Multiple sequence alignment - TraesCS7D01G360700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G360700 chr7D 100.000 5359 0 0 2066 7424 463699719 463705077 0.000000e+00 9897.0
1 TraesCS7D01G360700 chr7D 100.000 1685 0 0 1 1685 463697654 463699338 0.000000e+00 3112.0
2 TraesCS7D01G360700 chr7D 95.000 40 2 0 3307 3346 163564193 163564232 6.220000e-06 63.9
3 TraesCS7D01G360700 chr7B 93.984 3225 165 10 2804 6016 488373252 488370045 0.000000e+00 4854.0
4 TraesCS7D01G360700 chr7B 94.136 955 30 11 692 1626 488374958 488374010 0.000000e+00 1430.0
5 TraesCS7D01G360700 chr7B 93.785 708 33 5 2066 2772 488373947 488373250 0.000000e+00 1053.0
6 TraesCS7D01G360700 chr7B 93.052 403 26 2 6025 6426 488370063 488369662 8.300000e-164 588.0
7 TraesCS7D01G360700 chr7B 83.871 186 28 2 2078 2262 402824864 402824680 7.660000e-40 176.0
8 TraesCS7D01G360700 chr7B 75.410 366 62 20 2 354 488376228 488375878 1.290000e-32 152.0
9 TraesCS7D01G360700 chr7B 80.916 131 15 7 1 129 488375987 488375865 2.210000e-15 95.3
10 TraesCS7D01G360700 chr7A 94.376 2258 106 14 3744 5995 536773928 536771686 0.000000e+00 3446.0
11 TraesCS7D01G360700 chr7A 94.351 956 39 8 2073 3027 536776125 536775184 0.000000e+00 1452.0
12 TraesCS7D01G360700 chr7A 93.157 643 44 0 3105 3747 536774783 536774141 0.000000e+00 944.0
13 TraesCS7D01G360700 chr7A 92.199 423 13 7 767 1180 536777318 536776907 1.390000e-161 580.0
14 TraesCS7D01G360700 chr7A 91.709 398 33 0 6029 6426 536771621 536771224 3.030000e-153 553.0
15 TraesCS7D01G360700 chr7A 90.000 410 40 1 6064 6473 536725993 536725585 5.100000e-146 529.0
16 TraesCS7D01G360700 chr7A 88.326 454 32 11 1193 1626 536776654 536776202 6.600000e-145 525.0
17 TraesCS7D01G360700 chr7A 82.299 548 66 24 5171 5712 536726856 536726334 5.280000e-121 446.0
18 TraesCS7D01G360700 chr7A 88.674 362 39 2 6507 6867 536725591 536725231 2.460000e-119 440.0
19 TraesCS7D01G360700 chr7A 93.182 176 11 1 7068 7242 536725127 536724952 2.660000e-64 257.0
20 TraesCS7D01G360700 chr7A 83.744 203 32 1 3938 4139 536729862 536729660 2.730000e-44 191.0
21 TraesCS7D01G360700 chr7A 91.429 105 6 3 6907 7009 536725225 536725122 2.790000e-29 141.0
22 TraesCS7D01G360700 chr7A 96.970 66 2 0 7268 7333 536724951 536724886 2.190000e-20 111.0
23 TraesCS7D01G360700 chr2B 82.395 1829 276 30 4623 6430 638275503 638277306 0.000000e+00 1552.0
24 TraesCS7D01G360700 chr2B 82.934 1336 198 27 5113 6434 638528814 638530133 0.000000e+00 1177.0
25 TraesCS7D01G360700 chr2B 84.639 332 45 3 6105 6430 643266808 643267139 7.180000e-85 326.0
26 TraesCS7D01G360700 chr2B 83.792 327 47 4 6105 6425 643361104 643361430 9.360000e-79 305.0
27 TraesCS7D01G360700 chr2B 86.702 188 23 2 2075 2261 211629163 211629349 2.710000e-49 207.0
28 TraesCS7D01G360700 chr2B 88.125 160 17 2 2103 2260 7767494 7767653 9.830000e-44 189.0
29 TraesCS7D01G360700 chr2B 77.328 247 41 3 942 1179 638519565 638519805 1.680000e-26 132.0
30 TraesCS7D01G360700 chr2B 95.122 41 2 0 3306 3346 20142863 20142823 1.730000e-06 65.8
31 TraesCS7D01G360700 chr2D 85.015 327 43 4 6105 6425 539417265 539417591 2.000000e-85 327.0
32 TraesCS7D01G360700 chr2D 81.298 262 42 6 3871 4127 539414453 539414712 9.760000e-49 206.0
33 TraesCS7D01G360700 chr2D 79.747 79 14 2 513 590 8948929 8949006 1.000000e-03 56.5
34 TraesCS7D01G360700 chr2A 84.337 332 46 2 6105 6430 682626387 682626718 3.340000e-83 320.0
35 TraesCS7D01G360700 chr2A 80.620 258 47 3 3873 4128 682623404 682623660 5.880000e-46 196.0
36 TraesCS7D01G360700 chr2A 83.598 189 28 3 2077 2263 66787062 66787249 2.750000e-39 174.0
37 TraesCS7D01G360700 chr2A 100.000 28 0 0 3276 3303 325796123 325796150 1.300000e-02 52.8
38 TraesCS7D01G360700 chr2A 100.000 28 0 0 3276 3303 339107534 339107507 1.300000e-02 52.8
39 TraesCS7D01G360700 chr3A 84.343 198 26 5 2077 2270 522063673 522063869 9.830000e-44 189.0
40 TraesCS7D01G360700 chr3B 83.511 188 27 4 2080 2265 752304855 752304670 9.900000e-39 172.0
41 TraesCS7D01G360700 chr3B 85.135 74 8 3 3276 3346 644679808 644679735 1.030000e-08 73.1
42 TraesCS7D01G360700 chr3D 83.511 188 26 4 2084 2269 438515722 438515538 3.560000e-38 171.0
43 TraesCS7D01G360700 chr6D 97.436 39 1 0 3308 3346 85798394 85798356 4.810000e-07 67.6
44 TraesCS7D01G360700 chr6B 95.238 42 2 0 3305 3346 706132655 706132696 4.810000e-07 67.6
45 TraesCS7D01G360700 chr6B 95.122 41 2 0 3308 3348 162174636 162174596 1.730000e-06 65.8
46 TraesCS7D01G360700 chr1D 95.000 40 2 0 3307 3346 454856565 454856604 6.220000e-06 63.9
47 TraesCS7D01G360700 chr5A 100.000 28 0 0 562 589 658906218 658906245 1.300000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G360700 chr7D 463697654 463705077 7423 False 6504.500000 9897 100.000000 1 7424 2 chr7D.!!$F2 7423
1 TraesCS7D01G360700 chr7B 488369662 488376228 6566 True 1362.050000 4854 88.547167 1 6426 6 chr7B.!!$R2 6425
2 TraesCS7D01G360700 chr7A 536771224 536777318 6094 True 1250.000000 3446 92.353000 767 6426 6 chr7A.!!$R2 5659
3 TraesCS7D01G360700 chr7A 536724886 536729862 4976 True 302.142857 529 89.471143 3938 7333 7 chr7A.!!$R1 3395
4 TraesCS7D01G360700 chr2B 638275503 638277306 1803 False 1552.000000 1552 82.395000 4623 6430 1 chr2B.!!$F3 1807
5 TraesCS7D01G360700 chr2B 638528814 638530133 1319 False 1177.000000 1177 82.934000 5113 6434 1 chr2B.!!$F5 1321
6 TraesCS7D01G360700 chr2D 539414453 539417591 3138 False 266.500000 327 83.156500 3871 6425 2 chr2D.!!$F2 2554
7 TraesCS7D01G360700 chr2A 682623404 682626718 3314 False 258.000000 320 82.478500 3873 6430 2 chr2A.!!$F3 2557

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
537 635 1.014352 CGATTTGGACCGGGAATGAC 58.986 55.000 6.32 0.0 0.00 3.06 F
820 1461 1.082104 GCACAAAAAGAGCGACGGG 60.082 57.895 0.00 0.0 0.00 5.28 F
1522 2439 3.326006 TCTGGATAAGCATGATCACCTCC 59.674 47.826 0.00 0.0 0.00 4.30 F
2430 3348 0.179134 TGTCCAAAACGGCAAAACGG 60.179 50.000 0.00 0.0 38.39 4.44 F
3174 4420 0.538287 ACTTTTGGCCTGGAGAGTGC 60.538 55.000 3.32 0.0 0.00 4.40 F
3679 4928 0.329596 AGTTTCCATGACCTCCCAGC 59.670 55.000 0.00 0.0 0.00 4.85 F
4496 6041 0.400594 ACCTCTTTCCCCCAAGAACG 59.599 55.000 0.00 0.0 32.24 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1635 2552 1.077212 CCCAGCCATGCACTAAGCT 60.077 57.895 0.00 0.0 45.94 3.74 R
1637 2554 1.454479 CCCCCAGCCATGCACTAAG 60.454 63.158 0.00 0.0 0.00 2.18 R
3077 4000 0.941207 CCCCCTTCCCACCCAAATAT 59.059 55.000 0.00 0.0 0.00 1.28 R
3663 4912 0.776810 TTTGCTGGGAGGTCATGGAA 59.223 50.000 0.00 0.0 0.00 3.53 R
4596 8201 3.621794 GACATATTTGTGCGATGCTTCC 58.378 45.455 0.00 0.0 35.79 3.46 R
5609 9566 0.253894 TCCCACACCAGCATCATCAG 59.746 55.000 0.00 0.0 0.00 2.90 R
6492 10581 0.036765 AGAGCACGGCCAATTCGTAA 60.037 50.000 2.24 0.0 38.94 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 7.395190 TCAGTTCATGATCATTTTTCCGAAT 57.605 32.000 5.16 0.00 31.12 3.34
85 86 7.225784 TGATCATTTTTCCGAATTCCTGAAA 57.774 32.000 11.72 11.72 0.00 2.69
87 88 8.147058 TGATCATTTTTCCGAATTCCTGAAAAA 58.853 29.630 27.86 27.86 46.15 1.94
138 232 5.669477 TCCAAACATTTTTCCAAACTCCTG 58.331 37.500 0.00 0.00 0.00 3.86
148 242 4.335400 TCCAAACTCCTGAAAAATTGCC 57.665 40.909 0.00 0.00 0.00 4.52
188 283 6.271488 TCATTTCCGAGCATTTTCTCAAAT 57.729 33.333 0.00 0.00 32.36 2.32
300 395 3.317711 TGCGAACATTTTTCAGGTCACAT 59.682 39.130 0.00 0.00 0.00 3.21
304 399 6.434596 CGAACATTTTTCAGGTCACATACAA 58.565 36.000 0.00 0.00 0.00 2.41
