Multiple sequence alignment - TraesCS7D01G362100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G362100 chr7D 100.000 4065 0 0 1 4065 465168563 465164499 0.000000e+00 7507.0
1 TraesCS7D01G362100 chr7D 81.027 448 67 13 1357 1801 531195571 531195139 1.400000e-89 340.0
2 TraesCS7D01G362100 chr7B 91.347 1745 100 24 420 2141 489830411 489828695 0.000000e+00 2338.0
3 TraesCS7D01G362100 chr7B 89.451 1640 119 27 2321 3921 489827967 489826343 0.000000e+00 2021.0
4 TraesCS7D01G362100 chr7B 80.000 335 30 17 3 301 191893061 191892728 3.180000e-51 213.0
5 TraesCS7D01G362100 chr7B 77.650 349 47 17 3 321 603264519 603264172 2.500000e-42 183.0
6 TraesCS7D01G362100 chr7B 95.775 71 3 0 366 436 489831398 489831328 9.230000e-22 115.0
7 TraesCS7D01G362100 chr7B 97.222 36 1 0 470 505 743819676 743819711 1.220000e-05 62.1
8 TraesCS7D01G362100 chr7B 97.222 36 1 0 470 505 744255837 744255802 1.220000e-05 62.1
9 TraesCS7D01G362100 chr7A 90.051 1749 113 26 430 2141 534443214 534444938 0.000000e+00 2209.0
10 TraesCS7D01G362100 chr7A 89.369 1759 152 25 2321 4065 534445523 534447260 0.000000e+00 2180.0
11 TraesCS7D01G362100 chr7A 88.363 739 67 11 2422 3149 79780768 79781498 0.000000e+00 870.0
12 TraesCS7D01G362100 chr7A 86.677 668 58 14 2570 3214 79813204 79813863 0.000000e+00 712.0
13 TraesCS7D01G362100 chr7A 90.969 454 32 8 1555 2002 79776736 79777186 1.620000e-168 603.0
14 TraesCS7D01G362100 chr7A 87.531 409 42 7 1604 2008 79811852 79812255 7.960000e-127 464.0
15 TraesCS7D01G362100 chr7A 79.796 490 78 11 1357 1840 611560713 611560239 1.810000e-88 337.0
16 TraesCS7D01G362100 chr7A 83.158 190 30 2 3354 3541 79784345 79784534 5.400000e-39 172.0
17 TraesCS7D01G362100 chr7A 91.489 47 3 1 362 407 534443170 534443216 3.390000e-06 63.9
18 TraesCS7D01G362100 chr7A 92.500 40 3 0 932 971 79776399 79776438 1.580000e-04 58.4
19 TraesCS7D01G362100 chr3B 81.765 340 31 19 1 316 804316347 804316679 5.210000e-64 255.0
20 TraesCS7D01G362100 chr6D 80.793 328 37 12 3 305 80003417 80003743 2.440000e-57 233.0
21 TraesCS7D01G362100 chr6D 80.000 350 33 16 3 316 424671698 424672046 1.470000e-54 224.0
22 TraesCS7D01G362100 chr1D 80.000 340 40 17 3 316 389423173 389422836 4.090000e-55 226.0
23 TraesCS7D01G362100 chr1D 80.183 328 38 13 3 305 50712191 50712516 1.900000e-53 220.0
24 TraesCS7D01G362100 chr3D 79.882 338 42 18 3 316 16320006 16319671 1.470000e-54 224.0
25 TraesCS7D01G362100 chr3D 79.343 213 18 15 128 316 15096970 15097180 4.270000e-25 126.0
26 TraesCS7D01G362100 chrUn 79.887 353 32 19 1 316 263185793 263186143 5.290000e-54 222.0
27 TraesCS7D01G362100 chr5B 79.666 359 33 19 3 321 692127905 692128263 5.290000e-54 222.0
28 TraesCS7D01G362100 chr5B 88.202 178 20 1 3 179 625089518 625089341 1.140000e-50 211.0
29 TraesCS7D01G362100 chr5B 87.079 178 22 1 3 179 628669128 628668951 2.480000e-47 200.0
30 TraesCS7D01G362100 chr3A 79.412 340 41 15 3 316 21294581 21294245 3.180000e-51 213.0
31 TraesCS7D01G362100 chr6B 79.437 355 30 22 3 316 7959336 7959688 1.140000e-50 211.0
32 TraesCS7D01G362100 chr6B 89.000 100 4 6 218 316 148330091 148329998 2.570000e-22 117.0
33 TraesCS7D01G362100 chr5A 87.356 174 21 1 3 175 622219929 622219756 8.910000e-47 198.0
34 TraesCS7D01G362100 chr4D 78.287 327 40 19 21 321 65171451 65171772 8.980000e-42 182.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G362100 chr7D 465164499 465168563 4064 True 7507.000000 7507 100.0000 1 4065 1 chr7D.!!$R1 4064
1 TraesCS7D01G362100 chr7B 489826343 489831398 5055 True 1491.333333 2338 92.1910 366 3921 3 chr7B.!!$R4 3555
2 TraesCS7D01G362100 chr7A 534443170 534447260 4090 False 1484.300000 2209 90.3030 362 4065 3 chr7A.!!$F3 3703
3 TraesCS7D01G362100 chr7A 79811852 79813863 2011 False 588.000000 712 87.1040 1604 3214 2 chr7A.!!$F2 1610
4 TraesCS7D01G362100 chr7A 79776399 79784534 8135 False 425.850000 870 88.7475 932 3541 4 chr7A.!!$F1 2609

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
112 113 0.035343 AGACCGATGACCTCGTCAGA 60.035 55.0 0.55 0.0 46.04 3.27 F
1047 2052 0.108424 CCTGCCGTCCTCTCTTCAAG 60.108 60.0 0.00 0.0 0.00 3.02 F
1249 2274 0.035439 CCCACCTACACCAATTCGCT 60.035 55.0 0.00 0.0 0.00 4.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1097 2102 1.069204 AGCAAGACGAAGAAGCAGACA 59.931 47.619 0.0 0.0 0.00 3.41 R
2595 7698 0.478507 ACCCTCAAAGAACTGGTGGG 59.521 55.000 0.0 0.0 36.89 4.61 R
3192 8336 0.106819 GCCCAGCACCATGAGAAGAT 60.107 55.000 0.0 0.0 0.00 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.266055 GAAGCCCGAGGACACAGG 59.734 66.667 0.00 0.00 0.00 4.00
18 19 2.526873 AAGCCCGAGGACACAGGT 60.527 61.111 0.00 0.00 0.00 4.00
19 20 2.508586 GAAGCCCGAGGACACAGGTC 62.509 65.000 0.00 0.00 43.55 3.85
28 29 3.540211 GACACAGGTCCACCATGAG 57.460 57.895 0.00 0.75 38.12 2.90
29 30 0.036010 GACACAGGTCCACCATGAGG 60.036 60.000 0.00 0.00 38.12 3.86
30 31 0.473694 ACACAGGTCCACCATGAGGA 60.474 55.000 0.00 0.00 38.89 3.71
31 32 0.914644 CACAGGTCCACCATGAGGAT 59.085 55.000 9.64 0.00 37.52 3.24
32 33 0.914644 ACAGGTCCACCATGAGGATG 59.085 55.000 9.64 7.81 37.52 3.51
33 34 0.465097 CAGGTCCACCATGAGGATGC 60.465 60.000 9.64 0.00 37.52 3.91
34 35 1.152881 GGTCCACCATGAGGATGCC 60.153 63.158 9.64 4.60 37.52 4.40
35 36 1.524621 GTCCACCATGAGGATGCCG 60.525 63.158 9.64 0.00 37.52 5.69
36 37 2.903855 CCACCATGAGGATGCCGC 60.904 66.667 0.00 0.00 38.69 6.53
37 38 2.903855 CACCATGAGGATGCCGCC 60.904 66.667 0.00 0.00 38.69 6.13
38 39 4.195334 ACCATGAGGATGCCGCCC 62.195 66.667 0.00 0.00 38.69 6.13
39 40 4.962836 CCATGAGGATGCCGCCCC 62.963 72.222 0.00 0.00 36.89 5.80
40 41 4.193893 CATGAGGATGCCGCCCCA 62.194 66.667 0.00 0.00 0.00 4.96
41 42 4.195334 ATGAGGATGCCGCCCCAC 62.195 66.667 2.27 0.00 0.00 4.61
52 53 4.740822 GCCCCACCGCACCATTCT 62.741 66.667 0.00 0.00 0.00 2.40
53 54 2.035626 CCCCACCGCACCATTCTT 59.964 61.111 0.00 0.00 0.00 2.52
54 55 2.046285 CCCCACCGCACCATTCTTC 61.046 63.158 0.00 0.00 0.00 2.87
55 56 2.046285 CCCACCGCACCATTCTTCC 61.046 63.158 0.00 0.00 0.00 3.46
56 57 1.002134 CCACCGCACCATTCTTCCT 60.002 57.895 0.00 0.00 0.00 3.36
57 58 0.609131 CCACCGCACCATTCTTCCTT 60.609 55.000 0.00 0.00 0.00 3.36
58 59 0.523072 CACCGCACCATTCTTCCTTG 59.477 55.000 0.00 0.00 0.00 3.61
59 60 0.400213 ACCGCACCATTCTTCCTTGA 59.600 50.000 0.00 0.00 0.00 3.02
60 61 1.202879 ACCGCACCATTCTTCCTTGAA 60.203 47.619 0.00 0.00 0.00 2.69
61 62 1.200020 CCGCACCATTCTTCCTTGAAC 59.800 52.381 0.00 0.00 0.00 3.18
62 63 1.879380 CGCACCATTCTTCCTTGAACA 59.121 47.619 0.00 0.00 0.00 3.18
63 64 2.293122 CGCACCATTCTTCCTTGAACAA 59.707 45.455 0.00 0.00 0.00 2.83
64 65 3.243367 CGCACCATTCTTCCTTGAACAAA 60.243 43.478 0.00 0.00 0.00 2.83
65 66 4.051237 GCACCATTCTTCCTTGAACAAAC 58.949 43.478 0.00 0.00 0.00 2.93
66 67 4.202151 GCACCATTCTTCCTTGAACAAACT 60.202 41.667 0.00 0.00 0.00 2.66
67 68 5.009610 GCACCATTCTTCCTTGAACAAACTA 59.990 40.000 0.00 0.00 0.00 2.24
68 69 6.672147 CACCATTCTTCCTTGAACAAACTAG 58.328 40.000 0.00 0.00 0.00 2.57
69 70 6.263168 CACCATTCTTCCTTGAACAAACTAGT 59.737 38.462 0.00 0.00 0.00 2.57
70 71 6.833933 ACCATTCTTCCTTGAACAAACTAGTT 59.166 34.615 1.12 1.12 0.00 2.24
71 72 7.013369 ACCATTCTTCCTTGAACAAACTAGTTC 59.987 37.037 8.95 0.00 46.22 3.01
72 73 6.937436 TTCTTCCTTGAACAAACTAGTTCC 57.063 37.500 8.95 0.00 45.62 3.62
73 74 6.248569 TCTTCCTTGAACAAACTAGTTCCT 57.751 37.500 8.95 0.00 45.62 3.36
74 75 7.369551 TCTTCCTTGAACAAACTAGTTCCTA 57.630 36.000 8.95 0.00 45.62 2.94
75 76 7.798071 TCTTCCTTGAACAAACTAGTTCCTAA 58.202 34.615 8.95 0.31 45.62 2.69
76 77 8.269317 TCTTCCTTGAACAAACTAGTTCCTAAA 58.731 33.333 8.95 0.16 45.62 1.85
77 78 8.990163 TTCCTTGAACAAACTAGTTCCTAAAT 57.010 30.769 8.95 0.00 45.62 1.40
78 79 8.617290 TCCTTGAACAAACTAGTTCCTAAATC 57.383 34.615 8.95 3.20 45.62 2.17
79 80 7.664318 TCCTTGAACAAACTAGTTCCTAAATCC 59.336 37.037 8.95 0.00 45.62 3.01
