Multiple sequence alignment - TraesCS7D01G361400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G361400 chr7D 100.000 2531 0 0 1 2531 463976071 463973541 0.000000e+00 4674
1 TraesCS7D01G361400 chr7D 92.821 1978 118 5 1 1963 107723013 107721045 0.000000e+00 2844
2 TraesCS7D01G361400 chr7D 90.655 2001 139 19 1 1967 433075664 433077650 0.000000e+00 2615
3 TraesCS7D01G361400 chr7D 91.864 1475 98 12 1 1473 535833284 535831830 0.000000e+00 2039
4 TraesCS7D01G361400 chr4B 93.191 1968 124 3 1 1967 551784479 551786437 0.000000e+00 2883
5 TraesCS7D01G361400 chr7B 92.803 1973 119 12 1 1967 150841873 150843828 0.000000e+00 2835
6 TraesCS7D01G361400 chr7B 86.842 1064 111 18 33 1082 62879096 62880144 0.000000e+00 1162
7 TraesCS7D01G361400 chr7B 82.857 525 52 15 2006 2526 489132003 489131513 1.080000e-118 436
8 TraesCS7D01G361400 chr1D 92.269 1979 128 8 1 1962 482488709 482486739 0.000000e+00 2784
9 TraesCS7D01G361400 chr6D 92.230 1969 131 12 1 1968 450905733 450907680 0.000000e+00 2769
10 TraesCS7D01G361400 chr6D 83.883 273 36 6 2257 2524 355100607 355100876 1.160000e-63 254
11 TraesCS7D01G361400 chr5A 91.331 1984 146 6 1 1967 78332497 78334471 0.000000e+00 2687
12 TraesCS7D01G361400 chr5A 91.771 960 66 7 1 959 364974820 364973873 0.000000e+00 1323
13 TraesCS7D01G361400 chr5A 84.783 276 32 6 2257 2528 690429659 690429928 4.150000e-68 268
14 TraesCS7D01G361400 chr7A 91.047 1977 135 20 1 1965 141058650 141056704 0.000000e+00 2632
15 TraesCS7D01G361400 chr7A 83.969 262 34 7 2267 2525 8906588 8906332 6.990000e-61 244
16 TraesCS7D01G361400 chr5B 90.512 1971 166 10 1 1967 641300836 641298883 0.000000e+00 2584
17 TraesCS7D01G361400 chr4D 92.476 319 15 2 1 318 56941365 56941675 4.970000e-122 448
18 TraesCS7D01G361400 chr3B 85.441 261 31 5 2267 2523 284952 285209 5.370000e-67 265
19 TraesCS7D01G361400 chr3B 84.871 271 25 11 2265 2526 7079420 7079683 2.500000e-65 259
20 TraesCS7D01G361400 chrUn 85.271 258 30 6 2267 2520 27596919 27597172 2.500000e-65 259
21 TraesCS7D01G361400 chr3D 82.784 273 37 5 2255 2523 184141155 184141421 4.210000e-58 235
22 TraesCS7D01G361400 chr3A 83.521 267 28 10 2266 2526 481087848 481087592 4.210000e-58 235
23 TraesCS7D01G361400 chr2A 83.333 264 35 5 2267 2526 638304415 638304157 4.210000e-58 235


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G361400 chr7D 463973541 463976071 2530 True 4674 4674 100.000 1 2531 1 chr7D.!!$R2 2530
1 TraesCS7D01G361400 chr7D 107721045 107723013 1968 True 2844 2844 92.821 1 1963 1 chr7D.!!$R1 1962
2 TraesCS7D01G361400 chr7D 433075664 433077650 1986 False 2615 2615 90.655 1 1967 1 chr7D.!!$F1 1966
3 TraesCS7D01G361400 chr7D 535831830 535833284 1454 True 2039 2039 91.864 1 1473 1 chr7D.!!$R3 1472
4 TraesCS7D01G361400 chr4B 551784479 551786437 1958 False 2883 2883 93.191 1 1967 1 chr4B.!!$F1 1966
5 TraesCS7D01G361400 chr7B 150841873 150843828 1955 False 2835 2835 92.803 1 1967 1 chr7B.!!$F2 1966
6 TraesCS7D01G361400 chr7B 62879096 62880144 1048 False 1162 1162 86.842 33 1082 1 chr7B.!!$F1 1049
7 TraesCS7D01G361400 chr1D 482486739 482488709 1970 True 2784 2784 92.269 1 1962 1 chr1D.!!$R1 1961
8 TraesCS7D01G361400 chr6D 450905733 450907680 1947 False 2769 2769 92.230 1 1968 1 chr6D.!!$F2 1967
9 TraesCS7D01G361400 chr5A 78332497 78334471 1974 False 2687 2687 91.331 1 1967 1 chr5A.!!$F1 1966
10 TraesCS7D01G361400 chr5A 364973873 364974820 947 True 1323 1323 91.771 1 959 1 chr5A.!!$R1 958
11 TraesCS7D01G361400 chr7A 141056704 141058650 1946 True 2632 2632 91.047 1 1965 1 chr7A.!!$R2 1964
12 TraesCS7D01G361400 chr5B 641298883 641300836 1953 True 2584 2584 90.512 1 1967 1 chr5B.!!$R1 1966

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
184 217 0.030092 CAGTAGAAGGGGGATGGGGA 60.03 60.0 0.0 0.0 0.0 4.81 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2052 2140 0.03779 GCGAGTTGTCTCTCAAGCCT 60.038 55.0 0.0 0.0 38.45 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 1.001181 ACTTTTTCCCGTTCGATCCGA 59.999 47.619 6.58 0.00 0.00 4.55
184 217 0.030092 CAGTAGAAGGGGGATGGGGA 60.030 60.000 0.00 0.00 0.00 4.81
281 322 2.160417 GGCCTTCGTCTTCTTGTTCATG 59.840 50.000 0.00 0.00 0.00 3.07
289 330 0.821301 TTCTTGTTCATGGCCGTGCA 60.821 50.000 20.86 6.64 0.00 4.57
325 375 3.745803 GTCGTCCTCGGCGGAGTT 61.746 66.667 18.79 0.00 44.20 3.01
451 504 1.139058 GATTGCCGTCTCCCAGTACAT 59.861 52.381 0.00 0.00 0.00 2.29
480 533 1.153549 CAGTCGTTAGGAGCCCAGC 60.154 63.158 0.00 0.00 0.00 4.85
482 535 1.192146 AGTCGTTAGGAGCCCAGCAA 61.192 55.000 0.00 0.00 0.00 3.91
604 657 3.071023 AGGTCAGGAATCAACGTCTTCAA 59.929 43.478 0.00 0.00 0.00 2.69
628 681 1.001641 GTGCAGTGGCCCTCTTGAT 60.002 57.895 0.00 0.00 40.13 2.57
632 685 0.393537 CAGTGGCCCTCTTGATCACC 60.394 60.000 0.00 0.00 0.00 4.02
776 829 2.203582 GGGAAGGGGTTGGCGTTT 60.204 61.111 0.00 0.00 0.00 3.60
863 923 0.392595 GTAAGTAGTGGTGGGCAGGC 60.393 60.000 0.00 0.00 0.00 4.85
882 942 2.354805 GGCTGAGTAAATATAGGGGCGG 60.355 54.545 0.00 0.00 0.00 6.13
891 952 0.030909 TATAGGGGCGGTGGAAGGAA 60.031 55.000 0.00 0.00 0.00 3.36
1044 1107 1.069049 GTTGACAACAAGGGCAAGCAT 59.931 47.619 13.52 0.00 36.64 3.79
1100 1163 2.657237 CACCGCCGAGGAAGAACT 59.343 61.111 3.89 0.00 45.00 3.01
1211 1280 0.595095 CCAACTCACTTCTGCAAGGC 59.405 55.000 0.00 0.00 33.37 4.35
1228 1297 1.675641 GCCATCCTTGCACCGAAGT 60.676 57.895 0.00 0.00 0.00 3.01
1296 1365 2.032071 CCGACGGGGTTCAAGCTT 59.968 61.111 5.81 0.00 0.00 3.74
1338 1407 0.606604 GGAAGGTGACGGTGAAGCTA 59.393 55.000 0.00 0.00 0.00 3.32
1353 1422 1.200519 AGCTAATGAACGGCAGGGTA 58.799 50.000 0.00 0.00 0.00 3.69
1380 1449 1.146544 AACAGGGTTGGGCCACCTAT 61.147 55.000 14.86 1.47 39.65 2.57
1565 1635 6.063404 CCTCCTTCCTAAGTACTATCGAGTT 58.937 44.000 0.00 0.00 37.10 3.01
1629 1717 5.078411 AGTGTGGTACTGCTTATCTGAAG 57.922 43.478 0.00 0.00 38.49 3.02
1630 1718 3.619038 GTGTGGTACTGCTTATCTGAAGC 59.381 47.826 2.32 2.32 43.29 3.86
1747 1835 2.108250 AGCCAAAGAGGTTACCACACAT 59.892 45.455 3.51 0.00 40.61 3.21
1781 1869 1.411977 CAACCAAACACCATGCCTTGA 59.588 47.619 0.00 0.00 0.00 3.02
1788 1876 1.682854 ACACCATGCCTTGAGTTTGTG 59.317 47.619 0.00 0.00 0.00 3.33
1830 1918 0.751277 CACCAGGCAGTGTGGTTCAA 60.751 55.000 2.70 0.00 46.73 2.69
1839 1927 0.968405 GTGTGGTTCAACCCATGCAT 59.032 50.000 3.42 0.00 37.50 3.96
1867 1955 0.947180 GCATGCAGGCAACCAAACAG 60.947 55.000 20.11 0.00 37.17 3.16
1868 1956 0.390124 CATGCAGGCAACCAAACAGT 59.610 50.000 0.00 0.00 37.17 3.55
1869 1957 0.675633 ATGCAGGCAACCAAACAGTC 59.324 50.000 0.00 0.00 37.17 3.51
1968 2056 4.639171 GCAACCAAACACGCCCGG 62.639 66.667 0.00 0.00 0.00 5.73
1969 2057 3.972276 CAACCAAACACGCCCGGG 61.972 66.667 19.09 19.09 0.00 5.73
1970 2058 4.509580 AACCAAACACGCCCGGGT 62.510 61.111 24.63 0.00 0.00 5.28
1980 2068 3.062466 GCCCGGGTGCTCCTTTTC 61.062 66.667 24.63 0.00 0.00 2.29
1981 2069 2.757077 CCCGGGTGCTCCTTTTCT 59.243 61.111 14.18 0.00 0.00 2.52
1982 2070 1.074951 CCCGGGTGCTCCTTTTCTT 59.925 57.895 14.18 0.00 0.00 2.52
1983 2071 0.539669 CCCGGGTGCTCCTTTTCTTT 60.540 55.000 14.18 0.00 0.00 2.52
1984 2072 0.881796 CCGGGTGCTCCTTTTCTTTC 59.118 55.000 4.53 0.00 0.00 2.62
1985 2073 0.881796 CGGGTGCTCCTTTTCTTTCC 59.118 55.000 4.53 0.00 0.00 3.13
1986 2074 1.817740 CGGGTGCTCCTTTTCTTTCCA 60.818 52.381 4.53 0.00 0.00 3.53
1987 2075 2.529632 GGGTGCTCCTTTTCTTTCCAT 58.470 47.619 4.53 0.00 0.00 3.41
1988 2076 2.493675 GGGTGCTCCTTTTCTTTCCATC 59.506 50.000 4.53 0.00 0.00 3.51
1989 2077 3.157087 GGTGCTCCTTTTCTTTCCATCA 58.843 45.455 0.00 0.00 0.00 3.07
1990 2078 3.057245 GGTGCTCCTTTTCTTTCCATCAC 60.057 47.826 0.00 0.00 0.00 3.06
