Multiple sequence alignment - TraesCS7D01G365000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G365000 chr7D 100.000 4437 0 0 1 4437 471329078 471324642 0.000000e+00 8194.0
1 TraesCS7D01G365000 chr7D 95.732 328 13 1 1978 2304 305327250 305327577 1.090000e-145 527.0
2 TraesCS7D01G365000 chr7B 95.466 1522 53 5 2309 3821 495203253 495201739 0.000000e+00 2414.0
3 TraesCS7D01G365000 chr7B 91.069 1254 57 13 472 1715 495204529 495203321 0.000000e+00 1644.0
4 TraesCS7D01G365000 chr7B 82.775 418 64 8 26 438 495205320 495204906 2.520000e-97 366.0
5 TraesCS7D01G365000 chr7B 87.413 286 35 1 4147 4432 495196386 495196102 1.190000e-85 327.0
6 TraesCS7D01G365000 chr7B 84.969 326 29 10 3808 4130 495196788 495196480 3.330000e-81 313.0
7 TraesCS7D01G365000 chr7A 90.256 1560 79 39 447 1979 526363757 526365270 0.000000e+00 1971.0
8 TraesCS7D01G365000 chr7A 91.038 1339 51 29 2301 3610 526365269 526366567 0.000000e+00 1744.0
9 TraesCS7D01G365000 chr3D 96.341 328 11 1 1978 2304 151107317 151107644 5.050000e-149 538.0
10 TraesCS7D01G365000 chr3D 96.341 328 11 1 1978 2304 252398170 252398497 5.050000e-149 538.0
11 TraesCS7D01G365000 chr3D 96.341 328 11 1 1978 2304 307003243 307003570 5.050000e-149 538.0
12 TraesCS7D01G365000 chr3D 95.732 328 13 1 1978 2304 101299954 101300281 1.090000e-145 527.0
13 TraesCS7D01G365000 chr2D 96.049 329 10 2 1977 2302 317105834 317105506 2.350000e-147 532.0
14 TraesCS7D01G365000 chr2D 95.468 331 13 2 1978 2306 252135158 252135488 1.090000e-145 527.0
15 TraesCS7D01G365000 chr2D 95.732 328 12 2 1978 2304 382086234 382086560 1.090000e-145 527.0
16 TraesCS7D01G365000 chr6D 95.732 328 13 1 1978 2304 129021076 129021403 1.090000e-145 527.0
17 TraesCS7D01G365000 chr6D 79.720 143 15 10 1159 1294 457473204 457473069 1.700000e-14 91.6
18 TraesCS7D01G365000 chr6D 80.909 110 10 8 1159 1264 457347085 457346983 4.760000e-10 76.8
19 TraesCS7D01G365000 chr1A 82.877 146 20 4 1166 1310 529664361 529664502 4.660000e-25 126.0
20 TraesCS7D01G365000 chr6B 82.353 102 11 6 1159 1258 695937084 695937180 1.020000e-11 82.4
21 TraesCS7D01G365000 chr6A 82.353 102 11 6 1159 1258 604294924 604295020 1.020000e-11 82.4
22 TraesCS7D01G365000 chr6A 82.353 102 11 6 1159 1258 604384730 604384826 1.020000e-11 82.4
23 TraesCS7D01G365000 chr5A 81.481 108 13 6 1159 1264 531241041 531240939 1.020000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G365000 chr7D 471324642 471329078 4436 True 8194.000000 8194 100.000 1 4437 1 chr7D.!!$R1 4436
1 TraesCS7D01G365000 chr7B 495201739 495205320 3581 True 1474.666667 2414 89.770 26 3821 3 chr7B.!!$R2 3795
2 TraesCS7D01G365000 chr7B 495196102 495196788 686 True 320.000000 327 86.191 3808 4432 2 chr7B.!!$R1 624
3 TraesCS7D01G365000 chr7A 526363757 526366567 2810 False 1857.500000 1971 90.647 447 3610 2 chr7A.!!$F1 3163

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
242 244 0.036765 TCCGGACCTCACCAATTTCG 60.037 55.0 0.0 0.00 0.00 3.46 F
430 788 0.107508 CCGTGCAGACATGAGGGAAT 60.108 55.0 0.0 0.00 34.49 3.01 F
1598 1983 0.111089 CGTGTTCGAGCTTCAACTGC 60.111 55.0 0.0 3.39 39.71 4.40 F
1992 2384 0.976073 TGGCTACTCCCTCCTTTCCG 60.976 60.0 0.0 0.00 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1629 2016 1.075542 CTTTTAGGATGCGTGCACGA 58.924 50.000 41.19 25.87 43.02 4.35 R
2230 2622 1.078823 AGGTAGATGGTGAGTGGTGGA 59.921 52.381 0.00 0.00 0.00 4.02 R
2515 2907 0.257039 CCTGGCTGTATTTCTGGGCT 59.743 55.000 0.00 0.00 0.00 5.19 R
3917 4346 0.104855 GCTATGTGGCGTCCATCTGA 59.895 55.000 1.90 0.00 35.28 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.757917 AGGAGAGGGAGCAGCGAC 60.758 66.667 0.00 0.00 0.00 5.19
18 19 3.071206 GGAGAGGGAGCAGCGACA 61.071 66.667 0.00 0.00 0.00 4.35
19 20 2.650116 GGAGAGGGAGCAGCGACAA 61.650 63.158 0.00 0.00 0.00 3.18
20 21 1.293498 GAGAGGGAGCAGCGACAAA 59.707 57.895 0.00 0.00 0.00 2.83
21 22 1.004440 AGAGGGAGCAGCGACAAAC 60.004 57.895 0.00 0.00 0.00 2.93
22 23 2.357517 AGGGAGCAGCGACAAACG 60.358 61.111 0.00 0.00 45.66 3.60
23 24 2.357034 GGGAGCAGCGACAAACGA 60.357 61.111 0.00 0.00 45.77 3.85
24 25 2.383527 GGGAGCAGCGACAAACGAG 61.384 63.158 0.00 0.00 45.77 4.18
29 30 1.347817 GCAGCGACAAACGAGAGGAG 61.348 60.000 0.00 0.00 45.77 3.69
39 40 2.695970 CGAGAGGAGGAGGAGGGGT 61.696 68.421 0.00 0.00 0.00 4.95
44 45 2.088709 AGAGGAGGAGGAGGGGTATAGA 60.089 54.545 0.00 0.00 0.00 1.98
50 51 2.225167 GGAGGAGGGGTATAGAGACAGG 60.225 59.091 0.00 0.00 0.00 4.00
60 61 4.021016 GGTATAGAGACAGGGCTATGGTTG 60.021 50.000 0.00 0.00 0.00 3.77
86 87 2.016318 TCGTCCGACTTAAATAGCCGA 58.984 47.619 0.00 0.00 30.47 5.54
92 93 6.345565 CGTCCGACTTAAATAGCCGAATTTAG 60.346 42.308 0.00 0.00 33.90 1.85
98 99 3.595190 AATAGCCGAATTTAGCCCCTT 57.405 42.857 0.00 0.00 0.00 3.95
113 114 4.641645 CTTGGGCGGCACACCAGA 62.642 66.667 3.37 0.00 36.40 3.86
114 115 4.947147 TTGGGCGGCACACCAGAC 62.947 66.667 3.37 0.00 36.40 3.51
135 137 1.815003 CGCCATGAATGCGTCCTCA 60.815 57.895 6.66 0.00 46.59 3.86
137 139 0.745845 GCCATGAATGCGTCCTCACT 60.746 55.000 0.00 0.00 0.00 3.41
155 157 0.389757 CTAAACTAGAGGAGGCGCCC 59.610 60.000 26.15 15.07 37.37 6.13
175 177 0.248215 GGCGAATGCATGACTTTCCG 60.248 55.000 0.00 0.00 45.35 4.30
176 178 0.863119 GCGAATGCATGACTTTCCGC 60.863 55.000 0.00 3.78 42.15 5.54
178 180 0.447801 GAATGCATGACTTTCCGCGT 59.552 50.000 4.92 0.00 0.00 6.01
196 198 0.827368 GTGGGTCCCTCTCATCAGTC 59.173 60.000 10.00 0.00 0.00 3.51
206 208 3.055602 CCTCTCATCAGTCCAATGTGACA 60.056 47.826 0.00 0.00 37.73 3.58
208 210 3.055602 TCTCATCAGTCCAATGTGACAGG 60.056 47.826 0.00 0.00 37.73 4.00
233 235 3.708210 GGACACATCCGGACCTCA 58.292 61.111 6.12 0.00 34.48 3.86
234 236 1.218316 GGACACATCCGGACCTCAC 59.782 63.158 6.12 0.00 34.48 3.51
237 239 1.125093 ACACATCCGGACCTCACCAA 61.125 55.000 6.12 0.00 0.00 3.67
242 244 0.036765 TCCGGACCTCACCAATTTCG 60.037 55.000 0.00 0.00 0.00 3.46
248 250 2.484264 GACCTCACCAATTTCGTTCCAG 59.516 50.000 0.00 0.00 0.00 3.86
251 253 3.127548 CCTCACCAATTTCGTTCCAGATG 59.872 47.826 0.00 0.00 0.00 2.90
256 258 3.753272 CCAATTTCGTTCCAGATGTGAGT 59.247 43.478 0.00 0.00 0.00 3.41
267 269 3.496692 CCAGATGTGAGTTGGGTTTGAGA 60.497 47.826 0.00 0.00 0.00 3.27
277 279 0.322546 GGGTTTGAGAAGTGCGGGAT 60.323 55.000 0.00 0.00 0.00 3.85
279 281 2.280628 GGTTTGAGAAGTGCGGGATAG 58.719 52.381 0.00 0.00 0.00 2.08
281 283 0.178068 TTGAGAAGTGCGGGATAGCC 59.822 55.000 0.00 0.00 36.02 3.93
298 300 4.664062 CCACACTTATGGGGCTGG 57.336 61.111 0.00 0.00 44.46 4.85
367 369 2.711009 CCATATAGGGCCAGTTTGAGGA 59.289 50.000 6.18 0.00 0.00 3.71
368 370 3.244700 CCATATAGGGCCAGTTTGAGGAG 60.245 52.174 6.18 0.00 0.00 3.69
369 371 0.548510 ATAGGGCCAGTTTGAGGAGC 59.451 55.000 6.18 0.00 0.00 4.70
386 388 1.129811 GAGCGGTTGGGTCGTATTTTG 59.870 52.381 0.00 0.00 32.77 2.44
400 402 3.239941 CGTATTTTGACGACCGATCACTC 59.760 47.826 0.00 0.00 45.82 3.51
403 405 1.244816 TTGACGACCGATCACTCACT 58.755 50.000 0.00 0.00 0.00 3.41
412 414 0.179124 GATCACTCACTGAGCCGTCC 60.179 60.000 5.92 0.00 32.04 4.79
423 425 3.490759 GCCGTCCGTGCAGACATG 61.491 66.667 6.87 0.00 36.52 3.21
424 426 2.261361 CCGTCCGTGCAGACATGA 59.739 61.111 0.00 0.00 36.52 3.07
425 427 1.807165 CCGTCCGTGCAGACATGAG 60.807 63.158 0.00 0.00 36.52 2.90
426 428 1.807165 CGTCCGTGCAGACATGAGG 60.807 63.158 0.00 0.00 36.52 3.86
430 788 0.107508 CCGTGCAGACATGAGGGAAT 60.108 55.000 0.00 0.00 34.49 3.01
440 798 6.154445 CAGACATGAGGGAATTTGAGTTTTG 58.846 40.000 0.00 0.00 0.00 2.44
442 800 6.015940 AGACATGAGGGAATTTGAGTTTTGAC 60.016 38.462 0.00 0.00 0.00 3.18
445 803 6.088016 TGAGGGAATTTGAGTTTTGACATG 57.912 37.500 0.00 0.00 0.00 3.21
497 856 0.951040 GCACGCCTAAGAGCAACAGT 60.951 55.000 0.00 0.00 0.00 3.55
551 910 0.310543 TCATTGAGTGCCAACAACGC 59.689 50.000 0.00 0.00 37.63 4.84
578 937 2.746375 CCTGCCTATCCACCGGCTT 61.746 63.158 0.00 0.00 46.42 4.35
601 960 5.714047 TGATATATCACATCGCTCCTTGTC 58.286 41.667 11.49 0.00 0.00 3.18
626 985 0.824759 GCACCCGGTAAGATCTCAGT 59.175 55.000 0.00 0.00 0.00 3.41
653 1013 0.610232 GTGCCCCATATCCCTCATGC 60.610 60.000 0.00 0.00 0.00 4.06
673 1033 5.550232 TGCTGATCGAAAACTACTACGTA 57.450 39.130 0.00 0.00 0.00 3.57
806 1166 1.134699 TCAATCAGCCCGACAGATGTC 60.135 52.381 2.78 2.78 41.47 3.06