80 81 7.447238 CCTTGAACAAACTAGTTCCTAAATCCA 59.553 37.037 8.95 0.00 45.62 3.41
81 82 8.934023 TTGAACAAACTAGTTCCTAAATCCAT 57.066 30.769 8.95 0.00 45.62 3.41
82 83 8.561738 TGAACAAACTAGTTCCTAAATCCATC 57.438 34.615 8.95 0.00 45.62 3.51
83 84 7.610305 TGAACAAACTAGTTCCTAAATCCATCC 59.390 37.037 8.95 0.00 45.62 3.51
84 85 6.424032 ACAAACTAGTTCCTAAATCCATCCC 58.576 40.000 8.95 0.00 0.00 3.85
85 86 5.648330 AACTAGTTCCTAAATCCATCCCC 57.352 43.478 1.12 0.00 0.00 4.81
86 87 4.641868 ACTAGTTCCTAAATCCATCCCCA 58.358 43.478 0.00 0.00 0.00 4.96
87 88 5.043762 ACTAGTTCCTAAATCCATCCCCAA 58.956 41.667 0.00 0.00 0.00 4.12
88 89 4.251103 AGTTCCTAAATCCATCCCCAAC 57.749 45.455 0.00 0.00 0.00 3.77
89 90 3.052869 AGTTCCTAAATCCATCCCCAACC 60.053 47.826 0.00 0.00 0.00 3.77
90 91 2.579100 TCCTAAATCCATCCCCAACCA 58.421 47.619 0.00 0.00 0.00 3.67
91 92 3.138518 TCCTAAATCCATCCCCAACCAT 58.861 45.455 0.00 0.00 0.00 3.55
92 93 4.320398 TCCTAAATCCATCCCCAACCATA 58.680 43.478 0.00 0.00 0.00 2.74
93 94 4.734503 TCCTAAATCCATCCCCAACCATAA 59.265 41.667 0.00 0.00 0.00 1.90
94 95 5.079643 CCTAAATCCATCCCCAACCATAAG 58.920 45.833 0.00 0.00 0.00 1.73
95 96 4.898014 AAATCCATCCCCAACCATAAGA 57.102 40.909 0.00 0.00 0.00 2.10
96 97 3.884037 ATCCATCCCCAACCATAAGAC 57.116 47.619 0.00 0.00 0.00 3.01
97 98 1.850345 TCCATCCCCAACCATAAGACC 59.150 52.381 0.00 0.00 0.00 3.85
98 99 1.476833 CCATCCCCAACCATAAGACCG 60.477 57.143 0.00 0.00 0.00 4.79
99 100 1.488812 CATCCCCAACCATAAGACCGA 59.511 52.381 0.00 0.00 0.00 4.69
100 101 1.887797 TCCCCAACCATAAGACCGAT 58.112 50.000 0.00 0.00 0.00 4.18
101 102 1.488812 TCCCCAACCATAAGACCGATG 59.511 52.381 0.00 0.00 0.00 3.84
102 103 1.488812 CCCCAACCATAAGACCGATGA 59.511 52.381 0.00 0.00 0.00 2.92
103 104 2.561569 CCCAACCATAAGACCGATGAC 58.438 52.381 0.00 0.00 0.00 3.06
104 105 2.561569 CCAACCATAAGACCGATGACC 58.438 52.381 0.00 0.00 0.00 4.02
105 106 2.170607 CCAACCATAAGACCGATGACCT 59.829 50.000 0.00 0.00 0.00 3.85
106 107 3.458189 CAACCATAAGACCGATGACCTC 58.542 50.000 0.00 0.00 0.00 3.85
108 109 1.681793 CCATAAGACCGATGACCTCGT 59.318 52.381 0.00 0.00 46.18 4.18
109 110 2.287668 CCATAAGACCGATGACCTCGTC 60.288 54.545 0.00 0.00 46.18 4.20
110 111 2.118313 TAAGACCGATGACCTCGTCA 57.882 50.000 0.00 0.00 46.90 4.35
111 112 0.811915 AAGACCGATGACCTCGTCAG 59.188 55.000 0.55 0.00 46.04 3.51
112 113 0.035343 AGACCGATGACCTCGTCAGA 60.035 55.000 0.55 0.00 46.04 3.27
113 114 0.809385 GACCGATGACCTCGTCAGAA 59.191 55.000 0.55 0.00 46.04 3.02
114 115 1.201647 GACCGATGACCTCGTCAGAAA 59.798 52.381 0.55 0.00 46.04 2.52
115 116 1.616865 ACCGATGACCTCGTCAGAAAA 59.383 47.619 0.55 0.00 46.04 2.29
116 117 2.263077 CCGATGACCTCGTCAGAAAAG 58.737 52.381 0.55 0.00 46.04 2.27
117 118 2.352814 CCGATGACCTCGTCAGAAAAGT 60.353 50.000 0.55 0.00 46.04 2.66
118 119 3.119602 CCGATGACCTCGTCAGAAAAGTA 60.120 47.826 0.55 0.00 46.04 2.24
119 120 4.440250 CCGATGACCTCGTCAGAAAAGTAT 60.440 45.833 0.55 0.00 46.04 2.12
120 121 4.735822 CGATGACCTCGTCAGAAAAGTATC 59.264 45.833 0.55 0.00 46.04 2.24
121 122 4.451629 TGACCTCGTCAGAAAAGTATCC 57.548 45.455 0.00 0.00 37.67 2.59
122 123 3.119602 TGACCTCGTCAGAAAAGTATCCG 60.120 47.826 0.00 0.00 37.67 4.18
123 124 3.087031 ACCTCGTCAGAAAAGTATCCGA 58.913 45.455 0.00 0.00 0.00 4.55
124 125 3.508793 ACCTCGTCAGAAAAGTATCCGAA 59.491 43.478 0.00 0.00 0.00 4.30
125 126 4.021719 ACCTCGTCAGAAAAGTATCCGAAA 60.022 41.667 0.00 0.00 0.00 3.46
126 127 4.927425 CCTCGTCAGAAAAGTATCCGAAAA 59.073 41.667 0.00 0.00 0.00 2.29
127 128 5.407387 CCTCGTCAGAAAAGTATCCGAAAAA 59.593 40.000 0.00 0.00 0.00 1.94
128 129 6.092259 CCTCGTCAGAAAAGTATCCGAAAAAT 59.908 38.462 0.00 0.00 0.00 1.82
129 130 7.057149 TCGTCAGAAAAGTATCCGAAAAATC 57.943 36.000 0.00 0.00 0.00 2.17
130 131 6.872020 TCGTCAGAAAAGTATCCGAAAAATCT 59.128 34.615 0.00 0.00 0.00 2.40
131 132 7.386848 TCGTCAGAAAAGTATCCGAAAAATCTT 59.613 33.333 0.00 0.00 0.00 2.40
132 133 8.015658 CGTCAGAAAAGTATCCGAAAAATCTTT 58.984 33.333 0.00 0.00 0.00 2.52
140 141 9.769093 AAGTATCCGAAAAATCTTTATTCAACG 57.231 29.630 0.00 0.00 0.00 4.10
141 142 8.943002 AGTATCCGAAAAATCTTTATTCAACGT 58.057 29.630 0.00 0.00 0.00 3.99
142 143 9.207042 GTATCCGAAAAATCTTTATTCAACGTC 57.793 33.333 0.00 0.00 0.00 4.34
143 144 6.301108 TCCGAAAAATCTTTATTCAACGTCG 58.699 36.000 0.00 0.00 0.00 5.12
144 145 6.073657 TCCGAAAAATCTTTATTCAACGTCGT 60.074 34.615 0.00 0.00 0.00 4.34
145 146 6.245710 CCGAAAAATCTTTATTCAACGTCGTC 59.754 38.462 0.00 0.00 0.00 4.20
146 147 6.788458 CGAAAAATCTTTATTCAACGTCGTCA 59.212 34.615 0.00 0.00 0.00 4.35
147 148 7.477422 CGAAAAATCTTTATTCAACGTCGTCAT 59.523 33.333 0.00 0.00 0.00 3.06
148 149 8.655378 AAAAATCTTTATTCAACGTCGTCATC 57.345 30.769 0.00 0.00 0.00 2.92
149 150 5.621635 ATCTTTATTCAACGTCGTCATCG 57.378 39.130 0.00 0.00 38.55 3.84
150 151 4.478699 TCTTTATTCAACGTCGTCATCGT 58.521 39.130 0.00 0.00 43.45 3.73
151 152 4.556135 TCTTTATTCAACGTCGTCATCGTC 59.444 41.667 0.00 0.00 40.69 4.20
156 157 3.295462 CGTCGTCATCGTCGTCGC 61.295 66.667 0.00 0.00 41.73 5.19
157 158 2.943034 GTCGTCATCGTCGTCGCC 60.943 66.667 0.00 0.00 38.33 5.54
158 159 4.509883 TCGTCATCGTCGTCGCCG 62.510 66.667 0.00 0.00 38.33 6.46
159 160 4.509883 CGTCATCGTCGTCGCCGA 62.510 66.667 0.00 0.00 41.73 5.54
160 161 2.202388 GTCATCGTCGTCGCCGAA 60.202 61.111 1.28 0.00 46.26 4.30
161 162 2.099638 TCATCGTCGTCGCCGAAG 59.900 61.111 1.28 0.00 46.26 3.79
162 163 3.607987 CATCGTCGTCGCCGAAGC 61.608 66.667 1.28 0.00 46.26 3.86
163 164 4.849329 ATCGTCGTCGCCGAAGCC 62.849 66.667 1.28 0.00 46.26 4.35
166 167 3.479269 GTCGTCGCCGAAGCCAAG 61.479 66.667 0.00 0.00 46.26 3.61
167 168 3.676605 TCGTCGCCGAAGCCAAGA 61.677 61.111 0.00 0.00 40.86 3.02
168 169 3.479269 CGTCGCCGAAGCCAAGAC 61.479 66.667 0.00 0.00 35.63 3.01
169 170 3.479269 GTCGCCGAAGCCAAGACG 61.479 66.667 0.00 0.00 34.57 4.18
170 171 3.676605 TCGCCGAAGCCAAGACGA 61.677 61.111 0.00 0.00 34.57 4.20
171 172 2.509336 CGCCGAAGCCAAGACGAT 60.509 61.111 0.00 0.00 34.57 3.73
172 173 1.226859 CGCCGAAGCCAAGACGATA 60.227 57.895 0.00 0.00 34.57 2.92
173 174 0.804544 CGCCGAAGCCAAGACGATAA 60.805 55.000 0.00 0.00 34.57 1.75
174 175 1.365699 GCCGAAGCCAAGACGATAAA 58.634 50.000 0.00 0.00 0.00 1.40
175 176 1.940613 GCCGAAGCCAAGACGATAAAT 59.059 47.619 0.00 0.00 0.00 1.40
176 177 3.128349 GCCGAAGCCAAGACGATAAATA 58.872 45.455 0.00 0.00 0.00 1.40
177 178 3.558418 GCCGAAGCCAAGACGATAAATAA 59.442 43.478 0.00 0.00 0.00 1.40
178 179 4.552184 GCCGAAGCCAAGACGATAAATAAC 60.552 45.833 0.00 0.00 0.00 1.89
179 180 4.569162 CCGAAGCCAAGACGATAAATAACA 59.431 41.667 0.00 0.00 0.00 2.41
180 181 5.064198 CCGAAGCCAAGACGATAAATAACAA 59.936 40.000 0.00 0.00 0.00 2.83
181 182 6.185399 CGAAGCCAAGACGATAAATAACAAG 58.815 40.000 0.00 0.00 0.00 3.16
182 183 6.436843 AAGCCAAGACGATAAATAACAAGG 57.563 37.500 0.00 0.00 0.00 3.61
183 184 4.881850 AGCCAAGACGATAAATAACAAGGG 59.118 41.667 0.00 0.00 0.00 3.95
184 185 4.879545 GCCAAGACGATAAATAACAAGGGA 59.120 41.667 0.00 0.00 0.00 4.20
185 186 5.007724 GCCAAGACGATAAATAACAAGGGAG 59.992 44.000 0.00 0.00 0.00 4.30
186 187 6.113411 CCAAGACGATAAATAACAAGGGAGT 58.887 40.000 0.00 0.00 0.00 3.85
187 188 7.270047 CCAAGACGATAAATAACAAGGGAGTA 58.730 38.462 0.00 0.00 0.00 2.59
188 189 7.767198 CCAAGACGATAAATAACAAGGGAGTAA 59.233 37.037 0.00 0.00 0.00 2.24
189 190 9.158233 CAAGACGATAAATAACAAGGGAGTAAA 57.842 33.333 0.00 0.00 0.00 2.01
190 191 9.729281 AAGACGATAAATAACAAGGGAGTAAAA 57.271 29.630 0.00 0.00 0.00 1.52
191 192 9.901172 AGACGATAAATAACAAGGGAGTAAAAT 57.099 29.630 0.00 0.00 0.00 1.82
193 194 8.823818 ACGATAAATAACAAGGGAGTAAAATCG 58.176 33.333 0.00 0.00 36.84 3.34
194 195 9.037737 CGATAAATAACAAGGGAGTAAAATCGA 57.962 33.333 0.00 0.00 33.69 3.59
197 198 7.803279 AATAACAAGGGAGTAAAATCGATCC 57.197 36.000 0.00 0.00 0.00 3.36