1991 2079 3.823304 GTGCTCCTTTTCTTTCCATCACT 59.177 43.478 0.00 0.00 0.00 3.41
1992 2080 4.074970 TGCTCCTTTTCTTTCCATCACTC 58.925 43.478 0.00 0.00 0.00 3.51
1993 2081 4.074970 GCTCCTTTTCTTTCCATCACTCA 58.925 43.478 0.00 0.00 0.00 3.41
1994 2082 4.704057 GCTCCTTTTCTTTCCATCACTCAT 59.296 41.667 0.00 0.00 0.00 2.90
1995 2083 5.184671 GCTCCTTTTCTTTCCATCACTCATT 59.815 40.000 0.00 0.00 0.00 2.57
1996 2084 6.624642 GCTCCTTTTCTTTCCATCACTCATTC 60.625 42.308 0.00 0.00 0.00 2.67
1997 2085 6.306199 TCCTTTTCTTTCCATCACTCATTCA 58.694 36.000 0.00 0.00 0.00 2.57
1998 2086 6.950041 TCCTTTTCTTTCCATCACTCATTCAT 59.050 34.615 0.00 0.00 0.00 2.57
1999 2087 7.452501 TCCTTTTCTTTCCATCACTCATTCATT 59.547 33.333 0.00 0.00 0.00 2.57
2000 2088 7.544566 CCTTTTCTTTCCATCACTCATTCATTG 59.455 37.037 0.00 0.00 0.00 2.82
2001 2089 5.571784 TCTTTCCATCACTCATTCATTGC 57.428 39.130 0.00 0.00 0.00 3.56
2002 2090 5.258841 TCTTTCCATCACTCATTCATTGCT 58.741 37.500 0.00 0.00 0.00 3.91
2003 2091 6.417258 TCTTTCCATCACTCATTCATTGCTA 58.583 36.000 0.00 0.00 0.00 3.49
2004 2092 6.317140 TCTTTCCATCACTCATTCATTGCTAC 59.683 38.462 0.00 0.00 0.00 3.58
2005 2093 5.363562 TCCATCACTCATTCATTGCTACT 57.636 39.130 0.00 0.00 0.00 2.57
2006 2094 6.484364 TCCATCACTCATTCATTGCTACTA 57.516 37.500 0.00 0.00 0.00 1.82
2007 2095 6.888105 TCCATCACTCATTCATTGCTACTAA 58.112 36.000 0.00 0.00 0.00 2.24
2008 2096 7.337938 TCCATCACTCATTCATTGCTACTAAA 58.662 34.615 0.00 0.00 0.00 1.85
2009 2097 7.828717 TCCATCACTCATTCATTGCTACTAAAA 59.171 33.333 0.00 0.00 0.00 1.52
2010 2098 8.627403 CCATCACTCATTCATTGCTACTAAAAT 58.373 33.333 0.00 0.00 0.00 1.82
2011 2099 9.447040 CATCACTCATTCATTGCTACTAAAATG 57.553 33.333 0.00 0.00 35.52 2.32
2012 2100 8.565896 TCACTCATTCATTGCTACTAAAATGT 57.434 30.769 0.00 0.00 35.66 2.71
2013 2101 9.665719 TCACTCATTCATTGCTACTAAAATGTA 57.334 29.630 0.00 0.00 35.66 2.29
2018 2106 9.443283 CATTCATTGCTACTAAAATGTAAGAGC 57.557 33.333 0.00 0.00 35.66 4.09
2019 2107 8.560355 TTCATTGCTACTAAAATGTAAGAGCA 57.440 30.769 0.00 0.00 35.66 4.26
2020 2108 8.737168 TCATTGCTACTAAAATGTAAGAGCAT 57.263 30.769 0.00 0.00 35.66 3.79
2021 2109 8.830580 TCATTGCTACTAAAATGTAAGAGCATC 58.169 33.333 0.00 0.00 35.66 3.91
2034 2122 2.138596 GAGCATCTCTAGCAGAGTGC 57.861 55.000 19.94 19.94 43.35 4.40
2065 2153 7.765695 AAAAATTATGAAGGCTTGAGAGACA 57.234 32.000 3.46 0.00 31.22 3.41
2066 2154 7.765695 AAAATTATGAAGGCTTGAGAGACAA 57.234 32.000 3.46 0.00 36.97 3.18
2067 2155 6.749923 AATTATGAAGGCTTGAGAGACAAC 57.250 37.500 3.46 0.00 34.56 3.32
2068 2156 5.489792 TTATGAAGGCTTGAGAGACAACT 57.510 39.130 3.46 0.00 34.56 3.16
2069 2157 3.393089 TGAAGGCTTGAGAGACAACTC 57.607 47.619 3.46 0.00 42.90 3.01
2070 2158 2.288457 TGAAGGCTTGAGAGACAACTCG 60.288 50.000 3.46 0.00 46.64 4.18
2071 2159 0.037790 AGGCTTGAGAGACAACTCGC 60.038 55.000 0.00 0.00 46.64 5.03
2090 2178 5.298197 TCGCAAGATCCGATTCTAGATAC 57.702 43.478 0.00 0.00 45.01 2.24
2091 2179 4.760204 TCGCAAGATCCGATTCTAGATACA 59.240 41.667 0.00 0.00 45.01 2.29
2092 2180 5.416013 TCGCAAGATCCGATTCTAGATACAT 59.584 40.000 0.00 0.00 45.01 2.29
2093 2181 5.514559 CGCAAGATCCGATTCTAGATACATG 59.485 44.000 0.00 0.00 43.02 3.21
2094 2182 6.393990 GCAAGATCCGATTCTAGATACATGT 58.606 40.000 2.69 2.69 0.00 3.21
2095 2183 6.870965 GCAAGATCCGATTCTAGATACATGTT 59.129 38.462 2.30 0.00 0.00 2.71
2096 2184 7.148672 GCAAGATCCGATTCTAGATACATGTTG 60.149 40.741 2.30 0.00 0.00 3.33
2097 2185 6.393990 AGATCCGATTCTAGATACATGTTGC 58.606 40.000 2.30 0.00 0.00 4.17
2098 2186 4.883083 TCCGATTCTAGATACATGTTGCC 58.117 43.478 2.30 0.00 0.00 4.52
2099 2187 4.588951 TCCGATTCTAGATACATGTTGCCT 59.411 41.667 2.30 1.50 0.00 4.75
2100 2188 4.926238 CCGATTCTAGATACATGTTGCCTC 59.074 45.833 2.30 0.00 0.00 4.70
2101 2189 4.926238 CGATTCTAGATACATGTTGCCTCC 59.074 45.833 2.30 0.00 0.00 4.30
2102 2190 5.509670 CGATTCTAGATACATGTTGCCTCCA 60.510 44.000 2.30 0.00 0.00 3.86
2103 2191 5.894298 TTCTAGATACATGTTGCCTCCAT 57.106 39.130 2.30 0.00 0.00 3.41
2104 2192 6.994421 TTCTAGATACATGTTGCCTCCATA 57.006 37.500 2.30 0.00 0.00 2.74
2105 2193 6.994421 TCTAGATACATGTTGCCTCCATAA 57.006 37.500 2.30 0.00 0.00 1.90
2106 2194 7.559335 TCTAGATACATGTTGCCTCCATAAT 57.441 36.000 2.30 0.00 0.00 1.28
2107 2195 7.615403 TCTAGATACATGTTGCCTCCATAATC 58.385 38.462 2.30 0.00 0.00 1.75
2108 2196 6.191657 AGATACATGTTGCCTCCATAATCA 57.808 37.500 2.30 0.00 0.00 2.57
2109 2197 6.000219 AGATACATGTTGCCTCCATAATCAC 59.000 40.000 2.30 0.00 0.00 3.06
2110 2198 3.966979 ACATGTTGCCTCCATAATCACA 58.033 40.909 0.00 0.00 0.00 3.58
2111 2199 3.696051 ACATGTTGCCTCCATAATCACAC 59.304 43.478 0.00 0.00 0.00 3.82
2112 2200 2.355197 TGTTGCCTCCATAATCACACG 58.645 47.619 0.00 0.00 0.00 4.49
2113 2201 2.027653 TGTTGCCTCCATAATCACACGA 60.028 45.455 0.00 0.00 0.00 4.35
2114 2202 2.309528 TGCCTCCATAATCACACGAC 57.690 50.000 0.00 0.00 0.00 4.34
2115 2203 1.134521 TGCCTCCATAATCACACGACC 60.135 52.381 0.00 0.00 0.00 4.79
2116 2204 1.139058 GCCTCCATAATCACACGACCT 59.861 52.381 0.00 0.00 0.00 3.85
2117 2205 2.364324 GCCTCCATAATCACACGACCTA 59.636 50.000 0.00 0.00 0.00 3.08
2118 2206 3.799232 GCCTCCATAATCACACGACCTAC 60.799 52.174 0.00 0.00 0.00 3.18
2119 2207 3.637229 CCTCCATAATCACACGACCTACT 59.363 47.826 0.00 0.00 0.00 2.57
2120 2208 4.261656 CCTCCATAATCACACGACCTACTC 60.262 50.000 0.00 0.00 0.00 2.59
2131 2219 3.054276 CGACCTACTCGTCAATGAGAC 57.946 52.381 6.24 0.00 44.02 3.36
2144 2232 5.714047 GTCAATGAGACATTCCTTTTTCCC 58.286 41.667 0.00 0.00 46.77 3.97
2145 2233 5.478332 GTCAATGAGACATTCCTTTTTCCCT 59.522 40.000 0.00 0.00 46.77 4.20
2146 2234 6.659242 GTCAATGAGACATTCCTTTTTCCCTA 59.341 38.462 0.00 0.00 46.77 3.53
2147 2235 7.340487 GTCAATGAGACATTCCTTTTTCCCTAT 59.660 37.037 0.00 0.00 46.77 2.57
2148 2236 7.895429 TCAATGAGACATTCCTTTTTCCCTATT 59.105 33.333 0.00 0.00 0.00 1.73
2149 2237 8.534496 CAATGAGACATTCCTTTTTCCCTATTT 58.466 33.333 0.00 0.00 0.00 1.40
2150 2238 8.670521 ATGAGACATTCCTTTTTCCCTATTTT 57.329 30.769 0.00 0.00 0.00 1.82
2151 2239 8.122472 TGAGACATTCCTTTTTCCCTATTTTC 57.878 34.615 0.00 0.00 0.00 2.29
2152 2240 7.950124 TGAGACATTCCTTTTTCCCTATTTTCT 59.050 33.333 0.00 0.00 0.00 2.52
2153 2241 8.354711 AGACATTCCTTTTTCCCTATTTTCTC 57.645 34.615 0.00 0.00 0.00 2.87
2154 2242 8.173412 AGACATTCCTTTTTCCCTATTTTCTCT 58.827 33.333 0.00 0.00 0.00 3.10
2155 2243 8.127150 ACATTCCTTTTTCCCTATTTTCTCTG 57.873 34.615 0.00 0.00 0.00 3.35
2156 2244 7.730332 ACATTCCTTTTTCCCTATTTTCTCTGT 59.270 33.333 0.00 0.00 0.00 3.41
2157 2245 7.761038 TTCCTTTTTCCCTATTTTCTCTGTC 57.239 36.000 0.00 0.00 0.00 3.51
2158 2246 6.848069 TCCTTTTTCCCTATTTTCTCTGTCA 58.152 36.000 0.00 0.00 0.00 3.58
2159 2247 7.470192 TCCTTTTTCCCTATTTTCTCTGTCAT 58.530 34.615 0.00 0.00 0.00 3.06
2160 2248 7.611855 TCCTTTTTCCCTATTTTCTCTGTCATC 59.388 37.037 0.00 0.00 0.00 2.92
2161 2249 7.613411 CCTTTTTCCCTATTTTCTCTGTCATCT 59.387 37.037 0.00 0.00 0.00 2.90
2162 2250 8.567285 TTTTTCCCTATTTTCTCTGTCATCTC 57.433 34.615 0.00 0.00 0.00 2.75
2163 2251 6.874278 TTCCCTATTTTCTCTGTCATCTCA 57.126 37.500 0.00 0.00 0.00 3.27
2164 2252 6.227298 TCCCTATTTTCTCTGTCATCTCAC 57.773 41.667 0.00 0.00 0.00 3.51
2165 2253 5.046529 CCCTATTTTCTCTGTCATCTCACG 58.953 45.833 0.00 0.00 0.00 4.35
2166 2254 5.394663 CCCTATTTTCTCTGTCATCTCACGT 60.395 44.000 0.00 0.00 0.00 4.49
2167 2255 5.518128 CCTATTTTCTCTGTCATCTCACGTG 59.482 44.000 9.94 9.94 0.00 4.49
2168 2256 4.584327 TTTTCTCTGTCATCTCACGTGA 57.416 40.909 18.88 18.88 0.00 4.35
2169 2257 3.839051 TTCTCTGTCATCTCACGTGAG 57.161 47.619 34.76 34.76 43.36 3.51
2170 2258 2.087646 TCTCTGTCATCTCACGTGAGG 58.912 52.381 37.82 25.83 42.30 3.86
2171 2259 1.815613 CTCTGTCATCTCACGTGAGGT 59.184 52.381 37.82 32.40 42.30 3.85