853 1213 5.069781 ACCTCTTCTGCCTATAAGTAGCAAG 59.930 44.000 0.00 0.00 0.00 4.01
870 1230 2.433318 GCCTCTCTGTGTCACCGC 60.433 66.667 0.00 0.00 0.00 5.68
931 1297 3.304525 CGTTAGCTCCAGTACCTTATCGG 60.305 52.174 0.00 0.00 39.35 4.18
933 1299 2.748388 AGCTCCAGTACCTTATCGGTT 58.252 47.619 0.00 0.00 46.37 4.44
934 1300 3.907221 AGCTCCAGTACCTTATCGGTTA 58.093 45.455 0.00 0.00 46.37 2.85
935 1301 4.481072 AGCTCCAGTACCTTATCGGTTAT 58.519 43.478 0.00 0.00 46.37 1.89
936 1302 4.523558 AGCTCCAGTACCTTATCGGTTATC 59.476 45.833 0.00 0.00 46.37 1.75
937 1303 4.615452 GCTCCAGTACCTTATCGGTTATCG 60.615 50.000 0.00 0.00 46.37 2.92
970 1341 1.151908 TTTGGTTACTGCCGGCCTT 59.848 52.632 26.77 13.61 0.00 4.35
988 1359 3.371285 GCCTTATCTCAGTTCGTTTCACC 59.629 47.826 0.00 0.00 0.00 4.02
989 1360 3.612860 CCTTATCTCAGTTCGTTTCACCG 59.387 47.826 0.00 0.00 0.00 4.94
990 1361 4.482386 CTTATCTCAGTTCGTTTCACCGA 58.518 43.478 0.00 0.00 34.52 4.69
991 1362 2.129823 TCTCAGTTCGTTTCACCGAC 57.870 50.000 0.00 0.00 36.42 4.79
992 1363 0.776451 CTCAGTTCGTTTCACCGACG 59.224 55.000 0.00 0.00 41.62 5.12
993 1364 0.381445 TCAGTTCGTTTCACCGACGA 59.619 50.000 0.00 0.00 46.60 4.20
1046 1417 1.233019 GTGGCGTCGCTCTACCTATA 58.767 55.000 18.11 0.00 0.00 1.31
1437 1814 2.362503 TCTGGCATCCTCGACCGT 60.363 61.111 0.00 0.00 0.00 4.83
1460 1837 1.669440 GCCAGGACACCGTGAGTAA 59.331 57.895 5.28 0.00 0.00 2.24
1467 1847 1.463444 GACACCGTGAGTAACATTGCC 59.537 52.381 5.28 0.00 0.00 4.52
1477 1857 5.009631 TGAGTAACATTGCCAGTATTGCTT 58.990 37.500 0.00 0.00 0.00 3.91
1496 1876 3.003378 GCTTCTCTTTACTTGGTTGCGTT 59.997 43.478 0.00 0.00 0.00 4.84
1531 1911 7.606456 TCAACTAATCAACTATTCCCTGTGTTC 59.394 37.037 0.00 0.00 0.00 3.18
1598 1983 0.111089 CGTGTTCGAGCTTCAACTGC 60.111 55.000 0.00 3.39 39.71 4.40
1629 2016 7.839680 ATTCCCTCTGTTTCAATTAACAAGT 57.160 32.000 0.00 0.00 37.55 3.16
1657 2044 5.342259 GCACGCATCCTAAAAGTTTAACTTG 59.658 40.000 11.35 0.00 38.66 3.16
1658 2045 6.435428 CACGCATCCTAAAAGTTTAACTTGT 58.565 36.000 11.35 8.45 38.66 3.16
1659 2046 6.359617 CACGCATCCTAAAAGTTTAACTTGTG 59.640 38.462 11.35 7.74 38.66 3.33
1727 2115 9.793259 AGATTATACCACTGAAAACTTCTTTCA 57.207 29.630 0.43 0.43 36.98 2.69
1794 2183 4.693283 TGGTCGGTCTAATTTATGCTCAG 58.307 43.478 0.00 0.00 0.00 3.35
1801 2190 8.421784 TCGGTCTAATTTATGCTCAGAAGTTAT 58.578 33.333 0.00 0.00 0.00 1.89
1840 2230 7.591426 GCGCAACTTATTAATTGAAATAGAGGG 59.409 37.037 0.30 0.00 0.00 4.30
1886 2276 4.725556 TGTGAAACAGTGAAAGCGATAC 57.274 40.909 0.00 0.00 45.67 2.24
1888 2278 3.496884 GTGAAACAGTGAAAGCGATACCA 59.503 43.478 0.00 0.00 36.32 3.25
1893 2283 2.017049 AGTGAAAGCGATACCAATGGC 58.983 47.619 0.00 0.00 37.11 4.40
1977 2369 8.837099 ATCACTTATAGCTATAGAAGATGGCT 57.163 34.615 18.89 0.98 34.49 4.75
1978 2370 9.928618 ATCACTTATAGCTATAGAAGATGGCTA 57.071 33.333 18.89 5.27 39.35 3.93
1979 2371 9.179909 TCACTTATAGCTATAGAAGATGGCTAC 57.820 37.037 18.89 0.00 38.14 3.58
1980 2372 9.184523 CACTTATAGCTATAGAAGATGGCTACT 57.815 37.037 18.89 0.00 38.14 2.57
1981 2373 9.403583 ACTTATAGCTATAGAAGATGGCTACTC 57.596 37.037 18.89 0.00 38.14 2.59
1982 2374 8.754991 TTATAGCTATAGAAGATGGCTACTCC 57.245 38.462 13.07 0.00 38.14 3.85
1983 2375 4.349365 AGCTATAGAAGATGGCTACTCCC 58.651 47.826 3.21 0.00 0.00 4.30
1984 2376 4.045334 AGCTATAGAAGATGGCTACTCCCT 59.955 45.833 3.21 0.00 0.00 4.20
1985 2377 4.401202 GCTATAGAAGATGGCTACTCCCTC 59.599 50.000 3.21 0.00 0.00 4.30
1986 2378 2.095604 AGAAGATGGCTACTCCCTCC 57.904 55.000 0.00 0.00 30.60 4.30
1987 2379 1.578215 AGAAGATGGCTACTCCCTCCT 59.422 52.381 0.00 0.00 30.60 3.69
1988 2380 2.022527 AGAAGATGGCTACTCCCTCCTT 60.023 50.000 0.00 0.00 30.60 3.36
1989 2381 2.577772 AGATGGCTACTCCCTCCTTT 57.422 50.000 0.00 0.00 30.60 3.11
1990 2382 2.403561 AGATGGCTACTCCCTCCTTTC 58.596 52.381 0.00 0.00 30.60 2.62
1991 2383 1.418264 GATGGCTACTCCCTCCTTTCC 59.582 57.143 0.00 0.00 0.00 3.13
1992 2384 0.976073 TGGCTACTCCCTCCTTTCCG 60.976 60.000 0.00 0.00 0.00 4.30
1993 2385 1.687297 GGCTACTCCCTCCTTTCCGG 61.687 65.000 0.00 0.00 0.00 5.14
1994 2386 0.976590 GCTACTCCCTCCTTTCCGGT 60.977 60.000 0.00 0.00 0.00 5.28
1995 2387 1.569653 CTACTCCCTCCTTTCCGGTT 58.430 55.000 0.00 0.00 0.00 4.44
1996 2388 1.907255 CTACTCCCTCCTTTCCGGTTT 59.093 52.381 0.00 0.00 0.00 3.27
1997 2389 2.034436 ACTCCCTCCTTTCCGGTTTA 57.966 50.000 0.00 0.00 0.00 2.01
1998 2390 2.558974 ACTCCCTCCTTTCCGGTTTAT 58.441 47.619 0.00 0.00 0.00 1.40
1999 2391 3.727948 ACTCCCTCCTTTCCGGTTTATA 58.272 45.455 0.00 0.00 0.00 0.98
2000 2392 3.710165 ACTCCCTCCTTTCCGGTTTATAG 59.290 47.826 0.00 0.00 0.00 1.31
2001 2393 3.043418 TCCCTCCTTTCCGGTTTATAGG 58.957 50.000 0.00 4.62 0.00 2.57
2002 2394 2.486727 CCCTCCTTTCCGGTTTATAGGC 60.487 54.545 0.00 0.00 0.00 3.93
2003 2395 2.438392 CCTCCTTTCCGGTTTATAGGCT 59.562 50.000 0.00 0.00 0.00 4.58
2004 2396 3.118000 CCTCCTTTCCGGTTTATAGGCTT 60.118 47.826 0.00 0.00 0.00 4.35
2005 2397 4.102054 CCTCCTTTCCGGTTTATAGGCTTA 59.898 45.833 0.00 0.00 0.00 3.09
2006 2398 5.221864 CCTCCTTTCCGGTTTATAGGCTTAT 60.222 44.000 0.00 0.00 0.00 1.73
2007 2399 5.861727 TCCTTTCCGGTTTATAGGCTTATC 58.138 41.667 0.00 0.00 0.00 1.75
2008 2400 5.605488 TCCTTTCCGGTTTATAGGCTTATCT 59.395 40.000 0.00 0.00 0.00 1.98
2009 2401 6.100714 TCCTTTCCGGTTTATAGGCTTATCTT 59.899 38.462 0.00 0.00 0.00 2.40
2010 2402 7.290714 TCCTTTCCGGTTTATAGGCTTATCTTA 59.709 37.037 0.00 0.00 0.00 2.10
2011 2403 7.935210 CCTTTCCGGTTTATAGGCTTATCTTAA 59.065 37.037 0.00 0.00 0.00 1.85
2012 2404 9.333724 CTTTCCGGTTTATAGGCTTATCTTAAA 57.666 33.333 0.00 0.00 0.00 1.52
2013 2405 9.683870 TTTCCGGTTTATAGGCTTATCTTAAAA 57.316 29.630 0.00 0.00 0.00 1.52
2014 2406 9.856162 TTCCGGTTTATAGGCTTATCTTAAAAT 57.144 29.630 0.00 0.00 0.00 1.82
2015 2407 9.856162 TCCGGTTTATAGGCTTATCTTAAAATT 57.144 29.630 0.00 0.00 0.00 1.82
2049 2441 9.434420 TTCATTTTATAAGGCTCAATTTGGTTG 57.566 29.630 0.00 0.00 39.25 3.77
2050 2442 8.592809 TCATTTTATAAGGCTCAATTTGGTTGT 58.407 29.630 0.00 0.00 38.95 3.32
2051 2443 9.218440 CATTTTATAAGGCTCAATTTGGTTGTT 57.782 29.630 0.00 0.00 38.95 2.83
2052 2444 8.825667 TTTTATAAGGCTCAATTTGGTTGTTC 57.174 30.769 0.00 0.00 38.95 3.18
2053 2445 3.751479 AAGGCTCAATTTGGTTGTTCC 57.249 42.857 0.00 0.00 38.95 3.62
2054 2446 1.970640 AGGCTCAATTTGGTTGTTCCC 59.029 47.619 0.00 0.00 38.95 3.97
2055 2447 1.970640 GGCTCAATTTGGTTGTTCCCT 59.029 47.619 0.00 0.00 38.95 4.20
2056 2448 3.161866 GGCTCAATTTGGTTGTTCCCTA 58.838 45.455 0.00 0.00 38.95 3.53
2057 2449 3.769300 GGCTCAATTTGGTTGTTCCCTAT 59.231 43.478 0.00 0.00 38.95 2.57
2058 2450 4.142160 GGCTCAATTTGGTTGTTCCCTATC 60.142 45.833 0.00 0.00 38.95 2.08
2059 2451 4.462483 GCTCAATTTGGTTGTTCCCTATCA 59.538 41.667 0.00 0.00 38.95 2.15
2060 2452 5.622233 GCTCAATTTGGTTGTTCCCTATCAC 60.622 44.000 0.00 0.00 38.95 3.06
2061 2453 5.389520 TCAATTTGGTTGTTCCCTATCACA 58.610 37.500 0.00 0.00 38.95 3.58
2062 2454 6.015918 TCAATTTGGTTGTTCCCTATCACAT 58.984 36.000 0.00 0.00 38.95 3.21
2063 2455 5.920193 ATTTGGTTGTTCCCTATCACATG 57.080 39.130 0.00 0.00 34.77 3.21
2064 2456 4.380843 TTGGTTGTTCCCTATCACATGT 57.619 40.909 0.00 0.00 34.77 3.21
2065 2457 4.380843 TGGTTGTTCCCTATCACATGTT 57.619 40.909 0.00 0.00 34.77 2.71
2066 2458 4.331968 TGGTTGTTCCCTATCACATGTTC 58.668 43.478 0.00 0.00 34.77 3.18
2067 2459 4.202514 TGGTTGTTCCCTATCACATGTTCA 60.203 41.667 0.00 0.00 34.77 3.18
2068 2460 4.396166 GGTTGTTCCCTATCACATGTTCAG 59.604 45.833 0.00 0.00 0.00 3.02
2069 2461 5.245531 GTTGTTCCCTATCACATGTTCAGA 58.754 41.667 0.00 0.00 0.00 3.27
2070 2462 5.698741 TGTTCCCTATCACATGTTCAGAT 57.301 39.130 0.00 0.00 0.00 2.90
2071 2463 6.065976 TGTTCCCTATCACATGTTCAGATT 57.934 37.500 0.00 0.00 0.00 2.40
2072 2464 6.115446 TGTTCCCTATCACATGTTCAGATTC 58.885 40.000 0.00 0.00 0.00 2.52
2073 2465 5.296151 TCCCTATCACATGTTCAGATTCC 57.704 43.478 0.00 0.00 0.00 3.01
2074 2466 4.721274 TCCCTATCACATGTTCAGATTCCA 59.279 41.667 0.00 0.00 0.00 3.53
2075 2467 5.191522 TCCCTATCACATGTTCAGATTCCAA 59.808 40.000 0.00 0.00 0.00 3.53
2076 2468 5.530171 CCCTATCACATGTTCAGATTCCAAG 59.470 44.000 0.00 0.00 0.00 3.61
2077 2469 5.530171 CCTATCACATGTTCAGATTCCAAGG 59.470 44.000 0.00 0.00 0.00 3.61
2078 2470 4.371624 TCACATGTTCAGATTCCAAGGT 57.628 40.909 0.00 0.00 0.00 3.50