198 199 4.837093 ACAAGGGAGTAAAATCGATCCA 57.163 40.909 0.00 0.00 33.24 3.41
199 200 4.514401 ACAAGGGAGTAAAATCGATCCAC 58.486 43.478 0.00 0.00 33.24 4.02
200 201 4.019681 ACAAGGGAGTAAAATCGATCCACA 60.020 41.667 0.00 0.00 33.24 4.17
201 202 5.126067 CAAGGGAGTAAAATCGATCCACAT 58.874 41.667 0.00 0.00 33.24 3.21
202 203 4.708177 AGGGAGTAAAATCGATCCACATG 58.292 43.478 0.00 0.00 33.24 3.21
203 204 4.164221 AGGGAGTAAAATCGATCCACATGT 59.836 41.667 0.00 0.00 33.24 3.21
204 205 4.273480 GGGAGTAAAATCGATCCACATGTG 59.727 45.833 19.31 19.31 33.24 3.21
228 229 2.044650 CCCCCTCACTACCGACGA 60.045 66.667 0.00 0.00 0.00 4.20
229 230 2.413142 CCCCCTCACTACCGACGAC 61.413 68.421 0.00 0.00 0.00 4.34
230 231 2.413142 CCCCTCACTACCGACGACC 61.413 68.421 0.00 0.00 0.00 4.79
231 232 2.758089 CCCTCACTACCGACGACCG 61.758 68.421 0.00 0.00 38.18 4.79
232 233 1.742880 CCTCACTACCGACGACCGA 60.743 63.158 0.00 0.00 41.76 4.69
233 234 1.703438 CCTCACTACCGACGACCGAG 61.703 65.000 0.00 0.00 41.76 4.63
234 235 1.703438 CTCACTACCGACGACCGAGG 61.703 65.000 0.00 1.98 41.76 4.63
235 236 2.037136 CACTACCGACGACCGAGGT 61.037 63.158 15.33 15.33 41.76 3.85
236 237 1.743252 ACTACCGACGACCGAGGTC 60.743 63.158 12.07 12.07 41.76 3.85
260 261 3.077556 GGAGGAGAGCCGCTGGAA 61.078 66.667 0.00 0.00 39.96 3.53
261 262 2.498726 GAGGAGAGCCGCTGGAAG 59.501 66.667 0.00 0.00 39.96 3.46
262 263 2.038007 AGGAGAGCCGCTGGAAGA 59.962 61.111 0.00 0.00 39.96 2.87
263 264 1.382420 AGGAGAGCCGCTGGAAGAT 60.382 57.895 0.00 0.00 39.96 2.40
264 265 0.980231 AGGAGAGCCGCTGGAAGATT 60.980 55.000 0.00 0.00 39.96 2.40
265 266 0.813210 GGAGAGCCGCTGGAAGATTG 60.813 60.000 0.00 0.00 34.07 2.67
266 267 0.813210 GAGAGCCGCTGGAAGATTGG 60.813 60.000 0.00 0.00 34.07 3.16
267 268 1.078143 GAGCCGCTGGAAGATTGGT 60.078 57.895 0.00 0.00 34.07 3.67
268 269 1.078143 AGCCGCTGGAAGATTGGTC 60.078 57.895 0.00 0.00 34.07 4.02
269 270 1.078143 GCCGCTGGAAGATTGGTCT 60.078 57.895 0.00 0.00 34.07 3.85
270 271 1.092345 GCCGCTGGAAGATTGGTCTC 61.092 60.000 0.00 0.00 34.07 3.36
271 272 0.539051 CCGCTGGAAGATTGGTCTCT 59.461 55.000 0.00 0.00 34.07 3.10
272 273 1.472376 CCGCTGGAAGATTGGTCTCTC 60.472 57.143 0.00 0.00 34.07 3.20
273 274 1.472376 CGCTGGAAGATTGGTCTCTCC 60.472 57.143 0.00 0.00 34.07 3.71
274 275 1.836802 GCTGGAAGATTGGTCTCTCCT 59.163 52.381 0.00 0.00 34.97 3.69
275 276 2.419851 GCTGGAAGATTGGTCTCTCCTG 60.420 54.545 0.00 0.00 34.97 3.86
276 277 2.170187 CTGGAAGATTGGTCTCTCCTGG 59.830 54.545 0.00 0.00 34.97 4.45
277 278 1.134250 GGAAGATTGGTCTCTCCTGGC 60.134 57.143 0.00 0.00 37.07 4.85
278 279 0.539051 AAGATTGGTCTCTCCTGGCG 59.461 55.000 0.00 0.00 37.07 5.69
279 280 1.144936 GATTGGTCTCTCCTGGCGG 59.855 63.158 0.00 0.00 37.07 6.13
280 281 2.932130 GATTGGTCTCTCCTGGCGGC 62.932 65.000 0.00 0.00 37.07 6.53
294 295 4.530857 CGGCGGCTAGGGTTCCAG 62.531 72.222 7.61 0.00 0.00 3.86
295 296 4.858680 GGCGGCTAGGGTTCCAGC 62.859 72.222 0.00 0.00 37.05 4.85
299 300 4.858680 GCTAGGGTTCCAGCCGCC 62.859 72.222 0.00 0.00 41.56 6.13
300 301 3.399181 CTAGGGTTCCAGCCGCCA 61.399 66.667 0.00 0.00 41.56 5.69
301 302 3.682292 CTAGGGTTCCAGCCGCCAC 62.682 68.421 0.00 0.00 41.56 5.01
323 324 3.696782 CGAGAGTGAAACGATCGGT 57.303 52.632 20.98 10.86 45.86 4.69
324 325 1.978542 CGAGAGTGAAACGATCGGTT 58.021 50.000 20.24 20.24 45.86 4.44
325 326 1.649171 CGAGAGTGAAACGATCGGTTG 59.351 52.381 25.51 2.55 45.86 3.77
326 327 2.667448 CGAGAGTGAAACGATCGGTTGA 60.667 50.000 25.51 13.20 45.86 3.18
327 328 3.512680 GAGAGTGAAACGATCGGTTGAT 58.487 45.455 25.51 8.55 45.86 2.57
328 329 4.669318 GAGAGTGAAACGATCGGTTGATA 58.331 43.478 25.51 6.56 45.86 2.15
329 330 4.673441 AGAGTGAAACGATCGGTTGATAG 58.327 43.478 25.51 0.00 45.86 2.08
330 331 3.782046 AGTGAAACGATCGGTTGATAGG 58.218 45.455 25.51 0.00 45.86 2.57
331 332 3.194968 AGTGAAACGATCGGTTGATAGGT 59.805 43.478 25.51 0.00 45.86 3.08
332 333 3.930848 GTGAAACGATCGGTTGATAGGTT 59.069 43.478 25.51 0.00 39.47 3.50
333 334 5.104374 GTGAAACGATCGGTTGATAGGTTA 58.896 41.667 25.51 0.00 37.28 2.85
334 335 5.231568 GTGAAACGATCGGTTGATAGGTTAG 59.768 44.000 25.51 0.00 37.28 2.34
335 336 5.125900 TGAAACGATCGGTTGATAGGTTAGA 59.874 40.000 25.51 0.00 37.28 2.10
336 337 5.587388 AACGATCGGTTGATAGGTTAGAA 57.413 39.130 20.98 0.00 37.50 2.10
337 338 4.929781 ACGATCGGTTGATAGGTTAGAAC 58.070 43.478 20.98 0.00 34.09 3.01
338 339 4.643784 ACGATCGGTTGATAGGTTAGAACT 59.356 41.667 20.98 0.00 34.09 3.01
339 340 4.976731 CGATCGGTTGATAGGTTAGAACTG 59.023 45.833 7.38 0.00 34.09 3.16
340 341 4.730949 TCGGTTGATAGGTTAGAACTGG 57.269 45.455 0.00 0.00 0.00 4.00
341 342 3.449737 TCGGTTGATAGGTTAGAACTGGG 59.550 47.826 0.00 0.00 0.00 4.45
342 343 3.449737 CGGTTGATAGGTTAGAACTGGGA 59.550 47.826 0.00 0.00 0.00 4.37
343 344 4.081309 CGGTTGATAGGTTAGAACTGGGAA 60.081 45.833 0.00 0.00 0.00 3.97
344 345 5.396436 CGGTTGATAGGTTAGAACTGGGAAT 60.396 44.000 0.00 0.00 0.00 3.01
345 346 6.424032 GGTTGATAGGTTAGAACTGGGAATT 58.576 40.000 0.00 0.00 0.00 2.17
346 347 6.542735 GGTTGATAGGTTAGAACTGGGAATTC 59.457 42.308 0.00 0.00 0.00 2.17
347 348 6.248569 TGATAGGTTAGAACTGGGAATTCC 57.751 41.667 16.74 16.74 0.00 3.01
348 349 5.970640 TGATAGGTTAGAACTGGGAATTCCT 59.029 40.000 23.63 3.87 36.20 3.36
349 350 4.576330 AGGTTAGAACTGGGAATTCCTG 57.424 45.455 23.63 18.04 39.98 3.86
350 351 4.175962 AGGTTAGAACTGGGAATTCCTGA 58.824 43.478 23.63 10.14 37.82 3.86
351 352 4.226168 AGGTTAGAACTGGGAATTCCTGAG 59.774 45.833 23.63 20.18 37.82 3.35
352 353 4.225267 GGTTAGAACTGGGAATTCCTGAGA 59.775 45.833 23.63 5.32 37.82 3.27
353 354 5.423886 GTTAGAACTGGGAATTCCTGAGAG 58.576 45.833 23.63 15.73 37.82 3.20
354 355 2.843113 AGAACTGGGAATTCCTGAGAGG 59.157 50.000 23.63 10.03 37.82 3.69
355 356 0.915364 ACTGGGAATTCCTGAGAGGC 59.085 55.000 23.63 6.10 37.82 4.70
356 357 1.211456 CTGGGAATTCCTGAGAGGCT 58.789 55.000 23.63 0.00 36.68 4.58
357 358 1.563410 CTGGGAATTCCTGAGAGGCTT 59.437 52.381 23.63 0.00 36.68 4.35
358 359 1.561542 TGGGAATTCCTGAGAGGCTTC 59.438 52.381 23.63 3.93 34.61 3.86
359 360 1.561542 GGGAATTCCTGAGAGGCTTCA 59.438 52.381 23.63 0.00 34.61 3.02
360 361 2.637947 GGAATTCCTGAGAGGCTTCAC 58.362 52.381 17.73 0.00 34.61 3.18
361 362 2.275318 GAATTCCTGAGAGGCTTCACG 58.725 52.381 0.00 0.00 34.61 4.35
362 363 1.270907 ATTCCTGAGAGGCTTCACGT 58.729 50.000 0.00 0.00 34.61 4.49
363 364 1.919240 TTCCTGAGAGGCTTCACGTA 58.081 50.000 0.00 0.00 34.61 3.57
364 365 2.145397 TCCTGAGAGGCTTCACGTAT 57.855 50.000 0.00 0.00 34.61 3.06
373 374 3.667360 AGGCTTCACGTATAAAAACCGT 58.333 40.909 0.00 0.00 34.71 4.83
407 408 2.915738 TTCGTCGGAAAGAGCTAGTC 57.084 50.000 0.00 0.00 0.00 2.59
408 409 0.725686 TCGTCGGAAAGAGCTAGTCG 59.274 55.000 0.00 0.00 0.00 4.18
409 410 0.725686 CGTCGGAAAGAGCTAGTCGA 59.274 55.000 0.00 0.00 0.00 4.20
410 411 1.129998 CGTCGGAAAGAGCTAGTCGAA 59.870 52.381 0.00 0.00 0.00 3.71
411 412 2.517935 GTCGGAAAGAGCTAGTCGAAC 58.482 52.381 0.00 0.00 0.00 3.95
412 413 1.129998 TCGGAAAGAGCTAGTCGAACG 59.870 52.381 0.00 0.00 0.00 3.95
413 414 1.270068 GGAAAGAGCTAGTCGAACGC 58.730 55.000 0.00 0.00 0.00 4.84
414 415 1.402456 GGAAAGAGCTAGTCGAACGCA 60.402 52.381 0.00 0.00 0.00 5.24
415 416 2.325761 GAAAGAGCTAGTCGAACGCAA 58.674 47.619 0.00 0.00 0.00 4.85
416 417 1.699343 AAGAGCTAGTCGAACGCAAC 58.301 50.000 0.00 0.00 0.00 4.17
417 418 0.454620 AGAGCTAGTCGAACGCAACG 60.455 55.000 0.00 0.00 0.00 4.10
418 419 1.999651 GAGCTAGTCGAACGCAACGC 62.000 60.000 0.00 0.00 0.00 4.84
419 420 2.369629 GCTAGTCGAACGCAACGCA 61.370 57.895 0.00 0.00 0.00 5.24
420 421 1.882682 GCTAGTCGAACGCAACGCAA 61.883 55.000 0.00 0.00 0.00 4.85
421 422 0.179282 CTAGTCGAACGCAACGCAAC 60.179 55.000 0.00 0.00 0.00 4.17
422 423 0.595567 TAGTCGAACGCAACGCAACT 60.596 50.000 0.00 0.00 0.00 3.16
423 424 1.436606 GTCGAACGCAACGCAACTC 60.437 57.895 0.00 0.00 0.00 3.01
424 425 1.590525 TCGAACGCAACGCAACTCT 60.591 52.632 0.00 0.00 0.00 3.24