306 401 7.594758 CGAACATTTTTCAGGTCACATACAATT 59.405 33.333 0.00 0.00 0.00 2.32
338 433 8.034058 ACTCCTGAAGATTTTTCGTATTTGAG 57.966 34.615 0.00 0.00 0.00 3.02
409 507 9.675464 AAAATCATGCACATTTATTCAAATCCT 57.325 25.926 6.00 0.00 31.82 3.24
411 509 8.882415 ATCATGCACATTTATTCAAATCCTTC 57.118 30.769 0.00 0.00 31.82 3.46
413 511 8.312564 TCATGCACATTTATTCAAATCCTTCAA 58.687 29.630 0.00 0.00 31.82 2.69
414 512 8.937884 CATGCACATTTATTCAAATCCTTCAAA 58.062 29.630 0.00 0.00 31.82 2.69
441 539 4.261801 GTGACTATTTTTCAGGCTAGCCA 58.738 43.478 34.70 13.55 38.92 4.75
456 554 2.592308 CCAGCCCACCTAAGGAGC 59.408 66.667 0.00 0.00 0.00 4.70
460 558 2.656069 GCCCACCTAAGGAGCGACA 61.656 63.158 0.00 0.00 0.00 4.35
472 570 3.291584 AGGAGCGACATGAGAGATGTAA 58.708 45.455 0.00 0.00 31.52 2.41
475 573 4.447054 GGAGCGACATGAGAGATGTAATTG 59.553 45.833 0.00 0.00 31.52 2.32
485 583 5.028549 AGAGATGTAATTGCAGGATCGTT 57.971 39.130 1.90 0.00 0.00 3.85
491 589 6.417191 TGTAATTGCAGGATCGTTACTTTC 57.583 37.500 0.00 0.00 0.00 2.62
493 591 2.396590 TGCAGGATCGTTACTTTCCC 57.603 50.000 0.00 0.00 0.00 3.97
498 596 1.205417 GGATCGTTACTTTCCCGGTGA 59.795 52.381 0.00 0.00 0.00 4.02
499 597 2.537401 GATCGTTACTTTCCCGGTGAG 58.463 52.381 0.00 0.00 0.00 3.51
531 629 2.746803 GCGTTCGATTTGGACCGGG 61.747 63.158 6.32 0.00 0.00 5.73
537 635 1.014352 CGATTTGGACCGGGAATGAC 58.986 55.000 6.32 0.00 0.00 3.06
538 636 1.677518 CGATTTGGACCGGGAATGACA 60.678 52.381 6.32 0.00 0.00 3.58
541 639 2.595750 TTGGACCGGGAATGACAAAT 57.404 45.000 6.32 0.00 0.00 2.32
558 656 1.967319 AATTCAGTGTGCCAACGACT 58.033 45.000 0.00 0.00 0.00 4.18
579 677 1.636003 AGGATTGGGAGTTGAGGGTTC 59.364 52.381 0.00 0.00 0.00 3.62
592 690 4.133013 TGAGGGTTCGATTTAGCTAACC 57.867 45.455 5.45 5.42 40.56 2.85
593 691 3.773119 TGAGGGTTCGATTTAGCTAACCT 59.227 43.478 5.45 7.46 40.98 3.50
594 692 4.142004 TGAGGGTTCGATTTAGCTAACCTC 60.142 45.833 21.63 21.63 40.98 3.85
595 693 4.031611 AGGGTTCGATTTAGCTAACCTCT 58.968 43.478 5.45 2.77 40.98 3.69
596 694 5.206587 AGGGTTCGATTTAGCTAACCTCTA 58.793 41.667 5.45 0.00 40.98 2.43
597 695 5.068855 AGGGTTCGATTTAGCTAACCTCTAC 59.931 44.000 5.45 7.10 40.98 2.59
598 696 5.163478 GGGTTCGATTTAGCTAACCTCTACA 60.163 44.000 5.45 0.00 40.98 2.74
601 699 7.169476 GGTTCGATTTAGCTAACCTCTACAATC 59.831 40.741 5.45 3.26 38.66 2.67
602 700 7.584122 TCGATTTAGCTAACCTCTACAATCT 57.416 36.000 5.45 0.00 0.00 2.40
603 701 8.008513 TCGATTTAGCTAACCTCTACAATCTT 57.991 34.615 5.45 0.00 0.00 2.40
604 702 8.136165 TCGATTTAGCTAACCTCTACAATCTTC 58.864 37.037 5.45 0.00 0.00 2.87
605 703 8.138712 CGATTTAGCTAACCTCTACAATCTTCT 58.861 37.037 5.45 0.00 0.00 2.85
610 708 8.596781 AGCTAACCTCTACAATCTTCTAAAGA 57.403 34.615 0.00 0.00 42.69 2.52
611 709 9.036980 AGCTAACCTCTACAATCTTCTAAAGAA 57.963 33.333 0.00 0.00 41.63 2.52
612 710 9.654663 GCTAACCTCTACAATCTTCTAAAGAAA 57.345 33.333 0.00 0.00 41.63 2.52
639 737 3.733709 CCTCTGCAGGTTCAAGGTT 57.266 52.632 15.13 0.00 34.60 3.50
640 738 1.986882 CCTCTGCAGGTTCAAGGTTT 58.013 50.000 15.13 0.00 34.60 3.27
641 739 3.140325 CCTCTGCAGGTTCAAGGTTTA 57.860 47.619 15.13 0.00 34.60 2.01
642 740 3.077359 CCTCTGCAGGTTCAAGGTTTAG 58.923 50.000 15.13 0.00 34.60 1.85
643 741 3.244561 CCTCTGCAGGTTCAAGGTTTAGA 60.245 47.826 15.13 0.00 34.60 2.10
644 742 4.389374 CTCTGCAGGTTCAAGGTTTAGAA 58.611 43.478 15.13 0.00 0.00 2.10
645 743 4.985538 TCTGCAGGTTCAAGGTTTAGAAT 58.014 39.130 15.13 0.00 0.00 2.40
646 744 4.761739 TCTGCAGGTTCAAGGTTTAGAATG 59.238 41.667 15.13 0.00 0.00 2.67
647 745 3.826157 TGCAGGTTCAAGGTTTAGAATGG 59.174 43.478 0.00 0.00 0.00 3.16
648 746 4.079253 GCAGGTTCAAGGTTTAGAATGGA 58.921 43.478 0.00 0.00 0.00 3.41
649 747 4.082733 GCAGGTTCAAGGTTTAGAATGGAC 60.083 45.833 0.00 0.00 0.00 4.02
650 748 4.459337 CAGGTTCAAGGTTTAGAATGGACC 59.541 45.833 0.00 0.00 41.05 4.46
670 768 8.185506 TGGACCTTTTCCTAAATAAAACCTTC 57.814 34.615 0.00 0.00 46.10 3.46
678 776 9.955208 TTTCCTAAATAAAACCTTCGAAAGTTC 57.045 29.630 12.35 0.00 0.00 3.01
714 1348 8.615878 TGCTAATAAAACTCGCCACATTATAT 57.384 30.769 0.00 0.00 0.00 0.86
715 1349 9.713713 TGCTAATAAAACTCGCCACATTATATA 57.286 29.630 0.00 0.00 0.00 0.86
720 1354 7.492352 AAAACTCGCCACATTATATAAGTCC 57.508 36.000 1.02 0.00 0.00 3.85
721 1355 5.148651 ACTCGCCACATTATATAAGTCCC 57.851 43.478 1.02 0.00 0.00 4.46
722 1356 4.838986 ACTCGCCACATTATATAAGTCCCT 59.161 41.667 1.02 0.00 0.00 4.20
747 1381 1.909700 AAACTCGCCACATTGATGGT 58.090 45.000 0.00 0.00 42.28 3.55
752 1386 1.210234 TCGCCACATTGATGGTCTCAT 59.790 47.619 0.00 0.00 42.28 2.90
820 1461 1.082104 GCACAAAAAGAGCGACGGG 60.082 57.895 0.00 0.00 0.00 5.28
821 1462 1.082104 CACAAAAAGAGCGACGGGC 60.082 57.895 0.00 0.00 44.05 6.13
1190 2086 5.879237 TCGTCTAAATGCATCATGTTTTCC 58.121 37.500 0.00 0.00 0.00 3.13
1213 2109 3.494626 CCCATGTTGTATGTATGCTCGTC 59.505 47.826 0.00 0.00 0.00 4.20
1321 2226 5.538118 TGTGTTCAGGTACAGTAGATGTTG 58.462 41.667 0.00 0.00 39.96 3.33
1458 2369 7.550906 GCTCAACCAGATTTACAAGATCTAAGT 59.449 37.037 0.00 0.29 32.75 2.24
1522 2439 3.326006 TCTGGATAAGCATGATCACCTCC 59.674 47.826 0.00 0.00 0.00 4.30
1534 2451 5.359194 TGATCACCTCCTCCAAATAAGTC 57.641 43.478 0.00 0.00 0.00 3.01
1626 2543 7.491372 GGGCAAAACCTTTAAATACTTGCTATC 59.509 37.037 17.02 7.14 38.17 2.08
1627 2544 8.032451 GGCAAAACCTTTAAATACTTGCTATCA 58.968 33.333 17.02 0.00 38.17 2.15
1628 2545 9.418045 GCAAAACCTTTAAATACTTGCTATCAA 57.582 29.630 13.16 0.00 35.85 2.57
1636 2553 2.997899 CTTGCTATCAAGGGCGGAG 58.002 57.895 0.00 0.00 44.53 4.63
1650 2567 1.153289 CGGAGCTTAGTGCATGGCT 60.153 57.895 0.00 0.00 45.94 4.75
1651 2568 1.434622 CGGAGCTTAGTGCATGGCTG 61.435 60.000 9.66 0.00 45.94 4.85
1652 2569 1.099879 GGAGCTTAGTGCATGGCTGG 61.100 60.000 9.66 0.00 45.94 4.85
1653 2570 1.077212 AGCTTAGTGCATGGCTGGG 60.077 57.895 0.00 0.00 45.94 4.45
1655 2572 1.454479 CTTAGTGCATGGCTGGGGG 60.454 63.158 0.00 0.00 0.00 5.40
1683 2600 4.537260 CCCCCAAGGATTTGCACA 57.463 55.556 0.00 0.00 38.24 4.57
1684 2601 2.995480 CCCCCAAGGATTTGCACAT 58.005 52.632 0.00 0.00 38.24 3.21
2095 3012 9.616156 TGTAATAAAACGGGATTGCTAAATCTA 57.384 29.630 0.00 0.00 41.74 1.98
2171 3088 6.266168 ACATGAAGATCCGTGCAAAATTTA 57.734 33.333 0.00 0.00 0.00 1.40
2299 3216 2.092103 AGTGGTTGTAAGGCTGGAACAA 60.092 45.455 6.31 6.31 38.70 2.83
2422 3340 2.226330 TCCTGTCAATGTCCAAAACGG 58.774 47.619 0.00 0.00 0.00 4.44
2423 3341 1.335872 CCTGTCAATGTCCAAAACGGC 60.336 52.381 0.00 0.00 33.14 5.68
2424 3342 1.336440 CTGTCAATGTCCAAAACGGCA 59.664 47.619 0.00 0.00 33.14 5.69
2425 3343 1.751351 TGTCAATGTCCAAAACGGCAA 59.249 42.857 0.00 0.00 33.14 4.52
2426 3344 2.166459 TGTCAATGTCCAAAACGGCAAA 59.834 40.909 0.00 0.00 33.14 3.68
2427 3345 3.190874 GTCAATGTCCAAAACGGCAAAA 58.809 40.909 0.00 0.00 33.14 2.44
2428 3346 3.000825 GTCAATGTCCAAAACGGCAAAAC 59.999 43.478 0.00 0.00 33.14 2.43
2429 3347 1.846541 ATGTCCAAAACGGCAAAACG 58.153 45.000 0.00 0.00 40.31 3.60
2430 3348 0.179134 TGTCCAAAACGGCAAAACGG 60.179 50.000 0.00 0.00 38.39 4.44
2445 3363 4.810491 GCAAAACGGCATCCATTTATGAAT 59.190 37.500 0.00 0.00 0.00 2.57
2535 3453 7.342284 ACCTAGCTAGCTTTTCATGACTAACTA 59.658 37.037 24.88 0.00 0.00 2.24
2879 3798 5.859205 AACAAGAGAAAACAAATCTGCCT 57.141 34.783 0.00 0.00 0.00 4.75
2897 3816 9.905713 AATCTGCCTATAGAAACAACTCAATAA 57.094 29.630 0.00 0.00 0.00 1.40
3093 4016 8.933653 ACAATTTATTATATTTGGGTGGGAAGG 58.066 33.333 0.00 0.00 0.00 3.46
3094 4017 8.374743 CAATTTATTATATTTGGGTGGGAAGGG 58.625 37.037 0.00 0.00 0.00 3.95