2174 2262 4.919653 CATCTCACGTGAGGTGGG 57.080 61.111 39.51 22.87 46.72 4.61
2177 2265 2.923035 CTCACGTGAGGTGGGGGT 60.923 66.667 33.36 0.00 43.80 4.95
2178 2266 2.920912 TCACGTGAGGTGGGGGTC 60.921 66.667 15.76 0.00 46.96 4.46
2179 2267 3.238497 CACGTGAGGTGGGGGTCA 61.238 66.667 10.90 0.00 43.16 4.02
2180 2268 3.239253 ACGTGAGGTGGGGGTCAC 61.239 66.667 0.00 0.00 45.34 3.67
2187 2275 3.576232 GTGGGGGTCACCTGAAGT 58.424 61.111 0.00 0.00 40.39 3.01
2188 2276 1.844130 GTGGGGGTCACCTGAAGTT 59.156 57.895 0.00 0.00 40.39 2.66
2189 2277 0.185175 GTGGGGGTCACCTGAAGTTT 59.815 55.000 0.00 0.00 40.39 2.66
2190 2278 0.184933 TGGGGGTCACCTGAAGTTTG 59.815 55.000 0.00 0.00 40.03 2.93
2191 2279 1.179174 GGGGGTCACCTGAAGTTTGC 61.179 60.000 0.00 0.00 40.03 3.68
2192 2280 0.178990 GGGGTCACCTGAAGTTTGCT 60.179 55.000 0.00 0.00 36.80 3.91
2193 2281 1.692411 GGGTCACCTGAAGTTTGCTT 58.308 50.000 0.00 0.00 37.71 3.91
2200 2288 2.637025 GAAGTTTGCTTCGCGCCA 59.363 55.556 0.00 0.00 41.27 5.69
2201 2289 1.725973 GAAGTTTGCTTCGCGCCAC 60.726 57.895 0.00 0.00 41.27 5.01
2202 2290 2.387125 GAAGTTTGCTTCGCGCCACA 62.387 55.000 0.00 0.00 41.27 4.17
2203 2291 1.795170 AAGTTTGCTTCGCGCCACAT 61.795 50.000 0.00 0.00 38.05 3.21
2204 2292 0.953471 AGTTTGCTTCGCGCCACATA 60.953 50.000 0.00 0.00 38.05 2.29
2205 2293 0.109964 GTTTGCTTCGCGCCACATAA 60.110 50.000 0.00 0.00 38.05 1.90
2206 2294 0.593618 TTTGCTTCGCGCCACATAAA 59.406 45.000 0.00 0.00 38.05 1.40
2207 2295 0.593618 TTGCTTCGCGCCACATAAAA 59.406 45.000 0.00 0.00 38.05 1.52
2208 2296 0.808125 TGCTTCGCGCCACATAAAAT 59.192 45.000 0.00 0.00 38.05 1.82
2209 2297 1.201181 TGCTTCGCGCCACATAAAATT 59.799 42.857 0.00 0.00 38.05 1.82
2210 2298 2.420372 TGCTTCGCGCCACATAAAATTA 59.580 40.909 0.00 0.00 38.05 1.40
2211 2299 3.066064 TGCTTCGCGCCACATAAAATTAT 59.934 39.130 0.00 0.00 38.05 1.28
2212 2300 3.421888 GCTTCGCGCCACATAAAATTATG 59.578 43.478 0.00 10.79 44.66 1.90
2213 2301 2.993545 TCGCGCCACATAAAATTATGC 58.006 42.857 0.00 0.00 43.30 3.14
2214 2302 2.356069 TCGCGCCACATAAAATTATGCA 59.644 40.909 0.00 0.00 43.30 3.96
2215 2303 3.004210 TCGCGCCACATAAAATTATGCAT 59.996 39.130 3.79 3.79 43.30 3.96
2216 2304 4.214332 TCGCGCCACATAAAATTATGCATA 59.786 37.500 0.00 1.16 43.30 3.14
2217 2305 4.554586 CGCGCCACATAAAATTATGCATAG 59.445 41.667 6.50 0.00 43.30 2.23
2218 2306 4.324402 GCGCCACATAAAATTATGCATAGC 59.676 41.667 6.50 9.61 43.30 2.97
2219 2307 5.702865 CGCCACATAAAATTATGCATAGCT 58.297 37.500 6.50 0.00 43.30 3.32
2220 2308 5.570206 CGCCACATAAAATTATGCATAGCTG 59.430 40.000 6.50 2.84 43.30 4.24
2232 2320 2.897436 GCATAGCTGCCATATGATCGA 58.103 47.619 3.65 0.00 42.88 3.59
2233 2321 2.864946 GCATAGCTGCCATATGATCGAG 59.135 50.000 3.65 0.00 42.88 4.04
2234 2322 2.662006 TAGCTGCCATATGATCGAGC 57.338 50.000 3.65 5.78 0.00 5.03
2235 2323 0.683412 AGCTGCCATATGATCGAGCA 59.317 50.000 5.53 5.53 0.00 4.26
2236 2324 0.795085 GCTGCCATATGATCGAGCAC 59.205 55.000 5.03 0.00 0.00 4.40
2237 2325 1.436600 CTGCCATATGATCGAGCACC 58.563 55.000 5.03 0.00 0.00 5.01
2238 2326 0.758123 TGCCATATGATCGAGCACCA 59.242 50.000 5.03 0.00 0.00 4.17
2239 2327 1.140652 TGCCATATGATCGAGCACCAA 59.859 47.619 5.03 0.00 0.00 3.67
2240 2328 2.221169 GCCATATGATCGAGCACCAAA 58.779 47.619 5.03 0.00 0.00 3.28
2241 2329 2.618241 GCCATATGATCGAGCACCAAAA 59.382 45.455 5.03 0.00 0.00 2.44
2242 2330 3.066621 GCCATATGATCGAGCACCAAAAA 59.933 43.478 5.03 0.00 0.00 1.94
2243 2331 4.790766 GCCATATGATCGAGCACCAAAAAG 60.791 45.833 5.03 0.00 0.00 2.27
2244 2332 2.927553 ATGATCGAGCACCAAAAAGC 57.072 45.000 5.03 0.00 0.00 3.51
2245 2333 1.603456 TGATCGAGCACCAAAAAGCA 58.397 45.000 0.00 0.00 0.00 3.91
2246 2334 1.536766 TGATCGAGCACCAAAAAGCAG 59.463 47.619 0.00 0.00 0.00 4.24
2247 2335 0.242017 ATCGAGCACCAAAAAGCAGC 59.758 50.000 0.00 0.00 0.00 5.25
2248 2336 0.819259 TCGAGCACCAAAAAGCAGCT 60.819 50.000 0.00 0.00 38.43 4.24
2249 2337 0.874390 CGAGCACCAAAAAGCAGCTA 59.126 50.000 0.00 0.00 35.36 3.32
2250 2338 1.470098 CGAGCACCAAAAAGCAGCTAT 59.530 47.619 0.00 0.00 35.36 2.97
2251 2339 2.730090 CGAGCACCAAAAAGCAGCTATG 60.730 50.000 0.00 0.00 35.36 2.23
2252 2340 2.489329 GAGCACCAAAAAGCAGCTATGA 59.511 45.455 0.00 0.00 35.36 2.15
2253 2341 2.490903 AGCACCAAAAAGCAGCTATGAG 59.509 45.455 0.00 0.00 33.06 2.90
2254 2342 2.489329 GCACCAAAAAGCAGCTATGAGA 59.511 45.455 0.00 0.00 0.00 3.27
2255 2343 3.671702 GCACCAAAAAGCAGCTATGAGAC 60.672 47.826 0.00 0.00 0.00 3.36
2256 2344 2.744202 ACCAAAAAGCAGCTATGAGACG 59.256 45.455 0.00 0.00 0.00 4.18
2257 2345 3.002791 CCAAAAAGCAGCTATGAGACGA 58.997 45.455 0.00 0.00 0.00 4.20
2258 2346 3.063180 CCAAAAAGCAGCTATGAGACGAG 59.937 47.826 0.00 0.00 0.00 4.18
2259 2347 3.601443 AAAAGCAGCTATGAGACGAGT 57.399 42.857 0.00 0.00 0.00 4.18
2260 2348 2.575694 AAGCAGCTATGAGACGAGTG 57.424 50.000 0.00 0.00 0.00 3.51
2261 2349 0.102120 AGCAGCTATGAGACGAGTGC 59.898 55.000 0.00 0.00 0.00 4.40
2262 2350 1.205485 GCAGCTATGAGACGAGTGCG 61.205 60.000 0.00 0.00 44.79 5.34
2263 2351 0.378610 CAGCTATGAGACGAGTGCGA 59.621 55.000 0.00 0.00 41.64 5.10
2264 2352 1.095600 AGCTATGAGACGAGTGCGAA 58.904 50.000 0.00 0.00 41.64 4.70
2265 2353 1.678627 AGCTATGAGACGAGTGCGAAT 59.321 47.619 0.00 0.00 41.64 3.34
2266 2354 2.099921 AGCTATGAGACGAGTGCGAATT 59.900 45.455 0.00 0.00 41.64 2.17
2267 2355 2.860735 GCTATGAGACGAGTGCGAATTT 59.139 45.455 0.00 0.00 41.64 1.82
2268 2356 3.302092 GCTATGAGACGAGTGCGAATTTG 60.302 47.826 0.00 0.00 41.64 2.32
2269 2357 0.790207 TGAGACGAGTGCGAATTTGC 59.210 50.000 10.99 10.99 41.64 3.68
2270 2358 0.790207 GAGACGAGTGCGAATTTGCA 59.210 50.000 16.65 16.65 43.95 4.08
2276 2364 2.650196 TGCGAATTTGCAGCACCC 59.350 55.556 16.65 0.00 40.62 4.61
2277 2365 2.504681 GCGAATTTGCAGCACCCG 60.505 61.111 13.04 0.00 34.15 5.28
2278 2366 2.976840 GCGAATTTGCAGCACCCGA 61.977 57.895 13.04 0.00 34.15 5.14
2279 2367 1.135315 CGAATTTGCAGCACCCGAG 59.865 57.895 0.00 0.00 0.00 4.63
2280 2368 1.153958 GAATTTGCAGCACCCGAGC 60.154 57.895 0.00 0.00 0.00 5.03
2282 2370 1.589716 AATTTGCAGCACCCGAGCTC 61.590 55.000 2.73 2.73 44.54 4.09
2283 2371 4.704833 TTGCAGCACCCGAGCTCC 62.705 66.667 8.47 0.00 44.54 4.70
2285 2373 4.479993 GCAGCACCCGAGCTCCAT 62.480 66.667 8.47 0.00 44.54 3.41
2286 2374 2.270205 CAGCACCCGAGCTCCATT 59.730 61.111 8.47 0.00 44.54 3.16
2287 2375 2.110967 CAGCACCCGAGCTCCATTG 61.111 63.158 8.47 3.42 44.54 2.82
2288 2376 3.512516 GCACCCGAGCTCCATTGC 61.513 66.667 8.47 10.10 0.00 3.56
2299 2387 4.500499 AGCTCCATTGCTCTCTATGTTT 57.500 40.909 0.00 0.00 39.34 2.83
2300 2388 4.197750 AGCTCCATTGCTCTCTATGTTTG 58.802 43.478 0.00 0.00 39.34 2.93
2301 2389 4.080695 AGCTCCATTGCTCTCTATGTTTGA 60.081 41.667 0.00 0.00 39.34 2.69
2302 2390 4.637534 GCTCCATTGCTCTCTATGTTTGAA 59.362 41.667 0.00 0.00 0.00 2.69
2303 2391 5.448360 GCTCCATTGCTCTCTATGTTTGAAC 60.448 44.000 0.00 0.00 0.00 3.18
2304 2392 5.559770 TCCATTGCTCTCTATGTTTGAACA 58.440 37.500 0.00 0.00 44.06 3.18
2306 2394 6.660521 TCCATTGCTCTCTATGTTTGAACATT 59.339 34.615 13.94 0.56 46.95 2.71
2307 2395 7.177216 TCCATTGCTCTCTATGTTTGAACATTT 59.823 33.333 13.94 0.00 46.95 2.32
2308 2396 7.816031 CCATTGCTCTCTATGTTTGAACATTTT 59.184 33.333 13.94 0.00 46.95 1.82
2309 2397 9.844790 CATTGCTCTCTATGTTTGAACATTTTA 57.155 29.630 13.94 0.00 46.95 1.52
2368 2456 5.878406 TTTTTGGGGATACAAACACACAT 57.122 34.783 0.00 0.00 39.82 3.21
2369 2457 5.878406 TTTTGGGGATACAAACACACATT 57.122 34.783 0.00 0.00 39.82 2.71
2370 2458 5.878406 TTTGGGGATACAAACACACATTT 57.122 34.783 0.00 0.00 35.57 2.32
2371 2459 5.878406 TTGGGGATACAAACACACATTTT 57.122 34.783 0.00 0.00 39.74 1.82
2372 2460 5.207110 TGGGGATACAAACACACATTTTG 57.793 39.130 0.00 0.00 39.44 2.44