425 426 1.149361 TCGAACGCAACGCAACTCTT 61.149 50.000 0.00 0.00 0.00 2.85
426 427 0.718220 CGAACGCAACGCAACTCTTC 60.718 55.000 0.00 0.00 0.00 2.87
427 428 0.384353 GAACGCAACGCAACTCTTCC 60.384 55.000 0.00 0.00 0.00 3.46
428 429 1.782028 AACGCAACGCAACTCTTCCC 61.782 55.000 0.00 0.00 0.00 3.97
464 1423 4.186856 TGTGAGATTCGTAGACAATGCA 57.813 40.909 0.00 0.00 34.32 3.96
685 1649 3.411517 CTGACCGGCCCCTTCCAT 61.412 66.667 0.00 0.00 0.00 3.41
706 1670 2.863346 CGACCCACTGACGGTTGGA 61.863 63.158 11.43 0.00 35.04 3.53
780 1745 2.842936 CCGGGGCCCGTAAGATCT 60.843 66.667 40.30 0.00 46.80 2.75
827 1794 2.989824 CGACACCCTCTCCGTGGT 60.990 66.667 0.00 0.00 35.46 4.16
1045 2050 1.984570 CCCTGCCGTCCTCTCTTCA 60.985 63.158 0.00 0.00 0.00 3.02
1046 2051 1.544825 CCCTGCCGTCCTCTCTTCAA 61.545 60.000 0.00 0.00 0.00 2.69
1047 2052 0.108424 CCTGCCGTCCTCTCTTCAAG 60.108 60.000 0.00 0.00 0.00 3.02
1048 2053 0.605589 CTGCCGTCCTCTCTTCAAGT 59.394 55.000 0.00 0.00 0.00 3.16
1049 2054 0.603569 TGCCGTCCTCTCTTCAAGTC 59.396 55.000 0.00 0.00 0.00 3.01
1050 2055 0.892063 GCCGTCCTCTCTTCAAGTCT 59.108 55.000 0.00 0.00 0.00 3.24
1051 2056 1.273886 GCCGTCCTCTCTTCAAGTCTT 59.726 52.381 0.00 0.00 0.00 3.01
1052 2057 2.672760 GCCGTCCTCTCTTCAAGTCTTC 60.673 54.545 0.00 0.00 0.00 2.87
1053 2058 2.823154 CCGTCCTCTCTTCAAGTCTTCT 59.177 50.000 0.00 0.00 0.00 2.85
1096 2101 0.729116 AGCGATGGCGTTCAGAATTG 59.271 50.000 0.00 0.00 46.35 2.32
1097 2102 0.447801 GCGATGGCGTTCAGAATTGT 59.552 50.000 0.00 0.00 40.36 2.71
1098 2103 1.791555 GCGATGGCGTTCAGAATTGTG 60.792 52.381 0.00 0.00 40.36 3.33
1099 2104 1.464608 CGATGGCGTTCAGAATTGTGT 59.535 47.619 2.11 0.00 0.00 3.72
1106 2111 3.803555 CGTTCAGAATTGTGTCTGCTTC 58.196 45.455 2.11 0.00 44.01 3.86
1109 2114 5.447573 GTTCAGAATTGTGTCTGCTTCTTC 58.552 41.667 2.11 0.00 44.01 2.87
1113 2118 2.890808 TTGTGTCTGCTTCTTCGTCT 57.109 45.000 0.00 0.00 0.00 4.18
1133 2138 2.769617 CTGCCGCGTTGTTCTACG 59.230 61.111 4.92 2.85 44.09 3.51
1159 2167 2.867429 CTGAATTGCGAGGCGAAATTT 58.133 42.857 7.16 0.00 44.00 1.82
1167 2175 3.917380 TGCGAGGCGAAATTTGTTAATTG 59.083 39.130 0.00 0.00 34.27 2.32
1249 2274 0.035439 CCCACCTACACCAATTCGCT 60.035 55.000 0.00 0.00 0.00 4.93
1276 2301 9.749340 GGTAAATATATGTGCTAATTAAGGGGT 57.251 33.333 0.00 0.00 0.00 4.95
1294 2327 7.619512 AAGGGGTTATTTGTGGTTATTTTCA 57.380 32.000 0.00 0.00 0.00 2.69
1331 2364 1.154016 CTCGTGATTCTGACGCGGT 60.154 57.895 12.47 0.00 40.81 5.68
1615 2648 3.771160 GTCATCCTCGCCACGGGT 61.771 66.667 0.00 0.00 0.00 5.28
1654 2687 2.881352 GCCGAGGAGAAGTTCGCG 60.881 66.667 0.00 0.00 35.58 5.87
2002 3041 3.707458 TACGACGCCCATGCCCAA 61.707 61.111 0.00 0.00 0.00 4.12
2074 3119 1.293924 CGTCCCAAGCTCATCATGTC 58.706 55.000 0.00 0.00 0.00 3.06
2136 6234 7.435192 CCAGTTCTTAAGGCAACAAACTTTTAG 59.565 37.037 1.85 0.00 41.41 1.85
2157 6261 9.820229 TTTTAGTTAAGTCACATCTTTTATGCG 57.180 29.630 0.00 0.00 0.00 4.73
2158 6262 8.542497 TTAGTTAAGTCACATCTTTTATGCGT 57.458 30.769 0.00 0.00 0.00 5.24
2160 6264 7.298122 AGTTAAGTCACATCTTTTATGCGTTG 58.702 34.615 0.00 0.00 0.00 4.10
2164 6268 6.913170 AGTCACATCTTTTATGCGTTGAATT 58.087 32.000 0.00 0.00 0.00 2.17
2179 6283 7.937704 TGCGTTGAATTAAAAATTCAGAATCG 58.062 30.769 13.15 15.36 38.98 3.34
2205 6311 5.712152 AATGTTGAAGTCAATCTCCCAAC 57.288 39.130 0.00 0.00 38.24 3.77
2216 6322 2.762535 TCTCCCAACGAAATCCAGTC 57.237 50.000 0.00 0.00 0.00 3.51
2221 6327 2.617788 CCCAACGAAATCCAGTCATCCA 60.618 50.000 0.00 0.00 0.00 3.41
2250 6358 7.810766 TCAGACAACTTGAAATTCACAAAAC 57.189 32.000 0.00 0.00 0.00 2.43
2252 6360 6.035975 CAGACAACTTGAAATTCACAAAACCC 59.964 38.462 0.00 0.00 0.00 4.11
2254 6362 4.415881 ACTTGAAATTCACAAAACCCCC 57.584 40.909 0.00 0.00 0.00 5.40
2256 6364 2.667470 TGAAATTCACAAAACCCCCGA 58.333 42.857 0.00 0.00 0.00 5.14
2275 6706 7.157347 CCCCCGAATTATTACTACCTTTCTAC 58.843 42.308 0.00 0.00 0.00 2.59
2304 6743 8.133627 AGGTTAGCTATGTAAACACATACTACG 58.866 37.037 0.00 0.00 0.00 3.51
2309 7239 6.255020 GCTATGTAAACACATACTACGTGCTT 59.745 38.462 0.00 0.00 37.93 3.91
2310 7240 7.433131 GCTATGTAAACACATACTACGTGCTTA 59.567 37.037 0.00 0.00 37.93 3.09
2311 7241 7.751047 ATGTAAACACATACTACGTGCTTAG 57.249 36.000 0.00 0.00 37.93 2.18
2312 7242 6.094719 TGTAAACACATACTACGTGCTTAGG 58.905 40.000 0.00 0.00 37.93 2.69
2318 7248 5.066893 CACATACTACGTGCTTAGGGTCTTA 59.933 44.000 0.00 0.00 0.00 2.10
2319 7249 5.067023 ACATACTACGTGCTTAGGGTCTTAC 59.933 44.000 0.00 0.00 0.00 2.34
2332 7262 5.304686 AGGGTCTTACATGTTTGAGTTCA 57.695 39.130 2.30 0.00 0.00 3.18
2385 7316 6.691754 TCTGAAAAATGTTAGCACAAGTGA 57.308 33.333 4.04 0.00 36.16 3.41
2389 7320 7.264221 TGAAAAATGTTAGCACAAGTGAACAT 58.736 30.769 12.02 12.02 38.70 2.71
2391 7322 9.410556 GAAAAATGTTAGCACAAGTGAACATAT 57.589 29.630 16.00 9.02 37.17 1.78
2399 7330 7.664082 AGCACAAGTGAACATATATATGAGC 57.336 36.000 26.05 17.38 37.15 4.26
2400 7331 7.219322 AGCACAAGTGAACATATATATGAGCA 58.781 34.615 26.05 19.32 37.15 4.26
2401 7332 7.716560 AGCACAAGTGAACATATATATGAGCAA 59.283 33.333 26.05 8.42 37.15 3.91
2423 7354 6.139169 GCAAAACTATTCGAAATGTGCTATCG 59.861 38.462 0.00 0.00 37.90 2.92
2495 7438 8.149647 TGATTTTCTGTATTGTTGGCAAGATTT 58.850 29.630 0.00 0.00 38.10 2.17
2572 7675 2.880890 GCAGAGCCCATGTACCATTAAG 59.119 50.000 0.00 0.00 0.00 1.85
2595 7698 0.676151 CTTGTTGCTGCCCTCTCCTC 60.676 60.000 0.00 0.00 0.00 3.71
2608 7711 1.981495 CTCTCCTCCCACCAGTTCTTT 59.019 52.381 0.00 0.00 0.00 2.52
2714 7833 4.701663 CACTCATGTGCCCTTCGT 57.298 55.556 0.00 0.00 37.38 3.85
2715 7834 2.460330 CACTCATGTGCCCTTCGTC 58.540 57.895 0.00 0.00 37.38 4.20
2739 7858 9.256477 GTCATGTTAATTGCATCAATTCATCAT 57.744 29.630 7.92 8.60 42.19 2.45
2819 7940 6.109156 TCTTCTTTGCTATCACAACACCTA 57.891 37.500 0.00 0.00 0.00 3.08
2830 7951 3.587061 TCACAACACCTATTGGGATCACT 59.413 43.478 0.00 0.00 37.07 3.41
2833 7954 3.914426 ACACCTATTGGGATCACTGTC 57.086 47.619 0.00 0.00 38.76 3.51
2911 8032 4.246712 AGGCATTCTGGATTCAATGTCT 57.753 40.909 0.00 0.00 39.59 3.41
3112 8241 0.936297 CAAGCTGCTTGGCGTTCAAC 60.936 55.000 29.91 0.00 37.77 3.18
3139 8268 0.179108 GACCTGTTGCCTAGCTACCG 60.179 60.000 0.00 0.00 33.72 4.02
3192 8336 7.339212 TCTTTCTCTGTCCATTCTTTTGTTTGA 59.661 33.333 0.00 0.00 0.00 2.69
3219 8363 4.123545 GGTGCTGGGCCGGGTAAT 62.124 66.667 15.62 0.00 0.00 1.89
3235 8379 3.756963 GGGTAATGTCCTCTTTTGGTCAC 59.243 47.826 0.00 0.00 0.00 3.67
3247 8391 4.097892 TCTTTTGGTCACAGAAAAGGAAGC 59.902 41.667 10.07 0.00 38.94 3.86
3275 8419 3.398292 TCTGGGGTACATTTTGGTGGTAA 59.602 43.478 0.00 0.00 0.00 2.85
3322 8466 6.266786 GGGAATAAAGAGTTTTTGAGTCCCAA 59.733 38.462 14.09 0.00 40.65 4.12
3427 11279 4.543590 ATGTGGATCTTCTGAAAGTCGT 57.456 40.909 0.00 0.00 33.95 4.34
3488 11341 2.501723 AGGATGGTTATGAACTCACGCT 59.498 45.455 0.00 0.00 0.00 5.07
3489 11342 3.704566 AGGATGGTTATGAACTCACGCTA 59.295 43.478 0.00 0.00 0.00 4.26
3501 11355 2.297597 ACTCACGCTAGACTCTTTTGCT 59.702 45.455 0.00 0.00 0.00 3.91
3513 11367 3.141398 CTCTTTTGCTGCACCTGTTAGA 58.859 45.455 0.00 0.00 0.00 2.10
3604 11461 6.866010 ACATCGATATTGCAGCAGAAATTA 57.134 33.333 0.00 0.00 0.00 1.40
3665 11524 1.280746 CTGTTGTTGCTGGACTGCG 59.719 57.895 0.00 0.00 35.36 5.18
3668 11527 1.153066 TTGTTGCTGGACTGCGGAA 60.153 52.632 0.00 0.00 35.36 4.30
3702 11561 6.580791 ACACCACGATTAATTTTGTCGAAATG 59.419 34.615 11.96 9.11 37.98 2.32
3763 11622 3.606595 TTCTCCTGATGACTTGAGCTG 57.393 47.619 0.00 0.00 0.00 4.24
3764 11623 2.812658 TCTCCTGATGACTTGAGCTGA 58.187 47.619 0.00 0.00 0.00 4.26
3841 11701 6.014070 TCAAGTTCTAGTAACCCATGCTTGTA 60.014 38.462 0.00 0.00 34.31 2.41
3855 11715 4.550577 TGCTTGTACTGAACAACACATG 57.449 40.909 0.00 0.00 43.22 3.21
3886 11750 9.699410 TTGTATCATTTATTTGTTCCCTCTCAT 57.301 29.630 0.00 0.00 0.00 2.90
3887 11751 9.123902 TGTATCATTTATTTGTTCCCTCTCATG 57.876 33.333 0.00 0.00 0.00 3.07