3095 4018 3.983533 TTATATTTGGGTGGGAAGGGG 57.016 47.619 0.00 0.00 0.00 4.79
3096 4019 0.941207 ATATTTGGGTGGGAAGGGGG 59.059 55.000 0.00 0.00 0.00 5.40
3149 4395 2.093921 TGTCACAGTTTCTGTCGGTTCA 60.094 45.455 0.00 0.00 43.43 3.18
3174 4420 0.538287 ACTTTTGGCCTGGAGAGTGC 60.538 55.000 3.32 0.00 0.00 4.40
3205 4451 4.037446 GGATAGCAACTGGTGAAAACAACA 59.963 41.667 0.00 0.00 0.00 3.33
3253 4499 9.056005 GTCACAGTATATTTCCAAATCATGCTA 57.944 33.333 0.00 0.00 0.00 3.49
3297 4543 4.020128 GCTACTCCCTCCGATCCAAAATAT 60.020 45.833 0.00 0.00 0.00 1.28
3303 4549 3.494626 CCTCCGATCCAAAATATGTGTCG 59.505 47.826 0.00 0.00 35.20 4.35
3336 4582 6.582677 AACCACGACATTTATTTTGGATCA 57.417 33.333 0.00 0.00 0.00 2.92
3402 4648 6.745450 GCACAATTGCTTTATACGTGTTATGT 59.255 34.615 5.05 0.00 46.17 2.29
3453 4699 4.486125 TTTAGATCACATGGCAGCTACA 57.514 40.909 0.00 0.00 0.00 2.74
3463 4709 1.486310 TGGCAGCTACAGTAGATTGGG 59.514 52.381 12.15 0.00 0.00 4.12
3482 4728 1.734465 GGAACAGGAGCATTCTGAACG 59.266 52.381 7.75 0.00 0.00 3.95
3573 4819 7.758076 TGCTATATCGAAAATATGACGGTTAGG 59.242 37.037 0.00 0.00 0.00 2.69
3679 4928 0.329596 AGTTTCCATGACCTCCCAGC 59.670 55.000 0.00 0.00 0.00 4.85
3704 4953 6.456795 AAGTTATGCCTGCTAGAAAAATCC 57.543 37.500 0.00 0.00 0.00 3.01
3715 4964 5.935206 TGCTAGAAAAATCCACGACACAATA 59.065 36.000 0.00 0.00 0.00 1.90
3729 4978 9.020813 CCACGACACAATATATATATGCTGTAC 57.979 37.037 6.00 5.40 0.00 2.90
4376 5916 4.986659 CCCAGAAATTGAACTTCAAAGCTG 59.013 41.667 8.28 13.71 40.12 4.24
4426 5970 4.528206 TCTCATGCTAGAGACAAACCAAGA 59.472 41.667 0.00 0.00 39.62 3.02
4429 5973 5.877012 TCATGCTAGAGACAAACCAAGAATC 59.123 40.000 0.00 0.00 0.00 2.52
4496 6041 0.400594 ACCTCTTTCCCCCAAGAACG 59.599 55.000 0.00 0.00 32.24 3.95
4540 6089 6.329197 AGCTACAAGGTAGCCCAGATTAATAA 59.671 38.462 21.17 0.00 41.25 1.40
4542 6091 7.665974 GCTACAAGGTAGCCCAGATTAATAAAT 59.334 37.037 15.66 0.00 34.65 1.40
4596 8201 7.589574 TGTGATGCAAAATTGAGAAATGATG 57.410 32.000 0.00 0.00 0.00 3.07
4924 8543 3.474600 TGGTGAAATGGTTGCAAAATGG 58.525 40.909 0.00 0.00 0.00 3.16
4952 8571 6.214412 AGAGACAATTTAGGGACACAAGAGAT 59.786 38.462 0.00 0.00 0.00 2.75
5266 9141 6.296145 GGAGGGAGATATCGAAGGATGAAATT 60.296 42.308 0.00 0.00 34.00 1.82
5381 9256 2.653890 TCGAAACAAGAGTTCGTACCG 58.346 47.619 6.47 0.00 36.84 4.02
5609 9566 1.560860 GGCACTGACAGACGAACAGC 61.561 60.000 10.08 1.54 35.38 4.40
5650 9607 2.583593 GTCATCGAGGCTGCGGAC 60.584 66.667 0.00 0.00 0.00 4.79
5689 9646 1.945394 GAGTGGGCAATGTATGAGCTG 59.055 52.381 0.00 0.00 0.00 4.24
5725 9699 1.402787 AACAGGCAAGTTTCCCACTG 58.597 50.000 0.00 0.00 35.12 3.66
5747 9724 2.301870 TGCGGTGGTTTGATCTAGTCTT 59.698 45.455 0.00 0.00 0.00 3.01
5748 9725 2.930682 GCGGTGGTTTGATCTAGTCTTC 59.069 50.000 0.00 0.00 0.00 2.87
5752 9729 5.336849 CGGTGGTTTGATCTAGTCTTCTCTT 60.337 44.000 0.00 0.00 0.00 2.85
6001 10007 0.172578 CGGCACTGAGGTAATCGACA 59.827 55.000 0.00 0.00 0.00 4.35
6003 10009 2.000447 GGCACTGAGGTAATCGACAAC 59.000 52.381 0.00 0.00 0.00 3.32
6006 10012 3.861131 GCACTGAGGTAATCGACAACACT 60.861 47.826 0.00 0.00 0.00 3.55
6011 10017 6.032956 TGAGGTAATCGACAACACTAACAT 57.967 37.500 0.00 0.00 0.00 2.71
6022 10028 9.425577 TCGACAACACTAACATATTATTTGTCA 57.574 29.630 10.70 0.00 0.00 3.58
6023 10029 9.689075 CGACAACACTAACATATTATTTGTCAG 57.311 33.333 10.70 0.00 0.00 3.51
6184 10264 1.984570 TGGAGGCCAGAGAGGTTCG 60.985 63.158 5.01 0.00 40.61 3.95
6357 10443 0.759436 ACGAGGACAAGGTGGACACT 60.759 55.000 2.13 0.00 0.00 3.55
6363 10449 0.034574 ACAAGGTGGACACTGTGCAA 60.035 50.000 7.90 0.00 35.32 4.08
6452 10541 6.680378 GCACTTTTGCTGTTCTTTAAAGAGGA 60.680 38.462 17.05 5.64 46.17 3.71
6453 10542 7.257722 CACTTTTGCTGTTCTTTAAAGAGGAA 58.742 34.615 17.05 11.01 36.22 3.36
6470 10559 6.089249 AGAGGAAAATTGGTAGTTTTGCTG 57.911 37.500 9.53 0.00 43.99 4.41
6471 10560 5.598417 AGAGGAAAATTGGTAGTTTTGCTGT 59.402 36.000 9.53 3.92 43.99 4.40
6472 10561 6.098266 AGAGGAAAATTGGTAGTTTTGCTGTT 59.902 34.615 9.53 0.00 43.99 3.16
6473 10562 6.048509 AGGAAAATTGGTAGTTTTGCTGTTG 58.951 36.000 4.87 0.00 42.89 3.33
6474 10563 5.236263 GGAAAATTGGTAGTTTTGCTGTTGG 59.764 40.000 0.00 0.00 35.05 3.77
6475 10564 5.351948 AAATTGGTAGTTTTGCTGTTGGT 57.648 34.783 0.00 0.00 0.00 3.67
6476 10565 6.472686 AAATTGGTAGTTTTGCTGTTGGTA 57.527 33.333 0.00 0.00 0.00 3.25
6477 10566 6.472686 AATTGGTAGTTTTGCTGTTGGTAA 57.527 33.333 0.00 0.00 0.00 2.85
6478 10567 6.664428 ATTGGTAGTTTTGCTGTTGGTAAT 57.336 33.333 0.00 0.00 0.00 1.89
6479 10568 5.446143 TGGTAGTTTTGCTGTTGGTAATG 57.554 39.130 0.00 0.00 0.00 1.90
6480 10569 5.133941 TGGTAGTTTTGCTGTTGGTAATGA 58.866 37.500 0.00 0.00 0.00 2.57
6481 10570 5.594725 TGGTAGTTTTGCTGTTGGTAATGAA 59.405 36.000 0.00 0.00 0.00 2.57
6482 10571 6.149633 GGTAGTTTTGCTGTTGGTAATGAAG 58.850 40.000 0.00 0.00 0.00 3.02
6483 10572 5.852282 AGTTTTGCTGTTGGTAATGAAGT 57.148 34.783 0.00 0.00 0.00 3.01
6484 10573 5.591099 AGTTTTGCTGTTGGTAATGAAGTG 58.409 37.500 0.00 0.00 0.00 3.16
6485 10574 5.127031 AGTTTTGCTGTTGGTAATGAAGTGT 59.873 36.000 0.00 0.00 0.00 3.55
6486 10575 4.566545 TTGCTGTTGGTAATGAAGTGTG 57.433 40.909 0.00 0.00 0.00 3.82
6487 10576 3.550820 TGCTGTTGGTAATGAAGTGTGT 58.449 40.909 0.00 0.00 0.00 3.72
6488 10577 4.709250 TGCTGTTGGTAATGAAGTGTGTA 58.291 39.130 0.00 0.00 0.00 2.90
6489 10578 5.126779 TGCTGTTGGTAATGAAGTGTGTAA 58.873 37.500 0.00 0.00 0.00 2.41
6490 10579 5.590663 TGCTGTTGGTAATGAAGTGTGTAAA 59.409 36.000 0.00 0.00 0.00 2.01
6491 10580 6.095580 TGCTGTTGGTAATGAAGTGTGTAAAA 59.904 34.615 0.00 0.00 0.00 1.52
6492 10581 7.145323 GCTGTTGGTAATGAAGTGTGTAAAAT 58.855 34.615 0.00 0.00 0.00 1.82
6493 10582 7.651704 GCTGTTGGTAATGAAGTGTGTAAAATT 59.348 33.333 0.00 0.00 0.00 1.82
6495 10584 9.953697 TGTTGGTAATGAAGTGTGTAAAATTAC 57.046 29.630 0.00 0.00 0.00 1.89
6496 10585 9.109533 GTTGGTAATGAAGTGTGTAAAATTACG 57.890 33.333 0.00 0.00 36.45 3.18
6497 10586 8.604640 TGGTAATGAAGTGTGTAAAATTACGA 57.395 30.769 0.00 0.00 36.45 3.43
6498 10587 9.053840 TGGTAATGAAGTGTGTAAAATTACGAA 57.946 29.630 0.00 0.00 36.45 3.85
6502 10591 8.964420 ATGAAGTGTGTAAAATTACGAATTGG 57.036 30.769 0.00 0.00 36.45 3.16
6503 10592 6.858993 TGAAGTGTGTAAAATTACGAATTGGC 59.141 34.615 0.00 0.00 36.45 4.52
6504 10593 5.705902 AGTGTGTAAAATTACGAATTGGCC 58.294 37.500 0.00 0.00 36.45 5.36
6505 10594 4.555747 GTGTGTAAAATTACGAATTGGCCG 59.444 41.667 0.00 0.00 36.45 6.13
6506 10595 4.215827 TGTGTAAAATTACGAATTGGCCGT 59.784 37.500 0.00 0.00 43.26 5.68
6507 10596 4.555747 GTGTAAAATTACGAATTGGCCGTG 59.444 41.667 0.00 0.00 40.76 4.94
6508 10597 2.271821 AAATTACGAATTGGCCGTGC 57.728 45.000 0.00 0.00 40.76 5.34
6509 10598 1.459450 AATTACGAATTGGCCGTGCT 58.541 45.000 0.00 0.00 40.76 4.40
6521 10610 0.793250 GCCGTGCTCTTCAGAACTTC 59.207 55.000 0.00 0.00 0.00 3.01
6523 10612 1.603172 CCGTGCTCTTCAGAACTTCGT 60.603 52.381 0.00 0.00 0.00 3.85
6543 10632 3.061797 CGTCAAACAAGATCGATCGTAGC 60.062 47.826 19.33 4.87 0.00 3.58
6547 10636 3.990318 ACAAGATCGATCGTAGCATGA 57.010 42.857 19.33 0.00 0.00 3.07
6548 10637 4.511617 ACAAGATCGATCGTAGCATGAT 57.488 40.909 19.33 0.00 0.00 2.45
6549 10638 5.629079 ACAAGATCGATCGTAGCATGATA 57.371 39.130 19.33 0.00 0.00 2.15
6550 10639 6.201226 ACAAGATCGATCGTAGCATGATAT 57.799 37.500 19.33 0.00 0.00 1.63
6551 10640 7.321745 ACAAGATCGATCGTAGCATGATATA 57.678 36.000 19.33 0.00 0.00 0.86
6552 10641 7.935520 ACAAGATCGATCGTAGCATGATATAT 58.064 34.615 19.33 0.00 0.00 0.86
6554 10643 9.884465 CAAGATCGATCGTAGCATGATATATAA 57.116 33.333 19.33 0.00 0.00 0.98