2079 2471 5.497464 TCACATGTTCAGATTCCAAGGTA 57.503 39.130 0.00 0.00 0.00 3.08
2080 2472 5.245531 TCACATGTTCAGATTCCAAGGTAC 58.754 41.667 0.00 0.00 0.00 3.34
2081 2473 5.003160 CACATGTTCAGATTCCAAGGTACA 58.997 41.667 0.00 0.00 0.00 2.90
2082 2474 5.649395 CACATGTTCAGATTCCAAGGTACAT 59.351 40.000 0.00 0.00 0.00 2.29
2083 2475 6.151648 CACATGTTCAGATTCCAAGGTACATT 59.848 38.462 0.00 0.00 0.00 2.71
2084 2476 7.336679 CACATGTTCAGATTCCAAGGTACATTA 59.663 37.037 0.00 0.00 0.00 1.90
2085 2477 7.888021 ACATGTTCAGATTCCAAGGTACATTAA 59.112 33.333 0.00 0.00 0.00 1.40
2086 2478 8.739039 CATGTTCAGATTCCAAGGTACATTAAA 58.261 33.333 0.00 0.00 0.00 1.52
2087 2479 8.877864 TGTTCAGATTCCAAGGTACATTAAAT 57.122 30.769 0.00 0.00 0.00 1.40
2088 2480 8.956426 TGTTCAGATTCCAAGGTACATTAAATC 58.044 33.333 14.81 14.81 0.00 2.17
2089 2481 8.956426 GTTCAGATTCCAAGGTACATTAAATCA 58.044 33.333 20.51 6.79 0.00 2.57
2090 2482 9.699410 TTCAGATTCCAAGGTACATTAAATCAT 57.301 29.630 20.51 9.76 0.00 2.45
2091 2483 9.699410 TCAGATTCCAAGGTACATTAAATCATT 57.301 29.630 20.51 6.79 0.00 2.57
2092 2484 9.740239 CAGATTCCAAGGTACATTAAATCATTG 57.260 33.333 20.51 12.33 0.00 2.82
2093 2485 8.416329 AGATTCCAAGGTACATTAAATCATTGC 58.584 33.333 20.51 4.10 0.00 3.56
2094 2486 7.473735 TTCCAAGGTACATTAAATCATTGCA 57.526 32.000 0.00 0.00 0.00 4.08
2095 2487 7.658525 TCCAAGGTACATTAAATCATTGCAT 57.341 32.000 0.00 0.00 0.00 3.96
2096 2488 7.490840 TCCAAGGTACATTAAATCATTGCATG 58.509 34.615 0.00 0.00 0.00 4.06
2097 2489 6.201425 CCAAGGTACATTAAATCATTGCATGC 59.799 38.462 11.82 11.82 0.00 4.06
2098 2490 6.468333 AGGTACATTAAATCATTGCATGCA 57.532 33.333 18.46 18.46 0.00 3.96
2099 2491 6.876155 AGGTACATTAAATCATTGCATGCAA 58.124 32.000 33.57 33.57 40.47 4.08
2100 2492 6.982141 AGGTACATTAAATCATTGCATGCAAG 59.018 34.615 34.15 25.40 39.47 4.01
2101 2493 6.757947 GGTACATTAAATCATTGCATGCAAGT 59.242 34.615 34.15 24.72 39.47 3.16
2102 2494 7.920151 GGTACATTAAATCATTGCATGCAAGTA 59.080 33.333 34.15 25.25 39.47 2.24
2103 2495 9.467258 GTACATTAAATCATTGCATGCAAGTAT 57.533 29.630 34.15 26.18 39.47 2.12
2104 2496 8.951787 ACATTAAATCATTGCATGCAAGTATT 57.048 26.923 34.15 29.40 39.47 1.89
2109 2501 8.867112 AAATCATTGCATGCAAGTATTAAGAG 57.133 30.769 34.15 16.39 39.47 2.85
2110 2502 7.812690 ATCATTGCATGCAAGTATTAAGAGA 57.187 32.000 34.15 20.12 39.47 3.10
2111 2503 7.628769 TCATTGCATGCAAGTATTAAGAGAA 57.371 32.000 34.15 10.64 39.47 2.87
2112 2504 8.054152 TCATTGCATGCAAGTATTAAGAGAAA 57.946 30.769 34.15 10.19 39.47 2.52
2113 2505 8.522003 TCATTGCATGCAAGTATTAAGAGAAAA 58.478 29.630 34.15 9.52 39.47 2.29
2114 2506 9.309516 CATTGCATGCAAGTATTAAGAGAAAAT 57.690 29.630 34.15 12.14 39.47 1.82
2115 2507 9.880157 ATTGCATGCAAGTATTAAGAGAAAATT 57.120 25.926 34.15 11.77 39.47 1.82
2116 2508 8.692110 TGCATGCAAGTATTAAGAGAAAATTG 57.308 30.769 20.30 0.00 0.00 2.32
2117 2509 8.522003 TGCATGCAAGTATTAAGAGAAAATTGA 58.478 29.630 20.30 0.00 0.00 2.57
2118 2510 9.525409 GCATGCAAGTATTAAGAGAAAATTGAT 57.475 29.630 14.21 0.00 0.00 2.57
2165 2557 7.485418 CATGCATTGCAATTAATACATTGGT 57.515 32.000 16.46 0.00 43.62 3.67
2166 2558 8.590719 CATGCATTGCAATTAATACATTGGTA 57.409 30.769 16.46 0.00 43.62 3.25
2167 2559 9.043079 CATGCATTGCAATTAATACATTGGTAA 57.957 29.630 16.46 0.00 43.62 2.85
2168 2560 9.610705 ATGCATTGCAATTAATACATTGGTAAA 57.389 25.926 16.46 0.00 43.62 2.01
2169 2561 8.877779 TGCATTGCAATTAATACATTGGTAAAC 58.122 29.630 9.83 0.00 34.76 2.01
2170 2562 8.877779 GCATTGCAATTAATACATTGGTAAACA 58.122 29.630 9.83 0.00 35.07 2.83
2201 2593 9.612066 TTTTTGAGGAAAACAAGAGCATTAATT 57.388 25.926 0.00 0.00 32.44 1.40
2202 2594 8.592105 TTTGAGGAAAACAAGAGCATTAATTG 57.408 30.769 0.00 0.00 0.00 2.32
2203 2595 6.690530 TGAGGAAAACAAGAGCATTAATTGG 58.309 36.000 0.00 0.00 0.00 3.16
2204 2596 6.041423 AGGAAAACAAGAGCATTAATTGGG 57.959 37.500 0.00 0.00 0.00 4.12
2205 2597 5.543790 AGGAAAACAAGAGCATTAATTGGGT 59.456 36.000 0.00 0.00 0.00 4.51
2206 2598 5.639082 GGAAAACAAGAGCATTAATTGGGTG 59.361 40.000 0.00 0.00 0.00 4.61
2207 2599 5.806654 AAACAAGAGCATTAATTGGGTGT 57.193 34.783 0.00 0.00 0.00 4.16
2208 2600 5.806654 AACAAGAGCATTAATTGGGTGTT 57.193 34.783 0.00 0.00 0.00 3.32
2209 2601 5.806654 ACAAGAGCATTAATTGGGTGTTT 57.193 34.783 0.00 0.00 0.00 2.83
2210 2602 6.173427 ACAAGAGCATTAATTGGGTGTTTT 57.827 33.333 0.00 0.00 0.00 2.43
2211 2603 6.591001 ACAAGAGCATTAATTGGGTGTTTTT 58.409 32.000 0.00 0.00 0.00 1.94
2212 2604 7.731054 ACAAGAGCATTAATTGGGTGTTTTTA 58.269 30.769 0.00 0.00 0.00 1.52
2213 2605 7.655732 ACAAGAGCATTAATTGGGTGTTTTTAC 59.344 33.333 0.00 0.00 0.00 2.01
2214 2606 7.296628 AGAGCATTAATTGGGTGTTTTTACA 57.703 32.000 0.00 0.00 0.00 2.41
2215 2607 7.731054 AGAGCATTAATTGGGTGTTTTTACAA 58.269 30.769 0.00 0.00 0.00 2.41
2216 2608 8.207545 AGAGCATTAATTGGGTGTTTTTACAAA 58.792 29.630 0.00 0.00 0.00 2.83
2217 2609 8.148807 AGCATTAATTGGGTGTTTTTACAAAC 57.851 30.769 0.00 0.00 42.49 2.93
2218 2610 7.990314 AGCATTAATTGGGTGTTTTTACAAACT 59.010 29.630 6.10 0.00 42.61 2.66
2219 2611 9.262358 GCATTAATTGGGTGTTTTTACAAACTA 57.738 29.630 6.10 0.00 42.61 2.24
2224 2616 9.503399 AATTGGGTGTTTTTACAAACTACAAAA 57.497 25.926 6.10 2.78 42.61 2.44
2225 2617 8.897872 TTGGGTGTTTTTACAAACTACAAAAA 57.102 26.923 6.10 0.00 42.61 1.94
2226 2618 8.535690 TGGGTGTTTTTACAAACTACAAAAAG 57.464 30.769 6.10 0.00 42.61 2.27
2227 2619 8.148999 TGGGTGTTTTTACAAACTACAAAAAGT 58.851 29.630 6.10 0.00 42.61 2.66
2228 2620 9.636879 GGGTGTTTTTACAAACTACAAAAAGTA 57.363 29.630 6.10 0.00 42.61 2.24
2236 2628 7.648039 ACAAACTACAAAAAGTATTCCACCA 57.352 32.000 0.00 0.00 30.93 4.17
2237 2629 7.485810 ACAAACTACAAAAAGTATTCCACCAC 58.514 34.615 0.00 0.00 30.93 4.16
2238 2630 7.340999 ACAAACTACAAAAAGTATTCCACCACT 59.659 33.333 0.00 0.00 30.93 4.00
2239 2631 7.506328 AACTACAAAAAGTATTCCACCACTC 57.494 36.000 0.00 0.00 30.93 3.51
2240 2632 6.597562 ACTACAAAAAGTATTCCACCACTCA 58.402 36.000 0.00 0.00 30.93 3.41
2241 2633 5.767816 ACAAAAAGTATTCCACCACTCAC 57.232 39.130 0.00 0.00 0.00 3.51
2242 2634 4.583073 ACAAAAAGTATTCCACCACTCACC 59.417 41.667 0.00 0.00 0.00 4.02
2243 2635 4.447138 AAAAGTATTCCACCACTCACCA 57.553 40.909 0.00 0.00 0.00 4.17
2244 2636 4.657814 AAAGTATTCCACCACTCACCAT 57.342 40.909 0.00 0.00 0.00 3.55
2245 2637 3.914426 AGTATTCCACCACTCACCATC 57.086 47.619 0.00 0.00 0.00 3.51
2246 2638 3.454858 AGTATTCCACCACTCACCATCT 58.545 45.455 0.00 0.00 0.00 2.90
2247 2639 4.620723 AGTATTCCACCACTCACCATCTA 58.379 43.478 0.00 0.00 0.00 1.98
2248 2640 3.914426 ATTCCACCACTCACCATCTAC 57.086 47.619 0.00 0.00 0.00 2.59
2249 2641 1.568504 TCCACCACTCACCATCTACC 58.431 55.000 0.00 0.00 0.00 3.18
2250 2642 1.078823 TCCACCACTCACCATCTACCT 59.921 52.381 0.00 0.00 0.00 3.08
2251 2643 1.909302 CCACCACTCACCATCTACCTT 59.091 52.381 0.00 0.00 0.00 3.50
2252 2644 2.355108 CCACCACTCACCATCTACCTTG 60.355 54.545 0.00 0.00 0.00 3.61
2253 2645 2.303022 CACCACTCACCATCTACCTTGT 59.697 50.000 0.00 0.00 0.00 3.16
2254 2646 2.979678 ACCACTCACCATCTACCTTGTT 59.020 45.455 0.00 0.00 0.00 2.83
2255 2647 3.394606 ACCACTCACCATCTACCTTGTTT 59.605 43.478 0.00 0.00 0.00 2.83
2256 2648 3.753272 CCACTCACCATCTACCTTGTTTG 59.247 47.826 0.00 0.00 0.00 2.93
2257 2649 3.753272 CACTCACCATCTACCTTGTTTGG 59.247 47.826 0.00 0.00 0.00 3.28
2258 2650 3.394606 ACTCACCATCTACCTTGTTTGGT 59.605 43.478 0.00 0.00 41.27 3.67
2261 2653 4.021102 ACCATCTACCTTGTTTGGTGAG 57.979 45.455 0.00 0.00 39.18 3.51
2262 2654 3.650942 ACCATCTACCTTGTTTGGTGAGA 59.349 43.478 0.00 0.00 39.18 3.27
2263 2655 4.289672 ACCATCTACCTTGTTTGGTGAGAT 59.710 41.667 0.00 0.00 39.18 2.75
2264 2656 5.222130 ACCATCTACCTTGTTTGGTGAGATT 60.222 40.000 0.00 0.00 39.18 2.40
2265 2657 5.711976 CCATCTACCTTGTTTGGTGAGATTT 59.288 40.000 0.00 0.00 41.05 2.17
2266 2658 6.209391 CCATCTACCTTGTTTGGTGAGATTTT 59.791 38.462 0.00 0.00 41.05 1.82
2267 2659 7.255942 CCATCTACCTTGTTTGGTGAGATTTTT 60.256 37.037 0.00 0.00 41.05 1.94
2268 2660 7.038154 TCTACCTTGTTTGGTGAGATTTTTG 57.962 36.000 0.00 0.00 41.05 2.44
2269 2661 5.930837 ACCTTGTTTGGTGAGATTTTTGA 57.069 34.783 0.00 0.00 39.17 2.69
2270 2662 6.293004 ACCTTGTTTGGTGAGATTTTTGAA 57.707 33.333 0.00 0.00 39.17 2.69
2271 2663 6.888105 ACCTTGTTTGGTGAGATTTTTGAAT 58.112 32.000 0.00 0.00 39.17 2.57
2272 2664 7.337938 ACCTTGTTTGGTGAGATTTTTGAATT 58.662 30.769 0.00 0.00 39.17 2.17