3895 11759 4.524316 TGTTCCCTCTCATGCAAAAATG 57.476 40.909 0.00 0.00 0.00 2.32
3913 11777 8.382130 GCAAAAATGTGTATTGTATCATTGGTG 58.618 33.333 0.00 0.00 32.05 4.17
3955 11819 1.639722 TCCGGATGTCCTCTGTTGAA 58.360 50.000 0.00 0.00 0.00 2.69
3962 11826 3.228188 TGTCCTCTGTTGAAGGCATTT 57.772 42.857 0.00 0.00 0.00 2.32
3964 11828 2.160417 GTCCTCTGTTGAAGGCATTTCG 59.840 50.000 0.00 0.00 38.71 3.46
3975 11839 0.316196 GGCATTTCGCATACTGTCGC 60.316 55.000 0.00 0.00 45.17 5.19
3990 11854 7.466725 GCATACTGTCGCCAAATGTAAGATTTA 60.467 37.037 0.00 0.00 0.00 1.40
4000 11864 8.295288 GCCAAATGTAAGATTTATGATCTGAGG 58.705 37.037 0.00 0.00 0.00 3.86
4006 11870 9.177608 TGTAAGATTTATGATCTGAGGGTTTTG 57.822 33.333 0.00 0.00 0.00 2.44
4019 11883 1.745653 GGGTTTTGCCTAGAGTGCATC 59.254 52.381 0.00 0.00 38.76 3.91
4038 11903 4.785346 ATCTGTATGGTTTCCAGCAGAT 57.215 40.909 21.37 21.37 45.63 2.90
4043 11908 2.787473 TGGTTTCCAGCAGATACCTG 57.213 50.000 14.46 0.00 44.54 4.00
4051 11916 2.277969 CAGCAGATACCTGTGAGCAAG 58.722 52.381 0.00 0.00 42.35 4.01
4060 11925 3.894759 ACCTGTGAGCAAGCATATGATT 58.105 40.909 6.97 2.93 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.526873 ACCTGTGTCCTCGGGCTT 60.527 61.111 0.00 0.00 37.37 4.35
10 11 0.036010 CCTCATGGTGGACCTGTGTC 60.036 60.000 0.00 0.00 40.98 3.67
11 12 0.473694 TCCTCATGGTGGACCTGTGT 60.474 55.000 4.58 0.00 36.82 3.72
12 13 0.914644 ATCCTCATGGTGGACCTGTG 59.085 55.000 9.90 0.00 36.30 3.66
13 14 0.914644 CATCCTCATGGTGGACCTGT 59.085 55.000 9.90 0.00 36.30 4.00
14 15 0.465097 GCATCCTCATGGTGGACCTG 60.465 60.000 9.90 7.43 36.30 4.00
15 16 1.639635 GGCATCCTCATGGTGGACCT 61.640 60.000 9.90 0.00 36.30 3.85
16 17 1.152881 GGCATCCTCATGGTGGACC 60.153 63.158 9.90 5.40 36.30 4.46
17 18 1.524621 CGGCATCCTCATGGTGGAC 60.525 63.158 9.90 0.66 36.30 4.02
18 19 2.910360 CGGCATCCTCATGGTGGA 59.090 61.111 10.07 10.07 38.06 4.02
19 20 2.903855 GCGGCATCCTCATGGTGG 60.904 66.667 0.00 0.00 34.23 4.61
20 21 2.903855 GGCGGCATCCTCATGGTG 60.904 66.667 3.07 0.00 34.23 4.17
21 22 4.195334 GGGCGGCATCCTCATGGT 62.195 66.667 12.47 0.00 34.23 3.55
22 23 4.962836 GGGGCGGCATCCTCATGG 62.963 72.222 12.47 0.00 0.00 3.66
23 24 4.193893 TGGGGCGGCATCCTCATG 62.194 66.667 12.47 0.00 29.99 3.07
24 25 4.195334 GTGGGGCGGCATCCTCAT 62.195 66.667 12.47 0.00 39.14 2.90
35 36 4.740822 AGAATGGTGCGGTGGGGC 62.741 66.667 0.00 0.00 0.00 5.80
36 37 2.035626 AAGAATGGTGCGGTGGGG 59.964 61.111 0.00 0.00 0.00 4.96
37 38 2.046285 GGAAGAATGGTGCGGTGGG 61.046 63.158 0.00 0.00 0.00 4.61
38 39 0.609131 AAGGAAGAATGGTGCGGTGG 60.609 55.000 0.00 0.00 0.00 4.61
39 40 0.523072 CAAGGAAGAATGGTGCGGTG 59.477 55.000 0.00 0.00 0.00 4.94
40 41 0.400213 TCAAGGAAGAATGGTGCGGT 59.600 50.000 0.00 0.00 0.00 5.68
41 42 1.200020 GTTCAAGGAAGAATGGTGCGG 59.800 52.381 0.00 0.00 0.00 5.69
42 43 1.879380 TGTTCAAGGAAGAATGGTGCG 59.121 47.619 0.00 0.00 0.00 5.34
43 44 4.051237 GTTTGTTCAAGGAAGAATGGTGC 58.949 43.478 0.00 0.00 0.00 5.01
44 45 5.520376 AGTTTGTTCAAGGAAGAATGGTG 57.480 39.130 0.00 0.00 0.00 4.17
45 46 6.365520 ACTAGTTTGTTCAAGGAAGAATGGT 58.634 36.000 0.00 0.00 0.00 3.55
46 47 6.884280 ACTAGTTTGTTCAAGGAAGAATGG 57.116 37.500 0.00 0.00 0.00 3.16
47 48 7.229506 AGGAACTAGTTTGTTCAAGGAAGAATG 59.770 37.037 10.02 0.00 45.74 2.67
48 49 7.290813 AGGAACTAGTTTGTTCAAGGAAGAAT 58.709 34.615 10.02 0.00 45.74 2.40
49 50 6.659824 AGGAACTAGTTTGTTCAAGGAAGAA 58.340 36.000 10.02 0.00 45.74 2.52
50 51 6.248569 AGGAACTAGTTTGTTCAAGGAAGA 57.751 37.500 10.02 0.00 45.74 2.87
51 52 8.446599 TTTAGGAACTAGTTTGTTCAAGGAAG 57.553 34.615 10.02 0.00 44.25 3.46
52 53 8.990163 ATTTAGGAACTAGTTTGTTCAAGGAA 57.010 30.769 10.02 0.00 44.25 3.36
53 54 7.664318 GGATTTAGGAACTAGTTTGTTCAAGGA 59.336 37.037 10.02 0.00 44.25 3.36
54 55 7.447238 TGGATTTAGGAACTAGTTTGTTCAAGG 59.553 37.037 10.02 0.00 44.25 3.61
55 56 8.391075 TGGATTTAGGAACTAGTTTGTTCAAG 57.609 34.615 10.02 0.00 44.25 3.02
56 57 8.934023 ATGGATTTAGGAACTAGTTTGTTCAA 57.066 30.769 10.02 0.57 44.25 2.69
57 58 7.610305 GGATGGATTTAGGAACTAGTTTGTTCA 59.390 37.037 10.02 1.96 44.25 3.18
58 59 7.067129 GGGATGGATTTAGGAACTAGTTTGTTC 59.933 40.741 10.02 0.00 44.25 3.18
59 60 6.890268 GGGATGGATTTAGGAACTAGTTTGTT 59.110 38.462 10.02 1.40 44.25 2.83
60 61 6.424032 GGGATGGATTTAGGAACTAGTTTGT 58.576 40.000 10.02 2.78 44.25 2.83
61 62 5.828328 GGGGATGGATTTAGGAACTAGTTTG 59.172 44.000 10.02 0.00 44.25 2.93
62 63 5.494706 TGGGGATGGATTTAGGAACTAGTTT 59.505 40.000 10.02 0.00 44.25 2.66
63 64 5.043762 TGGGGATGGATTTAGGAACTAGTT 58.956 41.667 8.13 8.13 44.25 2.24
64 65 4.641868 TGGGGATGGATTTAGGAACTAGT 58.358 43.478 0.00 0.00 44.25 2.57
65 66 5.377478 GTTGGGGATGGATTTAGGAACTAG 58.623 45.833 0.00 0.00 44.25 2.57
66 67 4.167307 GGTTGGGGATGGATTTAGGAACTA 59.833 45.833 0.00 0.00 41.75 2.24
67 68 3.052869 GGTTGGGGATGGATTTAGGAACT 60.053 47.826 0.00 0.00 46.37 3.01
68 69 3.296854 GGTTGGGGATGGATTTAGGAAC 58.703 50.000 0.00 0.00 0.00 3.62
69 70 2.929724 TGGTTGGGGATGGATTTAGGAA 59.070 45.455 0.00 0.00 0.00 3.36
70 71 2.579100 TGGTTGGGGATGGATTTAGGA 58.421 47.619 0.00 0.00 0.00 2.94
71 72 3.618120 ATGGTTGGGGATGGATTTAGG 57.382 47.619 0.00 0.00 0.00 2.69
72 73 5.770162 GTCTTATGGTTGGGGATGGATTTAG 59.230 44.000 0.00 0.00 0.00 1.85
73 74 5.399727 GGTCTTATGGTTGGGGATGGATTTA 60.400 44.000 0.00 0.00 0.00 1.40
74 75 4.546674 GTCTTATGGTTGGGGATGGATTT 58.453 43.478 0.00 0.00 0.00 2.17
75 76 3.117131 GGTCTTATGGTTGGGGATGGATT 60.117 47.826 0.00 0.00 0.00 3.01
76 77 2.447047 GGTCTTATGGTTGGGGATGGAT 59.553 50.000 0.00 0.00 0.00 3.41
77 78 1.850345 GGTCTTATGGTTGGGGATGGA 59.150 52.381 0.00 0.00 0.00 3.41
78 79 1.476833 CGGTCTTATGGTTGGGGATGG 60.477 57.143 0.00 0.00 0.00 3.51
79 80 1.488812 TCGGTCTTATGGTTGGGGATG 59.511 52.381 0.00 0.00 0.00 3.51
80 81 1.887797 TCGGTCTTATGGTTGGGGAT 58.112 50.000 0.00 0.00 0.00 3.85
81 82 1.488812 CATCGGTCTTATGGTTGGGGA 59.511 52.381 0.00 0.00 0.00 4.81
82 83 1.488812 TCATCGGTCTTATGGTTGGGG 59.511 52.381 0.00 0.00 0.00 4.96
83 84 2.561569 GTCATCGGTCTTATGGTTGGG 58.438 52.381 0.00 0.00 0.00 4.12
84 85 2.170607 AGGTCATCGGTCTTATGGTTGG 59.829 50.000 0.00 0.00 0.00 3.77
85 86 3.458189 GAGGTCATCGGTCTTATGGTTG 58.542 50.000 0.00 0.00 0.00 3.77
86 87 3.821421 GAGGTCATCGGTCTTATGGTT 57.179 47.619 0.00 0.00 0.00 3.67
98 99 5.044558 GGATACTTTTCTGACGAGGTCATC 58.955 45.833 0.00 0.00 41.94 2.92
99 100 4.440250 CGGATACTTTTCTGACGAGGTCAT 60.440 45.833 0.00 0.00 41.94 3.06
100 101 3.119602 CGGATACTTTTCTGACGAGGTCA 60.120 47.826 0.00 0.00 40.50 4.02
101 102 3.128242 TCGGATACTTTTCTGACGAGGTC 59.872 47.826 0.00 0.00 0.00 3.85
102 103 3.087031 TCGGATACTTTTCTGACGAGGT 58.913 45.455 0.00 0.00 0.00 3.85
103 104 3.777465 TCGGATACTTTTCTGACGAGG 57.223 47.619 0.00 0.00 0.00 4.63
104 105 6.462073 TTTTTCGGATACTTTTCTGACGAG 57.538 37.500 0.00 0.00 30.76 4.18
105 106 6.872020 AGATTTTTCGGATACTTTTCTGACGA 59.128 34.615 0.00 0.00 30.76 4.20
106 107 7.061752 AGATTTTTCGGATACTTTTCTGACG 57.938 36.000 0.00 0.00 30.76 4.35
114 115 9.769093 CGTTGAATAAAGATTTTTCGGATACTT 57.231 29.630 0.00 0.00 0.00 2.24
115 116 8.943002 ACGTTGAATAAAGATTTTTCGGATACT 58.057 29.630 0.00 0.00 0.00 2.12
116 117 9.207042 GACGTTGAATAAAGATTTTTCGGATAC 57.793 33.333 0.00 0.00 0.00 2.24
117 118 8.111836 CGACGTTGAATAAAGATTTTTCGGATA 58.888 33.333 0.00 0.00 0.00 2.59
118 119 6.959311 CGACGTTGAATAAAGATTTTTCGGAT 59.041 34.615 0.00 0.00 0.00 4.18
119 120 6.073657 ACGACGTTGAATAAAGATTTTTCGGA 60.074 34.615 10.51 0.00 0.00 4.55
120 121 6.075280 ACGACGTTGAATAAAGATTTTTCGG 58.925 36.000 10.51 0.00 0.00 4.30
121 122 6.788458 TGACGACGTTGAATAAAGATTTTTCG 59.212 34.615 10.51 0.00 0.00 3.46
122 123 8.655378 ATGACGACGTTGAATAAAGATTTTTC 57.345 30.769 10.51 0.00 0.00 2.29
123 124 7.477422 CGATGACGACGTTGAATAAAGATTTTT 59.523 33.333 10.51 0.00 42.66 1.94