6555 10644 9.885934 AAGATCGATCGTAGCATGATATATAAC 57.114 33.333 19.33 0.00 0.00 1.89
6556 10645 8.224437 AGATCGATCGTAGCATGATATATAACG 58.776 37.037 19.33 0.00 0.00 3.18
6557 10646 6.656003 TCGATCGTAGCATGATATATAACGG 58.344 40.000 15.94 0.00 0.00 4.44
6574 10663 8.779354 ATATAACGGATAAAGATTTGCTCTCC 57.221 34.615 0.00 0.00 31.03 3.71
6580 10669 6.118852 GGATAAAGATTTGCTCTCCTGAAGT 58.881 40.000 0.00 0.00 31.03 3.01
6596 10685 8.195436 TCTCCTGAAGTGTATAACGAATAAAGG 58.805 37.037 0.00 0.00 0.00 3.11
6597 10686 6.759827 TCCTGAAGTGTATAACGAATAAAGGC 59.240 38.462 0.00 0.00 0.00 4.35
6604 10693 7.767198 AGTGTATAACGAATAAAGGCTTGCTTA 59.233 33.333 0.00 0.00 0.00 3.09
6617 10706 6.212888 AGGCTTGCTTACCTGAATAATTTG 57.787 37.500 0.00 0.00 34.07 2.32
6647 10736 4.081087 TGTTCAGTTGGCCTAGGATTAGTC 60.081 45.833 14.75 0.00 0.00 2.59
6649 10738 1.413077 AGTTGGCCTAGGATTAGTCGC 59.587 52.381 14.75 0.00 0.00 5.19
6661 10750 8.129211 CCTAGGATTAGTCGCTTTTTATTTTGG 58.871 37.037 1.05 0.00 0.00 3.28
6693 10782 3.451141 AAAGAATTTTCTGCGTGCCAA 57.549 38.095 0.00 0.00 31.62 4.52
6694 10783 2.422276 AGAATTTTCTGCGTGCCAAC 57.578 45.000 0.00 0.00 35.89 3.77
6697 10786 0.968405 ATTTTCTGCGTGCCAACCAT 59.032 45.000 0.00 0.00 0.00 3.55
6699 10788 1.610363 TTTCTGCGTGCCAACCATTA 58.390 45.000 0.00 0.00 0.00 1.90
6701 10790 0.250510 TCTGCGTGCCAACCATTACA 60.251 50.000 0.00 0.00 0.00 2.41
6707 10796 1.211709 GCCAACCATTACACACGGC 59.788 57.895 0.00 0.00 0.00 5.68
6754 10843 2.286418 GCAGTATTCACGCCATAAGCAC 60.286 50.000 0.00 0.00 44.04 4.40
6764 10853 1.068610 GCCATAAGCACGCAACAAAGA 60.069 47.619 0.00 0.00 42.97 2.52
6782 10871 6.108015 ACAAAGAAATGAAGCAACACATGTT 58.892 32.000 0.00 0.00 39.12 2.71
6794 10883 4.439426 GCAACACATGTTAACAACTGGACA 60.439 41.667 13.23 0.00 36.32 4.02
6799 10889 2.870175 TGTTAACAACTGGACATGGGG 58.130 47.619 5.64 0.00 0.00 4.96
6801 10891 0.774276 TAACAACTGGACATGGGGCA 59.226 50.000 0.00 0.00 0.00 5.36
6805 10895 1.136329 AACTGGACATGGGGCACTCT 61.136 55.000 0.00 0.00 0.00 3.24
6813 10903 3.384168 ACATGGGGCACTCTTAGTCATA 58.616 45.455 0.00 0.00 0.00 2.15
6816 10906 2.766263 TGGGGCACTCTTAGTCATACAG 59.234 50.000 0.00 0.00 0.00 2.74
6820 10910 3.491792 GGCACTCTTAGTCATACAGAGGC 60.492 52.174 0.00 0.00 38.76 4.70
6821 10911 3.491792 GCACTCTTAGTCATACAGAGGCC 60.492 52.174 0.00 0.00 38.76 5.19
6822 10912 3.701542 CACTCTTAGTCATACAGAGGCCA 59.298 47.826 5.01 0.00 38.76 5.36
6841 10931 2.424601 CCAAGTGTATGCCACCTCATTG 59.575 50.000 0.00 0.00 45.74 2.82
6843 10933 3.439857 AGTGTATGCCACCTCATTGTT 57.560 42.857 0.00 0.00 45.74 2.83
6850 10940 6.887002 TGTATGCCACCTCATTGTTATTTGTA 59.113 34.615 0.00 0.00 0.00 2.41
6879 10969 9.606631 CTTTTGATGCTATATTATACTCCCTCC 57.393 37.037 0.00 0.00 0.00 4.30
6880 10970 6.961360 TGATGCTATATTATACTCCCTCCG 57.039 41.667 0.00 0.00 0.00 4.63
6881 10971 6.432581 TGATGCTATATTATACTCCCTCCGT 58.567 40.000 0.00 0.00 0.00 4.69
6882 10972 6.895756 TGATGCTATATTATACTCCCTCCGTT 59.104 38.462 0.00 0.00 0.00 4.44
6883 10973 8.057011 TGATGCTATATTATACTCCCTCCGTTA 58.943 37.037 0.00 0.00 0.00 3.18
6884 10974 9.080097 GATGCTATATTATACTCCCTCCGTTAT 57.920 37.037 0.00 0.00 0.00 1.89
6885 10975 8.834004 TGCTATATTATACTCCCTCCGTTATT 57.166 34.615 0.00 0.00 0.00 1.40
6886 10976 9.263446 TGCTATATTATACTCCCTCCGTTATTT 57.737 33.333 0.00 0.00 0.00 1.40
6891 10981 8.848474 ATTATACTCCCTCCGTTATTTTGATG 57.152 34.615 0.00 0.00 0.00 3.07
6892 10982 3.886123 ACTCCCTCCGTTATTTTGATGG 58.114 45.455 0.00 0.00 0.00 3.51
6893 10983 3.521937 ACTCCCTCCGTTATTTTGATGGA 59.478 43.478 0.00 0.00 0.00 3.41
6894 10984 4.018779 ACTCCCTCCGTTATTTTGATGGAA 60.019 41.667 0.00 0.00 32.04 3.53
6895 10985 4.266714 TCCCTCCGTTATTTTGATGGAAC 58.733 43.478 0.00 0.00 32.04 3.62
6896 10986 3.064820 CCCTCCGTTATTTTGATGGAACG 59.935 47.826 0.00 0.00 43.21 3.95
6901 10991 5.539582 CGTTATTTTGATGGAACGGAAGA 57.460 39.130 0.00 0.00 40.64 2.87
6902 10992 5.933790 CGTTATTTTGATGGAACGGAAGAA 58.066 37.500 0.00 0.00 40.64 2.52
6903 10993 6.021596 CGTTATTTTGATGGAACGGAAGAAG 58.978 40.000 0.00 0.00 40.64 2.85
6904 10994 6.348213 CGTTATTTTGATGGAACGGAAGAAGT 60.348 38.462 0.00 0.00 40.64 3.01
6905 10995 7.148540 CGTTATTTTGATGGAACGGAAGAAGTA 60.149 37.037 0.00 0.00 40.64 2.24
6906 10996 8.508875 GTTATTTTGATGGAACGGAAGAAGTAA 58.491 33.333 0.00 0.00 0.00 2.24
6907 10997 6.554334 TTTTGATGGAACGGAAGAAGTAAG 57.446 37.500 0.00 0.00 0.00 2.34
6908 10998 4.884668 TGATGGAACGGAAGAAGTAAGT 57.115 40.909 0.00 0.00 0.00 2.24
6909 10999 5.223449 TGATGGAACGGAAGAAGTAAGTT 57.777 39.130 0.00 0.00 0.00 2.66
6910 11000 6.349243 TGATGGAACGGAAGAAGTAAGTTA 57.651 37.500 0.00 0.00 0.00 2.24
6911 11001 6.761312 TGATGGAACGGAAGAAGTAAGTTAA 58.239 36.000 0.00 0.00 0.00 2.01
6912 11002 7.391620 TGATGGAACGGAAGAAGTAAGTTAAT 58.608 34.615 0.00 0.00 0.00 1.40
7002 11093 9.508567 GTTTTATTGATAGAAGAAGTCAATGCC 57.491 33.333 9.40 0.00 41.31 4.40
7003 11094 8.806429 TTTATTGATAGAAGAAGTCAATGCCA 57.194 30.769 9.40 0.00 41.31 4.92
7004 11095 8.985315 TTATTGATAGAAGAAGTCAATGCCAT 57.015 30.769 9.40 0.00 41.31 4.40
7006 11097 8.618702 ATTGATAGAAGAAGTCAATGCCATAG 57.381 34.615 0.00 0.00 40.13 2.23
7007 11098 7.365497 TGATAGAAGAAGTCAATGCCATAGA 57.635 36.000 0.00 0.00 0.00 1.98
7008 11099 7.795047 TGATAGAAGAAGTCAATGCCATAGAA 58.205 34.615 0.00 0.00 0.00 2.10
7009 11100 7.712639 TGATAGAAGAAGTCAATGCCATAGAAC 59.287 37.037 0.00 0.00 0.00 3.01
7010 11101 4.872691 AGAAGAAGTCAATGCCATAGAACG 59.127 41.667 0.00 0.00 0.00 3.95
7011 11102 4.207891 AGAAGTCAATGCCATAGAACGT 57.792 40.909 0.00 0.00 0.00 3.99
7012 11103 4.184629 AGAAGTCAATGCCATAGAACGTC 58.815 43.478 0.00 0.00 0.00 4.34
7013 11104 3.610040 AGTCAATGCCATAGAACGTCA 57.390 42.857 0.00 0.00 0.00 4.35
7014 11105 4.142609 AGTCAATGCCATAGAACGTCAT 57.857 40.909 0.00 0.00 0.00 3.06
7015 11106 3.873361 AGTCAATGCCATAGAACGTCATG 59.127 43.478 0.00 0.00 0.00 3.07
7016 11107 3.871006 GTCAATGCCATAGAACGTCATGA 59.129 43.478 0.00 0.00 0.00 3.07
7017 11108 4.512944 GTCAATGCCATAGAACGTCATGAT 59.487 41.667 0.00 0.00 0.00 2.45
7018 11109 5.008019 GTCAATGCCATAGAACGTCATGATT 59.992 40.000 0.00 0.00 0.00 2.57
7019 11110 5.237127 TCAATGCCATAGAACGTCATGATTC 59.763 40.000 0.00 0.00 0.00 2.52
7020 11111 4.406648 TGCCATAGAACGTCATGATTCT 57.593 40.909 14.40 14.40 38.67 2.40
7021 11112 4.769688 TGCCATAGAACGTCATGATTCTT 58.230 39.130 15.03 0.28 36.56 2.52
7022 11113 4.571984 TGCCATAGAACGTCATGATTCTTG 59.428 41.667 15.03 12.53 36.56 3.02
7023 11114 4.572389 GCCATAGAACGTCATGATTCTTGT 59.428 41.667 15.03 4.50 36.56 3.16
7024 11115 5.753438 GCCATAGAACGTCATGATTCTTGTA 59.247 40.000 15.03 3.82 36.56 2.41
7025 11116 6.425114 GCCATAGAACGTCATGATTCTTGTAT 59.575 38.462 15.03 5.65 36.56 2.29
7026 11117 7.570140 GCCATAGAACGTCATGATTCTTGTATG 60.570 40.741 15.03 14.54 36.56 2.39
7027 11118 5.725110 AGAACGTCATGATTCTTGTATGC 57.275 39.130 5.85 0.00 30.88 3.14
7028 11119 5.178061 AGAACGTCATGATTCTTGTATGCA 58.822 37.500 5.85 0.00 30.88 3.96
7029 11120 5.292834 AGAACGTCATGATTCTTGTATGCAG 59.707 40.000 5.85 0.00 30.88 4.41
7030 11121 4.758688 ACGTCATGATTCTTGTATGCAGA 58.241 39.130 0.00 0.00 0.00 4.26
7031 11122 5.178061 ACGTCATGATTCTTGTATGCAGAA 58.822 37.500 0.00 0.00 0.00 3.02
7032 11123 5.063944 ACGTCATGATTCTTGTATGCAGAAC 59.936 40.000 0.00 0.00 0.00 3.01
7033 11124 5.063817 CGTCATGATTCTTGTATGCAGAACA 59.936 40.000 0.00 0.70 0.00 3.18
7034 11125 6.238293 CGTCATGATTCTTGTATGCAGAACAT 60.238 38.462 0.00 1.68 43.18 2.71
