Multiple sequence alignment - TraesCS7D01G360000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G360000 chr7D 100.000 2759 0 0 1 2759 462308426 462305668 0.000000e+00 5096.0
1 TraesCS7D01G360000 chr6D 97.479 1785 40 4 605 2386 258214024 258212242 0.000000e+00 3042.0
2 TraesCS7D01G360000 chr6D 90.268 596 35 13 176 753 258214514 258213924 0.000000e+00 758.0
3 TraesCS7D01G360000 chr6D 86.321 212 18 9 1446 1654 39063193 39062990 1.290000e-53 220.0
4 TraesCS7D01G360000 chr2B 88.278 819 79 12 185 992 361651791 361652603 0.000000e+00 965.0
5 TraesCS7D01G360000 chr2B 90.415 313 27 2 2068 2380 361652626 361652935 2.560000e-110 409.0
6 TraesCS7D01G360000 chr7A 92.411 672 37 3 1725 2382 722832838 722832167 0.000000e+00 946.0
7 TraesCS7D01G360000 chr7A 90.785 586 39 3 185 756 722867845 722867261 0.000000e+00 769.0
8 TraesCS7D01G360000 chr7A 93.431 274 17 1 752 1024 722833305 722833032 3.310000e-109 405.0
9 TraesCS7D01G360000 chr5B 87.668 819 83 12 185 992 539299567 539300378 0.000000e+00 937.0
10 TraesCS7D01G360000 chr5B 89.828 698 47 14 1040 1728 322285663 322284981 0.000000e+00 874.0
11 TraesCS7D01G360000 chr5B 91.346 312 25 2 2068 2379 539300401 539300710 2.540000e-115 425.0
12 TraesCS7D01G360000 chr5B 96.970 33 1 0 2582 2614 378637635 378637667 3.840000e-04 56.5
13 TraesCS7D01G360000 chr1A 87.606 823 83 13 182 992 504384647 504383832 0.000000e+00 937.0
14 TraesCS7D01G360000 chr1A 85.782 211 21 7 1446 1654 564156935 564156732 5.980000e-52 215.0
15 TraesCS7D01G360000 chr3B 87.668 819 82 13 185 992 698125422 698126232 0.000000e+00 935.0
16 TraesCS7D01G360000 chr3B 89.700 699 48 15 1041 1728 7321360 7322045 0.000000e+00 870.0
17 TraesCS7D01G360000 chr3B 90.675 311 26 3 2068 2378 698126255 698126562 7.110000e-111 411.0
18 TraesCS7D01G360000 chr3B 93.548 124 8 0 901 1024 7319064 7319187 4.690000e-43 185.0
19 TraesCS7D01G360000 chr5D 89.971 698 48 13 1040 1728 431175157 431174473 0.000000e+00 881.0
20 TraesCS7D01G360000 chr5D 93.548 124 8 0 901 1024 431180831 431180708 4.690000e-43 185.0
21 TraesCS7D01G360000 chr5D 86.250 80 8 1 1776 1852 34221446 34221525 1.760000e-12 84.2
22 TraesCS7D01G360000 chr5D 97.059 34 1 0 2581 2614 11144689 11144722 1.070000e-04 58.4
23 TraesCS7D01G360000 chr4B 89.828 698 49 14 1040 1728 595722157 595721473 0.000000e+00 876.0
24 TraesCS7D01G360000 chr4B 89.880 583 43 4 185 752 672594322 672594903 0.000000e+00 736.0
25 TraesCS7D01G360000 chr4B 94.015 401 24 0 1979 2379 672595342 672595742 2.350000e-170 608.0
26 TraesCS7D01G360000 chr4B 94.675 169 9 0 758 926 672595179 672595347 2.110000e-66 263.0
27 TraesCS7D01G360000 chr4B 86.730 211 18 8 1446 1654 273960624 273960826 2.760000e-55 226.0
28 TraesCS7D01G360000 chr5A 89.843 699 45 16 1040 1728 115994890 115994208 0.000000e+00 874.0
29 TraesCS7D01G360000 chr3D 89.828 698 48 16 1040 1728 376075625 376074942 0.000000e+00 874.0
30 TraesCS7D01G360000 chr3D 93.548 124 7 1 901 1024 376077926 376077804 1.690000e-42 183.0
31 TraesCS7D01G360000 chr2A 89.670 697 53 13 1040 1728 613239437 613238752 0.000000e+00 870.0
32 TraesCS7D01G360000 chr2A 89.941 338 16 8 185 522 325657140 325656821 1.180000e-113 420.0
33 TraesCS7D01G360000 chr6A 89.685 698 48 14 1040 1728 367763836 367763154 0.000000e+00 869.0
34 TraesCS7D01G360000 chr6A 92.722 316 14 4 2070 2379 610756016 610755704 5.420000e-122 448.0
35 TraesCS7D01G360000 chr6A 86.792 212 17 9 1446 1654 603925959 603926162 2.760000e-55 226.0
36 TraesCS7D01G360000 chr7B 94.350 531 30 0 1848 2378 240326594 240326064 0.000000e+00 815.0
37 TraesCS7D01G360000 chr7B 89.613 568 39 6 192 757 240327737 240327188 0.000000e+00 704.0
38 TraesCS7D01G360000 chr7B 89.136 405 24 11 192 594 240328313 240327927 1.150000e-133 486.0
39 TraesCS7D01G360000 chr7B 91.185 329 26 3 616 943 240327280 240326954 7.010000e-121 444.0
40 TraesCS7D01G360000 chr6B 87.215 571 63 8 185 753 649008058 649007496 2.320000e-180 641.0
41 TraesCS7D01G360000 chr6B 93.248 311 19 2 2068 2378 649007178 649006870 9.010000e-125 457.0
42 TraesCS7D01G360000 chr6B 85.821 402 43 10 601 992 649007598 649007201 5.500000e-112 414.0
43 TraesCS7D01G360000 chr4A 86.321 212 18 9 1446 1654 147532894 147532691 1.290000e-53 220.0
