7.235399 ACCACAAATGAAAGATGGAGGTAAAAT 59.765 33.333 0.00 0.00 34.38 1.82
4143 5094 6.553100 ACCACAAATGAAAGATGGAGGTAAAA 59.447 34.615 0.00 0.00 34.38 1.52
4144 5095 6.074648 ACCACAAATGAAAGATGGAGGTAAA 58.925 36.000 0.00 0.00 34.38 2.01
4145 5096 5.640147 ACCACAAATGAAAGATGGAGGTAA 58.360 37.500 0.00 0.00 34.38 2.85
4146 5097 5.255397 ACCACAAATGAAAGATGGAGGTA 57.745 39.130 0.00 0.00 34.38 3.08
4147 5098 4.118168 ACCACAAATGAAAGATGGAGGT 57.882 40.909 0.00 0.00 34.38 3.85
4148 5099 5.300286 GGATACCACAAATGAAAGATGGAGG 59.700 44.000 0.00 0.00 34.38 4.30
4149 5100 5.887598 TGGATACCACAAATGAAAGATGGAG 59.112 40.000 0.00 0.00 34.38 3.86
4150 5101 5.825532 TGGATACCACAAATGAAAGATGGA 58.174 37.500 0.00 0.00 34.38 3.41
4151 5102 6.548622 AGATGGATACCACAAATGAAAGATGG 59.451 38.462 0.00 0.00 35.80 3.51
4152 5103 7.578310 AGATGGATACCACAAATGAAAGATG 57.422 36.000 0.00 0.00 35.80 2.90
4153 5104 7.835682 TGAAGATGGATACCACAAATGAAAGAT 59.164 33.333 0.00 0.00 35.80 2.40
4154 5105 7.121168 GTGAAGATGGATACCACAAATGAAAGA 59.879 37.037 0.00 0.00 35.80 2.52
4155 5106 7.094248 TGTGAAGATGGATACCACAAATGAAAG 60.094 37.037 0.00 0.00 35.80 2.62
4156 5107 6.718912 TGTGAAGATGGATACCACAAATGAAA 59.281 34.615 0.00 0.00 35.80 2.69
4157 5108 6.150976 GTGTGAAGATGGATACCACAAATGAA 59.849 38.462 0.00 0.00 39.13 2.57
4158 5109 5.647658 GTGTGAAGATGGATACCACAAATGA 59.352 40.000 0.00 0.00 39.13 2.57
4159 5110 5.447683 CGTGTGAAGATGGATACCACAAATG 60.448 44.000 0.00 0.00 39.13 2.32
4160 5111 4.635765 CGTGTGAAGATGGATACCACAAAT 59.364 41.667 0.00 0.00 39.13 2.32
4161 5112 4.000325 CGTGTGAAGATGGATACCACAAA 59.000 43.478 0.00 0.00 39.13 2.83
4162 5113 3.259625 TCGTGTGAAGATGGATACCACAA 59.740 43.478 0.00 0.00 39.13 3.33
4163 5114 2.829120 TCGTGTGAAGATGGATACCACA 59.171 45.455 0.00 0.00 35.80 4.17
4164 5115 3.119101 ACTCGTGTGAAGATGGATACCAC 60.119 47.826 0.00 0.00 35.80 4.16
4165 5116 3.096852 ACTCGTGTGAAGATGGATACCA 58.903 45.455 0.00 0.00 38.19 3.25
4166 5117 3.119101 ACACTCGTGTGAAGATGGATACC 60.119 47.826 23.32 0.00 46.55 2.73
4167 5118 4.111375 ACACTCGTGTGAAGATGGATAC 57.889 45.455 23.32 0.00 46.55 2.24
4168 5119 4.948004 AGTACACTCGTGTGAAGATGGATA 59.052 41.667 23.32 0.87 46.55 2.59
4169 5120 3.764434 AGTACACTCGTGTGAAGATGGAT 59.236 43.478 23.32 1.82 46.55 3.41
4170 5121 3.154710 AGTACACTCGTGTGAAGATGGA 58.845 45.455 23.32 0.00 46.55 3.41
4171 5122 3.577649 AGTACACTCGTGTGAAGATGG 57.422 47.619 23.32 0.00 46.55 3.51
4172 5123 5.298197 AGTAGTACACTCGTGTGAAGATG 57.702 43.478 23.32 0.00 46.55 2.90
4173 5124 5.961396 AAGTAGTACACTCGTGTGAAGAT 57.039 39.130 23.32 9.05 46.55 2.40
4174 5125 5.297527 TCAAAGTAGTACACTCGTGTGAAGA 59.702 40.000 23.32 6.14 46.55 2.87
4175 5126 5.398711 GTCAAAGTAGTACACTCGTGTGAAG 59.601 44.000 23.32 0.00 46.55 3.02
4176 5127 5.276270 GTCAAAGTAGTACACTCGTGTGAA 58.724 41.667 23.32 4.02 46.55 3.18
4177 5128 4.553351 CGTCAAAGTAGTACACTCGTGTGA 60.553 45.833 23.32 5.29 46.55 3.58
4179 5130 3.304257 CCGTCAAAGTAGTACACTCGTGT 60.304 47.826 7.91 7.91 46.87 4.49
4180 5131 3.231965 CCGTCAAAGTAGTACACTCGTG 58.768 50.000 2.52 0.00 36.04 4.35
4181 5132 2.880890 ACCGTCAAAGTAGTACACTCGT 59.119 45.455 2.52 0.00 36.04 4.18
4182 5133 3.549299 ACCGTCAAAGTAGTACACTCG 57.451 47.619 2.52 0.57 36.04 4.18
4183 5134 6.072783 ACTCTTACCGTCAAAGTAGTACACTC 60.073 42.308 2.52 0.00 36.04 3.51
4184 5135 5.767168 ACTCTTACCGTCAAAGTAGTACACT 59.233 40.000 2.52 0.00 40.05 3.55
4185 5136 6.006759 ACTCTTACCGTCAAAGTAGTACAC 57.993 41.667 2.52 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.