7035 11126 7.478322 GTCATGATTCTTGTATGCAGAACATT 58.522 34.615 0.00 0.00 40.38 2.71
7036 11127 7.972277 GTCATGATTCTTGTATGCAGAACATTT 59.028 33.333 0.00 0.00 40.38 2.32
7037 11128 8.525316 TCATGATTCTTGTATGCAGAACATTTT 58.475 29.630 5.58 0.00 40.38 1.82
7038 11129 9.146984 CATGATTCTTGTATGCAGAACATTTTT 57.853 29.630 5.58 0.00 40.38 1.94
7039 11130 8.523523 TGATTCTTGTATGCAGAACATTTTTG 57.476 30.769 5.58 0.00 40.38 2.44
7040 11131 8.143193 TGATTCTTGTATGCAGAACATTTTTGT 58.857 29.630 5.58 0.00 40.38 2.83
7041 11132 7.928908 TTCTTGTATGCAGAACATTTTTGTC 57.071 32.000 5.58 0.00 40.38 3.18
7042 11133 7.036996 TCTTGTATGCAGAACATTTTTGTCA 57.963 32.000 5.58 0.00 40.38 3.58
7043 11134 7.140705 TCTTGTATGCAGAACATTTTTGTCAG 58.859 34.615 5.58 0.00 40.38 3.51
7044 11135 6.389830 TGTATGCAGAACATTTTTGTCAGT 57.610 33.333 0.70 0.00 40.38 3.41
7045 11136 6.207928 TGTATGCAGAACATTTTTGTCAGTG 58.792 36.000 0.70 0.00 40.38 3.66
7046 11137 4.717233 TGCAGAACATTTTTGTCAGTGT 57.283 36.364 0.00 0.00 0.00 3.55
7047 11138 4.422840 TGCAGAACATTTTTGTCAGTGTG 58.577 39.130 0.00 0.00 0.00 3.82
7048 11139 4.157472 TGCAGAACATTTTTGTCAGTGTGA 59.843 37.500 0.00 0.00 0.00 3.58
7049 11140 7.171502 ATGCAGAACATTTTTGTCAGTGTGAC 61.172 38.462 0.00 0.00 41.17 3.67
7050 11141 5.036737 CAGAACATTTTTGTCAGTGTGACC 58.963 41.667 4.65 0.00 46.40 4.02
7051 11142 4.097892 AGAACATTTTTGTCAGTGTGACCC 59.902 41.667 4.65 0.00 46.40 4.46
7052 11143 2.357637 ACATTTTTGTCAGTGTGACCCG 59.642 45.455 4.65 0.00 46.40 5.28
7053 11144 2.116827 TTTTTGTCAGTGTGACCCGT 57.883 45.000 4.65 0.00 46.40 5.28
7054 11145 1.374560 TTTTGTCAGTGTGACCCGTG 58.625 50.000 4.65 0.00 46.40 4.94
7055 11146 0.462937 TTTGTCAGTGTGACCCGTGG 60.463 55.000 4.65 0.00 46.40 4.94
7056 11147 2.030562 GTCAGTGTGACCCGTGGG 59.969 66.667 2.58 2.58 41.37 4.61
7066 11157 4.954933 CCCGTGGGTGAAATCGAT 57.045 55.556 0.00 0.00 0.00 3.59
7121 11212 4.096382 CAGCCATTGCCGTCTAAAAATACT 59.904 41.667 0.00 0.00 38.69 2.12
7187 11279 1.364626 GATGTGAGCGAGGTTGGCAG 61.365 60.000 0.00 0.00 0.00 4.85
7217 11309 1.173913 GCAGGCGTATCCCAAACTTT 58.826 50.000 0.00 0.00 34.51 2.66
7242 11334 5.278266 GGCAATAGCACTCTAGTCTAGTCTG 60.278 48.000 6.77 4.85 44.61 3.51
7243 11335 5.529430 GCAATAGCACTCTAGTCTAGTCTGA 59.471 44.000 6.77 0.00 41.58 3.27
7244 11336 6.038825 GCAATAGCACTCTAGTCTAGTCTGAA 59.961 42.308 6.77 0.00 41.58 3.02
7245 11337 7.415765 GCAATAGCACTCTAGTCTAGTCTGAAA 60.416 40.741 6.77 0.00 41.58 2.69
7246 11338 5.890424 AGCACTCTAGTCTAGTCTGAAAC 57.110 43.478 6.77 0.00 0.00 2.78
7247 11339 4.703093 AGCACTCTAGTCTAGTCTGAAACC 59.297 45.833 6.77 0.00 0.00 3.27
7248 11340 4.459685 GCACTCTAGTCTAGTCTGAAACCA 59.540 45.833 6.77 0.00 0.00 3.67
7249 11341 5.392595 GCACTCTAGTCTAGTCTGAAACCAG 60.393 48.000 6.77 0.00 0.00 4.00
7250 11342 5.941058 CACTCTAGTCTAGTCTGAAACCAGA 59.059 44.000 6.77 0.00 38.28 3.86
7251 11343 6.093495 CACTCTAGTCTAGTCTGAAACCAGAG 59.907 46.154 6.77 9.36 40.99 3.35
7252 11344 5.502079 TCTAGTCTAGTCTGAAACCAGAGG 58.498 45.833 6.77 0.00 40.99 3.69
7253 11345 2.829120 AGTCTAGTCTGAAACCAGAGGC 59.171 50.000 0.00 0.00 40.99 4.70
7254 11346 2.563179 GTCTAGTCTGAAACCAGAGGCA 59.437 50.000 0.00 0.00 40.99 4.75
7255 11347 2.563179 TCTAGTCTGAAACCAGAGGCAC 59.437 50.000 0.00 0.00 40.99 5.01
7256 11348 1.131638 AGTCTGAAACCAGAGGCACA 58.868 50.000 0.00 0.00 40.99 4.57
7257 11349 1.202698 AGTCTGAAACCAGAGGCACAC 60.203 52.381 0.00 0.00 40.99 3.82
7258 11350 0.108585 TCTGAAACCAGAGGCACACC 59.891 55.000 0.00 0.00 35.88 4.16
7259 11351 0.179020 CTGAAACCAGAGGCACACCA 60.179 55.000 0.00 0.00 39.06 4.17
7260 11352 0.257328 TGAAACCAGAGGCACACCAA 59.743 50.000 0.00 0.00 39.06 3.67
7261 11353 1.341482 TGAAACCAGAGGCACACCAAA 60.341 47.619 0.00 0.00 39.06 3.28
7262 11354 1.067060 GAAACCAGAGGCACACCAAAC 59.933 52.381 0.00 0.00 39.06 2.93
7263 11355 1.101049 AACCAGAGGCACACCAAACG 61.101 55.000 0.00 0.00 39.06 3.60
7264 11356 1.525995 CCAGAGGCACACCAAACGT 60.526 57.895 0.00 0.00 39.06 3.99
7265 11357 1.101049 CCAGAGGCACACCAAACGTT 61.101 55.000 0.00 0.00 39.06 3.99
7266 11358 0.307760 CAGAGGCACACCAAACGTTC 59.692 55.000 0.00 0.00 39.06 3.95
7319 11411 4.498009 GCAGCTTGTTTCAGAGCAAGTTTA 60.498 41.667 14.52 0.00 43.56 2.01
7333 11425 7.010923 CAGAGCAAGTTTAATAGTAGAGCCAAG 59.989 40.741 0.00 0.00 0.00 3.61
7334 11426 6.712276 AGCAAGTTTAATAGTAGAGCCAAGT 58.288 36.000 0.00 0.00 0.00 3.16
7335 11427 6.595716 AGCAAGTTTAATAGTAGAGCCAAGTG 59.404 38.462 0.00 0.00 0.00 3.16
7336 11428 6.594159 GCAAGTTTAATAGTAGAGCCAAGTGA 59.406 38.462 0.00 0.00 0.00 3.41
7337 11429 7.281100 GCAAGTTTAATAGTAGAGCCAAGTGAT 59.719 37.037 0.00 0.00 0.00 3.06
7338 11430 8.607459 CAAGTTTAATAGTAGAGCCAAGTGATG 58.393 37.037 0.00 0.00 0.00 3.07
7352 11444 6.369059 CCAAGTGATGGCTATAAGTTCTTG 57.631 41.667 0.00 0.00 43.80 3.02
7353 11445 5.220931 CCAAGTGATGGCTATAAGTTCTTGC 60.221 44.000 0.00 0.00 43.80 4.01
7354 11446 4.455606 AGTGATGGCTATAAGTTCTTGCC 58.544 43.478 6.75 6.75 43.49 4.52
7359 11451 4.820284 GGCTATAAGTTCTTGCCATGTC 57.180 45.455 8.50 0.00 42.79 3.06
7360 11452 4.199310 GGCTATAAGTTCTTGCCATGTCA 58.801 43.478 8.50 0.00 42.79 3.58
7361 11453 4.823989 GGCTATAAGTTCTTGCCATGTCAT 59.176 41.667 8.50 0.00 42.79 3.06
7362 11454 5.049129 GGCTATAAGTTCTTGCCATGTCATC 60.049 44.000 8.50 0.00 42.79 2.92
7363 11455 5.762218 GCTATAAGTTCTTGCCATGTCATCT 59.238 40.000 0.00 0.00 0.00 2.90
7364 11456 6.931281 GCTATAAGTTCTTGCCATGTCATCTA 59.069 38.462 0.00 0.00 0.00 1.98
7365 11457 7.605691 GCTATAAGTTCTTGCCATGTCATCTAT 59.394 37.037 0.00 0.00 0.00 1.98
7368 11460 5.303971 AGTTCTTGCCATGTCATCTATAGC 58.696 41.667 0.00 0.00 0.00 2.97
7369 11461 4.961438 TCTTGCCATGTCATCTATAGCA 57.039 40.909 0.00 0.00 0.00 3.49
7370 11462 5.294734 TCTTGCCATGTCATCTATAGCAA 57.705 39.130 0.00 0.00 37.24 3.91
7371 11463 5.608676 CTTGCCATGTCATCTATAGCAAG 57.391 43.478 11.38 11.38 46.54 4.01
7372 11464 4.694760 TGCCATGTCATCTATAGCAAGT 57.305 40.909 0.00 0.00 0.00 3.16
7373 11465 5.039920 TGCCATGTCATCTATAGCAAGTT 57.960 39.130 0.00 0.00 0.00 2.66
7374 11466 5.439721 TGCCATGTCATCTATAGCAAGTTT 58.560 37.500 0.00 0.00 0.00 2.66
7375 11467 5.887598 TGCCATGTCATCTATAGCAAGTTTT 59.112 36.000 0.00 0.00 0.00 2.43
7376 11468 7.053498 TGCCATGTCATCTATAGCAAGTTTTA 58.947 34.615 0.00 0.00 0.00 1.52
7377 11469 7.720957 TGCCATGTCATCTATAGCAAGTTTTAT 59.279 33.333 0.00 0.00 0.00 1.40
7378 11470 9.219603 GCCATGTCATCTATAGCAAGTTTTATA 57.780 33.333 0.00 0.00 0.00 0.98
7408 11500 8.970859 AGTTAGCTATGAAGATGTGCTATTTT 57.029 30.769 0.00 0.00 36.34 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 9.649167 GGAAAAATGATCATGAACTGATTTTCT 57.351 29.630 24.65 12.89 44.83 2.52
48 49 8.589629 CGGAAAAATGATCATGAACTGATTTTC 58.410 33.333 20.98 20.98 44.83 2.29
61 62 6.832520 TTCAGGAATTCGGAAAAATGATCA 57.167 33.333 0.00 0.00 0.00 2.92
118 119 8.628630 TTTTTCAGGAGTTTGGAAAAATGTTT 57.371 26.923 7.26 0.00 42.37 2.83
166 261 6.956299 AATTTGAGAAAATGCTCGGAAATG 57.044 33.333 0.00 0.00 37.73 2.32
203 298 3.383185 AGGAGTTTGGAAAAATGTTCGCA 59.617 39.130 0.00 0.00 0.00 5.10
215 310 8.801882 ATACGAAAAATATTCAGGAGTTTGGA 57.198 30.769 0.00 0.00 0.00 3.53
271 366 7.967854 TGACCTGAAAAATGTTCGCAAATATAG 59.032 33.333 0.00 0.00 0.00 1.31
272 367 7.753132 GTGACCTGAAAAATGTTCGCAAATATA 59.247 33.333 0.00 0.00 0.00 0.86
278 373 2.685388 TGTGACCTGAAAAATGTTCGCA 59.315 40.909 0.00 0.00 0.00 5.10
283 378 9.260002 GAAAATTGTATGTGACCTGAAAAATGT 57.740 29.630 0.00 0.00 0.00 2.71