44 TraesCS7D01G360000 chr3A 86.256 211 20 7 1446 1654 126054358 126054561 1.290000e-53 220.0
45 TraesCS7D01G360000 chr3A 86.321 212 18 9 1446 1654 144700760 144700963 1.290000e-53 220.0
46 TraesCS7D01G360000 chr2D 86.256 211 20 7 1446 1654 618321713 618321510 1.290000e-53 220.0
47 TraesCS7D01G360000 chr2D 85.455 55 5 2 2563 2614 363478681 363478627 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G360000 chr7D 462305668 462308426 2758 True 5096.000000 5096 100.000000 1 2759 1 chr7D.!!$R1 2758
1 TraesCS7D01G360000 chr6D 258212242 258214514 2272 True 1900.000000 3042 93.873500 176 2386 2 chr6D.!!$R2 2210
2 TraesCS7D01G360000 chr2B 361651791 361652935 1144 False 687.000000 965 89.346500 185 2380 2 chr2B.!!$F1 2195
3 TraesCS7D01G360000 chr7A 722867261 722867845 584 True 769.000000 769 90.785000 185 756 1 chr7A.!!$R1 571
4 TraesCS7D01G360000 chr7A 722832167 722833305 1138 True 675.500000 946 92.921000 752 2382 2 chr7A.!!$R2 1630
5 TraesCS7D01G360000 chr5B 322284981 322285663 682 True 874.000000 874 89.828000 1040 1728 1 chr5B.!!$R1 688
6 TraesCS7D01G360000 chr5B 539299567 539300710 1143 False 681.000000 937 89.507000 185 2379 2 chr5B.!!$F2 2194
7 TraesCS7D01G360000 chr1A 504383832 504384647 815 True 937.000000 937 87.606000 182 992 1 chr1A.!!$R1 810
8 TraesCS7D01G360000 chr3B 698125422 698126562 1140 False 673.000000 935 89.171500 185 2378 2 chr3B.!!$F2 2193
9 TraesCS7D01G360000 chr3B 7319064 7322045 2981 False 527.500000 870 91.624000 901 1728 2 chr3B.!!$F1 827
10 TraesCS7D01G360000 chr5D 431174473 431175157 684 True 881.000000 881 89.971000 1040 1728 1 chr5D.!!$R1 688
11 TraesCS7D01G360000 chr4B 595721473 595722157 684 True 876.000000 876 89.828000 1040 1728 1 chr4B.!!$R1 688
12 TraesCS7D01G360000 chr4B 672594322 672595742 1420 False 535.666667 736 92.856667 185 2379 3 chr4B.!!$F2 2194
13 TraesCS7D01G360000 chr5A 115994208 115994890 682 True 874.000000 874 89.843000 1040 1728 1 chr5A.!!$R1 688
14 TraesCS7D01G360000 chr3D 376074942 376077926 2984 True 528.500000 874 91.688000 901 1728 2 chr3D.!!$R1 827
15 TraesCS7D01G360000 chr2A 613238752 613239437 685 True 870.000000 870 89.670000 1040 1728 1 chr2A.!!$R2 688
16 TraesCS7D01G360000 chr6A 367763154 367763836 682 True 869.000000 869 89.685000 1040 1728 1 chr6A.!!$R1 688
17 TraesCS7D01G360000 chr7B 240326064 240328313 2249 True 612.250000 815 91.071000 192 2378 4 chr7B.!!$R1 2186
18 TraesCS7D01G360000 chr6B 649006870 649008058 1188 True 504.000000 641 88.761333 185 2378 3 chr6B.!!$R1 2193

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
32 33 0.173255 CGCCAAATAAGCCCCAGTTG 59.827 55.0 0.00 0.00 0.00 3.16 F
50 51 0.179020 TGACAGCAACTGGTTGAGGG 60.179 55.0 16.41 7.53 42.93 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1403 4650 1.544246 GCTAACCTTGGCGGAAAACAT 59.456 47.619 0.0 0.0 36.31 2.71 R
2399 5676 1.070914 GGGAAATCGGGCAAAAACCAA 59.929 47.619 0.0 0.0 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 1.840181 GCTTAAGGCGCCAAATAAGC 58.160 50.000 35.02 35.02 42.19 3.09
28 29 2.757917 GGCGCCAAATAAGCCCCA 60.758 61.111 24.80 0.00 44.80 4.96
29 30 2.785425 GGCGCCAAATAAGCCCCAG 61.785 63.158 24.80 0.00 44.80 4.45
30 31 2.052104 GCGCCAAATAAGCCCCAGT 61.052 57.895 0.00 0.00 0.00 4.00
31 32 1.604147 GCGCCAAATAAGCCCCAGTT 61.604 55.000 0.00 0.00 0.00 3.16
32 33 0.173255 CGCCAAATAAGCCCCAGTTG 59.827 55.000 0.00 0.00 0.00 3.16
33 34 1.555967 GCCAAATAAGCCCCAGTTGA 58.444 50.000 0.00 0.00 0.00 3.18
34 35 1.204704 GCCAAATAAGCCCCAGTTGAC 59.795 52.381 0.00 0.00 0.00 3.18
35 36 2.524306 CCAAATAAGCCCCAGTTGACA 58.476 47.619 0.00 0.00 0.00 3.58
36 37 2.493278 CCAAATAAGCCCCAGTTGACAG 59.507 50.000 0.00 0.00 0.00 3.51
37 38 1.839424 AATAAGCCCCAGTTGACAGC 58.161 50.000 0.00 0.00 0.00 4.40
38 39 0.698238 ATAAGCCCCAGTTGACAGCA 59.302 50.000 0.00 0.00 0.00 4.41
39 40 0.476338 TAAGCCCCAGTTGACAGCAA 59.524 50.000 0.00 0.00 0.00 3.91
49 50 1.679139 TTGACAGCAACTGGTTGAGG 58.321 50.000 16.41 9.65 42.93 3.86
50 51 0.179020 TGACAGCAACTGGTTGAGGG 60.179 55.000 16.41 7.53 42.93 4.30
51 52 0.890996 GACAGCAACTGGTTGAGGGG 60.891 60.000 16.41 5.43 42.93 4.79
52 53 1.151450 CAGCAACTGGTTGAGGGGT 59.849 57.895 16.41 0.00 42.93 4.95