124 125 6.953743 CGATGACGACGTTGAATAAAGATTTT 59.046 34.615 10.51 0.00 42.66 1.82
125 126 6.090358 ACGATGACGACGTTGAATAAAGATTT 59.910 34.615 10.51 0.00 41.18 2.17
126 127 5.575606 ACGATGACGACGTTGAATAAAGATT 59.424 36.000 10.51 0.00 41.18 2.40
127 128 5.100259 ACGATGACGACGTTGAATAAAGAT 58.900 37.500 10.51 0.00 41.18 2.40
128 129 4.478699 ACGATGACGACGTTGAATAAAGA 58.521 39.130 10.51 0.00 41.18 2.52
129 130 4.797215 GACGATGACGACGTTGAATAAAG 58.203 43.478 10.51 0.00 43.97 1.85
130 131 4.811158 GACGATGACGACGTTGAATAAA 57.189 40.909 10.51 0.00 43.97 1.40
140 141 2.943034 GGCGACGACGATGACGAC 60.943 66.667 12.29 0.00 42.66 4.34
152 153 3.479269 CGTCTTGGCTTCGGCGAC 61.479 66.667 10.16 0.00 42.91 5.19
153 154 1.659622 TATCGTCTTGGCTTCGGCGA 61.660 55.000 4.99 4.99 42.91 5.54
154 155 0.804544 TTATCGTCTTGGCTTCGGCG 60.805 55.000 0.00 0.00 42.91 6.46
155 156 1.365699 TTTATCGTCTTGGCTTCGGC 58.634 50.000 0.00 0.00 40.88 5.54
156 157 4.569162 TGTTATTTATCGTCTTGGCTTCGG 59.431 41.667 0.00 0.00 0.00 4.30
157 158 5.712217 TGTTATTTATCGTCTTGGCTTCG 57.288 39.130 0.00 0.00 0.00 3.79
158 159 6.458342 CCCTTGTTATTTATCGTCTTGGCTTC 60.458 42.308 0.00 0.00 0.00 3.86
159 160 5.357032 CCCTTGTTATTTATCGTCTTGGCTT 59.643 40.000 0.00 0.00 0.00 4.35
160 161 4.881850 CCCTTGTTATTTATCGTCTTGGCT 59.118 41.667 0.00 0.00 0.00 4.75
161 162 4.879545 TCCCTTGTTATTTATCGTCTTGGC 59.120 41.667 0.00 0.00 0.00 4.52
162 163 6.113411 ACTCCCTTGTTATTTATCGTCTTGG 58.887 40.000 0.00 0.00 0.00 3.61
163 164 8.712285 TTACTCCCTTGTTATTTATCGTCTTG 57.288 34.615 0.00 0.00 0.00 3.02
164 165 9.729281 TTTTACTCCCTTGTTATTTATCGTCTT 57.271 29.630 0.00 0.00 0.00 3.01
165 166 9.901172 ATTTTACTCCCTTGTTATTTATCGTCT 57.099 29.630 0.00 0.00 0.00 4.18
167 168 8.823818 CGATTTTACTCCCTTGTTATTTATCGT 58.176 33.333 0.00 0.00 0.00 3.73
168 169 9.037737 TCGATTTTACTCCCTTGTTATTTATCG 57.962 33.333 0.00 0.00 0.00 2.92
171 172 9.333724 GGATCGATTTTACTCCCTTGTTATTTA 57.666 33.333 0.00 0.00 0.00 1.40
172 173 7.832187 TGGATCGATTTTACTCCCTTGTTATTT 59.168 33.333 0.00 0.00 0.00 1.40
173 174 7.282450 GTGGATCGATTTTACTCCCTTGTTATT 59.718 37.037 0.00 0.00 0.00 1.40
174 175 6.766467 GTGGATCGATTTTACTCCCTTGTTAT 59.234 38.462 0.00 0.00 0.00 1.89
175 176 6.110707 GTGGATCGATTTTACTCCCTTGTTA 58.889 40.000 0.00 0.00 0.00 2.41
176 177 4.941873 GTGGATCGATTTTACTCCCTTGTT 59.058 41.667 0.00 0.00 0.00 2.83
177 178 4.019681 TGTGGATCGATTTTACTCCCTTGT 60.020 41.667 0.00 0.00 0.00 3.16
178 179 4.513442 TGTGGATCGATTTTACTCCCTTG 58.487 43.478 0.00 0.00 0.00 3.61
179 180 4.837093 TGTGGATCGATTTTACTCCCTT 57.163 40.909 0.00 0.00 0.00 3.95
180 181 4.164221 ACATGTGGATCGATTTTACTCCCT 59.836 41.667 0.00 0.00 0.00 4.20
181 182 4.273480 CACATGTGGATCGATTTTACTCCC 59.727 45.833 18.51 0.00 0.00 4.30
182 183 5.409643 CACATGTGGATCGATTTTACTCC 57.590 43.478 18.51 0.00 0.00 3.85
211 212 2.044650 TCGTCGGTAGTGAGGGGG 60.045 66.667 0.00 0.00 0.00 5.40
212 213 2.413142 GGTCGTCGGTAGTGAGGGG 61.413 68.421 0.00 0.00 0.00 4.79
213 214 2.758089 CGGTCGTCGGTAGTGAGGG 61.758 68.421 0.00 0.00 34.75 4.30
214 215 1.703438 CTCGGTCGTCGGTAGTGAGG 61.703 65.000 0.00 0.00 39.77 3.86
215 216 1.703438 CCTCGGTCGTCGGTAGTGAG 61.703 65.000 0.00 0.00 39.77 3.51
216 217 1.742880 CCTCGGTCGTCGGTAGTGA 60.743 63.158 0.00 0.00 39.77 3.41
217 218 1.975363 GACCTCGGTCGTCGGTAGTG 61.975 65.000 0.00 0.00 39.77 2.74
218 219 1.743252 GACCTCGGTCGTCGGTAGT 60.743 63.158 0.00 0.00 39.77 2.73
219 220 3.096791 GACCTCGGTCGTCGGTAG 58.903 66.667 0.00 0.00 39.77 3.18
243 244 3.077556 TTCCAGCGGCTCTCCTCC 61.078 66.667 0.00 0.00 0.00 4.30
244 245 1.398958 ATCTTCCAGCGGCTCTCCTC 61.399 60.000 0.00 0.00 0.00 3.71
245 246 0.980231 AATCTTCCAGCGGCTCTCCT 60.980 55.000 0.00 0.00 0.00 3.69
246 247 0.813210 CAATCTTCCAGCGGCTCTCC 60.813 60.000 0.00 0.00 0.00 3.71
247 248 0.813210 CCAATCTTCCAGCGGCTCTC 60.813 60.000 0.00 0.00 0.00 3.20
248 249 1.222936 CCAATCTTCCAGCGGCTCT 59.777 57.895 0.00 0.00 0.00 4.09
249 250 1.078143 ACCAATCTTCCAGCGGCTC 60.078 57.895 0.00 0.00 0.00 4.70
250 251 1.078143 GACCAATCTTCCAGCGGCT 60.078 57.895 0.00 0.00 0.00 5.52
251 252 1.078143 AGACCAATCTTCCAGCGGC 60.078 57.895 0.00 0.00 0.00 6.53
252 253 0.539051 AGAGACCAATCTTCCAGCGG 59.461 55.000 0.00 0.00 34.34 5.52
253 254 1.472376 GGAGAGACCAATCTTCCAGCG 60.472 57.143 0.00 0.00 34.34 5.18
254 255 1.836802 AGGAGAGACCAATCTTCCAGC 59.163 52.381 0.00 0.00 42.04 4.85
255 256 2.170187 CCAGGAGAGACCAATCTTCCAG 59.830 54.545 0.00 2.04 42.04 3.86
256 257 2.191400 CCAGGAGAGACCAATCTTCCA 58.809 52.381 0.00 0.00 42.04 3.53
257 258 1.134250 GCCAGGAGAGACCAATCTTCC 60.134 57.143 0.00 0.00 42.04 3.46
258 259 1.472376 CGCCAGGAGAGACCAATCTTC 60.472 57.143 0.00 0.00 42.04 2.87
259 260 0.539051 CGCCAGGAGAGACCAATCTT 59.461 55.000 0.00 0.00 42.04 2.40
260 261 1.333636 CCGCCAGGAGAGACCAATCT 61.334 60.000 0.00 0.00 42.04 2.40
261 262 1.144936 CCGCCAGGAGAGACCAATC 59.855 63.158 0.00 0.00 42.04 2.67
262 263 3.036429 GCCGCCAGGAGAGACCAAT 62.036 63.158 0.00 0.00 42.04 3.16
263 264 3.706373 GCCGCCAGGAGAGACCAA 61.706 66.667 0.00 0.00 42.04 3.67
277 278 4.530857 CTGGAACCCTAGCCGCCG 62.531 72.222 0.00 0.00 0.00 6.46
278 279 4.858680 GCTGGAACCCTAGCCGCC 62.859 72.222 0.00 0.00 33.89 6.13
282 283 4.858680 GGCGGCTGGAACCCTAGC 62.859 72.222 0.00 0.00 39.17 3.42
283 284 3.399181 TGGCGGCTGGAACCCTAG 61.399 66.667 11.43 0.00 0.00 3.02
284 285 3.712907 GTGGCGGCTGGAACCCTA 61.713 66.667 11.43 0.00 0.00 3.53
296 297 2.742710 TTTCACTCTCGTCCGTGGCG 62.743 60.000 0.00 0.00 0.00 5.69
297 298 1.006571 TTTCACTCTCGTCCGTGGC 60.007 57.895 0.00 0.00 0.00 5.01
298 299 1.002250 CGTTTCACTCTCGTCCGTGG 61.002 60.000 0.00 0.00 0.00 4.94
299 300 0.040692 TCGTTTCACTCTCGTCCGTG 60.041 55.000 0.00 0.00 0.00 4.94
300 301 0.879765 ATCGTTTCACTCTCGTCCGT 59.120 50.000 0.00 0.00 0.00 4.69
301 302 1.536149 GATCGTTTCACTCTCGTCCG 58.464 55.000 0.00 0.00 0.00 4.79
302 303 1.536149 CGATCGTTTCACTCTCGTCC 58.464 55.000 7.03 0.00 0.00 4.79
303 304 1.135746 ACCGATCGTTTCACTCTCGTC 60.136 52.381 15.09 0.00 0.00 4.20
304 305 0.879765 ACCGATCGTTTCACTCTCGT 59.120 50.000 15.09 0.00 0.00 4.18
305 306 1.649171 CAACCGATCGTTTCACTCTCG 59.351 52.381 15.09 0.00 29.93 4.04
306 307 2.942710 TCAACCGATCGTTTCACTCTC 58.057 47.619 15.09 0.00 29.93 3.20
307 308 3.594603 ATCAACCGATCGTTTCACTCT 57.405 42.857 15.09 0.00 29.93 3.24
308 309 3.797256 CCTATCAACCGATCGTTTCACTC 59.203 47.826 15.09 0.00 32.73 3.51
309 310 3.194968 ACCTATCAACCGATCGTTTCACT 59.805 43.478 15.09 0.00 32.73 3.41
310 311 3.518590 ACCTATCAACCGATCGTTTCAC 58.481 45.455 15.09 0.00 32.73 3.18
311 312 3.880047 ACCTATCAACCGATCGTTTCA 57.120 42.857 15.09 0.00 32.73 2.69
312 313 5.585390 TCTAACCTATCAACCGATCGTTTC 58.415 41.667 15.09 0.00 32.73 2.78
313 314 5.587388 TCTAACCTATCAACCGATCGTTT 57.413 39.130 15.09 2.47 32.73 3.60
314 315 5.126707 AGTTCTAACCTATCAACCGATCGTT 59.873 40.000 15.09 5.76 32.73 3.85
315 316 4.643784 AGTTCTAACCTATCAACCGATCGT 59.356 41.667 15.09 0.00 32.73 3.73
316 317 4.976731 CAGTTCTAACCTATCAACCGATCG 59.023 45.833 8.51 8.51 32.73 3.69
317 318 5.290386 CCAGTTCTAACCTATCAACCGATC 58.710 45.833 0.00 0.00 32.73 3.69
318 319 4.101119 CCCAGTTCTAACCTATCAACCGAT 59.899 45.833 0.00 0.00 35.50 4.18
319 320 3.449737 CCCAGTTCTAACCTATCAACCGA 59.550 47.826 0.00 0.00 0.00 4.69
320 321 3.449737 TCCCAGTTCTAACCTATCAACCG 59.550 47.826 0.00 0.00 0.00 4.44
321 322 5.431179 TTCCCAGTTCTAACCTATCAACC 57.569 43.478 0.00 0.00 0.00 3.77
322 323 6.542735 GGAATTCCCAGTTCTAACCTATCAAC 59.457 42.308 14.03 0.00 34.14 3.18
323 324 6.447084 AGGAATTCCCAGTTCTAACCTATCAA 59.553 38.462 21.22 0.00 37.41 2.57
324 325 5.970640 AGGAATTCCCAGTTCTAACCTATCA 59.029 40.000 21.22 0.00 37.41 2.15
325 326 6.099845 TCAGGAATTCCCAGTTCTAACCTATC 59.900 42.308 21.22 0.00 37.41 2.08
326 327 5.970640 TCAGGAATTCCCAGTTCTAACCTAT 59.029 40.000 21.22 0.00 37.41 2.57