2273 2665 7.280652 ACCTTGTTTGGTGAGATTTTTGAATTG 59.719 33.333 0.00 0.00 39.17 2.32
2274 2666 7.495279 CCTTGTTTGGTGAGATTTTTGAATTGA 59.505 33.333 0.00 0.00 0.00 2.57
2275 2667 8.422973 TTGTTTGGTGAGATTTTTGAATTGAG 57.577 30.769 0.00 0.00 0.00 3.02
2276 2668 6.479660 TGTTTGGTGAGATTTTTGAATTGAGC 59.520 34.615 0.00 0.00 0.00 4.26
2277 2669 5.138125 TGGTGAGATTTTTGAATTGAGCC 57.862 39.130 0.00 0.00 0.00 4.70
2278 2670 4.021192 TGGTGAGATTTTTGAATTGAGCCC 60.021 41.667 0.00 0.00 0.00 5.19
2279 2671 4.221482 GGTGAGATTTTTGAATTGAGCCCT 59.779 41.667 0.00 0.00 0.00 5.19
2280 2672 5.418840 GGTGAGATTTTTGAATTGAGCCCTA 59.581 40.000 0.00 0.00 0.00 3.53
2281 2673 6.097412 GGTGAGATTTTTGAATTGAGCCCTAT 59.903 38.462 0.00 0.00 0.00 2.57
2282 2674 7.285401 GGTGAGATTTTTGAATTGAGCCCTATA 59.715 37.037 0.00 0.00 0.00 1.31
2283 2675 8.686334 GTGAGATTTTTGAATTGAGCCCTATAA 58.314 33.333 0.00 0.00 0.00 0.98
2284 2676 9.253832 TGAGATTTTTGAATTGAGCCCTATAAA 57.746 29.630 0.00 0.00 0.00 1.40
2285 2677 9.521503 GAGATTTTTGAATTGAGCCCTATAAAC 57.478 33.333 0.00 0.00 0.00 2.01
2286 2678 8.478066 AGATTTTTGAATTGAGCCCTATAAACC 58.522 33.333 0.00 0.00 0.00 3.27
2287 2679 5.828299 TTTGAATTGAGCCCTATAAACCG 57.172 39.130 0.00 0.00 0.00 4.44
2288 2680 3.815809 TGAATTGAGCCCTATAAACCGG 58.184 45.455 0.00 0.00 0.00 5.28
2289 2681 3.456644 TGAATTGAGCCCTATAAACCGGA 59.543 43.478 9.46 0.00 0.00 5.14
2290 2682 4.080243 TGAATTGAGCCCTATAAACCGGAA 60.080 41.667 9.46 0.00 0.00 4.30
2291 2683 4.513406 ATTGAGCCCTATAAACCGGAAA 57.487 40.909 9.46 0.00 0.00 3.13
2292 2684 3.553828 TGAGCCCTATAAACCGGAAAG 57.446 47.619 9.46 0.00 0.00 2.62
2294 2686 2.436911 GAGCCCTATAAACCGGAAAGGA 59.563 50.000 9.46 0.00 45.00 3.36
2295 2687 2.438392 AGCCCTATAAACCGGAAAGGAG 59.562 50.000 9.46 0.00 45.00 3.69
2296 2688 2.486727 GCCCTATAAACCGGAAAGGAGG 60.487 54.545 9.46 9.03 45.00 4.30
2297 2689 2.105993 CCCTATAAACCGGAAAGGAGGG 59.894 54.545 9.46 14.71 45.00 4.30
2298 2690 3.043418 CCTATAAACCGGAAAGGAGGGA 58.957 50.000 9.46 0.00 45.00 4.20
2299 2691 3.071167 CCTATAAACCGGAAAGGAGGGAG 59.929 52.174 9.46 0.00 45.00 4.30
2300 2692 2.034436 TAAACCGGAAAGGAGGGAGT 57.966 50.000 9.46 0.00 45.00 3.85
2301 2693 2.034436 AAACCGGAAAGGAGGGAGTA 57.966 50.000 9.46 0.00 45.00 2.59
2306 2698 2.108168 CGGAAAGGAGGGAGTATGTGA 58.892 52.381 0.00 0.00 0.00 3.58
2307 2699 2.700897 CGGAAAGGAGGGAGTATGTGAT 59.299 50.000 0.00 0.00 0.00 3.06
2316 2708 5.282055 AGGGAGTATGTGATATGTGTGTG 57.718 43.478 0.00 0.00 0.00 3.82
2418 2810 4.817063 CGGCAGCCAACATTCGCG 62.817 66.667 13.30 0.00 0.00 5.87
2419 2811 4.481112 GGCAGCCAACATTCGCGG 62.481 66.667 6.55 0.00 0.00 6.46
2515 2907 4.015084 GACTACCTGCTCAACTACTACCA 58.985 47.826 0.00 0.00 0.00 3.25
2571 2963 1.080501 ACACGCTCACTCATCACCG 60.081 57.895 0.00 0.00 0.00 4.94
2638 3030 4.677584 CACTCCTGTGCTCTGATTACTAC 58.322 47.826 0.00 0.00 37.38 2.73
2639 3031 3.378742 ACTCCTGTGCTCTGATTACTACG 59.621 47.826 0.00 0.00 0.00 3.51
2743 3140 6.623486 TGCAGTATGAAAATCAAGTGAATGG 58.377 36.000 0.00 0.00 39.69 3.16
2761 3158 3.565764 TGGATTGAATGAGTAGGCTGG 57.434 47.619 0.00 0.00 0.00 4.85
2762 3159 2.173356 TGGATTGAATGAGTAGGCTGGG 59.827 50.000 0.00 0.00 0.00 4.45
2763 3160 2.225467 GATTGAATGAGTAGGCTGGGC 58.775 52.381 0.00 0.00 0.00 5.36
2764 3161 0.991146 TTGAATGAGTAGGCTGGGCA 59.009 50.000 0.00 0.00 0.00 5.36
2765 3162 0.543277 TGAATGAGTAGGCTGGGCAG 59.457 55.000 0.00 0.00 0.00 4.85
2785 3185 3.509659 GCCTAACGTGGGCCATTC 58.490 61.111 10.70 0.00 43.49 2.67
2811 3211 6.854381 GGTTTTATTTTTCTCGTGGTACAGTG 59.146 38.462 0.00 0.00 41.80 3.66
2839 3241 4.966965 TTTTGCCGTTTTTAGTGAGACA 57.033 36.364 0.00 0.00 0.00 3.41
2849 3251 8.286800 CCGTTTTTAGTGAGACATTTGATTACA 58.713 33.333 0.00 0.00 0.00 2.41
3020 3422 1.807573 CCTCTTCAACGGCGAGCTC 60.808 63.158 16.62 2.73 0.00 4.09
3256 3665 3.124051 TTGCTGCAGTGAGCTGGGT 62.124 57.895 16.64 0.00 45.94 4.51
3413 3822 0.035820 GGAAGCGTACCCCATCAACA 60.036 55.000 0.00 0.00 0.00 3.33
3462 3879 5.105310 AGCGGTTGAGTATAAACAGAGACAT 60.105 40.000 0.00 0.00 0.00 3.06
3647 4072 5.461078 GGCGATTAAGAGCAACTCGTTAATA 59.539 40.000 7.17 0.00 35.36 0.98
3747 4175 3.144506 CAAGCTCGCATCCTCCATATTT 58.855 45.455 0.00 0.00 0.00 1.40
3764 4192 1.742308 TTTAGAGGTTGTGGAGGGCT 58.258 50.000 0.00 0.00 0.00 5.19
3778 4206 1.623811 GAGGGCTAGTGTGGAGTTCAA 59.376 52.381 0.00 0.00 0.00 2.69
3781 4209 2.633488 GGCTAGTGTGGAGTTCAATCC 58.367 52.381 0.00 0.00 40.03 3.01
3793 4221 1.618343 GTTCAATCCCAACCCAACAGG 59.382 52.381 0.00 0.00 43.78 4.00
3804 4232 4.093952 CAACAGGCAGCGCGGAAG 62.094 66.667 13.03 2.00 0.00 3.46
3874 4303 2.578586 AATGCCATGGCCACTCCCTC 62.579 60.000 33.44 3.62 41.09 4.30
3875 4304 4.512914 GCCATGGCCACTCCCTCC 62.513 72.222 27.24 0.00 34.56 4.30
3883 4312 1.689233 CCACTCCCTCCGATTCCCA 60.689 63.158 0.00 0.00 0.00 4.37
3885 4314 0.107456 CACTCCCTCCGATTCCCATG 59.893 60.000 0.00 0.00 0.00 3.66
3886 4315 1.056700 ACTCCCTCCGATTCCCATGG 61.057 60.000 4.14 4.14 0.00 3.66
3887 4316 2.113986 CCCTCCGATTCCCATGGC 59.886 66.667 6.09 0.00 0.00 4.40
3888 4317 2.113986 CCTCCGATTCCCATGGCC 59.886 66.667 6.09 0.00 0.00 5.36
3889 4318 2.756042 CCTCCGATTCCCATGGCCA 61.756 63.158 8.56 8.56 0.00 5.36
3890 4319 1.526917 CTCCGATTCCCATGGCCAC 60.527 63.158 8.16 0.00 0.00 5.01
3891 4320 1.987807 CTCCGATTCCCATGGCCACT 61.988 60.000 8.16 0.00 0.00 4.00
3892 4321 1.526917 CCGATTCCCATGGCCACTC 60.527 63.158 8.16 0.00 0.00 3.51
3893 4322 1.526917 CGATTCCCATGGCCACTCC 60.527 63.158 8.16 0.00 0.00 3.85
3894 4323 1.152673 GATTCCCATGGCCACTCCC 60.153 63.158 8.16 0.00 0.00 4.30
3895 4324 1.623686 ATTCCCATGGCCACTCCCT 60.624 57.895 8.16 0.00 0.00 4.20
3896 4325 1.649271 ATTCCCATGGCCACTCCCTC 61.649 60.000 8.16 0.00 0.00 4.30
3897 4326 3.813724 CCCATGGCCACTCCCTCC 61.814 72.222 8.16 0.00 0.00 4.30
3898 4327 4.181010 CCATGGCCACTCCCTCCG 62.181 72.222 8.16 0.00 0.00 4.63
3899 4328 3.083349 CATGGCCACTCCCTCCGA 61.083 66.667 8.16 0.00 0.00 4.55
3900 4329 2.040464 ATGGCCACTCCCTCCGAT 60.040 61.111 8.16 0.00 0.00 4.18
3905 4334 1.689233 CCACTCCCTCCGATTCCCA 60.689 63.158 0.00 0.00 0.00 4.37
3908 4337 1.056700 ACTCCCTCCGATTCCCATGG 61.057 60.000 4.14 4.14 0.00 3.66
3914 4343 2.908940 CGATTCCCATGGCCAGCC 60.909 66.667 13.05 0.38 0.00 4.85
3924 4353 4.864334 GGCCAGCCCGTCAGATGG 62.864 72.222 0.00 0.93 35.84 3.51
3935 4364 1.858091 GTCAGATGGACGCCACATAG 58.142 55.000 0.50 0.00 35.80 2.23
3937 4366 0.179076 CAGATGGACGCCACATAGCA 60.179 55.000 0.50 0.00 35.80 3.49
3939 4368 1.141657 AGATGGACGCCACATAGCATT 59.858 47.619 0.50 0.00 35.80 3.56
3951 4380 6.234177 GCCACATAGCATTATCTCCTAGTTT 58.766 40.000 0.00 0.00 0.00 2.66
3965 4394 5.071788 TCTCCTAGTTTGAATGTGAAGGTGT 59.928 40.000 0.00 0.00 0.00 4.16
3967 4396 5.530915 TCCTAGTTTGAATGTGAAGGTGTTG 59.469 40.000 0.00 0.00 0.00 3.33
3978 4407 0.818040 AAGGTGTTGGGAGTTGTCGC 60.818 55.000 0.00 0.00 36.17 5.19
3980 4409 1.885850 GTGTTGGGAGTTGTCGCGT 60.886 57.895 5.77 0.00 38.49 6.01
4024 4453 2.501223 AAGCCGCGTTTCTCATCGGA 62.501 55.000 4.92 0.00 44.23 4.55
4026 4455 1.999051 CCGCGTTTCTCATCGGAAG 59.001 57.895 4.92 0.00 44.23 3.46
4027 4456 0.736325 CCGCGTTTCTCATCGGAAGT 60.736 55.000 4.92 0.00 44.23 3.01
4028 4457 0.366871 CGCGTTTCTCATCGGAAGTG 59.633 55.000 0.00 0.00 0.00 3.16
4029 4458 0.095417 GCGTTTCTCATCGGAAGTGC 59.905 55.000 0.00 0.00 0.00 4.40
4030 4459 1.428448 CGTTTCTCATCGGAAGTGCA 58.572 50.000 0.00 0.00 0.00 4.57
4031 4460 2.002586 CGTTTCTCATCGGAAGTGCAT 58.997 47.619 0.00 0.00 0.00 3.96
4032 4461 2.029728 CGTTTCTCATCGGAAGTGCATC 59.970 50.000 0.00 0.00 0.00 3.91
4033 4462 1.926561 TTCTCATCGGAAGTGCATCG 58.073 50.000 0.00 0.00 0.00 3.84
4075 4505 3.455328 GGCCTCCTAAAAGGTCGTC 57.545 57.895 0.00 0.00 38.79 4.20
4100 4530 3.933886 TCCTTCCCTCTCTCATATTGCT 58.066 45.455 0.00 0.00 0.00 3.91
4127 4557 1.272704 GGTGCCTTCCAAATCTTCCCT 60.273 52.381 0.00 0.00 0.00 4.20
4128 4558 2.095461 GTGCCTTCCAAATCTTCCCTC 58.905 52.381 0.00 0.00 0.00 4.30
4131 4561 1.063642 CCTTCCAAATCTTCCCTCCCC 60.064 57.143 0.00 0.00 0.00 4.81
4132 4562 1.007607 TTCCAAATCTTCCCTCCCCC 58.992 55.000 0.00 0.00 0.00 5.40
4167 4675 4.947388 CCAAAGGGAACTATTGATTTCCGA 59.053 41.667 0.00 0.00 42.10 4.55
4170 4678 3.521937 AGGGAACTATTGATTTCCGACCA 59.478 43.478 0.00 0.00 42.10 4.02