2373 2461 4.895889 TGGGGATACAAACACACATTTTGA 59.104 37.500 1.97 0.00 37.39 2.69
2374 2462 5.363868 TGGGGATACAAACACACATTTTGAA 59.636 36.000 1.97 0.00 37.39 2.69
2375 2463 6.042552 TGGGGATACAAACACACATTTTGAAT 59.957 34.615 1.97 0.00 37.39 2.57
2376 2464 7.233553 TGGGGATACAAACACACATTTTGAATA 59.766 33.333 1.97 0.00 37.39 1.75
2377 2465 7.544217 GGGGATACAAACACACATTTTGAATAC 59.456 37.037 1.97 0.00 37.39 1.89
2378 2466 7.544217 GGGATACAAACACACATTTTGAATACC 59.456 37.037 1.97 0.00 37.39 2.73
2379 2467 7.544217 GGATACAAACACACATTTTGAATACCC 59.456 37.037 1.97 0.00 37.39 3.69
2380 2468 5.285651 ACAAACACACATTTTGAATACCCG 58.714 37.500 1.97 0.00 37.39 5.28
2381 2469 5.163499 ACAAACACACATTTTGAATACCCGT 60.163 36.000 1.97 0.00 37.39 5.28
2382 2470 4.497473 ACACACATTTTGAATACCCGTG 57.503 40.909 0.00 0.00 0.00 4.94
2383 2471 3.254657 ACACACATTTTGAATACCCGTGG 59.745 43.478 0.00 0.00 0.00 4.94
2384 2472 2.230266 ACACATTTTGAATACCCGTGGC 59.770 45.455 0.00 0.00 0.00 5.01
2385 2473 2.230025 CACATTTTGAATACCCGTGGCA 59.770 45.455 0.00 0.00 0.00 4.92
2386 2474 3.096092 ACATTTTGAATACCCGTGGCAT 58.904 40.909 0.00 0.00 0.00 4.40
2387 2475 3.119173 ACATTTTGAATACCCGTGGCATG 60.119 43.478 0.00 0.00 0.00 4.06
2388 2476 2.208132 TTTGAATACCCGTGGCATGT 57.792 45.000 5.89 0.00 0.00 3.21
2389 2477 2.208132 TTGAATACCCGTGGCATGTT 57.792 45.000 5.89 0.00 0.00 2.71
2390 2478 2.208132 TGAATACCCGTGGCATGTTT 57.792 45.000 5.89 0.00 0.00 2.83
2391 2479 3.351794 TGAATACCCGTGGCATGTTTA 57.648 42.857 5.89 0.00 0.00 2.01
2392 2480 3.892284 TGAATACCCGTGGCATGTTTAT 58.108 40.909 5.89 0.00 0.00 1.40
2393 2481 3.629855 TGAATACCCGTGGCATGTTTATG 59.370 43.478 5.89 0.00 37.36 1.90
2394 2482 2.791347 TACCCGTGGCATGTTTATGT 57.209 45.000 5.89 0.00 36.65 2.29
2395 2483 2.791347 ACCCGTGGCATGTTTATGTA 57.209 45.000 5.89 0.00 36.65 2.29
2396 2484 2.639065 ACCCGTGGCATGTTTATGTAG 58.361 47.619 5.89 0.00 36.65 2.74
2397 2485 2.237643 ACCCGTGGCATGTTTATGTAGA 59.762 45.455 5.89 0.00 36.65 2.59
2398 2486 3.275143 CCCGTGGCATGTTTATGTAGAA 58.725 45.455 5.89 0.00 36.65 2.10
2399 2487 3.692101 CCCGTGGCATGTTTATGTAGAAA 59.308 43.478 5.89 0.00 36.65 2.52
2400 2488 4.338118 CCCGTGGCATGTTTATGTAGAAAT 59.662 41.667 5.89 0.00 36.65 2.17
2401 2489 5.505654 CCCGTGGCATGTTTATGTAGAAATC 60.506 44.000 5.89 0.00 36.65 2.17
2402 2490 5.296780 CCGTGGCATGTTTATGTAGAAATCT 59.703 40.000 5.89 0.00 36.65 2.40
2403 2491 6.183360 CCGTGGCATGTTTATGTAGAAATCTT 60.183 38.462 5.89 0.00 36.65 2.40
2404 2492 6.688385 CGTGGCATGTTTATGTAGAAATCTTG 59.312 38.462 0.00 0.00 36.65 3.02
2405 2493 7.538575 GTGGCATGTTTATGTAGAAATCTTGT 58.461 34.615 0.00 0.00 36.65 3.16
2406 2494 8.028938 GTGGCATGTTTATGTAGAAATCTTGTT 58.971 33.333 0.00 0.00 36.65 2.83
2407 2495 8.584157 TGGCATGTTTATGTAGAAATCTTGTTT 58.416 29.630 0.00 0.00 36.65 2.83
2408 2496 9.423061 GGCATGTTTATGTAGAAATCTTGTTTT 57.577 29.630 0.00 0.00 36.65 2.43
2416 2504 6.961576 TGTAGAAATCTTGTTTTGTTACGGG 58.038 36.000 0.00 0.00 0.00 5.28
2417 2505 4.866921 AGAAATCTTGTTTTGTTACGGGC 58.133 39.130 0.00 0.00 0.00 6.13
2418 2506 4.583073 AGAAATCTTGTTTTGTTACGGGCT 59.417 37.500 0.00 0.00 0.00 5.19
2419 2507 5.766174 AGAAATCTTGTTTTGTTACGGGCTA 59.234 36.000 0.00 0.00 0.00 3.93
2420 2508 6.433093 AGAAATCTTGTTTTGTTACGGGCTAT 59.567 34.615 0.00 0.00 0.00 2.97
2421 2509 7.608761 AGAAATCTTGTTTTGTTACGGGCTATA 59.391 33.333 0.00 0.00 0.00 1.31
2422 2510 6.920569 ATCTTGTTTTGTTACGGGCTATAG 57.079 37.500 0.00 0.00 0.00 1.31
2423 2511 6.040209 TCTTGTTTTGTTACGGGCTATAGA 57.960 37.500 3.21 0.00 0.00 1.98
2424 2512 6.465948 TCTTGTTTTGTTACGGGCTATAGAA 58.534 36.000 3.21 0.00 0.00 2.10
2425 2513 6.935771 TCTTGTTTTGTTACGGGCTATAGAAA 59.064 34.615 3.21 0.00 0.00 2.52
2426 2514 7.444792 TCTTGTTTTGTTACGGGCTATAGAAAA 59.555 33.333 3.21 0.00 0.00 2.29
2427 2515 7.507733 TGTTTTGTTACGGGCTATAGAAAAA 57.492 32.000 3.21 0.00 0.00 1.94
2456 2544 9.905713 AAAGCAAATTTCTGACAGTATATAGGA 57.094 29.630 1.59 0.00 0.00 2.94
2457 2545 9.553064 AAGCAAATTTCTGACAGTATATAGGAG 57.447 33.333 1.59 0.00 0.00 3.69
2458 2546 8.928448 AGCAAATTTCTGACAGTATATAGGAGA 58.072 33.333 1.59 0.00 0.00 3.71
2459 2547 9.547753 GCAAATTTCTGACAGTATATAGGAGAA 57.452 33.333 1.59 0.00 0.00 2.87
2465 2553 8.251383 TCTGACAGTATATAGGAGAAAAAGGG 57.749 38.462 1.59 0.00 0.00 3.95
2466 2554 7.844779 TCTGACAGTATATAGGAGAAAAAGGGT 59.155 37.037 1.59 0.00 0.00 4.34
2467 2555 7.792032 TGACAGTATATAGGAGAAAAAGGGTG 58.208 38.462 0.00 0.00 0.00 4.61
2468 2556 6.592870 ACAGTATATAGGAGAAAAAGGGTGC 58.407 40.000 0.00 0.00 0.00 5.01
2469 2557 5.998363 CAGTATATAGGAGAAAAAGGGTGCC 59.002 44.000 0.00 0.00 0.00 5.01
2470 2558 5.670361 AGTATATAGGAGAAAAAGGGTGCCA 59.330 40.000 0.00 0.00 0.00 4.92
2471 2559 5.669798 ATATAGGAGAAAAAGGGTGCCAT 57.330 39.130 0.00 0.00 0.00 4.40
2472 2560 2.702270 AGGAGAAAAAGGGTGCCATT 57.298 45.000 0.00 0.00 0.00 3.16
2473 2561 2.976440 AGGAGAAAAAGGGTGCCATTT 58.024 42.857 0.00 0.00 0.00 2.32
2474 2562 2.899900 AGGAGAAAAAGGGTGCCATTTC 59.100 45.455 1.18 3.90 34.22 2.17
2475 2563 2.028112 GGAGAAAAAGGGTGCCATTTCC 60.028 50.000 1.18 0.00 34.41 3.13
2476 2564 1.618343 AGAAAAAGGGTGCCATTTCCG 59.382 47.619 1.18 0.00 34.41 4.30
2477 2565 1.343142 GAAAAAGGGTGCCATTTCCGT 59.657 47.619 1.18 0.00 30.57 4.69
2478 2566 0.966179 AAAAGGGTGCCATTTCCGTC 59.034 50.000 1.18 0.00 0.00 4.79
2479 2567 0.178975 AAAGGGTGCCATTTCCGTCA 60.179 50.000 0.00 0.00 0.00 4.35
2480 2568 0.609131 AAGGGTGCCATTTCCGTCAG 60.609 55.000 0.00 0.00 0.00 3.51
2481 2569 1.002624 GGGTGCCATTTCCGTCAGA 60.003 57.895 0.00 0.00 0.00 3.27
2482 2570 0.608035 GGGTGCCATTTCCGTCAGAA 60.608 55.000 0.00 0.00 0.00 3.02
2495 2583 7.985634 TTTCCGTCAGAAATTTCTCTTTTTG 57.014 32.000 17.91 7.09 39.60 2.44
2496 2584 6.693315 TCCGTCAGAAATTTCTCTTTTTGT 57.307 33.333 17.91 0.00 34.74 2.83
2497 2585 7.795482 TCCGTCAGAAATTTCTCTTTTTGTA 57.205 32.000 17.91 0.00 34.74 2.41
2498 2586 7.636326 TCCGTCAGAAATTTCTCTTTTTGTAC 58.364 34.615 17.91 6.57 34.74 2.90
2499 2587 7.497909 TCCGTCAGAAATTTCTCTTTTTGTACT 59.502 33.333 17.91 0.00 34.74 2.73
2500 2588 8.129211 CCGTCAGAAATTTCTCTTTTTGTACTT 58.871 33.333 17.91 0.00 34.74 2.24
2501 2589 9.159470 CGTCAGAAATTTCTCTTTTTGTACTTC 57.841 33.333 17.91 0.00 34.74 3.01
2502 2590 9.452065 GTCAGAAATTTCTCTTTTTGTACTTCC 57.548 33.333 17.91 0.00 34.74 3.46
2503 2591 8.630037 TCAGAAATTTCTCTTTTTGTACTTCCC 58.370 33.333 17.91 0.00 34.74 3.97
2504 2592 8.413229 CAGAAATTTCTCTTTTTGTACTTCCCA 58.587 33.333 17.91 0.00 34.74 4.37
2505 2593 8.977412 AGAAATTTCTCTTTTTGTACTTCCCAA 58.023 29.630 15.11 0.00 29.94 4.12
2506 2594 9.594478 GAAATTTCTCTTTTTGTACTTCCCAAA 57.406 29.630 11.05 0.00 0.00 3.28
2507 2595 9.952030 AAATTTCTCTTTTTGTACTTCCCAAAA 57.048 25.926 0.00 0.00 39.36 2.44
2508 2596 8.942338 ATTTCTCTTTTTGTACTTCCCAAAAC 57.058 30.769 0.00 0.00 40.44 2.43
2509 2597 6.126568 TCTCTTTTTGTACTTCCCAAAACG 57.873 37.500 0.00 0.00 40.44 3.60
2510 2598 4.674475 TCTTTTTGTACTTCCCAAAACGC 58.326 39.130 0.00 0.00 40.44 4.84
2511 2599 4.158025 TCTTTTTGTACTTCCCAAAACGCA 59.842 37.500 0.00 0.00 40.44 5.24
2512 2600 4.451629 TTTTGTACTTCCCAAAACGCAA 57.548 36.364 0.00 0.00 36.99 4.85
2513 2601 4.451629 TTTGTACTTCCCAAAACGCAAA 57.548 36.364 0.00 0.00 0.00 3.68
2514 2602 3.701532 TGTACTTCCCAAAACGCAAAG 57.298 42.857 0.00 0.00 0.00 2.77
2515 2603 3.018149 TGTACTTCCCAAAACGCAAAGT 58.982 40.909 0.00 0.00 34.70 2.66
2516 2604 4.197750 TGTACTTCCCAAAACGCAAAGTA 58.802 39.130 0.00 0.00 32.71 2.24
2517 2605 4.822896 TGTACTTCCCAAAACGCAAAGTAT 59.177 37.500 0.00 0.00 35.54 2.12
2518 2606 4.929819 ACTTCCCAAAACGCAAAGTATT 57.070 36.364 0.00 0.00 0.00 1.89