304 399 9.899226 CGAAAAATCTTCAGGAGTTTAGAAAAT 57.101 29.630 0.00 0.00 40.67 1.82
306 401 8.446599 ACGAAAAATCTTCAGGAGTTTAGAAA 57.553 30.769 0.00 0.00 40.67 2.52
313 408 7.878127 TCTCAAATACGAAAAATCTTCAGGAGT 59.122 33.333 0.00 0.00 0.00 3.85
413 511 7.814587 GCTAGCCTGAAAAATAGTCACATTTTT 59.185 33.333 2.29 9.21 45.95 1.94
414 512 7.315890 GCTAGCCTGAAAAATAGTCACATTTT 58.684 34.615 2.29 0.00 39.26 1.82
441 539 2.038975 TCGCTCCTTAGGTGGGCT 59.961 61.111 11.77 0.00 0.00 5.19
456 554 4.210746 CCTGCAATTACATCTCTCATGTCG 59.789 45.833 0.00 0.00 33.76 4.35
460 558 5.221601 ACGATCCTGCAATTACATCTCTCAT 60.222 40.000 0.00 0.00 0.00 2.90
472 570 3.279434 GGGAAAGTAACGATCCTGCAAT 58.721 45.455 0.00 0.00 33.61 3.56
475 573 1.287425 CGGGAAAGTAACGATCCTGC 58.713 55.000 0.00 0.00 33.13 4.85
498 596 2.740055 CGCTTGAGCTGTTCGGCT 60.740 61.111 5.79 5.79 46.11 5.52
499 597 2.500183 GAACGCTTGAGCTGTTCGGC 62.500 60.000 17.82 0.00 41.05 5.54
502 600 1.071605 ATCGAACGCTTGAGCTGTTC 58.928 50.000 20.44 20.44 43.76 3.18
506 604 0.798776 CCAAATCGAACGCTTGAGCT 59.201 50.000 1.07 0.00 39.32 4.09
507 605 0.796312 TCCAAATCGAACGCTTGAGC 59.204 50.000 0.00 0.00 37.78 4.26
514 612 0.671163 TTCCCGGTCCAAATCGAACG 60.671 55.000 0.00 0.00 42.69 3.95
518 616 1.014352 GTCATTCCCGGTCCAAATCG 58.986 55.000 0.00 0.00 0.00 3.34
531 629 4.241590 TGGCACACTGAATTTGTCATTC 57.758 40.909 0.00 0.00 35.07 2.67
537 635 2.033299 AGTCGTTGGCACACTGAATTTG 59.967 45.455 0.00 0.00 39.29 2.32
538 636 2.297701 AGTCGTTGGCACACTGAATTT 58.702 42.857 0.00 0.00 39.29 1.82
541 639 1.270094 CCTAGTCGTTGGCACACTGAA 60.270 52.381 3.71 0.00 39.29 3.02
558 656 2.661176 ACCCTCAACTCCCAATCCTA 57.339 50.000 0.00 0.00 0.00 2.94
579 677 8.138712 AGAAGATTGTAGAGGTTAGCTAAATCG 58.861 37.037 7.99 0.00 0.00 3.34
621 719 1.986882 AAACCTTGAACCTGCAGAGG 58.013 50.000 17.39 16.02 46.21 3.69
622 720 4.008074 TCTAAACCTTGAACCTGCAGAG 57.992 45.455 17.39 8.04 0.00 3.35
623 721 4.431416 TTCTAAACCTTGAACCTGCAGA 57.569 40.909 17.39 0.00 0.00 4.26
624 722 4.082571 CCATTCTAAACCTTGAACCTGCAG 60.083 45.833 6.78 6.78 0.00 4.41
625 723 3.826157 CCATTCTAAACCTTGAACCTGCA 59.174 43.478 0.00 0.00 0.00 4.41
626 724 4.079253 TCCATTCTAAACCTTGAACCTGC 58.921 43.478 0.00 0.00 0.00 4.85
627 725 4.459337 GGTCCATTCTAAACCTTGAACCTG 59.541 45.833 0.00 0.00 0.00 4.00
628 726 4.354087 AGGTCCATTCTAAACCTTGAACCT 59.646 41.667 0.00 0.00 40.53 3.50
629 727 4.663334 AGGTCCATTCTAAACCTTGAACC 58.337 43.478 0.00 0.00 40.53 3.62
647 745 8.102800 TCGAAGGTTTTATTTAGGAAAAGGTC 57.897 34.615 0.00 0.00 0.00 3.85
648 746 8.467963 TTCGAAGGTTTTATTTAGGAAAAGGT 57.532 30.769 0.00 0.00 0.00 3.50
649 747 9.406828 CTTTCGAAGGTTTTATTTAGGAAAAGG 57.593 33.333 0.00 0.00 0.00 3.11
650 748 9.961265 ACTTTCGAAGGTTTTATTTAGGAAAAG 57.039 29.630 7.16 0.00 0.00 2.27
666 764 2.226674 GGCAAAGAGGAACTTTCGAAGG 59.773 50.000 5.63 5.63 45.66 3.46
670 768 2.669391 GCATGGCAAAGAGGAACTTTCG 60.669 50.000 0.00 0.00 45.66 3.46
678 776 6.212888 AGTTTTATTAGCATGGCAAAGAGG 57.787 37.500 0.00 0.00 0.00 3.69
733 1367 1.600957 GATGAGACCATCAATGTGGCG 59.399 52.381 0.00 0.00 46.48 5.69
744 1378 0.244721 CGTCTGCAGTGATGAGACCA 59.755 55.000 14.67 0.00 33.87 4.02
745 1379 0.244994 ACGTCTGCAGTGATGAGACC 59.755 55.000 14.67 0.00 33.87 3.85
747 1381 0.169009 CGACGTCTGCAGTGATGAGA 59.831 55.000 14.67 0.00 0.00 3.27
820 1461 3.577313 GAAAGAGGATGCCGCCGC 61.577 66.667 0.00 0.00 0.00 6.53
821 1462 2.897350 GGAAAGAGGATGCCGCCG 60.897 66.667 0.00 0.00 0.00 6.46
822 1463 2.897350 CGGAAAGAGGATGCCGCC 60.897 66.667 0.00 0.00 37.08 6.13
950 1606 0.043334 TGGGAGAGGAGGAAAGGAGG 59.957 60.000 0.00 0.00 0.00 4.30
1190 2086 2.807967 CGAGCATACATACAACATGGGG 59.192 50.000 0.00 0.00 0.00 4.96
1398 2309 8.143193 TGAAGTTTTATGGACTTACGACAAGTA 58.857 33.333 7.07 0.00 37.46 2.24
1522 2439 5.998454 ATTCGCAGATGACTTATTTGGAG 57.002 39.130 0.00 0.00 35.04 3.86
1534 2451 8.624701 ATTCAAAATGTCTAAATTCGCAGATG 57.375 30.769 0.00 0.00 35.04 2.90
1626 2543 2.109126 GCACTAAGCTCCGCCCTTG 61.109 63.158 0.00 0.00 41.15 3.61
1627 2544 1.915078 ATGCACTAAGCTCCGCCCTT 61.915 55.000 0.00 0.00 45.94 3.95
1628 2545 2.370445 ATGCACTAAGCTCCGCCCT 61.370 57.895 0.00 0.00 45.94 5.19
1629 2546 2.182842 CATGCACTAAGCTCCGCCC 61.183 63.158 0.00 0.00 45.94 6.13
1630 2547 2.182842 CCATGCACTAAGCTCCGCC 61.183 63.158 0.00 0.00 45.94 6.13
1631 2548 2.828128 GCCATGCACTAAGCTCCGC 61.828 63.158 0.00 0.00 45.94 5.54
1632 2549 1.153289 AGCCATGCACTAAGCTCCG 60.153 57.895 0.00 0.00 45.94 4.63
1633 2550 1.099879 CCAGCCATGCACTAAGCTCC 61.100 60.000 0.00 0.00 45.94 4.70
1634 2551 1.099879 CCCAGCCATGCACTAAGCTC 61.100 60.000 0.00 0.00 45.94 4.09
1635 2552 1.077212 CCCAGCCATGCACTAAGCT 60.077 57.895 0.00 0.00 45.94 3.74
1636 2553 2.123428 CCCCAGCCATGCACTAAGC 61.123 63.158 0.00 0.00 45.96 3.09
1637 2554 1.454479 CCCCCAGCCATGCACTAAG 60.454 63.158 0.00 0.00 0.00 2.18
1666 2583 2.995480 ATGTGCAAATCCTTGGGGG 58.005 52.632 0.00 0.00 32.76 5.40
2074 2991 7.990886 AGACATAGATTTAGCAATCCCGTTTTA 59.009 33.333 0.00 0.00 39.95 1.52
2235 3152 3.628032 TGTGGCTAGATCTTAGTCGACTG 59.372 47.826 28.12 12.46 0.00 3.51
2279 3196 1.975660 TGTTCCAGCCTTACAACCAC 58.024 50.000 0.00 0.00 0.00 4.16
2388 3306 3.877559 TGACAGGATTTCCAGCATACAG 58.122 45.455 0.00 0.00 38.89 2.74
2422 3340 3.779759 TCATAAATGGATGCCGTTTTGC 58.220 40.909 8.77 0.00 39.42 3.68
2423 3341 6.041511 TCATTCATAAATGGATGCCGTTTTG 58.958 36.000 8.77 7.60 42.35 2.44
2424 3342 6.219417 TCATTCATAAATGGATGCCGTTTT 57.781 33.333 8.77 0.26 42.35 2.43
2425 3343 5.850557 TCATTCATAAATGGATGCCGTTT 57.149 34.783 6.38 8.54 42.35 3.60
2426 3344 5.221303 CCTTCATTCATAAATGGATGCCGTT 60.221 40.000 6.38 0.00 42.35 4.44
2427 3345 4.279169 CCTTCATTCATAAATGGATGCCGT 59.721 41.667 6.38 0.00 42.35 5.68
2428 3346 4.520111 TCCTTCATTCATAAATGGATGCCG 59.480 41.667 6.38 0.97 42.35 5.69
2429 3347 6.041296 AGTTCCTTCATTCATAAATGGATGCC 59.959 38.462 6.38 0.00 42.35 4.40
2430 3348 7.047460 AGTTCCTTCATTCATAAATGGATGC 57.953 36.000 6.38 0.00 42.35 3.91
2897 3816 9.768662 ATAAAAGCACATGAAAATGAGAAAACT 57.231 25.926 0.00 0.00 0.00 2.66
2930 3849 3.719144 CAAACGGGGCGGTCGAAC 61.719 66.667 0.00 0.00 0.00 3.95
2931 3850 4.992511 CCAAACGGGGCGGTCGAA 62.993 66.667 0.00 0.00 0.00 3.71
2989 3912 5.234757 TCACATGAATTTGCAAAAGTTCAGC 59.765 36.000 24.64 9.21 34.45 4.26
3077 4000 0.941207 CCCCCTTCCCACCCAAATAT 59.059 55.000 0.00 0.00 0.00 1.28
3149 4395 5.888161 CACTCTCCAGGCCAAAAGTAAATAT 59.112 40.000 5.01 0.00 0.00 1.28
3236 4482 9.585099 GTGTTTGATTAGCATGATTTGGAAATA 57.415 29.630 0.00 0.00 0.00 1.40
3297 4543 2.937799 GTGGTTTTAGTTCCACGACACA 59.062 45.455 0.00 0.00 43.34 3.72
3323 4569 8.673711 CAAATACTCCGTCTGATCCAAAATAAA 58.326 33.333 0.00 0.00 0.00 1.40
3336 4582 4.002906 TGCTTTGTCAAATACTCCGTCT 57.997 40.909 0.00 0.00 0.00 4.18
3402 4648 9.772973 AATAGTAATTGATTTGTGCGTCCTATA 57.227 29.630 0.00 0.00 0.00 1.31
3441 4687 3.136763 CCAATCTACTGTAGCTGCCATG 58.863 50.000 9.98 3.09 0.00 3.66
3453 4699 2.551270 TGCTCCTGTTCCCAATCTACT 58.449 47.619 0.00 0.00 0.00 2.57
3463 4709 1.734465 CCGTTCAGAATGCTCCTGTTC 59.266 52.381 0.00 0.00 34.76 3.18
3573 4819 4.372656 GGTCAGCATGTATCTAGGACAAC 58.627 47.826 0.00 0.10 37.40 3.32
3663 4912 0.776810 TTTGCTGGGAGGTCATGGAA 59.223 50.000 0.00 0.00 0.00 3.53
3679 4928 6.753744 GGATTTTTCTAGCAGGCATAACTTTG 59.246 38.462 0.00 0.00 0.00 2.77
3704 4953 9.020813 GGTACAGCATATATATATTGTGTCGTG 57.979 37.037 15.76 2.21 0.00 4.35
3729 4978 2.284150 CGGCGTTACAGTCATACAATGG 59.716 50.000 0.00 0.00 0.00 3.16