4177 4685 2.163818 TGATTTCCGACCACACACTC 57.836 50.000 0.00 0.00 0.00 3.51
4220 4728 2.949678 CGACTTGGGACGATCGCG 60.950 66.667 16.60 0.00 44.79 5.87
4238 4746 1.452108 GTTGAGGCCATCTTCCGGG 60.452 63.158 5.01 0.00 0.00 5.73
4243 4751 2.595754 GCCATCTTCCGGGGCATC 60.596 66.667 13.19 0.00 46.92 3.91
4244 4752 2.918248 CCATCTTCCGGGGCATCA 59.082 61.111 0.00 0.00 0.00 3.07
4262 4770 1.414550 TCAAGACCCACAATGTCGTCA 59.585 47.619 11.34 0.00 37.80 4.35
4290 4798 3.045142 CATGGAATCATGGCCGGC 58.955 61.111 21.18 21.18 45.19 6.13
4293 4801 1.183030 ATGGAATCATGGCCGGCATG 61.183 55.000 30.85 26.87 31.34 4.06
4297 4805 3.797507 ATCATGGCCGGCATGGGAC 62.798 63.158 30.85 10.31 38.63 4.46
4318 4826 0.737715 AGCGCGACAAGTCCATCTTC 60.738 55.000 12.10 0.00 33.63 2.87
4327 4835 1.227973 GTCCATCTTCGGGGGCATC 60.228 63.158 0.00 0.00 0.00 3.91
4359 4867 1.163309 TCCCATCCCCACTTGACCT 59.837 57.895 0.00 0.00 0.00 3.85
4367 4875 1.715019 CCCACTTGACCTTGACCCCA 61.715 60.000 0.00 0.00 0.00 4.96
4368 4876 0.537371 CCACTTGACCTTGACCCCAC 60.537 60.000 0.00 0.00 0.00 4.61
4372 4880 3.658422 GACCTTGACCCCACCCCC 61.658 72.222 0.00 0.00 0.00 5.40
4432 4940 2.044946 GCCATGGAGGTGGTGGTC 60.045 66.667 18.40 0.00 41.47 4.02
4433 4941 2.268920 CCATGGAGGTGGTGGTCG 59.731 66.667 5.56 0.00 34.46 4.79
4434 4942 2.436646 CATGGAGGTGGTGGTCGC 60.437 66.667 0.00 0.00 0.00 5.19
4435 4943 2.927856 ATGGAGGTGGTGGTCGCA 60.928 61.111 0.00 0.00 0.00 5.10
4436 4944 3.254024 ATGGAGGTGGTGGTCGCAC 62.254 63.158 0.00 0.00 0.00 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.757917 GTCGCTGCTCCCTCTCCT 60.758 66.667 0.00 0.00 0.00 3.69
1 2 2.172483 TTTGTCGCTGCTCCCTCTCC 62.172 60.000 0.00 0.00 0.00 3.71
2 3 1.016653 GTTTGTCGCTGCTCCCTCTC 61.017 60.000 0.00 0.00 0.00 3.20
3 4 1.004440 GTTTGTCGCTGCTCCCTCT 60.004 57.895 0.00 0.00 0.00 3.69
4 5 2.383527 CGTTTGTCGCTGCTCCCTC 61.384 63.158 0.00 0.00 0.00 4.30
5 6 2.357517 CGTTTGTCGCTGCTCCCT 60.358 61.111 0.00 0.00 0.00 4.20
6 7 2.357034 TCGTTTGTCGCTGCTCCC 60.357 61.111 0.00 0.00 39.67 4.30
7 8 1.347817 CTCTCGTTTGTCGCTGCTCC 61.348 60.000 0.00 0.00 39.67 4.70
8 9 1.347817 CCTCTCGTTTGTCGCTGCTC 61.348 60.000 0.00 0.00 39.67 4.26
9 10 1.373497 CCTCTCGTTTGTCGCTGCT 60.373 57.895 0.00 0.00 39.67 4.24
10 11 1.347817 CTCCTCTCGTTTGTCGCTGC 61.348 60.000 0.00 0.00 39.67 5.25
11 12 0.734253 CCTCCTCTCGTTTGTCGCTG 60.734 60.000 0.00 0.00 39.67 5.18
12 13 0.894184 TCCTCCTCTCGTTTGTCGCT 60.894 55.000 0.00 0.00 39.67 4.93
13 14 0.456995 CTCCTCCTCTCGTTTGTCGC 60.457 60.000 0.00 0.00 39.67 5.19
14 15 0.171455 CCTCCTCCTCTCGTTTGTCG 59.829 60.000 0.00 0.00 41.41 4.35
15 16 1.474879 CTCCTCCTCCTCTCGTTTGTC 59.525 57.143 0.00 0.00 0.00 3.18
16 17 1.551452 CTCCTCCTCCTCTCGTTTGT 58.449 55.000 0.00 0.00 0.00 2.83
17 18 0.820871 CCTCCTCCTCCTCTCGTTTG 59.179 60.000 0.00 0.00 0.00 2.93
18 19 0.324830 CCCTCCTCCTCCTCTCGTTT 60.325 60.000 0.00 0.00 0.00 3.60
19 20 1.308326 CCCTCCTCCTCCTCTCGTT 59.692 63.158 0.00 0.00 0.00 3.85
20 21 2.695970 CCCCTCCTCCTCCTCTCGT 61.696 68.421 0.00 0.00 0.00 4.18
21 22 1.354168 TACCCCTCCTCCTCCTCTCG 61.354 65.000 0.00 0.00 0.00 4.04
22 23 1.163408 ATACCCCTCCTCCTCCTCTC 58.837 60.000 0.00 0.00 0.00 3.20
23 24 2.088709 TCTATACCCCTCCTCCTCCTCT 60.089 54.545 0.00 0.00 0.00 3.69
24 25 2.310647 CTCTATACCCCTCCTCCTCCTC 59.689 59.091 0.00 0.00 0.00 3.71
29 30 2.225167 CCTGTCTCTATACCCCTCCTCC 60.225 59.091 0.00 0.00 0.00 4.30
39 40 3.578716 GCAACCATAGCCCTGTCTCTATA 59.421 47.826 0.00 0.00 0.00 1.31
44 45 1.609783 GGCAACCATAGCCCTGTCT 59.390 57.895 0.00 0.00 46.50 3.41
60 61 2.288961 TTTAAGTCGGACGATGAGGC 57.711 50.000 1.89 0.00 0.00 4.70
111 112 3.204827 GCATTCATGGCGCGGTCT 61.205 61.111 8.83 0.00 0.00 3.85
118 120 0.745845 AGTGAGGACGCATTCATGGC 60.746 55.000 0.00 0.00 0.00 4.40
135 137 1.112950 GGCGCCTCCTCTAGTTTAGT 58.887 55.000 22.15 0.00 0.00 2.24
137 139 1.389609 CGGGCGCCTCCTCTAGTTTA 61.390 60.000 28.56 0.00 34.39 2.01
155 157 0.248215 GGAAAGTCATGCATTCGCCG 60.248 55.000 0.00 0.00 37.32 6.46
157 159 0.863119 GCGGAAAGTCATGCATTCGC 60.863 55.000 0.00 0.00 39.24 4.70
159 161 0.447801 ACGCGGAAAGTCATGCATTC 59.552 50.000 12.47 0.00 0.00 2.67
160 162 0.168788 CACGCGGAAAGTCATGCATT 59.831 50.000 12.47 0.00 0.00 3.56
164 166 1.635663 GACCCACGCGGAAAGTCATG 61.636 60.000 12.47 0.00 34.64 3.07
165 167 1.375523 GACCCACGCGGAAAGTCAT 60.376 57.895 12.47 0.00 34.64 3.06
175 177 2.303549 CTGATGAGAGGGACCCACGC 62.304 65.000 14.60 9.27 0.00 5.34
176 178 0.972983 ACTGATGAGAGGGACCCACG 60.973 60.000 14.60 0.00 0.00 4.94
178 180 0.325671 GGACTGATGAGAGGGACCCA 60.326 60.000 14.60 0.00 0.00 4.51
188 190 2.616256 GCCTGTCACATTGGACTGATGA 60.616 50.000 11.19 0.00 38.55 2.92
196 198 3.027170 GACGCGCCTGTCACATTGG 62.027 63.158 5.73 0.00 38.75 3.16
221 223 2.017049 GAAATTGGTGAGGTCCGGATG 58.983 52.381 7.81 0.00 0.00 3.51
223 225 0.036765 CGAAATTGGTGAGGTCCGGA 60.037 55.000 0.00 0.00 0.00 5.14
225 227 1.463444 GAACGAAATTGGTGAGGTCCG 59.537 52.381 0.00 0.00 0.00 4.79
233 235 3.750371 TCACATCTGGAACGAAATTGGT 58.250 40.909 0.00 0.00 0.00 3.67
234 236 3.753272 ACTCACATCTGGAACGAAATTGG 59.247 43.478 0.00 0.00 0.00 3.16
237 239 3.753272 CCAACTCACATCTGGAACGAAAT 59.247 43.478 0.00 0.00 31.38 2.17
242 244 2.568623 ACCCAACTCACATCTGGAAC 57.431 50.000 0.00 0.00 31.38 3.62
248 250 4.023707 CACTTCTCAAACCCAACTCACATC 60.024 45.833 0.00 0.00 0.00 3.06
251 253 2.033424 GCACTTCTCAAACCCAACTCAC 59.967 50.000 0.00 0.00 0.00 3.51
256 258 0.821711 CCCGCACTTCTCAAACCCAA 60.822 55.000 0.00 0.00 0.00 4.12
281 283 0.039618 AACCAGCCCCATAAGTGTGG 59.960 55.000 0.00 0.00 39.05 4.17
284 286 2.094675 CTCAAACCAGCCCCATAAGTG 58.905 52.381 0.00 0.00 0.00 3.16
286 288 1.686115 CCCTCAAACCAGCCCCATAAG 60.686 57.143 0.00 0.00 0.00 1.73
287 289 0.334676 CCCTCAAACCAGCCCCATAA 59.665 55.000 0.00 0.00 0.00 1.90
291 293 3.264845 TCCCCTCAAACCAGCCCC 61.265 66.667 0.00 0.00 0.00 5.80
293 295 1.303643 CTGTCCCCTCAAACCAGCC 60.304 63.158 0.00 0.00 0.00 4.85
296 298 0.107831 CGAACTGTCCCCTCAAACCA 59.892 55.000 0.00 0.00 0.00 3.67
297 299 0.605589 CCGAACTGTCCCCTCAAACC 60.606 60.000 0.00 0.00 0.00 3.27
298 300 0.108019 ACCGAACTGTCCCCTCAAAC 59.892 55.000 0.00 0.00 0.00 2.93
319 321 1.148310 AGTGACCAGTCGCGAAAATG 58.852 50.000 12.06 10.47 44.29 2.32
320 322 2.735134 GTTAGTGACCAGTCGCGAAAAT 59.265 45.455 12.06 0.00 44.29 1.82
321 323 2.129607 GTTAGTGACCAGTCGCGAAAA 58.870 47.619 12.06 1.76 44.29 2.29
354 356 2.747855 CCGCTCCTCAAACTGGCC 60.748 66.667 0.00 0.00 0.00 5.36
358 360 1.073199 CCCAACCGCTCCTCAAACT 59.927 57.895 0.00 0.00 0.00 2.66
367 369 1.161843 CAAAATACGACCCAACCGCT 58.838 50.000 0.00 0.00 0.00 5.52
368 370 1.135888 GTCAAAATACGACCCAACCGC 60.136 52.381 0.00 0.00 0.00 5.68
369 371 1.127213 CGTCAAAATACGACCCAACCG 59.873 52.381 0.00 0.00 45.68 4.44
386 388 0.803117 TCAGTGAGTGATCGGTCGTC 59.197 55.000 0.00 0.00 0.00 4.20
392 394 0.524392 GACGGCTCAGTGAGTGATCG 60.524 60.000 21.06 19.45 37.59 3.69
393 395 0.179124 GGACGGCTCAGTGAGTGATC 60.179 60.000 21.06 14.63 33.51 2.92
394 396 1.893786 GGACGGCTCAGTGAGTGAT 59.106 57.895 21.06 6.92 33.51 3.06
400 402 4.662961 TGCACGGACGGCTCAGTG 62.663 66.667 7.52 7.52 43.37 3.66
403 405 4.357947 GTCTGCACGGACGGCTCA 62.358 66.667 0.00 0.00 0.00 4.26
412 414 1.742761 AATTCCCTCATGTCTGCACG 58.257 50.000 0.00 0.00 0.00 5.34
423 425 5.922544 CACATGTCAAAACTCAAATTCCCTC 59.077 40.000 0.00 0.00 0.00 4.30
424 426 5.221501 CCACATGTCAAAACTCAAATTCCCT 60.222 40.000 0.00 0.00 0.00 4.20
425 427 4.990426 CCACATGTCAAAACTCAAATTCCC 59.010 41.667 0.00 0.00 0.00 3.97
426 428 5.600696 ACCACATGTCAAAACTCAAATTCC 58.399 37.500 0.00 0.00 0.00 3.01
430 788 6.951062 TGATACCACATGTCAAAACTCAAA 57.049 33.333 0.00 0.00 0.00 2.69
445 803 6.652481 CAGGGAAAGATATCACATGATACCAC 59.348 42.308 5.32 0.44 39.57 4.16
464 822 0.392461 GCGTGCCATAGAACAGGGAA 60.392 55.000 0.00 0.00 0.00 3.97
465 823 1.220749 GCGTGCCATAGAACAGGGA 59.779 57.895 0.00 0.00 0.00 4.20
497 856 4.675510 ACGTTCGTCTAACAGAAACTTGA 58.324 39.130 0.00 0.00 38.03 3.02
551 910 1.278985 TGGATAGGCAGGTGACAACTG 59.721 52.381 16.53 16.53 38.95 3.16
578 937 5.478332 AGACAAGGAGCGATGTGATATATCA 59.522 40.000 11.49 11.49 0.00 2.15
601 960 2.852495 ATCTTACCGGGTGCGTGCAG 62.852 60.000 10.66 0.00 0.00 4.41