327 328 5.347124 TCAGGAATTCCCAGTTCTAACCTA 58.653 41.667 21.22 0.00 37.41 3.08
328 329 4.175962 TCAGGAATTCCCAGTTCTAACCT 58.824 43.478 21.22 0.00 37.41 3.50
329 330 4.225267 TCTCAGGAATTCCCAGTTCTAACC 59.775 45.833 21.22 0.00 37.41 2.85
330 331 5.422214 TCTCAGGAATTCCCAGTTCTAAC 57.578 43.478 21.22 0.00 37.41 2.34
331 332 4.471386 CCTCTCAGGAATTCCCAGTTCTAA 59.529 45.833 21.22 0.74 37.67 2.10
332 333 4.033709 CCTCTCAGGAATTCCCAGTTCTA 58.966 47.826 21.22 1.09 37.67 2.10
333 334 2.843113 CCTCTCAGGAATTCCCAGTTCT 59.157 50.000 21.22 0.00 37.67 3.01
334 335 2.682269 GCCTCTCAGGAATTCCCAGTTC 60.682 54.545 21.22 7.33 37.67 3.01
335 336 1.283321 GCCTCTCAGGAATTCCCAGTT 59.717 52.381 21.22 0.00 37.67 3.16
336 337 0.915364 GCCTCTCAGGAATTCCCAGT 59.085 55.000 21.22 0.00 37.67 4.00
337 338 1.211456 AGCCTCTCAGGAATTCCCAG 58.789 55.000 21.22 16.58 37.67 4.45
338 339 1.561542 GAAGCCTCTCAGGAATTCCCA 59.438 52.381 21.22 7.21 37.67 4.37
339 340 1.561542 TGAAGCCTCTCAGGAATTCCC 59.438 52.381 21.22 3.70 37.67 3.97
340 341 2.637947 GTGAAGCCTCTCAGGAATTCC 58.362 52.381 17.31 17.31 37.67 3.01
341 342 2.275318 CGTGAAGCCTCTCAGGAATTC 58.725 52.381 0.00 0.00 37.67 2.17
342 343 1.625818 ACGTGAAGCCTCTCAGGAATT 59.374 47.619 7.51 0.00 37.67 2.17
343 344 1.270907 ACGTGAAGCCTCTCAGGAAT 58.729 50.000 7.51 0.00 37.67 3.01
344 345 1.919240 TACGTGAAGCCTCTCAGGAA 58.081 50.000 0.00 0.00 37.67 3.36
345 346 2.145397 ATACGTGAAGCCTCTCAGGA 57.855 50.000 0.00 0.00 37.67 3.86
346 347 4.386867 TTTATACGTGAAGCCTCTCAGG 57.613 45.455 0.00 0.64 38.80 3.86
347 348 5.063564 GGTTTTTATACGTGAAGCCTCTCAG 59.936 44.000 0.00 0.00 0.00 3.35
348 349 4.933400 GGTTTTTATACGTGAAGCCTCTCA 59.067 41.667 0.00 0.00 0.00 3.27
349 350 4.032558 CGGTTTTTATACGTGAAGCCTCTC 59.967 45.833 0.00 0.00 0.00 3.20
350 351 3.930848 CGGTTTTTATACGTGAAGCCTCT 59.069 43.478 0.00 0.00 0.00 3.69
351 352 3.681417 ACGGTTTTTATACGTGAAGCCTC 59.319 43.478 0.00 0.00 39.64 4.70
352 353 3.667360 ACGGTTTTTATACGTGAAGCCT 58.333 40.909 0.00 0.00 39.64 4.58
359 360 4.682860 CACTCTCACACGGTTTTTATACGT 59.317 41.667 0.00 0.00 42.17 3.57
360 361 4.682860 ACACTCTCACACGGTTTTTATACG 59.317 41.667 0.00 0.00 0.00 3.06
361 362 6.089954 GGTACACTCTCACACGGTTTTTATAC 59.910 42.308 0.00 0.00 0.00 1.47
362 363 6.015180 AGGTACACTCTCACACGGTTTTTATA 60.015 38.462 0.00 0.00 0.00 0.98
363 364 4.992951 GGTACACTCTCACACGGTTTTTAT 59.007 41.667 0.00 0.00 0.00 1.40
364 365 4.099881 AGGTACACTCTCACACGGTTTTTA 59.900 41.667 0.00 0.00 0.00 1.52
373 374 2.031420 CGACGAAAGGTACACTCTCACA 60.031 50.000 0.00 0.00 0.00 3.58
375 376 1.538512 CCGACGAAAGGTACACTCTCA 59.461 52.381 0.00 0.00 0.00 3.27
404 405 1.818221 GAGTTGCGTTGCGTTCGACT 61.818 55.000 0.00 0.00 0.00 4.18
405 406 1.436606 GAGTTGCGTTGCGTTCGAC 60.437 57.895 0.00 0.00 0.00 4.20
406 407 1.149361 AAGAGTTGCGTTGCGTTCGA 61.149 50.000 0.00 0.00 0.00 3.71
407 408 0.718220 GAAGAGTTGCGTTGCGTTCG 60.718 55.000 0.00 0.00 0.00 3.95
408 409 0.384353 GGAAGAGTTGCGTTGCGTTC 60.384 55.000 0.00 0.00 0.00 3.95
409 410 1.647084 GGAAGAGTTGCGTTGCGTT 59.353 52.632 0.00 0.00 0.00 4.84
410 411 2.251642 GGGAAGAGTTGCGTTGCGT 61.252 57.895 0.00 0.00 0.00 5.24
411 412 2.175184 CTGGGAAGAGTTGCGTTGCG 62.175 60.000 0.00 0.00 0.00 4.85
412 413 1.166531 ACTGGGAAGAGTTGCGTTGC 61.167 55.000 0.00 0.00 0.00 4.17
413 414 2.069273 CTACTGGGAAGAGTTGCGTTG 58.931 52.381 0.00 0.00 0.00 4.10
414 415 1.968493 TCTACTGGGAAGAGTTGCGTT 59.032 47.619 0.00 0.00 0.00 4.84
415 416 1.629043 TCTACTGGGAAGAGTTGCGT 58.371 50.000 0.00 0.00 0.00 5.24
416 417 2.969628 ATCTACTGGGAAGAGTTGCG 57.030 50.000 0.00 0.00 0.00 4.85
417 418 6.116126 ACAATAATCTACTGGGAAGAGTTGC 58.884 40.000 0.00 0.00 0.00 4.17
418 419 8.454106 CAAACAATAATCTACTGGGAAGAGTTG 58.546 37.037 0.00 0.00 0.00 3.16
419 420 8.164070 ACAAACAATAATCTACTGGGAAGAGTT 58.836 33.333 0.00 0.00 0.00 3.01
420 421 7.607991 CACAAACAATAATCTACTGGGAAGAGT 59.392 37.037 0.00 0.00 0.00 3.24
421 422 7.824289 TCACAAACAATAATCTACTGGGAAGAG 59.176 37.037 0.00 0.00 0.00 2.85
422 423 7.685481 TCACAAACAATAATCTACTGGGAAGA 58.315 34.615 0.00 0.00 0.00 2.87
423 424 7.824289 TCTCACAAACAATAATCTACTGGGAAG 59.176 37.037 0.00 0.00 0.00 3.46
424 425 7.685481 TCTCACAAACAATAATCTACTGGGAA 58.315 34.615 0.00 0.00 0.00 3.97
425 426 7.252612 TCTCACAAACAATAATCTACTGGGA 57.747 36.000 0.00 0.00 0.00 4.37
426 427 8.511604 AATCTCACAAACAATAATCTACTGGG 57.488 34.615 0.00 0.00 0.00 4.45
427 428 8.331022 CGAATCTCACAAACAATAATCTACTGG 58.669 37.037 0.00 0.00 0.00 4.00
428 429 8.873830 ACGAATCTCACAAACAATAATCTACTG 58.126 33.333 0.00 0.00 0.00 2.74
464 1423 1.342819 GATCTCGCCTTGGCTCTACAT 59.657 52.381 10.12 0.00 0.00 2.29
604 1567 2.767445 GGGCCGGCATTTCGTTACC 61.767 63.158 30.85 13.16 0.00 2.85
680 1644 2.220586 TCAGTGGGTCGCCATGGAA 61.221 57.895 18.40 0.00 0.00 3.53
684 1648 4.082523 CCGTCAGTGGGTCGCCAT 62.083 66.667 0.00 0.00 0.00 4.40
690 1654 2.814835 GGTCCAACCGTCAGTGGGT 61.815 63.158 0.00 0.00 40.98 4.51
702 1666 2.122324 TGGGTCCTTCGGGTCCAA 60.122 61.111 0.00 0.00 43.62 3.53
706 1670 3.157680 CAACTGGGTCCTTCGGGT 58.842 61.111 0.00 0.00 36.28 5.28
711 1675 2.594592 GCGTGCAACTGGGTCCTT 60.595 61.111 0.00 0.00 31.75 3.36
719 1683 4.908687 TCAGGCGTGCGTGCAACT 62.909 61.111 9.53 0.00 36.28 3.16
720 1684 4.666532 GTCAGGCGTGCGTGCAAC 62.667 66.667 9.53 0.73 36.28 4.17
799 1764 2.267961 GGTGTCGTCATCCCCACC 59.732 66.667 0.00 0.00 40.47 4.61
800 1765 2.240162 GAGGGTGTCGTCATCCCCAC 62.240 65.000 8.42 0.00 45.46 4.61
801 1766 1.987855 GAGGGTGTCGTCATCCCCA 60.988 63.158 8.42 0.00 45.46 4.96
853 1822 2.738139 CAGACACATGCGTCGCCA 60.738 61.111 15.88 3.10 40.98 5.69
854 1823 4.152625 GCAGACACATGCGTCGCC 62.153 66.667 15.88 0.00 40.98 5.54
903 1875 2.727544 CCAATTTATGGGCGGCCG 59.272 61.111 24.05 24.05 46.27 6.13
906 1878 7.281999 AATGAAATTAAACCAATTTATGGGCGG 59.718 33.333 0.00 0.00 44.90 6.13
907 1879 8.207521 AATGAAATTAAACCAATTTATGGGCG 57.792 30.769 0.00 0.00 44.90 6.13
908 1880 8.620416 GGAATGAAATTAAACCAATTTATGGGC 58.380 33.333 0.00 0.00 46.14 5.36
909 1881 9.904198 AGGAATGAAATTAAACCAATTTATGGG 57.096 29.630 0.00 0.00 46.14 4.00
1045 2050 8.043710 TGTGAAGAAGAAGAAGAAAGAAGACTT 58.956 33.333 0.00 0.00 38.05 3.01
1046 2051 7.560368 TGTGAAGAAGAAGAAGAAAGAAGACT 58.440 34.615 0.00 0.00 0.00 3.24
1047 2052 7.518211 GCTGTGAAGAAGAAGAAGAAAGAAGAC 60.518 40.741 0.00 0.00 0.00 3.01
1048 2053 6.481644 GCTGTGAAGAAGAAGAAGAAAGAAGA 59.518 38.462 0.00 0.00 0.00 2.87
1049 2054 6.563753 CGCTGTGAAGAAGAAGAAGAAAGAAG 60.564 42.308 0.00 0.00 0.00 2.85
1050 2055 5.235186 CGCTGTGAAGAAGAAGAAGAAAGAA 59.765 40.000 0.00 0.00 0.00 2.52
1051 2056 4.747108 CGCTGTGAAGAAGAAGAAGAAAGA 59.253 41.667 0.00 0.00 0.00 2.52
1052 2057 4.084118 CCGCTGTGAAGAAGAAGAAGAAAG 60.084 45.833 0.00 0.00 0.00 2.62
1053 2058 3.809832 CCGCTGTGAAGAAGAAGAAGAAA 59.190 43.478 0.00 0.00 0.00 2.52
1080 2085 2.744202 AGACACAATTCTGAACGCCATC 59.256 45.455 0.00 0.00 0.00 3.51
1096 2101 1.193426 GCAAGACGAAGAAGCAGACAC 59.807 52.381 0.00 0.00 0.00 3.67
1097 2102 1.069204 AGCAAGACGAAGAAGCAGACA 59.931 47.619 0.00 0.00 0.00 3.41
1098 2103 1.458827 CAGCAAGACGAAGAAGCAGAC 59.541 52.381 0.00 0.00 0.00 3.51
1099 2104 1.788258 CAGCAAGACGAAGAAGCAGA 58.212 50.000 0.00 0.00 0.00 4.26
1113 2118 1.595655 TAGAACAACGCGGCAGCAA 60.596 52.632 12.47 0.00 45.49 3.91
1249 2274 9.747898 CCCCTTAATTAGCACATATATTTACCA 57.252 33.333 0.00 0.00 0.00 3.25
1260 2285 6.153680 CCACAAATAACCCCTTAATTAGCACA 59.846 38.462 0.00 0.00 0.00 4.57
1261 2286 6.153851 ACCACAAATAACCCCTTAATTAGCAC 59.846 38.462 0.00 0.00 0.00 4.40
1276 2301 9.984190 GGGTTTAGTGAAAATAACCACAAATAA 57.016 29.630 0.00 0.00 41.39 1.40
1282 2307 6.072342 ACGATGGGTTTAGTGAAAATAACCAC 60.072 38.462 0.00 0.00 41.39 4.16
2047 3092 4.821589 GCTTGGGACGGCCTCTCG 62.822 72.222 7.57 0.00 0.00 4.04
2074 3119 1.800315 CCGTACCTGCGAGACAACG 60.800 63.158 0.00 0.00 0.00 4.10