53 54 0.400213 CAGCAACTGGTTGAGGGGTA 59.600 55.000 16.41 0.00 42.93 3.69
54 55 0.693049 AGCAACTGGTTGAGGGGTAG 59.307 55.000 16.41 0.00 42.93 3.18
55 56 0.960861 GCAACTGGTTGAGGGGTAGC 60.961 60.000 16.41 0.00 42.93 3.58
56 57 0.322546 CAACTGGTTGAGGGGTAGCC 60.323 60.000 1.07 1.07 42.93 3.93
57 58 1.498176 AACTGGTTGAGGGGTAGCCC 61.498 60.000 23.15 23.15 44.51 5.19
58 59 1.616628 CTGGTTGAGGGGTAGCCCT 60.617 63.158 32.80 32.80 44.66 5.19
59 60 1.151677 TGGTTGAGGGGTAGCCCTT 60.152 57.895 32.73 17.11 44.66 3.95
60 61 1.303282 GGTTGAGGGGTAGCCCTTG 59.697 63.158 32.73 0.00 44.66 3.61
61 62 1.378646 GTTGAGGGGTAGCCCTTGC 60.379 63.158 32.73 21.30 44.66 4.01
62 63 2.966732 TTGAGGGGTAGCCCTTGCG 61.967 63.158 32.73 0.00 44.66 4.85
63 64 3.400054 GAGGGGTAGCCCTTGCGT 61.400 66.667 32.73 11.48 44.66 5.24
64 65 3.682292 GAGGGGTAGCCCTTGCGTG 62.682 68.421 32.73 0.00 44.66 5.34
65 66 3.712907 GGGGTAGCCCTTGCGTGA 61.713 66.667 23.31 0.00 44.66 4.35
66 67 2.125106 GGGTAGCCCTTGCGTGAG 60.125 66.667 0.00 0.00 44.33 3.51
78 79 3.030652 CGTGAGCCCAAAAAGCGT 58.969 55.556 0.00 0.00 34.64 5.07
79 80 1.082104 CGTGAGCCCAAAAAGCGTC 60.082 57.895 0.00 0.00 34.64 5.19
80 81 1.781025 CGTGAGCCCAAAAAGCGTCA 61.781 55.000 0.00 0.00 34.64 4.35
81 82 0.317854 GTGAGCCCAAAAAGCGTCAC 60.318 55.000 0.00 0.00 34.04 3.67
82 83 1.285950 GAGCCCAAAAAGCGTCACC 59.714 57.895 0.00 0.00 34.64 4.02
83 84 1.152756 AGCCCAAAAAGCGTCACCT 60.153 52.632 0.00 0.00 34.64 4.00
84 85 1.007387 GCCCAAAAAGCGTCACCTG 60.007 57.895 0.00 0.00 0.00 4.00
85 86 1.659794 CCCAAAAAGCGTCACCTGG 59.340 57.895 0.00 0.00 0.00 4.45
86 87 1.659794 CCAAAAAGCGTCACCTGGG 59.340 57.895 0.00 0.00 0.00 4.45
87 88 1.106944 CCAAAAAGCGTCACCTGGGT 61.107 55.000 0.00 0.00 0.00 4.51
88 89 0.744281 CAAAAAGCGTCACCTGGGTT 59.256 50.000 0.00 0.00 0.00 4.11
89 90 0.744281 AAAAAGCGTCACCTGGGTTG 59.256 50.000 0.00 0.00 0.00 3.77
90 91 1.106944 AAAAGCGTCACCTGGGTTGG 61.107 55.000 0.00 0.00 0.00 3.77
91 92 2.976494 AAAGCGTCACCTGGGTTGGG 62.976 60.000 0.00 0.00 0.00 4.12
93 94 3.953775 CGTCACCTGGGTTGGGCT 61.954 66.667 0.00 0.00 0.00 5.19
94 95 2.282462 GTCACCTGGGTTGGGCTG 60.282 66.667 0.00 0.00 0.00 4.85
95 96 2.449518 TCACCTGGGTTGGGCTGA 60.450 61.111 0.00 0.00 0.00 4.26
96 97 2.034687 CACCTGGGTTGGGCTGAG 59.965 66.667 0.00 0.00 0.00 3.35
97 98 2.121963 ACCTGGGTTGGGCTGAGA 60.122 61.111 0.00 0.00 0.00 3.27
98 99 2.227036 ACCTGGGTTGGGCTGAGAG 61.227 63.158 0.00 0.00 0.00 3.20
99 100 2.045536 CTGGGTTGGGCTGAGAGC 60.046 66.667 0.00 0.00 41.46 4.09
100 101 2.853542 TGGGTTGGGCTGAGAGCA 60.854 61.111 0.00 0.00 44.75 4.26
101 102 2.207501 CTGGGTTGGGCTGAGAGCAT 62.208 60.000 0.00 0.00 44.75 3.79
102 103 0.913934 TGGGTTGGGCTGAGAGCATA 60.914 55.000 0.00 0.00 44.75 3.14
103 104 0.464554 GGGTTGGGCTGAGAGCATAC 60.465 60.000 0.00 0.00 44.75 2.39
104 105 0.464554 GGTTGGGCTGAGAGCATACC 60.465 60.000 0.00 0.00 44.75 2.73
105 106 0.253044 GTTGGGCTGAGAGCATACCA 59.747 55.000 0.00 0.00 44.75 3.25
106 107 0.253044 TTGGGCTGAGAGCATACCAC 59.747 55.000 0.00 0.00 44.75 4.16
107 108 0.618680 TGGGCTGAGAGCATACCACT 60.619 55.000 0.00 0.00 44.75 4.00
108 109 0.543749 GGGCTGAGAGCATACCACTT 59.456 55.000 0.00 0.00 44.75 3.16
109 110 1.661341 GGCTGAGAGCATACCACTTG 58.339 55.000 0.00 0.00 44.75 3.16
110 111 1.208052 GGCTGAGAGCATACCACTTGA 59.792 52.381 0.00 0.00 44.75 3.02
111 112 2.158842 GGCTGAGAGCATACCACTTGAT 60.159 50.000 0.00 0.00 44.75 2.57
112 113 2.871022 GCTGAGAGCATACCACTTGATG 59.129 50.000 0.00 0.00 41.89 3.07
116 117 2.397751 GCATACCACTTGATGCGCT 58.602 52.632 9.73 0.00 39.15 5.92
117 118 0.305922 GCATACCACTTGATGCGCTC 59.694 55.000 9.73 4.27 39.15 5.03
118 119 1.945387 CATACCACTTGATGCGCTCT 58.055 50.000 9.73 0.00 0.00 4.09
119 120 1.863454 CATACCACTTGATGCGCTCTC 59.137 52.381 9.73 6.26 0.00 3.20
120 121 0.894835 TACCACTTGATGCGCTCTCA 59.105 50.000 9.73 9.19 0.00 3.27
121 122 0.390866 ACCACTTGATGCGCTCTCAG 60.391 55.000 9.73 8.37 0.00 3.35
122 123 1.703438 CCACTTGATGCGCTCTCAGC 61.703 60.000 9.73 0.00 38.02 4.26
123 124 1.449246 ACTTGATGCGCTCTCAGCC 60.449 57.895 9.73 0.00 38.18 4.85
124 125 1.449070 CTTGATGCGCTCTCAGCCA 60.449 57.895 9.73 0.00 38.18 4.75
125 126 1.703438 CTTGATGCGCTCTCAGCCAC 61.703 60.000 9.73 0.00 38.18 5.01