2519 2607 5.270893 ACTTCCCAAAACGCAAAGTATTT 57.729 34.783 0.00 0.00 40.26 1.40
2520 2608 5.286438 ACTTCCCAAAACGCAAAGTATTTC 58.714 37.500 0.00 0.00 35.03 2.17
2521 2609 5.068591 ACTTCCCAAAACGCAAAGTATTTCT 59.931 36.000 0.00 0.00 35.03 2.52
2522 2610 5.523438 TCCCAAAACGCAAAGTATTTCTT 57.477 34.783 0.00 0.00 35.03 2.52
2523 2611 5.908341 TCCCAAAACGCAAAGTATTTCTTT 58.092 33.333 0.00 0.00 45.96 2.52
2524 2612 6.342111 TCCCAAAACGCAAAGTATTTCTTTT 58.658 32.000 0.00 0.00 42.95 2.27
2525 2613 6.477360 TCCCAAAACGCAAAGTATTTCTTTTC 59.523 34.615 0.00 0.00 42.95 2.29
2526 2614 6.292649 CCCAAAACGCAAAGTATTTCTTTTCC 60.293 38.462 0.00 0.00 42.95 3.13
2527 2615 6.256757 CCAAAACGCAAAGTATTTCTTTTCCA 59.743 34.615 0.00 0.00 42.95 3.53
2528 2616 7.042119 CCAAAACGCAAAGTATTTCTTTTCCAT 60.042 33.333 0.00 0.00 42.95 3.41
2529 2617 8.973378 CAAAACGCAAAGTATTTCTTTTCCATA 58.027 29.630 0.00 0.00 42.95 2.74
2530 2618 9.705290 AAAACGCAAAGTATTTCTTTTCCATAT 57.295 25.926 0.00 0.00 42.95 1.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 2.528813 TCTATTCCCCATTCCCCTCTCT 59.471 50.000 0.00 0.00 0.00 3.10
184 217 0.326927 CCGTTGTGTACCCCCAATCT 59.673 55.000 0.00 0.00 0.00 2.40
325 375 0.033503 TACCTGGCAGATCGACCTCA 60.034 55.000 17.94 0.00 0.00 3.86
463 516 1.192146 TTGCTGGGCTCCTAACGACT 61.192 55.000 0.00 0.00 0.00 4.18
467 520 2.424956 CAAGAATTGCTGGGCTCCTAAC 59.575 50.000 0.00 0.00 40.39 2.34
482 535 5.568620 AGAAGTGGTCCAAGTACAAGAAT 57.431 39.130 0.00 0.00 0.00 2.40
604 657 2.113986 GGGCCACTGCACAAGAGT 59.886 61.111 4.39 0.00 41.97 3.24
628 681 1.833630 AGAAGGAATCTGATGCGGTGA 59.166 47.619 0.00 0.00 36.88 4.02
863 923 3.306780 CCACCGCCCCTATATTTACTCAG 60.307 52.174 0.00 0.00 0.00 3.35
882 942 3.322254 TGTCACTCTTCTCTTCCTTCCAC 59.678 47.826 0.00 0.00 0.00 4.02
1044 1107 1.620259 GGGCATTGGATGAAGGGGA 59.380 57.895 0.00 0.00 0.00 4.81
1211 1280 1.068333 CAAACTTCGGTGCAAGGATGG 60.068 52.381 0.00 0.00 0.00 3.51
1228 1297 2.507909 GGGCATGGGAATGCACTCAAA 61.508 52.381 12.36 0.00 46.85 2.69
1239 1308 2.204291 AAGTCCAGGGGCATGGGA 60.204 61.111 7.99 0.00 41.01 4.37
1286 1355 3.883489 AGTGTTGTTCCTAAGCTTGAACC 59.117 43.478 20.82 11.05 40.06 3.62
1296 1365 0.764890 AGCAGCCAGTGTTGTTCCTA 59.235 50.000 0.00 0.00 0.00 2.94
1338 1407 0.323087 GGGTTACCCTGCCGTTCATT 60.323 55.000 14.22 0.00 41.34 2.57
1362 1431 1.543896 ATAGGTGGCCCAACCCTGT 60.544 57.895 8.63 0.35 41.54 4.00
1380 1449 0.249955 TGATCTGATGAACGGCTGCA 59.750 50.000 0.50 0.00 0.00 4.41
1583 1665 6.795098 TCATAACAGTTCAACGCATAAACT 57.205 33.333 0.00 0.00 33.63 2.66
1629 1717 5.942872 AGCATCAACTACTTAACAACATGC 58.057 37.500 0.00 0.00 35.41 4.06
1630 1718 7.095060 ACAGAGCATCAACTACTTAACAACATG 60.095 37.037 0.00 0.00 37.82 3.21
1788 1876 0.109132 GGTTGCCTGCATGTTAGTGC 60.109 55.000 0.00 0.90 45.25 4.40
1830 1918 1.380785 CCCTCTTGCATGCATGGGT 60.381 57.895 30.30 0.00 31.42 4.51
1839 1927 2.361992 CCTGCATGCCCTCTTGCA 60.362 61.111 16.68 5.87 46.78 4.08
1903 1991 2.711547 AGCCTTCTCAACTTAACCTGGT 59.288 45.455 0.00 0.00 0.00 4.00
1968 2056 3.057245 GTGATGGAAAGAAAAGGAGCACC 60.057 47.826 0.00 0.00 0.00 5.01
1969 2057 3.823304 AGTGATGGAAAGAAAAGGAGCAC 59.177 43.478 0.00 0.00 0.00 4.40
1970 2058 4.074970 GAGTGATGGAAAGAAAAGGAGCA 58.925 43.478 0.00 0.00 0.00 4.26
1971 2059 4.074970 TGAGTGATGGAAAGAAAAGGAGC 58.925 43.478 0.00 0.00 0.00 4.70
1972 2060 6.432162 TGAATGAGTGATGGAAAGAAAAGGAG 59.568 38.462 0.00 0.00 0.00 3.69
1973 2061 6.306199 TGAATGAGTGATGGAAAGAAAAGGA 58.694 36.000 0.00 0.00 0.00 3.36
1974 2062 6.579666 TGAATGAGTGATGGAAAGAAAAGG 57.420 37.500 0.00 0.00 0.00 3.11
1975 2063 7.063074 GCAATGAATGAGTGATGGAAAGAAAAG 59.937 37.037 0.00 0.00 0.00 2.27
1976 2064 6.869913 GCAATGAATGAGTGATGGAAAGAAAA 59.130 34.615 0.00 0.00 0.00 2.29
1977 2065 6.209986 AGCAATGAATGAGTGATGGAAAGAAA 59.790 34.615 0.00 0.00 0.00 2.52
1978 2066 5.713389 AGCAATGAATGAGTGATGGAAAGAA 59.287 36.000 0.00 0.00 0.00 2.52
1979 2067 5.258841 AGCAATGAATGAGTGATGGAAAGA 58.741 37.500 0.00 0.00 0.00 2.52
1980 2068 5.578005 AGCAATGAATGAGTGATGGAAAG 57.422 39.130 0.00 0.00 0.00 2.62
1981 2069 6.182627 AGTAGCAATGAATGAGTGATGGAAA 58.817 36.000 0.00 0.00 0.00 3.13
1982 2070 5.748402 AGTAGCAATGAATGAGTGATGGAA 58.252 37.500 0.00 0.00 0.00 3.53
1983 2071 5.363562 AGTAGCAATGAATGAGTGATGGA 57.636 39.130 0.00 0.00 0.00 3.41
1984 2072 7.558161 TTTAGTAGCAATGAATGAGTGATGG 57.442 36.000 0.00 0.00 0.00 3.51
1985 2073 9.447040 CATTTTAGTAGCAATGAATGAGTGATG 57.553 33.333 0.00 0.00 32.91 3.07
1986 2074 9.182214 ACATTTTAGTAGCAATGAATGAGTGAT 57.818 29.630 9.90 0.00 34.89 3.06
1987 2075 8.565896 ACATTTTAGTAGCAATGAATGAGTGA 57.434 30.769 9.90 0.00 34.89 3.41
1992 2080 9.443283 GCTCTTACATTTTAGTAGCAATGAATG 57.557 33.333 9.90 0.00 34.89 2.67
1993 2081 9.177608 TGCTCTTACATTTTAGTAGCAATGAAT 57.822 29.630 9.90 0.00 34.89 2.57
1994 2082 8.560355 TGCTCTTACATTTTAGTAGCAATGAA 57.440 30.769 9.90 2.39 34.89 2.57
1995 2083 8.737168 ATGCTCTTACATTTTAGTAGCAATGA 57.263 30.769 9.90 0.00 34.89 2.57
1996 2084 8.834465 AGATGCTCTTACATTTTAGTAGCAATG 58.166 33.333 0.00 3.63 36.59 2.82
1997 2085 8.970859 AGATGCTCTTACATTTTAGTAGCAAT 57.029 30.769 0.00 0.00 30.03 3.56
1998 2086 8.260818 AGAGATGCTCTTACATTTTAGTAGCAA 58.739 33.333 0.00 0.00 37.60 3.91
1999 2087 7.786030 AGAGATGCTCTTACATTTTAGTAGCA 58.214 34.615 0.00 0.00 37.60 3.49
2000 2088 9.405587 CTAGAGATGCTCTTACATTTTAGTAGC 57.594 37.037 1.88 0.00 41.50 3.58
2001 2089 9.405587 GCTAGAGATGCTCTTACATTTTAGTAG 57.594 37.037 1.88 0.00 41.50 2.57
2002 2090 8.914011 TGCTAGAGATGCTCTTACATTTTAGTA 58.086 33.333 1.88 0.00 41.50 1.82
2003 2091 7.786030 TGCTAGAGATGCTCTTACATTTTAGT 58.214 34.615 1.88 0.00 41.50 2.24
2004 2092 8.140628 TCTGCTAGAGATGCTCTTACATTTTAG 58.859 37.037 1.88 0.00 41.50 1.85
2005 2093 8.011844 TCTGCTAGAGATGCTCTTACATTTTA 57.988 34.615 1.88 0.00 41.50 1.52
2006 2094 6.882656 TCTGCTAGAGATGCTCTTACATTTT 58.117 36.000 1.88 0.00 41.50 1.82
2007 2095 6.098124 ACTCTGCTAGAGATGCTCTTACATTT 59.902 38.462 16.81 0.00 45.07 2.32
2008 2096 5.598005 ACTCTGCTAGAGATGCTCTTACATT 59.402 40.000 16.81 0.00 45.07 2.71
2009 2097 5.009911 CACTCTGCTAGAGATGCTCTTACAT 59.990 44.000 16.81 0.00 45.07 2.29
2010 2098 4.337836 CACTCTGCTAGAGATGCTCTTACA 59.662 45.833 16.81 1.38 45.07 2.41
2011 2099 4.792704 GCACTCTGCTAGAGATGCTCTTAC 60.793 50.000 16.81 0.00 45.07 2.34
2012 2100 3.317711 GCACTCTGCTAGAGATGCTCTTA 59.682 47.826 16.81 0.00 45.07 2.10
2013 2101 2.101249 GCACTCTGCTAGAGATGCTCTT 59.899 50.000 16.81 0.00 45.07 2.85
2014 2102 1.682854 GCACTCTGCTAGAGATGCTCT 59.317 52.381 16.81 2.22 45.07 4.09
2015 2103 1.408340 TGCACTCTGCTAGAGATGCTC 59.592 52.381 23.51 0.00 45.07 4.26
2016 2104 1.482954 TGCACTCTGCTAGAGATGCT 58.517 50.000 23.51 5.76 45.07 3.79
2017 2105 2.306341 TTGCACTCTGCTAGAGATGC 57.694 50.000 16.81 18.91 45.07 3.91
2018 2106 2.544686 GCATTGCACTCTGCTAGAGATG 59.455 50.000 16.81 11.65 45.07 2.90
2019 2107 2.169978 TGCATTGCACTCTGCTAGAGAT 59.830 45.455 7.38 1.38 45.06 2.75
2020 2108 1.551883 TGCATTGCACTCTGCTAGAGA 59.448 47.619 7.38 0.00 45.06 3.10
2022 2110 2.477845 TTGCATTGCACTCTGCTAGA 57.522 45.000 11.66 0.00 45.31 2.43
2023 2111 3.564235 TTTTGCATTGCACTCTGCTAG 57.436 42.857 11.66 0.00 45.31 3.42
2025 2113 2.894763 TTTTTGCATTGCACTCTGCT 57.105 40.000 11.66 0.00 45.31 4.24
2041 2129 7.765695 TGTCTCTCAAGCCTTCATAATTTTT 57.234 32.000 0.00 0.00 0.00 1.94
2042 2130 7.449704 AGTTGTCTCTCAAGCCTTCATAATTTT 59.550 33.333 0.00 0.00 36.66 1.82
2043 2131 6.944862 AGTTGTCTCTCAAGCCTTCATAATTT 59.055 34.615 0.00 0.00 36.66 1.82
2044 2132 6.479884 AGTTGTCTCTCAAGCCTTCATAATT 58.520 36.000 0.00 0.00 36.66 1.40
2045 2133 6.059787 AGTTGTCTCTCAAGCCTTCATAAT 57.940 37.500 0.00 0.00 36.66 1.28