3740 4989 1.710013 ATTGTCAGACGGCGTTACAG 58.290 50.000 16.19 4.74 0.00 2.74
3862 5327 7.765819 GGGCAGAATTTATATTTGAAACAAGCT 59.234 33.333 0.00 0.00 0.00 3.74
4496 6041 8.276252 TGTAGCTTAATAATTGTTTCTGGGTC 57.724 34.615 0.00 0.00 0.00 4.46
4596 8201 3.621794 GACATATTTGTGCGATGCTTCC 58.378 45.455 0.00 0.00 35.79 3.46
4924 8543 5.416271 TGTGTCCCTAAATTGTCTCTACC 57.584 43.478 0.00 0.00 0.00 3.18
4952 8571 6.827762 TGCTTAACATGTTGTCCATCATCATA 59.172 34.615 21.42 0.00 35.48 2.15
5182 9057 6.367969 CGCCTAAACTCTGTAATTGTAGTGTT 59.632 38.462 0.00 0.00 33.52 3.32
5266 9141 1.972075 TCAACCACGGTGATCTGGTAA 59.028 47.619 10.28 0.00 40.06 2.85
5381 9256 2.594541 CGGTTCGCCTAGATTCTGC 58.405 57.895 0.00 0.00 34.30 4.26
5473 9352 6.237942 CCGCATCAGAATAAGACAGTTTACAG 60.238 42.308 0.00 0.00 0.00 2.74
5609 9566 0.253894 TCCCACACCAGCATCATCAG 59.746 55.000 0.00 0.00 0.00 2.90
5647 9604 2.401351 GTCGTCACCAAAGTAGTGTCC 58.599 52.381 0.00 0.00 36.58 4.02
5650 9607 1.001048 TCGGTCGTCACCAAAGTAGTG 60.001 52.381 0.00 0.00 44.02 2.74
5689 9646 4.377021 CCTGTTTTTCTGGGTTTTTAGCC 58.623 43.478 0.00 0.00 0.00 3.93
5725 9699 2.000447 GACTAGATCAAACCACCGCAC 59.000 52.381 0.00 0.00 0.00 5.34
5747 9724 5.976458 ACAATTTGTTTCCAGCAAAAGAGA 58.024 33.333 0.00 0.00 38.98 3.10
5748 9725 6.667007 AACAATTTGTTTCCAGCAAAAGAG 57.333 33.333 8.97 0.00 37.26 2.85
5752 9729 7.099764 TCTGTTAACAATTTGTTTCCAGCAAA 58.900 30.769 19.15 4.02 41.45 3.68
6003 10009 9.988350 GTCCAACTGACAAATAATATGTTAGTG 57.012 33.333 5.08 1.35 44.06 2.74
6019 10025 8.094798 TCAATTATTAGTGTTGTCCAACTGAC 57.905 34.615 11.14 2.73 44.72 3.51
6021 10027 7.970061 CCATCAATTATTAGTGTTGTCCAACTG 59.030 37.037 11.14 0.00 41.67 3.16
6022 10028 7.362920 GCCATCAATTATTAGTGTTGTCCAACT 60.363 37.037 11.14 0.00 41.67 3.16
6023 10029 6.751888 GCCATCAATTATTAGTGTTGTCCAAC 59.248 38.462 3.21 3.21 41.50 3.77
6026 10032 6.127758 TGTGCCATCAATTATTAGTGTTGTCC 60.128 38.462 0.00 0.00 0.00 4.02
6027 10033 6.851609 TGTGCCATCAATTATTAGTGTTGTC 58.148 36.000 0.00 0.00 0.00 3.18
6092 10172 6.647334 TGATGACCAGCTAAAACAATTGAA 57.353 33.333 13.59 0.00 0.00 2.69
6184 10264 1.522569 CCTCGAACCTCCCATCCAC 59.477 63.158 0.00 0.00 0.00 4.02
6430 10519 8.702163 TTTTCCTCTTTAAAGAACAGCAAAAG 57.298 30.769 18.25 4.21 34.03 2.27
6452 10541 5.739959 ACCAACAGCAAAACTACCAATTTT 58.260 33.333 0.00 0.00 0.00 1.82
6453 10542 5.351948 ACCAACAGCAAAACTACCAATTT 57.648 34.783 0.00 0.00 0.00 1.82
6470 10559 9.109533 CGTAATTTTACACACTTCATTACCAAC 57.890 33.333 1.76 0.00 33.28 3.77
6471 10560 9.053840 TCGTAATTTTACACACTTCATTACCAA 57.946 29.630 1.76 0.00 33.28 3.67
6472 10561 8.604640 TCGTAATTTTACACACTTCATTACCA 57.395 30.769 1.76 0.00 33.28 3.25
6476 10565 9.405587 CCAATTCGTAATTTTACACACTTCATT 57.594 29.630 1.76 0.00 33.28 2.57
6477 10566 7.540745 GCCAATTCGTAATTTTACACACTTCAT 59.459 33.333 1.76 0.00 33.28 2.57
6478 10567 6.858993 GCCAATTCGTAATTTTACACACTTCA 59.141 34.615 1.76 0.00 33.28 3.02
6479 10568 6.307077 GGCCAATTCGTAATTTTACACACTTC 59.693 38.462 0.00 0.00 33.28 3.01
6480 10569 6.153756 GGCCAATTCGTAATTTTACACACTT 58.846 36.000 0.00 0.00 33.28 3.16
6481 10570 5.618195 CGGCCAATTCGTAATTTTACACACT 60.618 40.000 2.24 0.00 33.28 3.55
6482 10571 4.555747 CGGCCAATTCGTAATTTTACACAC 59.444 41.667 2.24 0.00 33.28 3.82
6483 10572 4.215827 ACGGCCAATTCGTAATTTTACACA 59.784 37.500 2.24 0.00 39.22 3.72
6484 10573 4.555747 CACGGCCAATTCGTAATTTTACAC 59.444 41.667 2.24 0.00 38.94 2.90
6485 10574 4.724303 CACGGCCAATTCGTAATTTTACA 58.276 39.130 2.24 0.00 38.94 2.41
6486 10575 3.544682 GCACGGCCAATTCGTAATTTTAC 59.455 43.478 2.24 0.00 38.94 2.01
6487 10576 3.440872 AGCACGGCCAATTCGTAATTTTA 59.559 39.130 2.24 0.00 38.94 1.52
6488 10577 2.230266 AGCACGGCCAATTCGTAATTTT 59.770 40.909 2.24 0.00 38.94 1.82
6489 10578 1.816224 AGCACGGCCAATTCGTAATTT 59.184 42.857 2.24 0.00 38.94 1.82
6490 10579 1.400494 GAGCACGGCCAATTCGTAATT 59.600 47.619 2.24 0.00 38.94 1.40
6491 10580 1.014352 GAGCACGGCCAATTCGTAAT 58.986 50.000 2.24 0.00 38.94 1.89
6492 10581 0.036765 AGAGCACGGCCAATTCGTAA 60.037 50.000 2.24 0.00 38.94 3.18
6493 10582 0.036765 AAGAGCACGGCCAATTCGTA 60.037 50.000 2.24 0.00 38.94 3.43
6494 10583 1.298859 GAAGAGCACGGCCAATTCGT 61.299 55.000 2.24 0.00 41.93 3.85
6495 10584 1.298157 TGAAGAGCACGGCCAATTCG 61.298 55.000 2.24 0.00 0.00 3.34
6496 10585 0.449388 CTGAAGAGCACGGCCAATTC 59.551 55.000 2.24 0.00 0.00 2.17
6497 10586 0.036732 TCTGAAGAGCACGGCCAATT 59.963 50.000 2.24 0.00 0.00 2.32
6498 10587 0.036732 TTCTGAAGAGCACGGCCAAT 59.963 50.000 2.24 0.00 0.00 3.16
6499 10588 0.884704 GTTCTGAAGAGCACGGCCAA 60.885 55.000 2.24 0.00 0.00 4.52
6500 10589 1.301716 GTTCTGAAGAGCACGGCCA 60.302 57.895 2.24 0.00 0.00 5.36
6501 10590 0.603975 AAGTTCTGAAGAGCACGGCC 60.604 55.000 0.00 0.00 0.00 6.13
6502 10591 0.793250 GAAGTTCTGAAGAGCACGGC 59.207 55.000 0.00 0.00 0.00 5.68
6503 10592 1.063806 CGAAGTTCTGAAGAGCACGG 58.936 55.000 0.56 0.00 0.00 4.94
6504 10593 1.772182 ACGAAGTTCTGAAGAGCACG 58.228 50.000 0.56 10.31 37.78 5.34
6521 10610 3.061797 GCTACGATCGATCTTGTTTGACG 60.062 47.826 24.34 9.54 0.00 4.35
6523 10612 4.104696 TGCTACGATCGATCTTGTTTGA 57.895 40.909 24.34 0.00 0.00 2.69
6548 10637 9.871238 GGAGAGCAAATCTTTATCCGTTATATA 57.129 33.333 0.00 0.00 38.84 0.86
6549 10638 8.598041 AGGAGAGCAAATCTTTATCCGTTATAT 58.402 33.333 0.00 0.00 38.84 0.86
6550 10639 7.872993 CAGGAGAGCAAATCTTTATCCGTTATA 59.127 37.037 0.00 0.00 38.84 0.98
6551 10640 6.708054 CAGGAGAGCAAATCTTTATCCGTTAT 59.292 38.462 0.00 0.00 38.84 1.89
6552 10641 6.049149 CAGGAGAGCAAATCTTTATCCGTTA 58.951 40.000 0.00 0.00 38.84 3.18
6554 10643 4.162320 TCAGGAGAGCAAATCTTTATCCGT 59.838 41.667 0.00 0.00 38.84 4.69
6555 10644 4.697514 TCAGGAGAGCAAATCTTTATCCG 58.302 43.478 0.00 0.00 38.84 4.18
6556 10645 6.038050 CACTTCAGGAGAGCAAATCTTTATCC 59.962 42.308 0.00 0.00 38.84 2.59
6557 10646 6.597280 ACACTTCAGGAGAGCAAATCTTTATC 59.403 38.462 0.00 0.00 38.84 1.75
6571 10660 7.042658 GCCTTTATTCGTTATACACTTCAGGAG 60.043 40.741 0.00 0.00 0.00 3.69
6572 10661 6.759827 GCCTTTATTCGTTATACACTTCAGGA 59.240 38.462 0.00 0.00 0.00 3.86
6574 10663 7.772332 AGCCTTTATTCGTTATACACTTCAG 57.228 36.000 0.00 0.00 0.00 3.02
6580 10669 6.995511 AAGCAAGCCTTTATTCGTTATACA 57.004 33.333 0.00 0.00 0.00 2.29
6596 10685 7.090173 TGAACAAATTATTCAGGTAAGCAAGC 58.910 34.615 1.80 0.00 32.34 4.01
6597 10686 8.679288 CTGAACAAATTATTCAGGTAAGCAAG 57.321 34.615 18.44 0.00 46.21 4.01
6617 10706 0.668535 GGCCAACTGAACACCTGAAC 59.331 55.000 0.00 0.00 0.00 3.18
6647 10736 6.642950 TGGTTATGACACCAAAATAAAAAGCG 59.357 34.615 0.00 0.00 44.30 4.68
6661 10750 7.358352 CGCAGAAAATTCTTTTGGTTATGACAC 60.358 37.037 0.00 0.00 34.74 3.67
6681 10770 0.878416 GTAATGGTTGGCACGCAGAA 59.122 50.000 0.00 0.00 0.00 3.02
6693 10782 1.573829 CTTGCGCCGTGTGTAATGGT 61.574 55.000 4.18 0.00 37.27 3.55
6694 10783 1.134487 CTTGCGCCGTGTGTAATGG 59.866 57.895 4.18 0.00 38.09 3.16
6707 10796 5.119931 TGCCTATAATAATTTGGCTTGCG 57.880 39.130 0.00 0.00 43.57 4.85
6742 10831 1.511318 TTGTTGCGTGCTTATGGCGT 61.511 50.000 0.00 0.00 45.43 5.68
6754 10843 3.551082 TGTTGCTTCATTTCTTTGTTGCG 59.449 39.130 0.00 0.00 0.00 4.85
6764 10853 7.010367 CAGTTGTTAACATGTGTTGCTTCATTT 59.990 33.333 9.56 0.00 38.90 2.32
6782 10871 0.774276 TGCCCCATGTCCAGTTGTTA 59.226 50.000 0.00 0.00 0.00 2.41
6794 10883 3.384168 TGTATGACTAAGAGTGCCCCAT 58.616 45.455 0.00 0.00 0.00 4.00
6799 10889 3.491792 GGCCTCTGTATGACTAAGAGTGC 60.492 52.174 0.00 0.00 36.51 4.40