126 127 2.894387 GATGCGCTCTCAGCCACC 60.894 66.667 9.73 0.00 38.18 4.61
127 128 4.827087 ATGCGCTCTCAGCCACCG 62.827 66.667 9.73 0.00 38.18 4.94
131 132 4.479993 GCTCTCAGCCACCGCCAT 62.480 66.667 0.00 0.00 34.48 4.40
132 133 2.513204 CTCTCAGCCACCGCCATG 60.513 66.667 0.00 0.00 34.57 3.66
133 134 3.320879 CTCTCAGCCACCGCCATGT 62.321 63.158 0.00 0.00 34.57 3.21
134 135 3.129502 CTCAGCCACCGCCATGTG 61.130 66.667 0.00 0.00 34.57 3.21
135 136 3.907260 CTCAGCCACCGCCATGTGT 62.907 63.158 0.00 0.00 34.35 3.72
136 137 3.434319 CAGCCACCGCCATGTGTC 61.434 66.667 0.00 0.00 34.35 3.67
137 138 3.952508 AGCCACCGCCATGTGTCA 61.953 61.111 0.00 0.00 34.35 3.58
138 139 3.737172 GCCACCGCCATGTGTCAC 61.737 66.667 0.00 0.00 34.35 3.67
139 140 2.281414 CCACCGCCATGTGTCACA 60.281 61.111 8.40 8.40 34.35 3.58
140 141 2.616330 CCACCGCCATGTGTCACAC 61.616 63.158 8.08 0.00 34.35 3.82
141 142 1.597854 CACCGCCATGTGTCACACT 60.598 57.895 8.08 0.00 35.11 3.55
142 143 1.597854 ACCGCCATGTGTCACACTG 60.598 57.895 8.08 7.95 35.11 3.66
143 144 2.327343 CCGCCATGTGTCACACTGG 61.327 63.158 21.08 21.08 36.48 4.00
144 145 2.327343 CGCCATGTGTCACACTGGG 61.327 63.158 24.06 17.27 35.11 4.45
145 146 2.629656 GCCATGTGTCACACTGGGC 61.630 63.158 22.27 22.27 42.88 5.36
146 147 2.327343 CCATGTGTCACACTGGGCG 61.327 63.158 19.08 0.00 35.11 6.13
147 148 2.669569 ATGTGTCACACTGGGCGC 60.670 61.111 8.08 0.00 35.11 6.53
148 149 3.182590 ATGTGTCACACTGGGCGCT 62.183 57.895 8.08 0.00 35.11 5.92
149 150 3.044305 GTGTCACACTGGGCGCTC 61.044 66.667 7.64 2.47 0.00 5.03
150 151 4.314440 TGTCACACTGGGCGCTCC 62.314 66.667 3.94 6.36 0.00 4.70
161 162 3.421567 GGCGCTCCCTTGGATTATT 57.578 52.632 7.64 0.00 0.00 1.40
162 163 1.692411 GGCGCTCCCTTGGATTATTT 58.308 50.000 7.64 0.00 0.00 1.40
163 164 2.031870 GGCGCTCCCTTGGATTATTTT 58.968 47.619 7.64 0.00 0.00 1.82
164 165 2.034685 GGCGCTCCCTTGGATTATTTTC 59.965 50.000 7.64 0.00 0.00 2.29
165 166 2.034685 GCGCTCCCTTGGATTATTTTCC 59.965 50.000 0.00 0.00 36.24 3.13
166 167 2.290641 CGCTCCCTTGGATTATTTTCCG 59.709 50.000 0.00 0.00 38.74 4.30
167 168 3.288092 GCTCCCTTGGATTATTTTCCGT 58.712 45.455 0.00 0.00 38.74 4.69
168 169 4.457466 GCTCCCTTGGATTATTTTCCGTA 58.543 43.478 0.00 0.00 38.74 4.02
169 170 4.275196 GCTCCCTTGGATTATTTTCCGTAC 59.725 45.833 0.00 0.00 38.74 3.67
170 171 5.433526 CTCCCTTGGATTATTTTCCGTACA 58.566 41.667 0.00 0.00 38.74 2.90
171 172 6.008696 TCCCTTGGATTATTTTCCGTACAT 57.991 37.500 0.00 0.00 38.74 2.29
172 173 5.825679 TCCCTTGGATTATTTTCCGTACATG 59.174 40.000 0.00 0.00 38.74 3.21
173 174 5.592688 CCCTTGGATTATTTTCCGTACATGT 59.407 40.000 2.69 2.69 38.74 3.21
174 175 6.096282 CCCTTGGATTATTTTCCGTACATGTT 59.904 38.462 2.30 0.00 38.74 2.71
175 176 7.363443 CCCTTGGATTATTTTCCGTACATGTTT 60.363 37.037 2.30 0.00 38.74 2.83
176 177 8.032451 CCTTGGATTATTTTCCGTACATGTTTT 58.968 33.333 2.30 0.00 38.74 2.43
177 178 8.973835 TTGGATTATTTTCCGTACATGTTTTC 57.026 30.769 2.30 0.00 38.74 2.29
178 179 8.343168 TGGATTATTTTCCGTACATGTTTTCT 57.657 30.769 2.30 0.00 38.74 2.52
179 180 8.240682 TGGATTATTTTCCGTACATGTTTTCTG 58.759 33.333 2.30 0.00 38.74 3.02
180 181 7.700656 GGATTATTTTCCGTACATGTTTTCTGG 59.299 37.037 2.30 0.00 0.00 3.86
181 182 7.513371 TTATTTTCCGTACATGTTTTCTGGT 57.487 32.000 2.30 0.00 0.00 4.00
182 183 5.838531 TTTTCCGTACATGTTTTCTGGTT 57.161 34.783 2.30 0.00 0.00 3.67
183 184 5.838531 TTTCCGTACATGTTTTCTGGTTT 57.161 34.783 2.30 0.00 0.00 3.27
294 296 6.779539 ACTTCATTTTCTTCCTTCCTTGACAT 59.220 34.615 0.00 0.00 0.00 3.06
441 457 1.139853 CTTCTCCCGATTCCCCTTCTG 59.860 57.143 0.00 0.00 0.00 3.02
442 458 1.147153 CTCCCGATTCCCCTTCTGC 59.853 63.158 0.00 0.00 0.00 4.26
443 459 1.306997 TCCCGATTCCCCTTCTGCT 60.307 57.895 0.00 0.00 0.00 4.24
444 460 1.147153 CCCGATTCCCCTTCTGCTC 59.853 63.158 0.00 0.00 0.00 4.26
445 461 1.227380 CCGATTCCCCTTCTGCTCG 60.227 63.158 0.00 0.00 0.00 5.03
446 462 1.676678 CCGATTCCCCTTCTGCTCGA 61.677 60.000 0.00 0.00 0.00 4.04
447 463 0.390860 CGATTCCCCTTCTGCTCGAT 59.609 55.000 0.00 0.00 0.00 3.59
448 464 1.604185 CGATTCCCCTTCTGCTCGATC 60.604 57.143 0.00 0.00 0.00 3.69
449 465 0.761802 ATTCCCCTTCTGCTCGATCC 59.238 55.000 0.00 0.00 0.00 3.36
450 466 1.338136 TTCCCCTTCTGCTCGATCCC 61.338 60.000 0.00 0.00 0.00 3.85