2046 2134 5.482908 GAGTTGTCTCTCAAGCCTTCATAA 58.517 41.667 0.00 0.00 36.66 1.90
2047 2135 4.380973 CGAGTTGTCTCTCAAGCCTTCATA 60.381 45.833 0.00 0.00 38.45 2.15
2048 2136 3.616076 CGAGTTGTCTCTCAAGCCTTCAT 60.616 47.826 0.00 0.00 38.45 2.57
2049 2137 2.288457 CGAGTTGTCTCTCAAGCCTTCA 60.288 50.000 0.00 0.00 38.45 3.02
2050 2138 2.333014 CGAGTTGTCTCTCAAGCCTTC 58.667 52.381 0.00 0.00 38.45 3.46
2051 2139 1.606737 GCGAGTTGTCTCTCAAGCCTT 60.607 52.381 0.00 0.00 38.45 4.35
2052 2140 0.037790 GCGAGTTGTCTCTCAAGCCT 60.038 55.000 0.00 0.00 38.45 4.58
2053 2141 0.319900 TGCGAGTTGTCTCTCAAGCC 60.320 55.000 0.00 0.00 38.45 4.35
2054 2142 1.502231 TTGCGAGTTGTCTCTCAAGC 58.498 50.000 0.00 0.00 39.49 4.01
2056 2144 3.579709 GATCTTGCGAGTTGTCTCTCAA 58.420 45.455 0.00 0.00 41.27 3.02
2057 2145 2.094494 GGATCTTGCGAGTTGTCTCTCA 60.094 50.000 0.00 0.00 38.45 3.27
2058 2146 2.535331 GGATCTTGCGAGTTGTCTCTC 58.465 52.381 0.00 0.00 38.45 3.20
2059 2147 1.135257 CGGATCTTGCGAGTTGTCTCT 60.135 52.381 0.00 0.00 38.45 3.10
2060 2148 1.135373 TCGGATCTTGCGAGTTGTCTC 60.135 52.381 0.00 0.00 34.66 3.36
2061 2149 0.888619 TCGGATCTTGCGAGTTGTCT 59.111 50.000 0.00 0.00 34.66 3.41
2062 2150 1.927895 ATCGGATCTTGCGAGTTGTC 58.072 50.000 0.00 0.00 44.87 3.18
2063 2151 2.093973 AGAATCGGATCTTGCGAGTTGT 60.094 45.455 0.00 0.00 44.87 3.32
2064 2152 2.544685 AGAATCGGATCTTGCGAGTTG 58.455 47.619 0.00 0.00 44.87 3.16
2065 2153 2.969628 AGAATCGGATCTTGCGAGTT 57.030 45.000 0.00 0.00 44.87 3.01
2066 2154 3.215151 TCTAGAATCGGATCTTGCGAGT 58.785 45.455 0.00 0.00 44.87 4.18
2067 2155 3.906014 TCTAGAATCGGATCTTGCGAG 57.094 47.619 0.00 0.00 44.87 5.03
2068 2156 4.760204 TGTATCTAGAATCGGATCTTGCGA 59.240 41.667 0.00 0.00 45.91 5.10
2069 2157 5.048153 TGTATCTAGAATCGGATCTTGCG 57.952 43.478 0.00 0.00 0.00 4.85
2070 2158 6.393990 ACATGTATCTAGAATCGGATCTTGC 58.606 40.000 0.00 0.00 0.00 4.01
2071 2159 7.148672 GCAACATGTATCTAGAATCGGATCTTG 60.149 40.741 0.00 0.00 0.00 3.02
2072 2160 6.870965 GCAACATGTATCTAGAATCGGATCTT 59.129 38.462 0.00 0.00 0.00 2.40
2073 2161 6.393990 GCAACATGTATCTAGAATCGGATCT 58.606 40.000 0.00 0.00 0.00 2.75
2074 2162 5.578727 GGCAACATGTATCTAGAATCGGATC 59.421 44.000 0.00 0.00 0.00 3.36
2075 2163 5.247110 AGGCAACATGTATCTAGAATCGGAT 59.753 40.000 0.00 0.00 41.41 4.18
2076 2164 4.588951 AGGCAACATGTATCTAGAATCGGA 59.411 41.667 0.00 0.00 41.41 4.55
2077 2165 4.887748 AGGCAACATGTATCTAGAATCGG 58.112 43.478 0.00 0.00 41.41 4.18
2078 2166 4.926238 GGAGGCAACATGTATCTAGAATCG 59.074 45.833 0.00 0.00 41.41 3.34
2079 2167 5.858381 TGGAGGCAACATGTATCTAGAATC 58.142 41.667 0.00 0.00 41.41 2.52
2080 2168 5.894298 TGGAGGCAACATGTATCTAGAAT 57.106 39.130 0.00 0.00 41.41 2.40
2081 2169 5.894298 ATGGAGGCAACATGTATCTAGAA 57.106 39.130 0.00 0.00 41.41 2.10
2082 2170 6.994421 TTATGGAGGCAACATGTATCTAGA 57.006 37.500 0.00 0.00 41.41 2.43
2083 2171 7.332926 GTGATTATGGAGGCAACATGTATCTAG 59.667 40.741 0.00 0.00 41.41 2.43
2084 2172 7.161404 GTGATTATGGAGGCAACATGTATCTA 58.839 38.462 0.00 0.00 41.41 1.98
2085 2173 6.000219 GTGATTATGGAGGCAACATGTATCT 59.000 40.000 0.00 0.00 41.41 1.98
2086 2174 5.764686 TGTGATTATGGAGGCAACATGTATC 59.235 40.000 0.00 0.00 41.41 2.24
2087 2175 5.532406 GTGTGATTATGGAGGCAACATGTAT 59.468 40.000 0.00 0.00 41.41 2.29
2088 2176 4.881273 GTGTGATTATGGAGGCAACATGTA 59.119 41.667 0.00 0.00 41.41 2.29
2089 2177 3.696051 GTGTGATTATGGAGGCAACATGT 59.304 43.478 0.00 0.00 41.41 3.21
2090 2178 3.242837 CGTGTGATTATGGAGGCAACATG 60.243 47.826 4.46 0.00 41.41 3.21
2091 2179 2.945008 CGTGTGATTATGGAGGCAACAT 59.055 45.455 0.00 0.00 41.41 2.71
2092 2180 2.027653 TCGTGTGATTATGGAGGCAACA 60.028 45.455 0.00 0.00 41.41 3.33
2093 2181 2.351726 GTCGTGTGATTATGGAGGCAAC 59.648 50.000 0.00 0.00 0.00 4.17
2094 2182 2.627945 GTCGTGTGATTATGGAGGCAA 58.372 47.619 0.00 0.00 0.00 4.52
2095 2183 1.134521 GGTCGTGTGATTATGGAGGCA 60.135 52.381 0.00 0.00 0.00 4.75
2096 2184 1.139058 AGGTCGTGTGATTATGGAGGC 59.861 52.381 0.00 0.00 0.00 4.70
2097 2185 3.637229 AGTAGGTCGTGTGATTATGGAGG 59.363 47.826 0.00 0.00 0.00 4.30
2098 2186 4.554919 CGAGTAGGTCGTGTGATTATGGAG 60.555 50.000 0.00 0.00 44.20 3.86
2099 2187 3.314357 CGAGTAGGTCGTGTGATTATGGA 59.686 47.826 0.00 0.00 44.20 3.41
2100 2188 3.629058 CGAGTAGGTCGTGTGATTATGG 58.371 50.000 0.00 0.00 44.20 2.74
2121 2209 5.478332 AGGGAAAAAGGAATGTCTCATTGAC 59.522 40.000 0.00 0.00 45.54 3.18
2122 2210 5.644188 AGGGAAAAAGGAATGTCTCATTGA 58.356 37.500 0.00 0.00 0.00 2.57
2123 2211 5.990120 AGGGAAAAAGGAATGTCTCATTG 57.010 39.130 0.00 0.00 0.00 2.82
2124 2212 8.670521 AAATAGGGAAAAAGGAATGTCTCATT 57.329 30.769 0.00 0.00 0.00 2.57
2125 2213 8.670521 AAAATAGGGAAAAAGGAATGTCTCAT 57.329 30.769 0.00 0.00 0.00 2.90
2126 2214 7.950124 AGAAAATAGGGAAAAAGGAATGTCTCA 59.050 33.333 0.00 0.00 0.00 3.27
2127 2215 8.354711 AGAAAATAGGGAAAAAGGAATGTCTC 57.645 34.615 0.00 0.00 0.00 3.36
2128 2216 8.173412 AGAGAAAATAGGGAAAAAGGAATGTCT 58.827 33.333 0.00 0.00 0.00 3.41
2129 2217 8.246871 CAGAGAAAATAGGGAAAAAGGAATGTC 58.753 37.037 0.00 0.00 0.00 3.06
2130 2218 7.730332 ACAGAGAAAATAGGGAAAAAGGAATGT 59.270 33.333 0.00 0.00 0.00 2.71
2131 2219 8.127150 ACAGAGAAAATAGGGAAAAAGGAATG 57.873 34.615 0.00 0.00 0.00 2.67
2132 2220 7.950124 TGACAGAGAAAATAGGGAAAAAGGAAT 59.050 33.333 0.00 0.00 0.00 3.01
2133 2221 7.294584 TGACAGAGAAAATAGGGAAAAAGGAA 58.705 34.615 0.00 0.00 0.00 3.36
2134 2222 6.848069 TGACAGAGAAAATAGGGAAAAAGGA 58.152 36.000 0.00 0.00 0.00 3.36
2135 2223 7.613411 AGATGACAGAGAAAATAGGGAAAAAGG 59.387 37.037 0.00 0.00 0.00 3.11
2136 2224 8.572855 AGATGACAGAGAAAATAGGGAAAAAG 57.427 34.615 0.00 0.00 0.00 2.27
2137 2225 8.163408 TGAGATGACAGAGAAAATAGGGAAAAA 58.837 33.333 0.00 0.00 0.00 1.94
2138 2226 7.607991 GTGAGATGACAGAGAAAATAGGGAAAA 59.392 37.037 0.00 0.00 0.00 2.29
2139 2227 7.106239 GTGAGATGACAGAGAAAATAGGGAAA 58.894 38.462 0.00 0.00 0.00 3.13
2140 2228 6.628175 CGTGAGATGACAGAGAAAATAGGGAA 60.628 42.308 0.00 0.00 0.00 3.97
2141 2229 5.163509 CGTGAGATGACAGAGAAAATAGGGA 60.164 44.000 0.00 0.00 0.00 4.20
2142 2230 5.046529 CGTGAGATGACAGAGAAAATAGGG 58.953 45.833 0.00 0.00 0.00 3.53
2143 2231 5.518128 CACGTGAGATGACAGAGAAAATAGG 59.482 44.000 10.90 0.00 0.00 2.57
2144 2232 6.325596 TCACGTGAGATGACAGAGAAAATAG 58.674 40.000 15.76 0.00 0.00 1.73
2145 2233 6.267496 TCACGTGAGATGACAGAGAAAATA 57.733 37.500 15.76 0.00 0.00 1.40
2146 2234 5.139435 TCACGTGAGATGACAGAGAAAAT 57.861 39.130 15.76 0.00 0.00 1.82
2147 2235 4.550422 CTCACGTGAGATGACAGAGAAAA 58.450 43.478 36.73 0.75 44.74 2.29
2148 2236 3.057245 CCTCACGTGAGATGACAGAGAAA 60.057 47.826 40.21 5.40 44.74 2.52
2149 2237 2.489722 CCTCACGTGAGATGACAGAGAA 59.510 50.000 40.21 5.86 44.74 2.87
2150 2238 2.087646 CCTCACGTGAGATGACAGAGA 58.912 52.381 40.21 6.07 44.74 3.10
2151 2239 1.815613 ACCTCACGTGAGATGACAGAG 59.184 52.381 40.21 25.02 44.74 3.35
2152 2240 1.541588 CACCTCACGTGAGATGACAGA 59.458 52.381 40.21 7.38 46.20 3.41
2153 2241 1.403382 CCACCTCACGTGAGATGACAG 60.403 57.143 40.21 26.31 46.20 3.51
2154 2242 0.603065 CCACCTCACGTGAGATGACA 59.397 55.000 40.21 8.91 46.20 3.58
2155 2243 0.108615 CCCACCTCACGTGAGATGAC 60.109 60.000 40.21 0.00 46.20 3.06
2156 2244 1.257750 CCCCACCTCACGTGAGATGA 61.258 60.000 40.21 10.46 46.20 2.92
2157 2245 1.219124 CCCCACCTCACGTGAGATG 59.781 63.158 40.21 35.20 46.20 2.90
2158 2246 1.990060 CCCCCACCTCACGTGAGAT 60.990 63.158 40.21 27.13 46.20 2.75
2159 2247 2.603473 CCCCCACCTCACGTGAGA 60.603 66.667 40.21 12.03 46.20 3.27
2160 2248 2.923035 ACCCCCACCTCACGTGAG 60.923 66.667 33.87 33.87 46.20 3.51
2161 2249 2.920912 GACCCCCACCTCACGTGA 60.921 66.667 18.88 18.88 46.20 4.35