6801 10891 3.982516 TGGCCTCTGTATGACTAAGAGT 58.017 45.455 3.32 0.00 36.51 3.24
6805 10895 3.838317 ACACTTGGCCTCTGTATGACTAA 59.162 43.478 3.32 0.00 0.00 2.24
6813 10903 0.035056 GGCATACACTTGGCCTCTGT 60.035 55.000 3.32 4.98 44.32 3.41
6867 10957 7.071447 TCCATCAAAATAACGGAGGGAGTATAA 59.929 37.037 0.00 0.00 36.67 0.98
6869 10959 5.368523 TCCATCAAAATAACGGAGGGAGTAT 59.631 40.000 0.00 0.00 36.67 2.12
6871 10961 3.521937 TCCATCAAAATAACGGAGGGAGT 59.478 43.478 0.00 0.00 36.67 3.85
6872 10962 4.150897 TCCATCAAAATAACGGAGGGAG 57.849 45.455 0.00 0.00 36.67 4.30
6873 10963 4.266714 GTTCCATCAAAATAACGGAGGGA 58.733 43.478 0.00 0.00 39.50 4.20
6874 10964 3.064820 CGTTCCATCAAAATAACGGAGGG 59.935 47.826 0.00 0.00 40.63 4.30
6875 10965 4.273005 CGTTCCATCAAAATAACGGAGG 57.727 45.455 0.00 0.00 40.63 4.30
6879 10969 5.539582 TCTTCCGTTCCATCAAAATAACG 57.460 39.130 0.00 0.00 43.15 3.18
6880 10970 6.909909 ACTTCTTCCGTTCCATCAAAATAAC 58.090 36.000 0.00 0.00 0.00 1.89
6881 10971 8.624367 TTACTTCTTCCGTTCCATCAAAATAA 57.376 30.769 0.00 0.00 0.00 1.40
6882 10972 7.881232 ACTTACTTCTTCCGTTCCATCAAAATA 59.119 33.333 0.00 0.00 0.00 1.40
6883 10973 6.715264 ACTTACTTCTTCCGTTCCATCAAAAT 59.285 34.615 0.00 0.00 0.00 1.82
6884 10974 6.059484 ACTTACTTCTTCCGTTCCATCAAAA 58.941 36.000 0.00 0.00 0.00 2.44
6885 10975 5.617252 ACTTACTTCTTCCGTTCCATCAAA 58.383 37.500 0.00 0.00 0.00 2.69
6886 10976 5.223449 ACTTACTTCTTCCGTTCCATCAA 57.777 39.130 0.00 0.00 0.00 2.57
6887 10977 4.884668 ACTTACTTCTTCCGTTCCATCA 57.115 40.909 0.00 0.00 0.00 3.07
6888 10978 7.845066 ATTAACTTACTTCTTCCGTTCCATC 57.155 36.000 0.00 0.00 0.00 3.51
6889 10979 9.729281 TTTATTAACTTACTTCTTCCGTTCCAT 57.271 29.630 0.00 0.00 0.00 3.41
6890 10980 9.558396 TTTTATTAACTTACTTCTTCCGTTCCA 57.442 29.630 0.00 0.00 0.00 3.53
6998 11089 4.965814 AGAATCATGACGTTCTATGGCAT 58.034 39.130 9.38 4.88 33.15 4.40
6999 11090 4.406648 AGAATCATGACGTTCTATGGCA 57.593 40.909 9.38 0.00 33.15 4.92
7000 11091 4.572389 ACAAGAATCATGACGTTCTATGGC 59.428 41.667 11.13 0.00 33.76 4.40
7002 11093 7.042523 TGCATACAAGAATCATGACGTTCTATG 60.043 37.037 11.13 11.76 33.76 2.23
7003 11094 6.986231 TGCATACAAGAATCATGACGTTCTAT 59.014 34.615 11.13 6.52 33.76 1.98
7004 11095 6.337356 TGCATACAAGAATCATGACGTTCTA 58.663 36.000 11.13 0.00 33.76 2.10
7005 11096 5.178061 TGCATACAAGAATCATGACGTTCT 58.822 37.500 0.00 1.01 36.29 3.01
7006 11097 5.291858 TCTGCATACAAGAATCATGACGTTC 59.708 40.000 0.00 0.00 0.00 3.95
7007 11098 5.178061 TCTGCATACAAGAATCATGACGTT 58.822 37.500 0.00 0.00 0.00 3.99
7008 11099 4.758688 TCTGCATACAAGAATCATGACGT 58.241 39.130 0.00 0.00 0.00 4.34
7009 11100 5.063817 TGTTCTGCATACAAGAATCATGACG 59.936 40.000 0.00 0.00 0.00 4.35
7010 11101 6.426980 TGTTCTGCATACAAGAATCATGAC 57.573 37.500 0.00 0.00 0.00 3.06
7011 11102 7.634671 AATGTTCTGCATACAAGAATCATGA 57.365 32.000 0.00 0.00 36.67 3.07
7012 11103 8.697846 AAAATGTTCTGCATACAAGAATCATG 57.302 30.769 5.96 0.00 36.67 3.07
7013 11104 9.146984 CAAAAATGTTCTGCATACAAGAATCAT 57.853 29.630 5.96 1.91 36.67 2.45
7014 11105 8.143193 ACAAAAATGTTCTGCATACAAGAATCA 58.857 29.630 5.96 0.00 36.67 2.57
7015 11106 8.524870 ACAAAAATGTTCTGCATACAAGAATC 57.475 30.769 5.96 0.00 36.67 2.52
7016 11107 8.143193 TGACAAAAATGTTCTGCATACAAGAAT 58.857 29.630 5.96 0.00 36.67 2.40
7017 11108 7.487484 TGACAAAAATGTTCTGCATACAAGAA 58.513 30.769 5.96 0.00 36.67 2.52
7018 11109 7.036996 TGACAAAAATGTTCTGCATACAAGA 57.963 32.000 5.96 0.00 36.67 3.02
7019 11110 6.919662 ACTGACAAAAATGTTCTGCATACAAG 59.080 34.615 5.96 0.45 36.67 3.16
7020 11111 6.696583 CACTGACAAAAATGTTCTGCATACAA 59.303 34.615 5.96 0.00 36.67 2.41
7021 11112 6.183360 ACACTGACAAAAATGTTCTGCATACA 60.183 34.615 4.49 4.49 36.67 2.29
7022 11113 6.142798 CACACTGACAAAAATGTTCTGCATAC 59.857 38.462 0.00 0.00 36.67 2.39
7023 11114 6.039159 TCACACTGACAAAAATGTTCTGCATA 59.961 34.615 0.00 0.00 36.67 3.14
7024 11115 5.045215 CACACTGACAAAAATGTTCTGCAT 58.955 37.500 0.00 0.00 40.03 3.96
7025 11116 4.157472 TCACACTGACAAAAATGTTCTGCA 59.843 37.500 0.00 0.00 0.00 4.41
7026 11117 4.500477 GTCACACTGACAAAAATGTTCTGC 59.500 41.667 0.00 0.00 46.22 4.26
7039 11130 2.030562 CCCACGGGTCACACTGAC 59.969 66.667 0.00 0.00 46.23 3.51
7049 11140 2.543777 ATATCGATTTCACCCACGGG 57.456 50.000 1.71 0.00 42.03 5.28
7050 11141 4.514781 TCTATATCGATTTCACCCACGG 57.485 45.455 1.71 0.00 0.00 4.94
7051 11142 8.595533 CAATATTCTATATCGATTTCACCCACG 58.404 37.037 1.71 0.00 0.00 4.94
7052 11143 9.653287 TCAATATTCTATATCGATTTCACCCAC 57.347 33.333 1.71 0.00 0.00 4.61
7061 11152 9.896645 AGGCAATGTTCAATATTCTATATCGAT 57.103 29.630 2.16 2.16 0.00 3.59
7079 11170 3.367703 GCTGCTGTCAAATTAGGCAATGT 60.368 43.478 0.00 0.00 32.43 2.71
7121 11212 9.730705 ATGAAAGATCTGAAATGTTAGAACTCA 57.269 29.630 0.00 0.00 0.00 3.41
7197 11289 0.037590 AAGTTTGGGATACGCCTGCA 59.962 50.000 0.00 0.00 36.66 4.41
7217 11309 4.537751 ACTAGACTAGAGTGCTATTGCCA 58.462 43.478 16.55 0.00 38.71 4.92
7227 11319 6.129414 TCTGGTTTCAGACTAGACTAGAGT 57.871 41.667 16.55 0.00 44.39 3.24
7242 11334 1.067060 GTTTGGTGTGCCTCTGGTTTC 59.933 52.381 0.00 0.00 35.27 2.78
7243 11335 1.111277 GTTTGGTGTGCCTCTGGTTT 58.889 50.000 0.00 0.00 35.27 3.27
7244 11336 1.101049 CGTTTGGTGTGCCTCTGGTT 61.101 55.000 0.00 0.00 35.27 3.67
7245 11337 1.525995 CGTTTGGTGTGCCTCTGGT 60.526 57.895 0.00 0.00 35.27 4.00
7246 11338 1.101049 AACGTTTGGTGTGCCTCTGG 61.101 55.000 0.00 0.00 35.27 3.86
7247 11339 0.307760 GAACGTTTGGTGTGCCTCTG 59.692 55.000 0.46 0.00 35.27 3.35
7248 11340 0.180406 AGAACGTTTGGTGTGCCTCT 59.820 50.000 0.46 0.00 35.27 3.69
7249 11341 1.002792 GAAGAACGTTTGGTGTGCCTC 60.003 52.381 0.46 0.00 35.27 4.70
7250 11342 1.021968 GAAGAACGTTTGGTGTGCCT 58.978 50.000 0.46 0.00 35.27 4.75
7251 11343 0.316689 CGAAGAACGTTTGGTGTGCC 60.317 55.000 0.46 0.00 37.22 5.01
7252 11344 3.142796 CGAAGAACGTTTGGTGTGC 57.857 52.632 0.46 0.00 37.22 4.57
7262 11354 1.577328 ATGCCCTGCAACGAAGAACG 61.577 55.000 0.00 0.00 43.62 3.95
7263 11355 0.598065 AATGCCCTGCAACGAAGAAC 59.402 50.000 0.00 0.00 43.62 3.01
7264 11356 0.597568 CAATGCCCTGCAACGAAGAA 59.402 50.000 0.00 0.00 43.62 2.52
7265 11357 1.243342 CCAATGCCCTGCAACGAAGA 61.243 55.000 0.00 0.00 43.62 2.87
7266 11358 1.213537 CCAATGCCCTGCAACGAAG 59.786 57.895 0.00 0.00 43.62 3.79
7333 11425 4.820284 GGCAAGAACTTATAGCCATCAC 57.180 45.455 8.76 0.00 44.59 3.06
7338 11430 4.199310 TGACATGGCAAGAACTTATAGCC 58.801 43.478 0.00 7.24 45.41 3.93
7339 11431 5.762218 AGATGACATGGCAAGAACTTATAGC 59.238 40.000 4.70 0.00 0.00 2.97
7342 11434 7.605691 GCTATAGATGACATGGCAAGAACTTAT 59.394 37.037 4.70 0.50 30.84 1.73
7343 11435 6.931281 GCTATAGATGACATGGCAAGAACTTA 59.069 38.462 4.70 0.00 30.84 2.24
7344 11436 5.762218 GCTATAGATGACATGGCAAGAACTT 59.238 40.000 4.70 0.00 30.84 2.66
7345 11437 5.163269 TGCTATAGATGACATGGCAAGAACT 60.163 40.000 4.70 5.75 37.00 3.01
7346 11438 5.059161 TGCTATAGATGACATGGCAAGAAC 58.941 41.667 4.70 0.00 37.00 3.01
7347 11439 5.294734 TGCTATAGATGACATGGCAAGAA 57.705 39.130 4.70 0.00 37.00 2.52
7348 11440 4.961438 TGCTATAGATGACATGGCAAGA 57.039 40.909 4.70 0.00 37.00 3.02
7350 11442 5.039920 ACTTGCTATAGATGACATGGCAA 57.960 39.130 4.70 2.50 44.47 4.52
7351 11443 4.694760 ACTTGCTATAGATGACATGGCA 57.305 40.909 2.18 2.18 38.01 4.92
7352 11444 6.382869 AAAACTTGCTATAGATGACATGGC 57.617 37.500 3.21 0.00 0.00 4.40
7383 11475 8.970859 AAAATAGCACATCTTCATAGCTAACT 57.029 30.769 0.00 0.00 40.70 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.