451 467 1.764054 CCCCTTCTGCTCGATCCCT 60.764 63.158 0.00 0.00 0.00 4.20
452 468 0.470080 CCCCTTCTGCTCGATCCCTA 60.470 60.000 0.00 0.00 0.00 3.53
453 469 1.414158 CCCTTCTGCTCGATCCCTAA 58.586 55.000 0.00 0.00 0.00 2.69
454 470 1.342819 CCCTTCTGCTCGATCCCTAAG 59.657 57.143 0.00 0.00 0.00 2.18
455 471 2.311463 CCTTCTGCTCGATCCCTAAGA 58.689 52.381 0.00 0.00 0.00 2.10
456 472 2.295909 CCTTCTGCTCGATCCCTAAGAG 59.704 54.545 0.00 0.00 35.28 2.85
457 473 3.218453 CTTCTGCTCGATCCCTAAGAGA 58.782 50.000 0.00 0.00 34.13 3.10
552 1218 2.365105 GGTGGAGGGATGGACGGA 60.365 66.667 0.00 0.00 0.00 4.69
642 1308 1.753848 CCATGGCGGGATGAAGCAA 60.754 57.895 0.00 0.00 34.54 3.91
874 1916 7.704472 CAGTGTACTTAGAGATGGATTGAAGAC 59.296 40.741 0.00 0.00 0.00 3.01
875 1917 7.617723 AGTGTACTTAGAGATGGATTGAAGACT 59.382 37.037 0.00 0.00 0.00 3.24
899 1941 6.669631 TCATCAGTGTACTTAGAGATGGGTA 58.330 40.000 0.00 0.00 34.98 3.69
937 1980 5.478332 GGATGGATCCAAACTCAACTTCTTT 59.522 40.000 20.67 0.00 46.38 2.52
999 2042 7.105241 AGGAAGGATATCAAATGCTTTTGTC 57.895 36.000 20.69 12.99 42.37 3.18
2056 5333 3.252554 ACAAGGGTGGCTTTATCCAAA 57.747 42.857 0.00 0.00 37.96 3.28
2382 5659 6.039159 GGCCAAATAAGGAATTCTCTCTTCTG 59.961 42.308 5.23 0.55 0.00 3.02
2386 5663 9.018582 CAAATAAGGAATTCTCTCTTCTGGTTT 57.981 33.333 5.23 0.00 0.00 3.27
2387 5664 9.593565 AAATAAGGAATTCTCTCTTCTGGTTTT 57.406 29.630 5.23 0.00 0.00 2.43
2388 5665 6.890979 AAGGAATTCTCTCTTCTGGTTTTG 57.109 37.500 5.23 0.00 0.00 2.44
2389 5666 5.320277 AGGAATTCTCTCTTCTGGTTTTGG 58.680 41.667 5.23 0.00 0.00 3.28
2390 5667 5.073691 AGGAATTCTCTCTTCTGGTTTTGGA 59.926 40.000 5.23 0.00 0.00 3.53
2391 5668 5.948758 GGAATTCTCTCTTCTGGTTTTGGAT 59.051 40.000 5.23 0.00 0.00 3.41
2392 5669 7.037297 AGGAATTCTCTCTTCTGGTTTTGGATA 60.037 37.037 5.23 0.00 0.00 2.59
2393 5670 7.281999 GGAATTCTCTCTTCTGGTTTTGGATAG 59.718 40.741 5.23 0.00 0.00 2.08
2394 5671 6.688073 TTCTCTCTTCTGGTTTTGGATAGT 57.312 37.500 0.00 0.00 0.00 2.12
2395 5672 6.688073 TCTCTCTTCTGGTTTTGGATAGTT 57.312 37.500 0.00 0.00 0.00 2.24
2396 5673 7.079451 TCTCTCTTCTGGTTTTGGATAGTTT 57.921 36.000 0.00 0.00 0.00 2.66
2397 5674 7.518188 TCTCTCTTCTGGTTTTGGATAGTTTT 58.482 34.615 0.00 0.00 0.00 2.43
2398 5675 7.998964 TCTCTCTTCTGGTTTTGGATAGTTTTT 59.001 33.333 0.00 0.00 0.00 1.94
2417 5694 4.884458 TTTTTGGTTTTTGCCCGATTTC 57.116 36.364 0.00 0.00 0.00 2.17
2418 5695 2.535012 TTGGTTTTTGCCCGATTTCC 57.465 45.000 0.00 0.00 0.00 3.13
2419 5696 0.682292 TGGTTTTTGCCCGATTTCCC 59.318 50.000 0.00 0.00 0.00 3.97
2420 5697 0.036765 GGTTTTTGCCCGATTTCCCC 60.037 55.000 0.00 0.00 0.00 4.81
2421 5698 0.682292 GTTTTTGCCCGATTTCCCCA 59.318 50.000 0.00 0.00 0.00 4.96
2422 5699 1.070914 GTTTTTGCCCGATTTCCCCAA 59.929 47.619 0.00 0.00 0.00 4.12
2423 5700 0.972883 TTTTGCCCGATTTCCCCAAG 59.027 50.000 0.00 0.00 0.00 3.61
2424 5701 0.902516 TTTGCCCGATTTCCCCAAGG 60.903 55.000 0.00 0.00 0.00 3.61
2425 5702 2.087857 TTGCCCGATTTCCCCAAGGT 62.088 55.000 0.00 0.00 0.00 3.50
2426 5703 2.052104 GCCCGATTTCCCCAAGGTG 61.052 63.158 0.00 0.00 0.00 4.00
2427 5704 1.382629 CCCGATTTCCCCAAGGTGT 59.617 57.895 0.00 0.00 0.00 4.16
2428 5705 0.251608 CCCGATTTCCCCAAGGTGTT 60.252 55.000 0.00 0.00 0.00 3.32
2429 5706 1.627864 CCGATTTCCCCAAGGTGTTT 58.372 50.000 0.00 0.00 0.00 2.83
2430 5707 1.967779 CCGATTTCCCCAAGGTGTTTT 59.032 47.619 0.00 0.00 0.00 2.43
2431 5708 3.158676 CCGATTTCCCCAAGGTGTTTTA 58.841 45.455 0.00 0.00 0.00 1.52
2432 5709 3.192633 CCGATTTCCCCAAGGTGTTTTAG 59.807 47.826 0.00 0.00 0.00 1.85
2433 5710 4.076394 CGATTTCCCCAAGGTGTTTTAGA 58.924 43.478 0.00 0.00 0.00 2.10
2434 5711 4.705023 CGATTTCCCCAAGGTGTTTTAGAT 59.295 41.667 0.00 0.00 0.00 1.98
2435 5712 5.883673 CGATTTCCCCAAGGTGTTTTAGATA 59.116 40.000 0.00 0.00 0.00 1.98
2436 5713 6.376018 CGATTTCCCCAAGGTGTTTTAGATAA 59.624 38.462 0.00 0.00 0.00 1.75
2437 5714 7.094118 CGATTTCCCCAAGGTGTTTTAGATAAA 60.094 37.037 0.00 0.00 0.00 1.40
2438 5715 7.916077 TTTCCCCAAGGTGTTTTAGATAAAA 57.084 32.000 0.00 0.00 33.17 1.52
2439 5716 7.916077 TTCCCCAAGGTGTTTTAGATAAAAA 57.084 32.000 0.00 0.00 36.97 1.94
2440 5717 7.533289 TCCCCAAGGTGTTTTAGATAAAAAG 57.467 36.000 0.00 0.00 37.74 2.27
2441 5718 7.299134 TCCCCAAGGTGTTTTAGATAAAAAGA 58.701 34.615 0.00 0.00 37.74 2.52