2162 2250 3.238497 TGACCCCCACCTCACGTG 61.238 66.667 9.94 9.94 42.62 4.49
2163 2251 3.239253 GTGACCCCCACCTCACGT 61.239 66.667 0.00 0.00 39.86 4.49
2170 2258 0.185175 AAACTTCAGGTGACCCCCAC 59.815 55.000 0.00 0.00 44.95 4.61
2171 2259 0.184933 CAAACTTCAGGTGACCCCCA 59.815 55.000 0.00 0.00 0.00 4.96
2172 2260 1.179174 GCAAACTTCAGGTGACCCCC 61.179 60.000 0.00 0.00 0.00 5.40
2173 2261 0.178990 AGCAAACTTCAGGTGACCCC 60.179 55.000 0.00 0.00 0.00 4.95
2174 2262 1.692411 AAGCAAACTTCAGGTGACCC 58.308 50.000 0.00 0.00 0.00 4.46
2186 2274 9.735124 CATAATTTTATGTGGCGCGAAGCAAAC 62.735 40.741 12.10 0.00 44.13 2.93
2187 2275 7.864670 CATAATTTTATGTGGCGCGAAGCAAA 61.865 38.462 12.10 0.00 44.13 3.68
2188 2276 6.459642 CATAATTTTATGTGGCGCGAAGCAA 61.460 40.000 12.10 0.00 44.13 3.91
2189 2277 5.022053 CATAATTTTATGTGGCGCGAAGCA 61.022 41.667 12.10 4.59 44.13 3.91
2190 2278 3.421888 CATAATTTTATGTGGCGCGAAGC 59.578 43.478 12.10 0.00 42.21 3.86
2191 2279 3.421888 GCATAATTTTATGTGGCGCGAAG 59.578 43.478 12.10 0.00 41.92 3.79
2192 2280 3.181496 TGCATAATTTTATGTGGCGCGAA 60.181 39.130 12.10 0.00 41.92 4.70
2193 2281 2.356069 TGCATAATTTTATGTGGCGCGA 59.644 40.909 12.10 0.00 41.92 5.87
2194 2282 2.725490 TGCATAATTTTATGTGGCGCG 58.275 42.857 0.00 0.00 41.92 6.86
2195 2283 4.324402 GCTATGCATAATTTTATGTGGCGC 59.676 41.667 8.00 0.00 41.92 6.53
2196 2284 5.570206 CAGCTATGCATAATTTTATGTGGCG 59.430 40.000 8.00 0.00 41.92 5.69
2197 2285 6.939551 CAGCTATGCATAATTTTATGTGGC 57.060 37.500 8.00 3.68 41.92 5.01
2213 2301 2.864946 GCTCGATCATATGGCAGCTATG 59.135 50.000 0.51 2.34 0.00 2.23
2214 2302 2.498885 TGCTCGATCATATGGCAGCTAT 59.501 45.455 2.13 0.00 0.00 2.97
2215 2303 1.895131 TGCTCGATCATATGGCAGCTA 59.105 47.619 2.13 0.00 0.00 3.32
2216 2304 0.683412 TGCTCGATCATATGGCAGCT 59.317 50.000 2.13 0.00 0.00 4.24
2217 2305 0.795085 GTGCTCGATCATATGGCAGC 59.205 55.000 2.13 6.09 33.47 5.25
2218 2306 1.270465 TGGTGCTCGATCATATGGCAG 60.270 52.381 2.13 0.00 33.47 4.85
2219 2307 0.758123 TGGTGCTCGATCATATGGCA 59.242 50.000 2.13 0.98 0.00 4.92
2220 2308 1.882912 TTGGTGCTCGATCATATGGC 58.117 50.000 2.13 0.00 0.00 4.40
2221 2309 4.790766 GCTTTTTGGTGCTCGATCATATGG 60.791 45.833 2.13 0.00 0.00 2.74
2222 2310 4.201940 TGCTTTTTGGTGCTCGATCATATG 60.202 41.667 0.00 0.00 0.00 1.78
2223 2311 3.947196 TGCTTTTTGGTGCTCGATCATAT 59.053 39.130 0.00 0.00 0.00 1.78
2224 2312 3.342719 TGCTTTTTGGTGCTCGATCATA 58.657 40.909 0.00 0.00 0.00 2.15
2225 2313 2.161855 TGCTTTTTGGTGCTCGATCAT 58.838 42.857 0.00 0.00 0.00 2.45
2226 2314 1.536766 CTGCTTTTTGGTGCTCGATCA 59.463 47.619 0.00 0.00 0.00 2.92
2227 2315 1.730446 GCTGCTTTTTGGTGCTCGATC 60.730 52.381 0.00 0.00 0.00 3.69
2228 2316 0.242017 GCTGCTTTTTGGTGCTCGAT 59.758 50.000 0.00 0.00 0.00 3.59
2229 2317 0.819259 AGCTGCTTTTTGGTGCTCGA 60.819 50.000 0.00 0.00 0.00 4.04
2230 2318 0.874390 TAGCTGCTTTTTGGTGCTCG 59.126 50.000 7.79 0.00 35.47 5.03
2231 2319 2.489329 TCATAGCTGCTTTTTGGTGCTC 59.511 45.455 7.79 0.00 35.47 4.26
2232 2320 2.490903 CTCATAGCTGCTTTTTGGTGCT 59.509 45.455 7.79 0.00 37.72 4.40
2233 2321 2.489329 TCTCATAGCTGCTTTTTGGTGC 59.511 45.455 7.79 0.00 0.00 5.01
2234 2322 3.425359 CGTCTCATAGCTGCTTTTTGGTG 60.425 47.826 7.79 0.00 0.00 4.17
2235 2323 2.744202 CGTCTCATAGCTGCTTTTTGGT 59.256 45.455 7.79 0.00 0.00 3.67
2236 2324 3.002791 TCGTCTCATAGCTGCTTTTTGG 58.997 45.455 7.79 0.00 0.00 3.28
2237 2325 3.681897 ACTCGTCTCATAGCTGCTTTTTG 59.318 43.478 7.79 4.02 0.00 2.44
2238 2326 3.681897 CACTCGTCTCATAGCTGCTTTTT 59.318 43.478 7.79 0.00 0.00 1.94
2239 2327 3.257393 CACTCGTCTCATAGCTGCTTTT 58.743 45.455 7.79 0.00 0.00 2.27
2240 2328 2.886081 CACTCGTCTCATAGCTGCTTT 58.114 47.619 7.79 0.00 0.00 3.51
2241 2329 1.470632 GCACTCGTCTCATAGCTGCTT 60.471 52.381 7.79 0.00 0.00 3.91
2242 2330 0.102120 GCACTCGTCTCATAGCTGCT 59.898 55.000 7.57 7.57 0.00 4.24
2243 2331 1.205485 CGCACTCGTCTCATAGCTGC 61.205 60.000 0.00 0.00 0.00 5.25
2244 2332 0.378610 TCGCACTCGTCTCATAGCTG 59.621 55.000 0.00 0.00 36.96 4.24
2245 2333 1.095600 TTCGCACTCGTCTCATAGCT 58.904 50.000 0.00 0.00 36.96 3.32
2246 2334 2.126914 ATTCGCACTCGTCTCATAGC 57.873 50.000 0.00 0.00 36.96 2.97
2247 2335 3.302092 GCAAATTCGCACTCGTCTCATAG 60.302 47.826 0.00 0.00 36.96 2.23
2248 2336 2.603110 GCAAATTCGCACTCGTCTCATA 59.397 45.455 0.00 0.00 36.96 2.15
2249 2337 1.394917 GCAAATTCGCACTCGTCTCAT 59.605 47.619 0.00 0.00 36.96 2.90
2250 2338 0.790207 GCAAATTCGCACTCGTCTCA 59.210 50.000 0.00 0.00 36.96 3.27
2251 2339 0.790207 TGCAAATTCGCACTCGTCTC 59.210 50.000 0.00 0.00 36.86 3.36
2252 2340 0.792640 CTGCAAATTCGCACTCGTCT 59.207 50.000 0.00 0.00 36.86 4.18
2253 2341 0.790866 GCTGCAAATTCGCACTCGTC 60.791 55.000 0.00 0.00 36.86 4.20
2254 2342 1.207593 GCTGCAAATTCGCACTCGT 59.792 52.632 0.00 0.00 36.86 4.18
2255 2343 1.207339 TGCTGCAAATTCGCACTCG 59.793 52.632 0.00 0.00 36.86 4.18
2259 2347 2.650196 GGGTGCTGCAAATTCGCA 59.350 55.556 2.77 0.00 40.32 5.10
2260 2348 2.504681 CGGGTGCTGCAAATTCGC 60.505 61.111 2.77 0.00 0.00 4.70
2261 2349 1.135315 CTCGGGTGCTGCAAATTCG 59.865 57.895 2.77 6.38 0.00 3.34
2262 2350 1.153958 GCTCGGGTGCTGCAAATTC 60.154 57.895 2.77 0.00 0.00 2.17
2263 2351 1.589716 GAGCTCGGGTGCTGCAAATT 61.590 55.000 2.77 0.00 44.17 1.82
2264 2352 2.034687 AGCTCGGGTGCTGCAAAT 59.965 55.556 2.77 0.00 42.33 2.32
2265 2353 2.669569 GAGCTCGGGTGCTGCAAA 60.670 61.111 2.77 0.00 44.17 3.68
2269 2357 2.110967 CAATGGAGCTCGGGTGCTG 61.111 63.158 7.83 0.00 44.17 4.41
2271 2359 3.512516 GCAATGGAGCTCGGGTGC 61.513 66.667 15.56 15.56 0.00 5.01
2272 2360 2.270205 AGCAATGGAGCTCGGGTG 59.730 61.111 7.83 6.22 42.18 4.61
2278 2366 9.849279 TGTTCAAACATAGAGAGCAATGGAGCT 62.849 40.741 0.00 0.00 40.00 4.09
2279 2367 4.194640 TCAAACATAGAGAGCAATGGAGC 58.805 43.478 0.00 0.00 0.00 4.70
2280 2368 5.645067 TGTTCAAACATAGAGAGCAATGGAG 59.355 40.000 0.00 0.00 33.17 3.86
2281 2369 5.559770 TGTTCAAACATAGAGAGCAATGGA 58.440 37.500 0.00 0.00 33.17 3.41
2282 2370 5.885230 TGTTCAAACATAGAGAGCAATGG 57.115 39.130 0.00 0.00 33.17 3.16
2346 2434 5.878406 ATGTGTGTTTGTATCCCCAAAAA 57.122 34.783 0.00 0.00 36.17 1.94
2347 2435 5.878406 AATGTGTGTTTGTATCCCCAAAA 57.122 34.783 0.00 0.00 36.17 2.44
2348 2436 5.878406 AAATGTGTGTTTGTATCCCCAAA 57.122 34.783 0.00 0.00 32.12 3.28
2349 2437 5.363868 TCAAAATGTGTGTTTGTATCCCCAA 59.636 36.000 0.00 0.00 37.28 4.12
2350 2438 4.895889 TCAAAATGTGTGTTTGTATCCCCA 59.104 37.500 0.00 0.00 37.28 4.96
2351 2439 5.461032 TCAAAATGTGTGTTTGTATCCCC 57.539 39.130 0.00 0.00 37.28 4.81
2352 2440 7.544217 GGTATTCAAAATGTGTGTTTGTATCCC 59.456 37.037 0.00 0.00 37.28 3.85
2353 2441 7.544217 GGGTATTCAAAATGTGTGTTTGTATCC 59.456 37.037 0.00 0.00 37.28 2.59
2354 2442 7.272515 CGGGTATTCAAAATGTGTGTTTGTATC 59.727 37.037 0.00 0.00 37.28 2.24
2355 2443 7.087639 CGGGTATTCAAAATGTGTGTTTGTAT 58.912 34.615 0.00 0.00 37.28 2.29
2356 2444 6.039493 ACGGGTATTCAAAATGTGTGTTTGTA 59.961 34.615 0.00 0.00 37.28 2.41
2357 2445 5.163499 ACGGGTATTCAAAATGTGTGTTTGT 60.163 36.000 0.00 0.00 37.28 2.83
2358 2446 5.174761 CACGGGTATTCAAAATGTGTGTTTG 59.825 40.000 0.00 0.00 37.32 2.93
2359 2447 5.285651 CACGGGTATTCAAAATGTGTGTTT 58.714 37.500 0.00 0.00 0.00 2.83
2360 2448 4.261825 CCACGGGTATTCAAAATGTGTGTT 60.262 41.667 0.00 0.00 0.00 3.32
2361 2449 3.254657 CCACGGGTATTCAAAATGTGTGT 59.745 43.478 0.00 0.00 0.00 3.72
2362 2450 3.832276 CCACGGGTATTCAAAATGTGTG 58.168 45.455 0.00 0.00 0.00 3.82
2363 2451 2.230266 GCCACGGGTATTCAAAATGTGT 59.770 45.455 0.00 0.00 0.00 3.72
2364 2452 2.230025 TGCCACGGGTATTCAAAATGTG 59.770 45.455 0.00 0.00 0.00 3.21
2365 2453 2.520069 TGCCACGGGTATTCAAAATGT 58.480 42.857 0.00 0.00 0.00 2.71
2366 2454 3.119173 ACATGCCACGGGTATTCAAAATG 60.119 43.478 0.00 0.00 0.00 2.32