626 985 2.375174 GGGATATGGGGCACATCACTTA 59.625 50.000 4.97 0.00 41.03 2.24
742 1102 1.383803 GAGGCAGAGGGATCTGGGT 60.384 63.158 7.33 0.00 38.14 4.51
743 1103 1.074623 AGAGGCAGAGGGATCTGGG 60.075 63.158 7.33 0.00 38.14 4.45
853 1213 2.433318 GCGGTGACACAGAGAGGC 60.433 66.667 10.10 0.00 0.00 4.70
870 1230 2.167281 CTCCATGACACAGAGGTACCAG 59.833 54.545 15.94 6.06 0.00 4.00
935 1301 2.739913 CCAAACAAAATCGAGGTAGCGA 59.260 45.455 0.00 0.00 45.22 4.93
936 1302 2.482721 ACCAAACAAAATCGAGGTAGCG 59.517 45.455 0.00 0.00 0.00 4.26
937 1303 4.499037 AACCAAACAAAATCGAGGTAGC 57.501 40.909 0.00 0.00 0.00 3.58
970 1341 3.668757 CGTCGGTGAAACGAACTGAGATA 60.669 47.826 0.00 0.00 45.38 1.98
989 1360 3.774959 ATGGCCATCGTCGCTCGTC 62.775 63.158 14.09 0.00 40.80 4.20
990 1361 3.838271 ATGGCCATCGTCGCTCGT 61.838 61.111 14.09 0.00 40.80 4.18
991 1362 3.333189 CATGGCCATCGTCGCTCG 61.333 66.667 17.61 0.00 41.41 5.03
992 1363 2.969238 CCATGGCCATCGTCGCTC 60.969 66.667 17.61 0.00 0.00 5.03
1023 1394 4.156622 TAGAGCGACGCCACGACG 62.157 66.667 17.79 7.44 45.90 5.12
1112 1486 3.148279 CGCTCCTCCCTACCGCTT 61.148 66.667 0.00 0.00 0.00 4.68
1460 1837 3.960571 AGAGAAGCAATACTGGCAATGT 58.039 40.909 0.00 0.00 0.00 2.71
1467 1847 7.301054 CAACCAAGTAAAGAGAAGCAATACTG 58.699 38.462 0.00 0.00 0.00 2.74
1477 1857 4.260456 CGAAAACGCAACCAAGTAAAGAGA 60.260 41.667 0.00 0.00 0.00 3.10
1496 1876 8.547967 AATAGTTGATTAGTTGAAGCTCGAAA 57.452 30.769 0.00 0.00 0.00 3.46
1531 1911 5.750484 TGCGTACACGTCTTGTTTATTAG 57.250 39.130 3.44 0.00 39.91 1.73
1536 1921 1.796459 GGATGCGTACACGTCTTGTTT 59.204 47.619 3.44 0.00 39.91 2.83
1598 1983 4.478206 TGAAACAGAGGGAATAGCTGAG 57.522 45.455 0.00 0.00 33.94 3.35
1602 1987 7.391148 TGTTAATTGAAACAGAGGGAATAGC 57.609 36.000 0.00 0.00 34.50 2.97
1629 2016 1.075542 CTTTTAGGATGCGTGCACGA 58.924 50.000 41.19 25.87 43.02 4.35
1759 2147 8.617290 ATTAGACCGACCAAATTGGATTATAC 57.383 34.615 20.25 5.53 40.96 1.47
1794 2183 7.028805 TGCGCGTGAATTTTAAAATAACTTC 57.971 32.000 13.68 9.03 0.00 3.01
1801 2190 6.994868 ATAAGTTGCGCGTGAATTTTAAAA 57.005 29.167 8.43 2.51 0.00 1.52
1893 2283 8.124199 CCACTTTTTCACAAAAATGGAAATCTG 58.876 33.333 2.43 0.00 39.13 2.90
1951 2341 8.912988 AGCCATCTTCTATAGCTATAAGTGATC 58.087 37.037 14.30 7.24 30.46 2.92
1952 2342 8.837099 AGCCATCTTCTATAGCTATAAGTGAT 57.163 34.615 14.30 13.21 30.46 3.06
1977 2369 2.034436 AAACCGGAAAGGAGGGAGTA 57.966 50.000 9.46 0.00 45.00 2.59
1978 2370 2.034436 TAAACCGGAAAGGAGGGAGT 57.966 50.000 9.46 0.00 45.00 3.85
1979 2371 3.071167 CCTATAAACCGGAAAGGAGGGAG 59.929 52.174 9.46 0.00 45.00 4.30
1980 2372 3.043418 CCTATAAACCGGAAAGGAGGGA 58.957 50.000 9.46 0.00 45.00 4.20
1981 2373 2.486727 GCCTATAAACCGGAAAGGAGGG 60.487 54.545 9.46 2.90 45.00 4.30
1982 2374 2.438392 AGCCTATAAACCGGAAAGGAGG 59.562 50.000 9.46 10.35 45.00 4.30
1983 2375 3.840124 AGCCTATAAACCGGAAAGGAG 57.160 47.619 9.46 0.00 45.00 3.69
1984 2376 5.605488 AGATAAGCCTATAAACCGGAAAGGA 59.395 40.000 9.46 0.00 45.00 3.36
1986 2378 8.897872 TTAAGATAAGCCTATAAACCGGAAAG 57.102 34.615 9.46 0.00 0.00 2.62
1987 2379 9.683870 TTTTAAGATAAGCCTATAAACCGGAAA 57.316 29.630 9.46 0.00 0.00 3.13
1988 2380 9.856162 ATTTTAAGATAAGCCTATAAACCGGAA 57.144 29.630 9.46 0.00 0.00 4.30
1989 2381 9.856162 AATTTTAAGATAAGCCTATAAACCGGA 57.144 29.630 9.46 0.00 0.00 5.14
2023 2415 9.434420 CAACCAAATTGAGCCTTATAAAATGAA 57.566 29.630 0.00 0.00 41.23 2.57
2024 2416 8.592809 ACAACCAAATTGAGCCTTATAAAATGA 58.407 29.630 0.00 0.00 41.23 2.57
2025 2417 8.776376 ACAACCAAATTGAGCCTTATAAAATG 57.224 30.769 0.00 0.00 41.23 2.32
2026 2418 9.435688 GAACAACCAAATTGAGCCTTATAAAAT 57.564 29.630 0.00 0.00 41.23 1.82
2027 2419 7.875554 GGAACAACCAAATTGAGCCTTATAAAA 59.124 33.333 0.00 0.00 41.23 1.52
2028 2420 7.382898 GGAACAACCAAATTGAGCCTTATAAA 58.617 34.615 0.00 0.00 41.23 1.40
2029 2421 6.071051 GGGAACAACCAAATTGAGCCTTATAA 60.071 38.462 0.00 0.00 41.23 0.98
2030 2422 5.420739 GGGAACAACCAAATTGAGCCTTATA 59.579 40.000 0.00 0.00 41.23 0.98
2031 2423 4.222810 GGGAACAACCAAATTGAGCCTTAT 59.777 41.667 0.00 0.00 41.23 1.73
2032 2424 3.576550 GGGAACAACCAAATTGAGCCTTA 59.423 43.478 0.00 0.00 41.23 2.69
2033 2425 2.368548 GGGAACAACCAAATTGAGCCTT 59.631 45.455 0.00 0.00 41.23 4.35
2034 2426 1.970640 GGGAACAACCAAATTGAGCCT 59.029 47.619 0.00 0.00 41.23 4.58
2035 2427 1.970640 AGGGAACAACCAAATTGAGCC 59.029 47.619 0.00 0.00 41.23 4.70
2036 2428 4.462483 TGATAGGGAACAACCAAATTGAGC 59.538 41.667 0.00 0.00 41.23 4.26
2037 2429 5.476599 TGTGATAGGGAACAACCAAATTGAG 59.523 40.000 0.00 0.00 41.23 3.02
2038 2430 5.389520 TGTGATAGGGAACAACCAAATTGA 58.610 37.500 0.00 0.00 41.23 2.57
2039 2431 5.720371 TGTGATAGGGAACAACCAAATTG 57.280 39.130 0.00 0.00 44.60 2.32
2040 2432 5.779771 ACATGTGATAGGGAACAACCAAATT 59.220 36.000 0.00 0.00 41.20 1.82
2041 2433 5.332743 ACATGTGATAGGGAACAACCAAAT 58.667 37.500 0.00 0.00 41.20 2.32
2042 2434 4.735369 ACATGTGATAGGGAACAACCAAA 58.265 39.130 0.00 0.00 41.20 3.28
2043 2435 4.380843 ACATGTGATAGGGAACAACCAA 57.619 40.909 0.00 0.00 41.20 3.67
2044 2436 4.202514 TGAACATGTGATAGGGAACAACCA 60.203 41.667 0.00 0.00 41.20 3.67
2045 2437 4.331968 TGAACATGTGATAGGGAACAACC 58.668 43.478 0.00 0.00 38.08 3.77
2046 2438 5.245531 TCTGAACATGTGATAGGGAACAAC 58.754 41.667 0.00 0.00 0.00 3.32
2047 2439 5.497464 TCTGAACATGTGATAGGGAACAA 57.503 39.130 0.00 0.00 0.00 2.83
2048 2440 5.698741 ATCTGAACATGTGATAGGGAACA 57.301 39.130 0.00 0.00 0.00 3.18
2049 2441 5.529060 GGAATCTGAACATGTGATAGGGAAC 59.471 44.000 0.00 0.00 0.00 3.62
2050 2442 5.191522 TGGAATCTGAACATGTGATAGGGAA 59.808 40.000 0.00 0.00 0.00 3.97
2051 2443 4.721274 TGGAATCTGAACATGTGATAGGGA 59.279 41.667 0.00 0.00 0.00 4.20
2052 2444 5.039920 TGGAATCTGAACATGTGATAGGG 57.960 43.478 0.00 0.00 0.00 3.53
2053 2445 5.530171 CCTTGGAATCTGAACATGTGATAGG 59.470 44.000 0.00 0.00 0.00 2.57
2054 2446 6.118170 ACCTTGGAATCTGAACATGTGATAG 58.882 40.000 0.00 0.00 0.00 2.08
2055 2447 6.065976 ACCTTGGAATCTGAACATGTGATA 57.934 37.500 0.00 0.00 0.00 2.15
2056 2448 4.927049 ACCTTGGAATCTGAACATGTGAT 58.073 39.130 0.00 0.00 0.00 3.06
2057 2449 4.371624 ACCTTGGAATCTGAACATGTGA 57.628 40.909 0.00 0.00 0.00 3.58
2058 2450 5.003160 TGTACCTTGGAATCTGAACATGTG 58.997 41.667 0.00 0.00 0.00 3.21
2059 2451 5.241403 TGTACCTTGGAATCTGAACATGT 57.759 39.130 0.00 0.00 0.00 3.21
2060 2452 6.764308 AATGTACCTTGGAATCTGAACATG 57.236 37.500 0.00 0.00 0.00 3.21
2061 2453 8.877864 TTTAATGTACCTTGGAATCTGAACAT 57.122 30.769 0.00 0.00 0.00 2.71
2062 2454 8.877864 ATTTAATGTACCTTGGAATCTGAACA 57.122 30.769 0.00 0.00 0.00 3.18
2063 2455 8.956426 TGATTTAATGTACCTTGGAATCTGAAC 58.044 33.333 15.72 0.00 0.00 3.18
2064 2456 9.699410 ATGATTTAATGTACCTTGGAATCTGAA 57.301 29.630 15.72 4.58 0.00 3.02
2065 2457 9.699410 AATGATTTAATGTACCTTGGAATCTGA 57.301 29.630 15.72 0.00 0.00 3.27
2066 2458 9.740239 CAATGATTTAATGTACCTTGGAATCTG 57.260 33.333 15.72 8.47 0.00 2.90
2067 2459 8.416329 GCAATGATTTAATGTACCTTGGAATCT 58.584 33.333 15.72 6.09 0.00 2.40
2068 2460 8.196771 TGCAATGATTTAATGTACCTTGGAATC 58.803 33.333 11.43 11.43 0.00 2.52
2069 2461 8.076910 TGCAATGATTTAATGTACCTTGGAAT 57.923 30.769 0.00 0.00 0.00 3.01
2070 2462 7.473735 TGCAATGATTTAATGTACCTTGGAA 57.526 32.000 0.00 0.00 0.00 3.53
2071 2463 7.658525 ATGCAATGATTTAATGTACCTTGGA 57.341 32.000 0.00 0.00 0.00 3.53
2089 2481 9.880157 AATTTTCTCTTAATACTTGCATGCAAT 57.120 25.926 31.96 22.79 35.20 3.56
2090 2482 9.142515 CAATTTTCTCTTAATACTTGCATGCAA 57.857 29.630 30.12 30.12 0.00 4.08
2091 2483 8.522003 TCAATTTTCTCTTAATACTTGCATGCA 58.478 29.630 18.46 18.46 0.00 3.96
2092 2484 8.915871 TCAATTTTCTCTTAATACTTGCATGC 57.084 30.769 11.82 11.82 0.00 4.06
2141 2533 7.485418 ACCAATGTATTAATTGCAATGCATG 57.515 32.000 13.82 0.00 39.41 4.06
2142 2534 9.610705 TTTACCAATGTATTAATTGCAATGCAT 57.389 25.926 13.82 10.48 41.27 3.96
2143 2535 8.877779 GTTTACCAATGTATTAATTGCAATGCA 58.122 29.630 13.82 2.72 36.42 3.96
2144 2536 8.877779 TGTTTACCAATGTATTAATTGCAATGC 58.122 29.630 13.82 0.00 36.42 3.56
2175 2567 9.612066 AATTAATGCTCTTGTTTTCCTCAAAAA 57.388 25.926 0.00 0.00 33.17 1.94
2176 2568 9.044150 CAATTAATGCTCTTGTTTTCCTCAAAA 57.956 29.630 0.00 0.00 0.00 2.44
2177 2569 7.656948 CCAATTAATGCTCTTGTTTTCCTCAAA 59.343 33.333 0.00 0.00 0.00 2.69