2442 5719 7.953493 TCCCCAAGGTGTTTTAGATAAAAAGAT 59.047 33.333 0.00 0.00 37.74 2.40
2443 5720 9.250246 CCCCAAGGTGTTTTAGATAAAAAGATA 57.750 33.333 0.00 0.00 37.74 1.98
2498 5775 3.536158 TCGTAAGAGCAACATGTTTGC 57.464 42.857 19.15 19.15 45.01 3.68
2506 5783 3.847037 GCAACATGTTTGCTTCTTGTG 57.153 42.857 8.77 0.00 41.87 3.33
2507 5784 2.540931 GCAACATGTTTGCTTCTTGTGG 59.459 45.455 8.77 0.00 41.87 4.17
2508 5785 3.784338 CAACATGTTTGCTTCTTGTGGT 58.216 40.909 8.77 0.00 0.00 4.16
2509 5786 3.441496 ACATGTTTGCTTCTTGTGGTG 57.559 42.857 0.00 0.00 0.00 4.17
2510 5787 2.101249 ACATGTTTGCTTCTTGTGGTGG 59.899 45.455 0.00 0.00 0.00 4.61
2511 5788 0.459489 TGTTTGCTTCTTGTGGTGGC 59.541 50.000 0.00 0.00 0.00 5.01
2512 5789 0.459489 GTTTGCTTCTTGTGGTGGCA 59.541 50.000 0.00 0.00 0.00 4.92
2513 5790 0.459489 TTTGCTTCTTGTGGTGGCAC 59.541 50.000 9.70 9.70 32.47 5.01
2514 5791 0.682532 TTGCTTCTTGTGGTGGCACA 60.683 50.000 20.82 2.61 32.47 4.57
2515 5792 0.467844 TGCTTCTTGTGGTGGCACAT 60.468 50.000 20.82 0.00 44.52 3.21
2516 5793 0.038892 GCTTCTTGTGGTGGCACATG 60.039 55.000 20.82 1.56 44.52 3.21
2517 5794 1.321474 CTTCTTGTGGTGGCACATGT 58.679 50.000 20.82 0.00 44.52 3.21
2518 5795 1.682854 CTTCTTGTGGTGGCACATGTT 59.317 47.619 20.82 0.00 44.52 2.71
2519 5796 1.774110 TCTTGTGGTGGCACATGTTT 58.226 45.000 20.82 0.00 44.52 2.83
2520 5797 1.408340 TCTTGTGGTGGCACATGTTTG 59.592 47.619 20.82 4.80 44.52 2.93
2521 5798 0.179089 TTGTGGTGGCACATGTTTGC 60.179 50.000 20.82 0.00 44.52 3.68
2522 5799 1.042003 TGTGGTGGCACATGTTTGCT 61.042 50.000 20.82 0.00 44.52 3.91
2523 5800 0.104671 GTGGTGGCACATGTTTGCTT 59.895 50.000 20.82 0.00 44.52 3.91
2524 5801 0.388659 TGGTGGCACATGTTTGCTTC 59.611 50.000 20.82 0.00 44.52 3.86
2525 5802 0.319813 GGTGGCACATGTTTGCTTCC 60.320 55.000 20.82 7.21 44.52 3.46
2526 5803 0.388659 GTGGCACATGTTTGCTTCCA 59.611 50.000 13.86 1.44 44.52 3.53
2527 5804 0.675083 TGGCACATGTTTGCTTCCAG 59.325 50.000 8.08 0.00 42.56 3.86
2528 5805 0.037975 GGCACATGTTTGCTTCCAGG 60.038 55.000 8.08 0.00 42.56 4.45
2529 5806 0.961019 GCACATGTTTGCTTCCAGGA 59.039 50.000 0.00 0.00 39.59 3.86
2530 5807 1.068055 GCACATGTTTGCTTCCAGGAG 60.068 52.381 0.00 0.00 39.59 3.69
2531 5808 2.507484 CACATGTTTGCTTCCAGGAGA 58.493 47.619 0.00 0.00 0.00 3.71
2532 5809 2.486982 CACATGTTTGCTTCCAGGAGAG 59.513 50.000 0.00 0.00 0.00 3.20
2533 5810 1.471684 CATGTTTGCTTCCAGGAGAGC 59.528 52.381 13.81 13.81 0.00 4.09
2534 5811 0.250901 TGTTTGCTTCCAGGAGAGCC 60.251 55.000 16.57 6.40 0.00 4.70
2535 5812 0.250901 GTTTGCTTCCAGGAGAGCCA 60.251 55.000 16.57 7.07 36.29 4.75
2536 5813 0.250901 TTTGCTTCCAGGAGAGCCAC 60.251 55.000 16.57 0.00 36.29 5.01
2537 5814 1.418097 TTGCTTCCAGGAGAGCCACA 61.418 55.000 16.57 3.53 36.29 4.17
2538 5815 1.376466 GCTTCCAGGAGAGCCACAA 59.624 57.895 10.89 0.00 36.29 3.33
2539 5816 0.034670 GCTTCCAGGAGAGCCACAAT 60.035 55.000 10.89 0.00 36.29 2.71
2540 5817 1.747709 CTTCCAGGAGAGCCACAATG 58.252 55.000 0.00 0.00 36.29 2.82
2541 5818 0.329261 TTCCAGGAGAGCCACAATGG 59.671 55.000 0.00 0.00 41.55 3.16
2542 5819 0.842030 TCCAGGAGAGCCACAATGGT 60.842 55.000 0.00 0.00 40.46 3.55
2543 5820 0.679002 CCAGGAGAGCCACAATGGTG 60.679 60.000 0.00 0.00 44.85 4.17
2554 5831 3.731652 CACAATGGTGGCTCTTGAAAA 57.268 42.857 0.00 0.00 41.45 2.29
2555 5832 3.645884 CACAATGGTGGCTCTTGAAAAG 58.354 45.455 0.00 0.00 42.78 2.27
2556 5833 3.318839 CACAATGGTGGCTCTTGAAAAGA 59.681 43.478 0.00 0.00 45.57 2.52
2557 5834 4.202141 CACAATGGTGGCTCTTGAAAAGAA 60.202 41.667 0.00 0.00 46.33 2.52
2558 5835 5.681954 CACAATGGTGGCTCTTGAAAAGAAA 60.682 40.000 0.00 0.00 46.33 2.52
2559 5836 6.961397 CACAATGGTGGCTCTTGAAAAGAAAT 60.961 38.462 0.00 0.00 46.33 2.17
2560 5837 8.894473 CACAATGGTGGCTCTTGAAAAGAAATG 61.894 40.741 0.00 0.00 46.33 2.32
2600 5877 2.961436 CGAGACGCACATATTTGCTTC 58.039 47.619 11.33 11.33 40.25 3.86
2605 5882 6.052840 AGACGCACATATTTGCTTCTTATG 57.947 37.500 15.07 0.17 46.00 1.90
2606 5883 5.008019 AGACGCACATATTTGCTTCTTATGG 59.992 40.000 15.07 0.00 46.00 2.74
2607 5884 4.881273 ACGCACATATTTGCTTCTTATGGA 59.119 37.500 11.84 0.00 40.62 3.41
2608 5885 5.008019 ACGCACATATTTGCTTCTTATGGAG 59.992 40.000 11.84 0.00 40.62 3.86
2609 5886 5.561532 CGCACATATTTGCTTCTTATGGAGG 60.562 44.000 11.84 0.00 40.62 4.30