2367 2455 3.096092 ACATGCCACGGGTATTCAAAAT 58.904 40.909 0.00 0.00 0.00 1.82
2368 2456 2.520069 ACATGCCACGGGTATTCAAAA 58.480 42.857 0.00 0.00 0.00 2.44
2369 2457 2.208132 ACATGCCACGGGTATTCAAA 57.792 45.000 0.00 0.00 0.00 2.69
2370 2458 2.208132 AACATGCCACGGGTATTCAA 57.792 45.000 0.00 0.00 0.00 2.69
2371 2459 2.208132 AAACATGCCACGGGTATTCA 57.792 45.000 0.00 0.00 0.00 2.57
2372 2460 3.630312 ACATAAACATGCCACGGGTATTC 59.370 43.478 0.00 0.00 0.00 1.75
2373 2461 3.626930 ACATAAACATGCCACGGGTATT 58.373 40.909 0.00 0.00 0.00 1.89
2374 2462 3.290948 ACATAAACATGCCACGGGTAT 57.709 42.857 0.00 0.00 0.00 2.73
2375 2463 2.791347 ACATAAACATGCCACGGGTA 57.209 45.000 0.00 0.00 0.00 3.69
2376 2464 2.237643 TCTACATAAACATGCCACGGGT 59.762 45.455 0.00 0.00 0.00 5.28
2377 2465 2.912771 TCTACATAAACATGCCACGGG 58.087 47.619 0.00 0.00 0.00 5.28
2378 2466 4.955925 TTTCTACATAAACATGCCACGG 57.044 40.909 0.00 0.00 0.00 4.94
2379 2467 6.363577 AGATTTCTACATAAACATGCCACG 57.636 37.500 0.00 0.00 0.00 4.94
2380 2468 7.538575 ACAAGATTTCTACATAAACATGCCAC 58.461 34.615 0.00 0.00 0.00 5.01
2381 2469 7.701539 ACAAGATTTCTACATAAACATGCCA 57.298 32.000 0.00 0.00 0.00 4.92
2382 2470 8.986477 AAACAAGATTTCTACATAAACATGCC 57.014 30.769 0.00 0.00 0.00 4.40
2390 2478 8.723311 CCCGTAACAAAACAAGATTTCTACATA 58.277 33.333 0.00 0.00 0.00 2.29
2391 2479 7.590279 CCCGTAACAAAACAAGATTTCTACAT 58.410 34.615 0.00 0.00 0.00 2.29
2392 2480 6.513720 GCCCGTAACAAAACAAGATTTCTACA 60.514 38.462 0.00 0.00 0.00 2.74
2393 2481 5.854866 GCCCGTAACAAAACAAGATTTCTAC 59.145 40.000 0.00 0.00 0.00 2.59
2394 2482 5.766174 AGCCCGTAACAAAACAAGATTTCTA 59.234 36.000 0.00 0.00 0.00 2.10
2395 2483 4.583073 AGCCCGTAACAAAACAAGATTTCT 59.417 37.500 0.00 0.00 0.00 2.52
2396 2484 4.866921 AGCCCGTAACAAAACAAGATTTC 58.133 39.130 0.00 0.00 0.00 2.17
2397 2485 4.929819 AGCCCGTAACAAAACAAGATTT 57.070 36.364 0.00 0.00 0.00 2.17
2398 2486 7.107542 TCTATAGCCCGTAACAAAACAAGATT 58.892 34.615 0.00 0.00 0.00 2.40
2399 2487 6.646267 TCTATAGCCCGTAACAAAACAAGAT 58.354 36.000 0.00 0.00 0.00 2.40
2400 2488 6.040209 TCTATAGCCCGTAACAAAACAAGA 57.960 37.500 0.00 0.00 0.00 3.02
2401 2489 6.730960 TTCTATAGCCCGTAACAAAACAAG 57.269 37.500 0.00 0.00 0.00 3.16
2402 2490 7.507733 TTTTCTATAGCCCGTAACAAAACAA 57.492 32.000 0.00 0.00 0.00 2.83
2403 2491 7.507733 TTTTTCTATAGCCCGTAACAAAACA 57.492 32.000 0.00 0.00 0.00 2.83
2430 2518 9.905713 TCCTATATACTGTCAGAAATTTGCTTT 57.094 29.630 6.91 0.00 0.00 3.51
2431 2519 9.553064 CTCCTATATACTGTCAGAAATTTGCTT 57.447 33.333 6.91 0.00 0.00 3.91
2432 2520 8.928448 TCTCCTATATACTGTCAGAAATTTGCT 58.072 33.333 6.91 0.00 0.00 3.91
2433 2521 9.547753 TTCTCCTATATACTGTCAGAAATTTGC 57.452 33.333 6.91 0.00 0.00 3.68
2439 2527 8.705594 CCCTTTTTCTCCTATATACTGTCAGAA 58.294 37.037 6.91 0.00 0.00 3.02
2440 2528 7.844779 ACCCTTTTTCTCCTATATACTGTCAGA 59.155 37.037 6.91 0.00 0.00 3.27
2441 2529 7.928706 CACCCTTTTTCTCCTATATACTGTCAG 59.071 40.741 0.00 0.00 0.00 3.51
2442 2530 7.635089 GCACCCTTTTTCTCCTATATACTGTCA 60.635 40.741 0.00 0.00 0.00 3.58
2443 2531 6.706716 GCACCCTTTTTCTCCTATATACTGTC 59.293 42.308 0.00 0.00 0.00 3.51
2444 2532 6.409349 GGCACCCTTTTTCTCCTATATACTGT 60.409 42.308 0.00 0.00 0.00 3.55
2445 2533 5.998363 GGCACCCTTTTTCTCCTATATACTG 59.002 44.000 0.00 0.00 0.00 2.74
2446 2534 5.670361 TGGCACCCTTTTTCTCCTATATACT 59.330 40.000 0.00 0.00 0.00 2.12
2447 2535 5.937111 TGGCACCCTTTTTCTCCTATATAC 58.063 41.667 0.00 0.00 0.00 1.47
2448 2536 6.780198 ATGGCACCCTTTTTCTCCTATATA 57.220 37.500 0.00 0.00 0.00 0.86
2449 2537 5.669798 ATGGCACCCTTTTTCTCCTATAT 57.330 39.130 0.00 0.00 0.00 0.86
2450 2538 5.466127 AATGGCACCCTTTTTCTCCTATA 57.534 39.130 0.00 0.00 0.00 1.31
2451 2539 4.337264 AATGGCACCCTTTTTCTCCTAT 57.663 40.909 0.00 0.00 0.00 2.57
2452 2540 3.825908 AATGGCACCCTTTTTCTCCTA 57.174 42.857 0.00 0.00 0.00 2.94
2453 2541 2.702270 AATGGCACCCTTTTTCTCCT 57.298 45.000 0.00 0.00 0.00 3.69
2454 2542 2.028112 GGAAATGGCACCCTTTTTCTCC 60.028 50.000 9.60 0.00 32.25 3.71
2455 2543 2.352715 CGGAAATGGCACCCTTTTTCTC 60.353 50.000 9.60 1.58 32.25 2.87
2456 2544 1.618343 CGGAAATGGCACCCTTTTTCT 59.382 47.619 9.60 0.00 32.25 2.52
2457 2545 1.343142 ACGGAAATGGCACCCTTTTTC 59.657 47.619 0.00 0.00 32.25 2.29
2458 2546 1.343142 GACGGAAATGGCACCCTTTTT 59.657 47.619 0.00 0.00 32.25 1.94
2459 2547 0.966179 GACGGAAATGGCACCCTTTT 59.034 50.000 0.00 0.00 34.30 2.27
2460 2548 0.178975 TGACGGAAATGGCACCCTTT 60.179 50.000 0.00 0.00 0.00 3.11
2461 2549 0.609131 CTGACGGAAATGGCACCCTT 60.609 55.000 0.00 0.00 0.00 3.95
2462 2550 1.002134 CTGACGGAAATGGCACCCT 60.002 57.895 0.00 0.00 0.00 4.34
2463 2551 0.608035 TTCTGACGGAAATGGCACCC 60.608 55.000 0.00 0.00 0.00 4.61
2464 2552 1.243902 TTTCTGACGGAAATGGCACC 58.756 50.000 5.30 0.00 38.81 5.01
2471 2559 7.543756 ACAAAAAGAGAAATTTCTGACGGAAA 58.456 30.769 25.12 11.79 46.33 3.13
2472 2560 7.095695 ACAAAAAGAGAAATTTCTGACGGAA 57.904 32.000 25.12 0.00 37.73 4.30
2473 2561 6.693315 ACAAAAAGAGAAATTTCTGACGGA 57.307 33.333 25.12 0.00 37.73 4.69
2474 2562 7.639945 AGTACAAAAAGAGAAATTTCTGACGG 58.360 34.615 25.12 11.44 37.73 4.79
2475 2563 9.159470 GAAGTACAAAAAGAGAAATTTCTGACG 57.841 33.333 25.12 9.62 37.73 4.35
2476 2564 9.452065 GGAAGTACAAAAAGAGAAATTTCTGAC 57.548 33.333 25.12 11.70 37.73 3.51
2477 2565 8.630037 GGGAAGTACAAAAAGAGAAATTTCTGA 58.370 33.333 25.12 0.00 37.73 3.27
2478 2566 8.413229 TGGGAAGTACAAAAAGAGAAATTTCTG 58.587 33.333 25.12 12.62 37.73 3.02
2479 2567 8.533569 TGGGAAGTACAAAAAGAGAAATTTCT 57.466 30.769 20.60 20.60 41.00 2.52
2480 2568 9.594478 TTTGGGAAGTACAAAAAGAGAAATTTC 57.406 29.630 10.33 10.33 35.11 2.17
2481 2569 9.952030 TTTTGGGAAGTACAAAAAGAGAAATTT 57.048 25.926 0.00 0.00 42.77 1.82
2482 2570 9.378551 GTTTTGGGAAGTACAAAAAGAGAAATT 57.621 29.630 5.07 0.00 45.90 1.82
2483 2571 7.704899 CGTTTTGGGAAGTACAAAAAGAGAAAT 59.295 33.333 9.78 0.00 45.90 2.17
2484 2572 7.030768 CGTTTTGGGAAGTACAAAAAGAGAAA 58.969 34.615 9.78 0.00 45.90 2.52
2485 2573 6.557110 CGTTTTGGGAAGTACAAAAAGAGAA 58.443 36.000 9.78 0.00 45.90 2.87
2486 2574 5.449451 GCGTTTTGGGAAGTACAAAAAGAGA 60.449 40.000 16.58 0.00 45.90 3.10
2487 2575 4.738252 GCGTTTTGGGAAGTACAAAAAGAG 59.262 41.667 16.58 8.36 45.90 2.85
2488 2576 4.158025 TGCGTTTTGGGAAGTACAAAAAGA 59.842 37.500 16.58 3.93 45.90 2.52
2489 2577 4.425520 TGCGTTTTGGGAAGTACAAAAAG 58.574 39.130 10.65 10.65 45.90 2.27
2490 2578 4.451629 TGCGTTTTGGGAAGTACAAAAA 57.548 36.364 5.07 0.00 45.90 1.94
2491 2579 4.451629 TTGCGTTTTGGGAAGTACAAAA 57.548 36.364 0.00 0.00 43.30 2.44
2492 2580 4.082136 ACTTTGCGTTTTGGGAAGTACAAA 60.082 37.500 0.00 0.00 36.15 2.83
2493 2581 3.444388 ACTTTGCGTTTTGGGAAGTACAA 59.556 39.130 0.00 0.00 0.00 2.41
2494 2582 3.018149 ACTTTGCGTTTTGGGAAGTACA 58.982 40.909 0.00 0.00 0.00 2.90
2495 2583 3.703286 ACTTTGCGTTTTGGGAAGTAC 57.297 42.857 0.00 0.00 0.00 2.73
2496 2584 6.263617 AGAAATACTTTGCGTTTTGGGAAGTA 59.736 34.615 0.00 0.00 37.26 2.24
2497 2585 4.929819 AATACTTTGCGTTTTGGGAAGT 57.070 36.364 0.00 0.00 35.07 3.01
2498 2586 5.528870 AGAAATACTTTGCGTTTTGGGAAG 58.471 37.500 0.00 0.00 0.00 3.46
2499 2587 5.523438 AGAAATACTTTGCGTTTTGGGAA 57.477 34.783 0.00 0.00 0.00 3.97
2500 2588 5.523438 AAGAAATACTTTGCGTTTTGGGA 57.477 34.783 0.00 0.00 34.94 4.37
2501 2589 6.292649 GGAAAAGAAATACTTTGCGTTTTGGG 60.293 38.462 0.00 0.00 46.55 4.12
2502 2590 6.256757 TGGAAAAGAAATACTTTGCGTTTTGG 59.743 34.615 0.00 0.00 46.55 3.28
2503 2591 7.227992 TGGAAAAGAAATACTTTGCGTTTTG 57.772 32.000 0.00 0.00 46.55 2.44
2504 2592 9.705290 ATATGGAAAAGAAATACTTTGCGTTTT 57.295 25.926 0.00 0.00 46.55 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.