2178 2570 7.153985 CCAATTAATGCTCTTGTTTTCCTCAA 58.846 34.615 0.00 0.00 0.00 3.02
2179 2571 6.295236 CCCAATTAATGCTCTTGTTTTCCTCA 60.295 38.462 0.00 0.00 0.00 3.86
2180 2572 6.101997 CCCAATTAATGCTCTTGTTTTCCTC 58.898 40.000 0.00 0.00 0.00 3.71
2181 2573 5.543790 ACCCAATTAATGCTCTTGTTTTCCT 59.456 36.000 0.00 0.00 0.00 3.36
2182 2574 5.639082 CACCCAATTAATGCTCTTGTTTTCC 59.361 40.000 0.00 0.00 0.00 3.13
2183 2575 6.223120 ACACCCAATTAATGCTCTTGTTTTC 58.777 36.000 0.00 0.00 0.00 2.29
2184 2576 6.173427 ACACCCAATTAATGCTCTTGTTTT 57.827 33.333 0.00 0.00 0.00 2.43
2185 2577 5.806654 ACACCCAATTAATGCTCTTGTTT 57.193 34.783 0.00 0.00 0.00 2.83
2186 2578 5.806654 AACACCCAATTAATGCTCTTGTT 57.193 34.783 0.00 0.00 0.00 2.83
2187 2579 5.806654 AAACACCCAATTAATGCTCTTGT 57.193 34.783 0.00 0.00 0.00 3.16
2188 2580 7.655328 TGTAAAAACACCCAATTAATGCTCTTG 59.345 33.333 0.00 0.00 0.00 3.02
2189 2581 7.731054 TGTAAAAACACCCAATTAATGCTCTT 58.269 30.769 0.00 0.00 0.00 2.85
2190 2582 7.296628 TGTAAAAACACCCAATTAATGCTCT 57.703 32.000 0.00 0.00 0.00 4.09
2191 2583 7.954788 TTGTAAAAACACCCAATTAATGCTC 57.045 32.000 0.00 0.00 0.00 4.26
2192 2584 7.990314 AGTTTGTAAAAACACCCAATTAATGCT 59.010 29.630 11.11 0.00 35.20 3.79
2193 2585 8.148807 AGTTTGTAAAAACACCCAATTAATGC 57.851 30.769 11.11 0.00 35.20 3.56
2198 2590 9.503399 TTTTGTAGTTTGTAAAAACACCCAATT 57.497 25.926 11.11 0.00 35.20 2.32
2199 2591 9.503399 TTTTTGTAGTTTGTAAAAACACCCAAT 57.497 25.926 11.11 0.00 35.20 3.16
2200 2592 8.897872 TTTTTGTAGTTTGTAAAAACACCCAA 57.102 26.923 11.11 7.21 35.20 4.12
2201 2593 8.148999 ACTTTTTGTAGTTTGTAAAAACACCCA 58.851 29.630 11.11 1.67 35.20 4.51
2202 2594 8.537049 ACTTTTTGTAGTTTGTAAAAACACCC 57.463 30.769 11.11 0.00 35.20 4.61
2210 2602 9.186837 TGGTGGAATACTTTTTGTAGTTTGTAA 57.813 29.630 0.00 0.00 34.24 2.41
2211 2603 8.623030 GTGGTGGAATACTTTTTGTAGTTTGTA 58.377 33.333 0.00 0.00 34.24 2.41
2212 2604 7.340999 AGTGGTGGAATACTTTTTGTAGTTTGT 59.659 33.333 0.00 0.00 34.24 2.83
2213 2605 7.712797 AGTGGTGGAATACTTTTTGTAGTTTG 58.287 34.615 0.00 0.00 34.24 2.93
2214 2606 7.558444 TGAGTGGTGGAATACTTTTTGTAGTTT 59.442 33.333 0.00 0.00 34.24 2.66
2215 2607 7.012989 GTGAGTGGTGGAATACTTTTTGTAGTT 59.987 37.037 0.00 0.00 34.24 2.24
2216 2608 6.485648 GTGAGTGGTGGAATACTTTTTGTAGT 59.514 38.462 0.00 0.00 34.24 2.73
2217 2609 6.072673 GGTGAGTGGTGGAATACTTTTTGTAG 60.073 42.308 0.00 0.00 34.24 2.74
2218 2610 5.766174 GGTGAGTGGTGGAATACTTTTTGTA 59.234 40.000 0.00 0.00 35.37 2.41
2219 2611 4.583073 GGTGAGTGGTGGAATACTTTTTGT 59.417 41.667 0.00 0.00 0.00 2.83
2220 2612 4.582656 TGGTGAGTGGTGGAATACTTTTTG 59.417 41.667 0.00 0.00 0.00 2.44
2221 2613 4.798882 TGGTGAGTGGTGGAATACTTTTT 58.201 39.130 0.00 0.00 0.00 1.94
2222 2614 4.447138 TGGTGAGTGGTGGAATACTTTT 57.553 40.909 0.00 0.00 0.00 2.27
2223 2615 4.289672 AGATGGTGAGTGGTGGAATACTTT 59.710 41.667 0.00 0.00 0.00 2.66
2224 2616 3.846588 AGATGGTGAGTGGTGGAATACTT 59.153 43.478 0.00 0.00 0.00 2.24
2225 2617 3.454858 AGATGGTGAGTGGTGGAATACT 58.545 45.455 0.00 0.00 0.00 2.12
2226 2618 3.914426 AGATGGTGAGTGGTGGAATAC 57.086 47.619 0.00 0.00 0.00 1.89
2227 2619 3.709653 GGTAGATGGTGAGTGGTGGAATA 59.290 47.826 0.00 0.00 0.00 1.75
2228 2620 2.505819 GGTAGATGGTGAGTGGTGGAAT 59.494 50.000 0.00 0.00 0.00 3.01
2229 2621 1.906574 GGTAGATGGTGAGTGGTGGAA 59.093 52.381 0.00 0.00 0.00 3.53
2230 2622 1.078823 AGGTAGATGGTGAGTGGTGGA 59.921 52.381 0.00 0.00 0.00 4.02
2231 2623 1.573108 AGGTAGATGGTGAGTGGTGG 58.427 55.000 0.00 0.00 0.00 4.61
2232 2624 2.303022 ACAAGGTAGATGGTGAGTGGTG 59.697 50.000 0.00 0.00 0.00 4.17
2233 2625 2.621070 ACAAGGTAGATGGTGAGTGGT 58.379 47.619 0.00 0.00 0.00 4.16
2234 2626 3.703001 AACAAGGTAGATGGTGAGTGG 57.297 47.619 0.00 0.00 0.00 4.00
2235 2627 3.753272 CCAAACAAGGTAGATGGTGAGTG 59.247 47.826 0.00 0.00 0.00 3.51
2236 2628 3.394606 ACCAAACAAGGTAGATGGTGAGT 59.605 43.478 0.00 0.00 42.57 3.41
2237 2629 4.021102 ACCAAACAAGGTAGATGGTGAG 57.979 45.455 0.00 0.00 42.57 3.51
2240 2632 3.650942 TCTCACCAAACAAGGTAGATGGT 59.349 43.478 0.00 0.00 44.95 3.55
2241 2633 4.286297 TCTCACCAAACAAGGTAGATGG 57.714 45.455 0.00 0.00 40.77 3.51
2242 2634 6.824305 AAATCTCACCAAACAAGGTAGATG 57.176 37.500 0.00 0.00 40.77 2.90
2243 2635 7.505585 TCAAAAATCTCACCAAACAAGGTAGAT 59.494 33.333 0.00 0.00 40.77 1.98
2244 2636 6.831353 TCAAAAATCTCACCAAACAAGGTAGA 59.169 34.615 0.00 0.00 40.77 2.59
2245 2637 7.038154 TCAAAAATCTCACCAAACAAGGTAG 57.962 36.000 0.00 0.00 40.77 3.18
2246 2638 7.411486 TTCAAAAATCTCACCAAACAAGGTA 57.589 32.000 0.00 0.00 40.77 3.08
2247 2639 5.930837 TCAAAAATCTCACCAAACAAGGT 57.069 34.783 0.00 0.00 44.48 3.50
2248 2640 7.495279 TCAATTCAAAAATCTCACCAAACAAGG 59.505 33.333 0.00 0.00 0.00 3.61
2249 2641 8.422973 TCAATTCAAAAATCTCACCAAACAAG 57.577 30.769 0.00 0.00 0.00 3.16
2250 2642 7.011295 GCTCAATTCAAAAATCTCACCAAACAA 59.989 33.333 0.00 0.00 0.00 2.83
2251 2643 6.479660 GCTCAATTCAAAAATCTCACCAAACA 59.520 34.615 0.00 0.00 0.00 2.83
2252 2644 6.073602 GGCTCAATTCAAAAATCTCACCAAAC 60.074 38.462 0.00 0.00 0.00 2.93
2253 2645 5.990996 GGCTCAATTCAAAAATCTCACCAAA 59.009 36.000 0.00 0.00 0.00 3.28
2254 2646 5.511202 GGGCTCAATTCAAAAATCTCACCAA 60.511 40.000 0.00 0.00 0.00 3.67
2255 2647 4.021192 GGGCTCAATTCAAAAATCTCACCA 60.021 41.667 0.00 0.00 0.00 4.17
2256 2648 4.221482 AGGGCTCAATTCAAAAATCTCACC 59.779 41.667 0.00 0.00 0.00 4.02
2257 2649 5.397142 AGGGCTCAATTCAAAAATCTCAC 57.603 39.130 0.00 0.00 0.00 3.51
2258 2650 8.821686 TTATAGGGCTCAATTCAAAAATCTCA 57.178 30.769 0.00 0.00 0.00 3.27
2259 2651 9.521503 GTTTATAGGGCTCAATTCAAAAATCTC 57.478 33.333 0.00 0.00 0.00 2.75
2260 2652 8.478066 GGTTTATAGGGCTCAATTCAAAAATCT 58.522 33.333 0.00 0.00 0.00 2.40
2261 2653 7.435192 CGGTTTATAGGGCTCAATTCAAAAATC 59.565 37.037 0.00 0.00 0.00 2.17
2262 2654 7.264947 CGGTTTATAGGGCTCAATTCAAAAAT 58.735 34.615 0.00 0.00 0.00 1.82
2263 2655 6.350612 CCGGTTTATAGGGCTCAATTCAAAAA 60.351 38.462 0.00 0.00 0.00 1.94
2264 2656 5.126384 CCGGTTTATAGGGCTCAATTCAAAA 59.874 40.000 0.00 0.00 0.00 2.44
2265 2657 4.642885 CCGGTTTATAGGGCTCAATTCAAA 59.357 41.667 0.00 0.00 0.00 2.69
2266 2658 4.080243 TCCGGTTTATAGGGCTCAATTCAA 60.080 41.667 0.00 0.00 0.00 2.69
2267 2659 3.456644 TCCGGTTTATAGGGCTCAATTCA 59.543 43.478 0.00 0.00 0.00 2.57
2268 2660 4.081322 TCCGGTTTATAGGGCTCAATTC 57.919 45.455 0.00 0.00 0.00 2.17
2269 2661 4.513406 TTCCGGTTTATAGGGCTCAATT 57.487 40.909 0.00 0.00 0.00 2.32
2270 2662 4.461198 CTTTCCGGTTTATAGGGCTCAAT 58.539 43.478 0.00 0.00 0.00 2.57
2271 2663 3.371166 CCTTTCCGGTTTATAGGGCTCAA 60.371 47.826 0.00 0.00 0.00 3.02
2272 2664 2.171870 CCTTTCCGGTTTATAGGGCTCA 59.828 50.000 0.00 0.00 0.00 4.26
2273 2665 2.436911 TCCTTTCCGGTTTATAGGGCTC 59.563 50.000 0.00 0.00 0.00 4.70
2274 2666 2.438392 CTCCTTTCCGGTTTATAGGGCT 59.562 50.000 0.00 0.00 0.00 5.19
2275 2667 2.486727 CCTCCTTTCCGGTTTATAGGGC 60.487 54.545 0.00 0.00 0.00 5.19
2276 2668 2.105993 CCCTCCTTTCCGGTTTATAGGG 59.894 54.545 16.03 16.03 36.05 3.53
2277 2669 3.043418 TCCCTCCTTTCCGGTTTATAGG 58.957 50.000 0.00 4.62 0.00 2.57
2278 2670 3.710165 ACTCCCTCCTTTCCGGTTTATAG 59.290 47.826 0.00 0.00 0.00 1.31
2279 2671 3.727948 ACTCCCTCCTTTCCGGTTTATA 58.272 45.455 0.00 0.00 0.00 0.98
2280 2672 2.558974 ACTCCCTCCTTTCCGGTTTAT 58.441 47.619 0.00 0.00 0.00 1.40
2281 2673 2.034436 ACTCCCTCCTTTCCGGTTTA 57.966 50.000 0.00 0.00 0.00 2.01
2282 2674 2.034436 TACTCCCTCCTTTCCGGTTT 57.966 50.000 0.00 0.00 0.00 3.27
2283 2675 1.838077 CATACTCCCTCCTTTCCGGTT 59.162 52.381 0.00 0.00 0.00 4.44
2284 2676 1.273666 ACATACTCCCTCCTTTCCGGT 60.274 52.381 0.00 0.00 0.00 5.28
2285 2677 1.139058 CACATACTCCCTCCTTTCCGG 59.861 57.143 0.00 0.00 0.00 5.14
2286 2678 2.108168 TCACATACTCCCTCCTTTCCG 58.892 52.381 0.00 0.00 0.00 4.30
2287 2679 5.308237 ACATATCACATACTCCCTCCTTTCC 59.692 44.000 0.00 0.00 0.00 3.13
2288 2680 6.183361 ACACATATCACATACTCCCTCCTTTC 60.183 42.308 0.00 0.00 0.00 2.62
2289 2681 5.667626 ACACATATCACATACTCCCTCCTTT 59.332 40.000 0.00 0.00 0.00 3.11
2290 2682 5.070981 CACACATATCACATACTCCCTCCTT 59.929 44.000 0.00 0.00 0.00 3.36
2291 2683 4.590647 CACACATATCACATACTCCCTCCT 59.409 45.833 0.00 0.00 0.00 3.69
2292 2684 4.345257 ACACACATATCACATACTCCCTCC 59.655 45.833 0.00 0.00 0.00 4.30