2610 5887 5.766222 CACATATTTGCTTCTTATGGAGGC 58.234 41.667 0.00 0.00 45.68 4.70
2615 5892 1.673168 GCTTCTTATGGAGGCACAGG 58.327 55.000 0.00 0.00 44.96 4.00
2616 5893 1.210478 GCTTCTTATGGAGGCACAGGA 59.790 52.381 0.00 0.00 44.96 3.86
2617 5894 2.158696 GCTTCTTATGGAGGCACAGGAT 60.159 50.000 0.00 0.00 44.96 3.24
2618 5895 3.686691 GCTTCTTATGGAGGCACAGGATT 60.687 47.826 0.00 0.00 44.96 3.01
2619 5896 3.565764 TCTTATGGAGGCACAGGATTG 57.434 47.619 0.00 0.00 0.00 2.67
2620 5897 1.952296 CTTATGGAGGCACAGGATTGC 59.048 52.381 0.00 0.00 42.18 3.56
2621 5898 1.216064 TATGGAGGCACAGGATTGCT 58.784 50.000 0.00 0.00 42.56 3.91
2622 5899 0.333993 ATGGAGGCACAGGATTGCTT 59.666 50.000 0.00 0.00 42.56 3.91
2623 5900 0.322816 TGGAGGCACAGGATTGCTTC 60.323 55.000 0.00 0.00 45.47 3.86
2624 5901 1.372087 GGAGGCACAGGATTGCTTCG 61.372 60.000 1.70 0.00 46.76 3.79
2625 5902 1.986575 GAGGCACAGGATTGCTTCGC 61.987 60.000 0.00 0.00 42.56 4.70
2626 5903 2.099062 GCACAGGATTGCTTCGCG 59.901 61.111 0.00 0.00 39.59 5.87
2627 5904 2.390599 GCACAGGATTGCTTCGCGA 61.391 57.895 3.71 3.71 39.59 5.87
2628 5905 1.709147 GCACAGGATTGCTTCGCGAT 61.709 55.000 10.88 0.00 39.59 4.58
2629 5906 0.027194 CACAGGATTGCTTCGCGATG 59.973 55.000 10.88 14.54 32.11 3.84
2630 5907 1.010350 CAGGATTGCTTCGCGATGC 60.010 57.895 32.85 32.85 40.39 3.91
2631 5908 2.182842 AGGATTGCTTCGCGATGCC 61.183 57.895 34.98 23.23 40.87 4.40
2632 5909 2.182842 GGATTGCTTCGCGATGCCT 61.183 57.895 34.98 25.39 35.21 4.75
2633 5910 1.278038 GATTGCTTCGCGATGCCTC 59.722 57.895 34.98 27.99 32.11 4.70
2634 5911 1.153289 ATTGCTTCGCGATGCCTCT 60.153 52.632 34.98 20.99 30.57 3.69
2635 5912 1.156645 ATTGCTTCGCGATGCCTCTC 61.157 55.000 34.98 15.00 30.57 3.20
2636 5913 3.326210 GCTTCGCGATGCCTCTCG 61.326 66.667 30.48 5.49 41.54 4.04
2637 5914 2.409243 CTTCGCGATGCCTCTCGA 59.591 61.111 10.88 0.00 41.12 4.04
2638 5915 1.226688 CTTCGCGATGCCTCTCGAA 60.227 57.895 10.88 14.57 43.98 3.71
2639 5916 0.802222 CTTCGCGATGCCTCTCGAAA 60.802 55.000 10.88 3.25 45.05 3.46
2640 5917 0.389296 TTCGCGATGCCTCTCGAAAA 60.389 50.000 10.88 0.00 43.43 2.29
2641 5918 0.389296 TCGCGATGCCTCTCGAAAAA 60.389 50.000 3.71 0.00 41.12 1.94
2642 5919 0.025513 CGCGATGCCTCTCGAAAAAG 59.974 55.000 0.00 0.00 41.12 2.27
2643 5920 0.375106 GCGATGCCTCTCGAAAAAGG 59.625 55.000 4.81 4.23 41.12 3.11
2644 5921 2.007049 GCGATGCCTCTCGAAAAAGGA 61.007 52.381 11.34 0.00 41.12 3.36
2645 5922 2.555199 CGATGCCTCTCGAAAAAGGAT 58.445 47.619 11.34 3.63 41.12 3.24
2646 5923 3.717707 CGATGCCTCTCGAAAAAGGATA 58.282 45.455 11.34 1.59 41.12 2.59
2647 5924 4.119862 CGATGCCTCTCGAAAAAGGATAA 58.880 43.478 11.34 0.00 41.12 1.75
2648 5925 4.570772 CGATGCCTCTCGAAAAAGGATAAA 59.429 41.667 11.34 0.00 41.12 1.40
2649 5926 5.064707 CGATGCCTCTCGAAAAAGGATAAAA 59.935 40.000 11.34 0.00 41.12 1.52
2650 5927 6.403200 CGATGCCTCTCGAAAAAGGATAAAAA 60.403 38.462 11.34 0.00 41.12 1.94
2683 5960 8.958119 TTTTTCTTCTACGTGAGGCATATATT 57.042 30.769 0.00 0.00 0.00 1.28
2684 5961 8.958119 TTTTCTTCTACGTGAGGCATATATTT 57.042 30.769 0.00 0.00 0.00 1.40
2685 5962 7.946655 TTCTTCTACGTGAGGCATATATTTG 57.053 36.000 0.00 0.00 0.00 2.32
2686 5963 5.926542 TCTTCTACGTGAGGCATATATTTGC 59.073 40.000 9.42 9.42 42.01 3.68
2687 5964 5.468540 TCTACGTGAGGCATATATTTGCT 57.531 39.130 16.28 4.40 42.38 3.91
2688 5965 5.853936 TCTACGTGAGGCATATATTTGCTT 58.146 37.500 16.28 9.99 42.38 3.91
2689 5966 5.926542 TCTACGTGAGGCATATATTTGCTTC 59.073 40.000 19.03 19.03 45.88 3.86
2690 5967 4.708177 ACGTGAGGCATATATTTGCTTCT 58.292 39.130 23.73 12.32 45.87 2.85
2691 5968 4.752101 ACGTGAGGCATATATTTGCTTCTC 59.248 41.667 23.73 20.17 45.87 2.87
2692 5969 4.751600 CGTGAGGCATATATTTGCTTCTCA 59.248 41.667 23.73 20.28 45.87 3.27
2693 5970 5.333645 CGTGAGGCATATATTTGCTTCTCAC 60.334 44.000 27.83 27.83 46.79 3.51
2694 5971 4.751600 TGAGGCATATATTTGCTTCTCACG 59.248 41.667 23.73 0.00 45.87 4.35
2695 5972 4.067896 AGGCATATATTTGCTTCTCACGG 58.932 43.478 16.28 0.00 42.38 4.94
2696 5973 4.065088 GGCATATATTTGCTTCTCACGGA 58.935 43.478 16.28 0.00 42.38 4.69
2697 5974 4.153117 GGCATATATTTGCTTCTCACGGAG 59.847 45.833 16.28 0.00 42.38 4.63
2698 5975 4.153117 GCATATATTTGCTTCTCACGGAGG 59.847 45.833 10.52 0.00 39.57 4.30