2136 6234 7.295201 TCAACGCATAAAAGATGTGACTTAAC 58.705 34.615 5.17 0.00 34.00 2.01
2169 6273 9.166173 TGACTTCAACATTATTCGATTCTGAAT 57.834 29.630 1.81 1.81 41.32 2.57
2179 6283 7.630242 TGGGAGATTGACTTCAACATTATTC 57.370 36.000 0.00 0.00 38.86 1.75
2186 6290 3.399330 TCGTTGGGAGATTGACTTCAAC 58.601 45.455 0.00 0.00 38.86 3.18
2205 6311 4.877823 TGATCTTTGGATGACTGGATTTCG 59.122 41.667 0.00 0.00 31.46 3.46
2216 6322 6.564709 TTCAAGTTGTCTGATCTTTGGATG 57.435 37.500 2.11 0.00 31.46 3.51
2221 6327 7.999679 TGTGAATTTCAAGTTGTCTGATCTTT 58.000 30.769 0.00 0.00 0.00 2.52
2250 6358 6.183810 AGAAAGGTAGTAATAATTCGGGGG 57.816 41.667 0.00 0.00 0.00 5.40
2252 6360 6.364435 GCGTAGAAAGGTAGTAATAATTCGGG 59.636 42.308 0.00 0.00 0.00 5.14
2254 6362 7.114529 CCTGCGTAGAAAGGTAGTAATAATTCG 59.885 40.741 0.53 0.00 0.00 3.34
2256 6364 7.789026 ACCTGCGTAGAAAGGTAGTAATAATT 58.211 34.615 0.53 0.00 43.00 1.40
2275 6706 3.930229 TGTGTTTACATAGCTAACCTGCG 59.070 43.478 0.00 0.00 38.13 5.18
2304 6743 5.001232 TCAAACATGTAAGACCCTAAGCAC 58.999 41.667 0.00 0.00 0.00 4.40
2309 7239 6.428083 TGAACTCAAACATGTAAGACCCTA 57.572 37.500 0.00 0.00 0.00 3.53
2310 7240 5.304686 TGAACTCAAACATGTAAGACCCT 57.695 39.130 0.00 0.00 0.00 4.34
2311 7241 4.083271 GCTGAACTCAAACATGTAAGACCC 60.083 45.833 0.00 0.00 0.00 4.46
2312 7242 4.083271 GGCTGAACTCAAACATGTAAGACC 60.083 45.833 0.00 0.00 0.00 3.85
2318 7248 2.620115 CACTGGCTGAACTCAAACATGT 59.380 45.455 0.00 0.00 0.00 3.21
2319 7249 2.880268 TCACTGGCTGAACTCAAACATG 59.120 45.455 0.00 0.00 0.00 3.21
2332 7262 3.973425 AGCATAGGAAATTTCACTGGCT 58.027 40.909 19.49 19.64 0.00 4.75
2374 7305 8.367156 TGCTCATATATATGTTCACTTGTGCTA 58.633 33.333 19.78 0.00 35.26 3.49
2392 7323 7.645340 GCACATTTCGAATAGTTTTGCTCATAT 59.355 33.333 0.00 0.00 0.00 1.78
2393 7324 6.966632 GCACATTTCGAATAGTTTTGCTCATA 59.033 34.615 0.00 0.00 0.00 2.15
2394 7325 5.801947 GCACATTTCGAATAGTTTTGCTCAT 59.198 36.000 0.00 0.00 0.00 2.90
2395 7326 5.048782 AGCACATTTCGAATAGTTTTGCTCA 60.049 36.000 0.00 0.00 32.39 4.26
2396 7327 5.393962 AGCACATTTCGAATAGTTTTGCTC 58.606 37.500 0.00 0.00 32.39 4.26
2397 7328 5.376854 AGCACATTTCGAATAGTTTTGCT 57.623 34.783 0.00 5.13 33.02 3.91
2398 7329 6.139169 CGATAGCACATTTCGAATAGTTTTGC 59.861 38.462 0.00 2.81 34.92 3.68
2399 7330 7.162546 CACGATAGCACATTTCGAATAGTTTTG 59.837 37.037 0.00 0.00 42.67 2.44
2400 7331 7.064134 TCACGATAGCACATTTCGAATAGTTTT 59.936 33.333 0.00 0.00 42.67 2.43
2401 7332 6.533723 TCACGATAGCACATTTCGAATAGTTT 59.466 34.615 0.00 0.00 42.67 2.66
2404 7335 6.696825 ATCACGATAGCACATTTCGAATAG 57.303 37.500 0.00 0.00 42.67 1.73
2405 7336 7.590279 TCTATCACGATAGCACATTTCGAATA 58.410 34.615 8.88 0.00 40.37 1.75
2410 7341 7.413475 AACATCTATCACGATAGCACATTTC 57.587 36.000 8.88 0.00 40.37 2.17
2423 7354 9.346725 GATTTCCAAACTCAAAACATCTATCAC 57.653 33.333 0.00 0.00 0.00 3.06
2486 7429 2.571202 TCCCCATTTCCAAAATCTTGCC 59.429 45.455 0.00 0.00 0.00 4.52
2495 7438 2.955660 GCGATACAATCCCCATTTCCAA 59.044 45.455 0.00 0.00 0.00 3.53
2572 7675 2.282745 AGGGCAGCAACAAGAGGC 60.283 61.111 0.00 0.00 0.00 4.70
2595 7698 0.478507 ACCCTCAAAGAACTGGTGGG 59.521 55.000 0.00 0.00 36.89 4.61
2608 7711 0.758685 CACCCAAGGCAAAACCCTCA 60.759 55.000 0.00 0.00 40.58 3.86
2713 7832 8.637281 TGATGAATTGATGCAATTAACATGAC 57.363 30.769 0.00 0.00 43.05 3.06
2714 7833 9.825109 AATGATGAATTGATGCAATTAACATGA 57.175 25.926 0.00 2.00 43.05 3.07
2739 7858 4.081406 AGCCTGCATTTGTTCATACAGAA 58.919 39.130 0.00 0.00 35.28 3.02
2819 7940 1.915228 CCCCGACAGTGATCCCAAT 59.085 57.895 0.00 0.00 0.00 3.16
2911 8032 8.844865 ATGCCATATAGATCAGTATACCAGAA 57.155 34.615 0.00 0.00 0.00 3.02
3112 8241 2.380410 GGCAACAGGTCGTAGTGCG 61.380 63.158 0.00 0.00 43.01 5.34
3123 8252 1.108776 TACCGGTAGCTAGGCAACAG 58.891 55.000 11.16 0.00 41.41 3.16
3139 8268 3.181464 GCCTCCCATCTTACTCAGTTACC 60.181 52.174 0.00 0.00 0.00 2.85
3192 8336 0.106819 GCCCAGCACCATGAGAAGAT 60.107 55.000 0.00 0.00 0.00 2.40
3214 8358 4.394729 TGTGACCAAAAGAGGACATTACC 58.605 43.478 0.00 0.00 35.86 2.85
3219 8363 3.924114 TTCTGTGACCAAAAGAGGACA 57.076 42.857 0.00 0.00 0.00 4.02
3254 8398 2.302587 ACCACCAAAATGTACCCCAG 57.697 50.000 0.00 0.00 0.00 4.45
3266 8410 4.186077 TGTCCCAATTCTTTACCACCAA 57.814 40.909 0.00 0.00 0.00 3.67
3275 8419 6.045106 TCCCTAACTAACTTGTCCCAATTCTT 59.955 38.462 0.00 0.00 0.00 2.52
3322 8466 4.342862 ACTGTACATCTGCAAAGACTGT 57.657 40.909 0.00 0.00 0.00 3.55
3427 11279 5.009110 TGCCATTGTATTCGAACAGTTGAAA 59.991 36.000 0.00 0.00 0.00 2.69
3488 11341 2.104792 ACAGGTGCAGCAAAAGAGTCTA 59.895 45.455 19.63 0.00 0.00 2.59
3489 11342 1.133976 ACAGGTGCAGCAAAAGAGTCT 60.134 47.619 19.63 0.00 0.00 3.24
3501 11355 5.381757 ACCAAAATAGTTCTAACAGGTGCA 58.618 37.500 0.00 0.00 0.00 4.57
3537 11391 6.931840 AGTTGAGAAAGATCAGTAACCTTCAC 59.068 38.462 0.00 0.00 0.00 3.18
3578 11432 3.795877 TCTGCTGCAATATCGATGTTCA 58.204 40.909 8.54 7.39 0.00 3.18
3582 11436 8.738199 AAATAATTTCTGCTGCAATATCGATG 57.262 30.769 8.54 0.00 0.00 3.84
3585 11439 9.282247 GGATAAATAATTTCTGCTGCAATATCG 57.718 33.333 3.02 0.00 0.00 2.92
3617 11474 8.755018 CAACTAACTGCTTCAATTACAAAAAGG 58.245 33.333 0.00 0.00 0.00 3.11
3639 11498 3.815401 GTCCAGCAACAACAGTATCAACT 59.185 43.478 0.00 0.00 35.91 3.16
3665 11524 5.560966 AATCGTGGTGTACAAATGATTCC 57.439 39.130 16.27 5.70 0.00 3.01
3668 11527 9.352784 CAAAATTAATCGTGGTGTACAAATGAT 57.647 29.630 0.00 2.88 0.00 2.45
3702 11561 7.432869 AGTAGAGACATAGATGAATGAACTGC 58.567 38.462 0.00 0.00 0.00 4.40
3745 11604 3.260740 GTTCAGCTCAAGTCATCAGGAG 58.739 50.000 0.00 0.00 0.00 3.69
3763 11622 5.288952 GCAGTAGAATCTACCAAAGTCGTTC 59.711 44.000 16.12 0.00 0.00 3.95
3764 11623 5.169295 GCAGTAGAATCTACCAAAGTCGTT 58.831 41.667 16.12 0.00 0.00 3.85
3807 11666 9.720769 TGGGTTACTAGAACTTGAAAAATAGAG 57.279 33.333 0.00 0.00 0.00 2.43
3810 11669 8.736244 GCATGGGTTACTAGAACTTGAAAAATA 58.264 33.333 0.00 0.00 0.00 1.40
3811 11670 7.451566 AGCATGGGTTACTAGAACTTGAAAAAT 59.548 33.333 0.00 0.00 0.00 1.82
3815 11675 5.499004 AGCATGGGTTACTAGAACTTGAA 57.501 39.130 0.00 0.00 0.00 2.69
3824 11684 5.012251 TGTTCAGTACAAGCATGGGTTACTA 59.988 40.000 0.00 0.00 32.64 1.82
3886 11750 8.093307 ACCAATGATACAATACACATTTTTGCA 58.907 29.630 0.00 0.00 31.85 4.08
3887 11751 8.382130 CACCAATGATACAATACACATTTTTGC 58.618 33.333 0.00 0.00 31.85 3.68
3895 11759 5.818136 ACAGCACCAATGATACAATACAC 57.182 39.130 0.00 0.00 0.00 2.90
3939 11803 1.003580 TGCCTTCAACAGAGGACATCC 59.996 52.381 0.00 0.00 36.33 3.51
3940 11804 2.479566 TGCCTTCAACAGAGGACATC 57.520 50.000 0.00 0.00 36.33 3.06
3941 11805 3.446442 AATGCCTTCAACAGAGGACAT 57.554 42.857 0.00 0.00 36.33 3.06
3942 11806 2.957402 AATGCCTTCAACAGAGGACA 57.043 45.000 0.00 0.00 36.33 4.02
3943 11807 2.160417 CGAAATGCCTTCAACAGAGGAC 59.840 50.000 0.00 0.00 36.33 3.85
3945 11809 1.135575 GCGAAATGCCTTCAACAGAGG 60.136 52.381 0.00 0.00 37.76 3.69
3955 11819 1.290203 CGACAGTATGCGAAATGCCT 58.710 50.000 0.00 0.00 45.60 4.75
3962 11826 1.006086 CATTTGGCGACAGTATGCGA 58.994 50.000 0.00 0.00 44.54 5.10
3964 11828 3.621268 TCTTACATTTGGCGACAGTATGC 59.379 43.478 13.59 0.00 44.54 3.14
3975 11839 8.790718 CCCTCAGATCATAAATCTTACATTTGG 58.209 37.037 0.00 0.00 0.00 3.28
3990 11854 3.782523 TCTAGGCAAAACCCTCAGATCAT 59.217 43.478 0.00 0.00 40.58 2.45
4000 11864 2.421424 CAGATGCACTCTAGGCAAAACC 59.579 50.000 0.00 0.00 45.60 3.27
4006 11870 2.366916 ACCATACAGATGCACTCTAGGC 59.633 50.000 0.00 0.00 31.13 3.93
4019 11883 4.130118 GGTATCTGCTGGAAACCATACAG 58.870 47.826 11.98 11.98 38.29 2.74
4038 11903 4.694760 ATCATATGCTTGCTCACAGGTA 57.305 40.909 0.00 0.00 0.00 3.08
4039 11904 3.572632 ATCATATGCTTGCTCACAGGT 57.427 42.857 0.00 0.00 0.00 4.00
4043 11908 4.485024 CCTGAATCATATGCTTGCTCAC 57.515 45.455 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.