2293 2685 5.163405 ACACACACATATCACATACTCCCTC 60.163 44.000 0.00 0.00 0.00 4.30
2294 2686 4.716784 ACACACACATATCACATACTCCCT 59.283 41.667 0.00 0.00 0.00 4.20
2295 2687 4.811024 CACACACACATATCACATACTCCC 59.189 45.833 0.00 0.00 0.00 4.30
2296 2688 4.271049 GCACACACACATATCACATACTCC 59.729 45.833 0.00 0.00 0.00 3.85
2297 2689 5.006068 CAGCACACACACATATCACATACTC 59.994 44.000 0.00 0.00 0.00 2.59
2298 2690 4.872124 CAGCACACACACATATCACATACT 59.128 41.667 0.00 0.00 0.00 2.12
2299 2691 4.494690 GCAGCACACACACATATCACATAC 60.495 45.833 0.00 0.00 0.00 2.39
2300 2692 3.622612 GCAGCACACACACATATCACATA 59.377 43.478 0.00 0.00 0.00 2.29
2301 2693 2.421073 GCAGCACACACACATATCACAT 59.579 45.455 0.00 0.00 0.00 3.21
2306 2698 5.840243 AAATATGCAGCACACACACATAT 57.160 34.783 0.00 0.00 35.89 1.78
2307 2699 5.296531 CCTAAATATGCAGCACACACACATA 59.703 40.000 0.00 0.00 0.00 2.29
2316 2708 2.035066 CCTTGCCCTAAATATGCAGCAC 59.965 50.000 0.00 0.00 36.21 4.40
2403 2795 4.481112 CCCGCGAATGTTGGCTGC 62.481 66.667 8.23 0.00 0.00 5.25
2410 2802 1.153168 CCCTTCATCCCGCGAATGT 60.153 57.895 8.23 0.00 0.00 2.71
2413 2805 4.483243 GGCCCTTCATCCCGCGAA 62.483 66.667 8.23 0.00 0.00 4.70
2418 2810 1.966354 GAAATCATGGCCCTTCATCCC 59.034 52.381 0.00 0.00 0.00 3.85
2419 2811 2.954792 AGAAATCATGGCCCTTCATCC 58.045 47.619 0.00 0.00 0.00 3.51
2515 2907 0.257039 CCTGGCTGTATTTCTGGGCT 59.743 55.000 0.00 0.00 0.00 5.19
2571 2963 1.068921 GAAGATGGGCCGAGAGCTC 59.931 63.158 5.27 5.27 45.08 4.09
2638 3030 3.190874 GGAGAAGGAAATGCTCTGTACG 58.809 50.000 0.00 0.00 0.00 3.67
2639 3031 4.207891 TGGAGAAGGAAATGCTCTGTAC 57.792 45.455 0.00 0.00 0.00 2.90
2743 3140 2.225467 GCCCAGCCTACTCATTCAATC 58.775 52.381 0.00 0.00 0.00 2.67
2762 3159 3.127533 CCCACGTTAGGCAGCTGC 61.128 66.667 30.88 30.88 41.14 5.25
2785 3185 5.988092 TGTACCACGAGAAAAATAAAACCG 58.012 37.500 0.00 0.00 0.00 4.44
2839 3241 4.941263 ACGTACATGGTGCTGTAATCAAAT 59.059 37.500 0.00 0.00 33.59 2.32
2849 3251 2.912986 CACACACGTACATGGTGCT 58.087 52.632 0.00 0.00 38.98 4.40
3069 3471 0.320683 TTGTAGGAGTCGACGACGGA 60.321 55.000 21.44 6.25 37.67 4.69
3256 3665 1.195442 TACACAGCACCCCGGATGAA 61.195 55.000 0.73 0.00 0.00 2.57
3413 3822 6.125029 ACTACAGCATAGCCAATTTCTTGAT 58.875 36.000 0.00 0.00 34.04 2.57
3462 3879 6.015688 ACGGCTACTGCTAATACTAATGCTAA 60.016 38.462 0.00 0.00 39.59 3.09
3713 4141 2.274760 GCTTGCTGGGAGCTCCAT 59.725 61.111 33.29 0.00 46.01 3.41
3747 4175 1.361543 ACTAGCCCTCCACAACCTCTA 59.638 52.381 0.00 0.00 0.00 2.43
3764 4192 3.244770 GGTTGGGATTGAACTCCACACTA 60.245 47.826 0.00 0.00 37.01 2.74
3778 4206 1.077265 CTGCCTGTTGGGTTGGGAT 59.923 57.895 0.00 0.00 37.43 3.85
3781 4209 3.673484 CGCTGCCTGTTGGGTTGG 61.673 66.667 0.00 0.00 37.43 3.77
3800 4228 1.902938 AGAAGCTGAAACTGCCTTCC 58.097 50.000 0.00 0.00 0.00 3.46
3804 4232 1.902938 AGGAAGAAGCTGAAACTGCC 58.097 50.000 0.00 0.00 0.00 4.85
3806 4234 4.213059 GTGAGAAGGAAGAAGCTGAAACTG 59.787 45.833 0.00 0.00 0.00 3.16
3859 4288 4.181010 CGGAGGGAGTGGCCATGG 62.181 72.222 9.72 7.63 38.95 3.66
3874 4303 1.526917 GAGTGGCCATGGGAATCGG 60.527 63.158 9.72 0.00 0.00 4.18
3875 4304 1.526917 GGAGTGGCCATGGGAATCG 60.527 63.158 9.72 0.00 36.34 3.34
3883 4312 1.694169 AATCGGAGGGAGTGGCCAT 60.694 57.895 9.72 0.00 38.95 4.40
3885 4314 2.506472 GAATCGGAGGGAGTGGCC 59.494 66.667 0.00 0.00 0.00 5.36
3886 4315 2.506472 GGAATCGGAGGGAGTGGC 59.494 66.667 0.00 0.00 0.00 5.01
3887 4316 1.056700 ATGGGAATCGGAGGGAGTGG 61.057 60.000 0.00 0.00 0.00 4.00
3888 4317 0.107456 CATGGGAATCGGAGGGAGTG 59.893 60.000 0.00 0.00 0.00 3.51
3889 4318 1.056700 CCATGGGAATCGGAGGGAGT 61.057 60.000 2.85 0.00 0.00 3.85
3890 4319 1.757306 CCATGGGAATCGGAGGGAG 59.243 63.158 2.85 0.00 0.00 4.30
3891 4320 2.452064 GCCATGGGAATCGGAGGGA 61.452 63.158 15.13 0.00 0.00 4.20
3892 4321 2.113986 GCCATGGGAATCGGAGGG 59.886 66.667 15.13 0.00 0.00 4.30
3893 4322 2.113986 GGCCATGGGAATCGGAGG 59.886 66.667 15.13 0.00 0.00 4.30
3894 4323 1.228063 CTGGCCATGGGAATCGGAG 60.228 63.158 15.13 0.00 0.00 4.63
3895 4324 2.918248 CTGGCCATGGGAATCGGA 59.082 61.111 15.13 0.00 0.00 4.55
3896 4325 2.908940 GCTGGCCATGGGAATCGG 60.909 66.667 15.13 0.00 0.00 4.18
3897 4326 2.908940 GGCTGGCCATGGGAATCG 60.909 66.667 15.13 0.00 35.81 3.34
3898 4327 2.522680 GGGCTGGCCATGGGAATC 60.523 66.667 16.34 0.00 37.98 2.52
3899 4328 4.528039 CGGGCTGGCCATGGGAAT 62.528 66.667 21.03 0.00 37.98 3.01
3905 4334 3.092511 ATCTGACGGGCTGGCCAT 61.093 61.111 21.03 4.30 37.98 4.40
3908 4337 3.785859 TCCATCTGACGGGCTGGC 61.786 66.667 0.00 0.00 0.00 4.85
3917 4346 0.104855 GCTATGTGGCGTCCATCTGA 59.895 55.000 1.90 0.00 35.28 3.27
3919 4348 0.761187 ATGCTATGTGGCGTCCATCT 59.239 50.000 1.90 0.00 35.28 2.90
3924 4353 2.996621 GGAGATAATGCTATGTGGCGTC 59.003 50.000 0.00 0.00 34.52 5.19
3931 4360 9.499479 ACATTCAAACTAGGAGATAATGCTATG 57.501 33.333 0.00 0.00 30.56 2.23
3934 4363 7.568349 TCACATTCAAACTAGGAGATAATGCT 58.432 34.615 0.00 0.00 0.00 3.79
3935 4364 7.792374 TCACATTCAAACTAGGAGATAATGC 57.208 36.000 0.00 0.00 0.00 3.56
3937 4366 8.552296 ACCTTCACATTCAAACTAGGAGATAAT 58.448 33.333 0.00 0.00 0.00 1.28
3939 4368 7.038302 ACACCTTCACATTCAAACTAGGAGATA 60.038 37.037 0.00 0.00 0.00 1.98
3951 4380 2.174639 ACTCCCAACACCTTCACATTCA 59.825 45.455 0.00 0.00 0.00 2.57
3965 4394 1.300620 CTCACGCGACAACTCCCAA 60.301 57.895 15.93 0.00 0.00 4.12
3967 4396 3.112709 GCTCACGCGACAACTCCC 61.113 66.667 15.93 0.00 0.00 4.30
3989 4418 1.803519 CTTCGCTCACACGCCTCTC 60.804 63.158 0.00 0.00 0.00 3.20
3990 4419 2.259818 CTTCGCTCACACGCCTCT 59.740 61.111 0.00 0.00 0.00 3.69
4004 4433 1.345176 CGATGAGAAACGCGGCTTC 59.655 57.895 12.47 13.13 0.00 3.86
4011 4440 1.428448 TGCACTTCCGATGAGAAACG 58.572 50.000 0.00 0.00 0.00 3.60
4024 4453 1.660560 GGCCATCAAGCGATGCACTT 61.661 55.000 0.00 0.00 46.59 3.16
4026 4455 2.410469 GGCCATCAAGCGATGCAC 59.590 61.111 0.00 0.00 46.59 4.57
4027 4456 3.204119 CGGCCATCAAGCGATGCA 61.204 61.111 2.24 0.00 46.59 3.96
4028 4457 4.619140 GCGGCCATCAAGCGATGC 62.619 66.667 2.24 0.00 46.59 3.91
4075 4505 4.946478 ATATGAGAGAGGGAAGGAAACG 57.054 45.455 0.00 0.00 0.00 3.60
4100 4530 1.125093 TTTGGAAGGCACCCGAGAGA 61.125 55.000 0.00 0.00 0.00 3.10
4143 4573 4.097892 CGGAAATCAATAGTTCCCTTTGGG 59.902 45.833 0.00 0.00 45.18 4.12
4144 4574 4.947388 TCGGAAATCAATAGTTCCCTTTGG 59.053 41.667 0.00 0.00 45.18 3.28
4145 4575 5.163652 GGTCGGAAATCAATAGTTCCCTTTG 60.164 44.000 0.00 0.00 45.18 2.77
4149 4579 3.626217 GTGGTCGGAAATCAATAGTTCCC 59.374 47.826 0.00 0.00 45.18 3.97
4151 4581 4.693566 TGTGTGGTCGGAAATCAATAGTTC 59.306 41.667 0.00 0.00 0.00 3.01
4152 4582 4.454504 GTGTGTGGTCGGAAATCAATAGTT 59.545 41.667 0.00 0.00 0.00 2.24
4156 4664 3.074412 GAGTGTGTGGTCGGAAATCAAT 58.926 45.455 0.00 0.00 0.00 2.57
4165 4673 2.030562 GGGGTGAGTGTGTGGTCG 59.969 66.667 0.00 0.00 0.00 4.79
4167 4675 3.120086 GCTGGGGTGAGTGTGTGGT 62.120 63.158 0.00 0.00 0.00 4.16
4170 4678 3.941188 CGGCTGGGGTGAGTGTGT 61.941 66.667 0.00 0.00 0.00 3.72
4191 4699 0.321564 CCAAGTCGTCCATGCTTCCA 60.322 55.000 0.00 0.00 0.00 3.53
4193 4701 0.036388 TCCCAAGTCGTCCATGCTTC 60.036 55.000 0.00 0.00 0.00 3.86
4196 4704 2.100631 CGTCCCAAGTCGTCCATGC 61.101 63.158 0.00 0.00 0.00 4.06
4220 4728 1.452108 CCCGGAAGATGGCCTCAAC 60.452 63.158 0.73 0.00 0.00 3.18
4228 4736 0.181114 TCTTGATGCCCCGGAAGATG 59.819 55.000 0.73 0.00 0.00 2.90
4238 4746 1.474077 GACATTGTGGGTCTTGATGCC 59.526 52.381 0.00 0.00 32.54 4.40
4243 4751 1.531149 GTGACGACATTGTGGGTCTTG 59.469 52.381 14.95 0.00 33.11 3.02
4244 4752 1.542547 GGTGACGACATTGTGGGTCTT 60.543 52.381 14.95 0.00 33.11 3.01
4290 4798 4.794439 TGTCGCGCTCGTCCCATG 62.794 66.667 5.56 0.00 36.96 3.66
4293 4801 4.719369 ACTTGTCGCGCTCGTCCC 62.719 66.667 5.56 0.00 36.96 4.46
4297 4805 2.507102 ATGGACTTGTCGCGCTCG 60.507 61.111 5.56 0.00 0.00 5.03
4303 4811 0.460284 CCCCGAAGATGGACTTGTCG 60.460 60.000 0.00 0.00 39.13 4.35
4379 4887 2.436646 CACGACCAGGACCATGGC 60.437 66.667 13.04 4.47 44.80 4.40
4380 4888 2.268920 CCACGACCAGGACCATGG 59.731 66.667 11.19 11.19 46.47 3.66
4382 4890 2.592993 CCACCACGACCAGGACCAT 61.593 63.158 0.00 0.00 0.00 3.55
4392 4900 2.129146 AACTCCACGACCACCACGA 61.129 57.895 0.00 0.00 34.70 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.