2699 5976 2.024176 TATTTGCTTCTCACGGAGGC 57.976 50.000 1.76 0.00 45.68 4.70
2703 5980 3.997672 GCTTCTCACGGAGGCATAT 57.002 52.632 1.76 0.00 44.96 1.78
2704 5981 1.506493 GCTTCTCACGGAGGCATATG 58.494 55.000 0.00 0.00 44.96 1.78
2705 5982 1.202580 GCTTCTCACGGAGGCATATGT 60.203 52.381 4.29 0.00 44.96 2.29
2706 5983 2.743183 GCTTCTCACGGAGGCATATGTT 60.743 50.000 4.29 0.00 44.96 2.71
2707 5984 3.535561 CTTCTCACGGAGGCATATGTTT 58.464 45.455 4.29 0.00 0.00 2.83
2708 5985 3.627395 TCTCACGGAGGCATATGTTTT 57.373 42.857 4.29 0.00 0.00 2.43
2709 5986 3.950397 TCTCACGGAGGCATATGTTTTT 58.050 40.909 4.29 0.00 0.00 1.94
2710 5987 3.938963 TCTCACGGAGGCATATGTTTTTC 59.061 43.478 4.29 0.00 0.00 2.29
2711 5988 2.675844 TCACGGAGGCATATGTTTTTCG 59.324 45.455 4.29 3.77 0.00 3.46
2712 5989 1.400494 ACGGAGGCATATGTTTTTCGC 59.600 47.619 4.29 0.00 0.00 4.70
2713 5990 1.594518 CGGAGGCATATGTTTTTCGCG 60.595 52.381 0.00 0.00 0.00 5.87
2714 5991 1.668751 GGAGGCATATGTTTTTCGCGA 59.331 47.619 3.71 3.71 0.00 5.87
2715 5992 2.096819 GGAGGCATATGTTTTTCGCGAA 59.903 45.455 19.38 19.38 0.00 4.70
2716 5993 3.426963 GGAGGCATATGTTTTTCGCGAAA 60.427 43.478 29.22 29.22 0.00 3.46
2717 5994 3.758300 AGGCATATGTTTTTCGCGAAAG 58.242 40.909 30.60 19.61 0.00 2.62
2718 5995 2.851824 GGCATATGTTTTTCGCGAAAGG 59.148 45.455 30.60 14.48 0.00 3.11
2719 5996 2.278875 GCATATGTTTTTCGCGAAAGGC 59.721 45.455 30.60 25.82 38.69 4.35
2720 5997 3.497118 CATATGTTTTTCGCGAAAGGCA 58.503 40.909 30.60 29.58 43.84 4.75
2721 5998 1.766069 ATGTTTTTCGCGAAAGGCAC 58.234 45.000 30.60 26.37 43.84 5.01
2722 5999 0.452184 TGTTTTTCGCGAAAGGCACA 59.548 45.000 30.60 28.20 43.84 4.57
2723 6000 1.135373 TGTTTTTCGCGAAAGGCACAA 60.135 42.857 30.60 20.40 43.84 3.33
2724 6001 1.254313 GTTTTTCGCGAAAGGCACAAC 59.746 47.619 30.60 26.21 43.84 3.32
2725 6002 0.736053 TTTTCGCGAAAGGCACAACT 59.264 45.000 30.60 0.00 43.84 3.16
2726 6003 0.306533 TTTCGCGAAAGGCACAACTC 59.693 50.000 29.22 0.00 43.84 3.01
2727 6004 0.531974 TTCGCGAAAGGCACAACTCT 60.532 50.000 21.14 0.00 43.84 3.24
2728 6005 1.205064 CGCGAAAGGCACAACTCTG 59.795 57.895 0.00 0.00 43.84 3.35
2729 6006 1.081840 GCGAAAGGCACAACTCTGC 60.082 57.895 0.00 0.00 42.87 4.26
2730 6007 1.205064 CGAAAGGCACAACTCTGCG 59.795 57.895 0.00 0.00 38.12 5.18
2731 6008 1.498865 CGAAAGGCACAACTCTGCGT 61.499 55.000 0.00 0.00 38.12 5.24
2732 6009 0.235926 GAAAGGCACAACTCTGCGTC 59.764 55.000 0.00 0.00 38.12 5.19
2733 6010 0.179045 AAAGGCACAACTCTGCGTCT 60.179 50.000 0.00 0.00 38.12 4.18
2734 6011 0.601311 AAGGCACAACTCTGCGTCTC 60.601 55.000 0.00 0.00 38.12 3.36
2735 6012 1.300931 GGCACAACTCTGCGTCTCA 60.301 57.895 0.00 0.00 38.12 3.27
2736 6013 0.880278 GGCACAACTCTGCGTCTCAA 60.880 55.000 0.00 0.00 38.12 3.02
2737 6014 0.937304 GCACAACTCTGCGTCTCAAA 59.063 50.000 0.00 0.00 0.00 2.69
2738 6015 1.330521 GCACAACTCTGCGTCTCAAAA 59.669 47.619 0.00 0.00 0.00 2.44
2739 6016 2.223249 GCACAACTCTGCGTCTCAAAAA 60.223 45.455 0.00 0.00 0.00 1.94
2740 6017 3.548818 GCACAACTCTGCGTCTCAAAAAT 60.549 43.478 0.00 0.00 0.00 1.82
2741 6018 4.319477 GCACAACTCTGCGTCTCAAAAATA 60.319 41.667 0.00 0.00 0.00 1.40
2742 6019 5.377358 CACAACTCTGCGTCTCAAAAATAG 58.623 41.667 0.00 0.00 0.00 1.73
2743 6020 5.177511 CACAACTCTGCGTCTCAAAAATAGA 59.822 40.000 0.00 0.00 0.00 1.98
2744 6021 5.758296 ACAACTCTGCGTCTCAAAAATAGAA 59.242 36.000 0.00 0.00 0.00 2.10
2745 6022 6.260050 ACAACTCTGCGTCTCAAAAATAGAAA 59.740 34.615 0.00 0.00 0.00 2.52
2746 6023 6.861065 ACTCTGCGTCTCAAAAATAGAAAA 57.139 33.333 0.00 0.00 0.00 2.29
2747 6024 7.259290 ACTCTGCGTCTCAAAAATAGAAAAA 57.741 32.000 0.00 0.00 0.00 1.94
2748 6025 7.355778 ACTCTGCGTCTCAAAAATAGAAAAAG 58.644 34.615 0.00 0.00 0.00 2.27
2749 6026 6.668323 TCTGCGTCTCAAAAATAGAAAAAGG 58.332 36.000 0.00 0.00 0.00 3.11
2750 6027 6.485313 TCTGCGTCTCAAAAATAGAAAAAGGA 59.515 34.615 0.00 0.00 0.00 3.36
2751 6028 7.174946 TCTGCGTCTCAAAAATAGAAAAAGGAT 59.825 33.333 0.00 0.00 0.00 3.24
2752 6029 7.083858 TGCGTCTCAAAAATAGAAAAAGGATG 58.916 34.615 0.00 0.00 0.00 3.51
2753 6030 7.084486 GCGTCTCAAAAATAGAAAAAGGATGT 58.916 34.615 0.00 0.00 0.00 3.06
2754 6031 7.061094 GCGTCTCAAAAATAGAAAAAGGATGTG 59.939 37.037 0.00 0.00 0.00 3.21
2755 6032 8.076178 CGTCTCAAAAATAGAAAAAGGATGTGT 58.924 33.333 0.00 0.00 0.00 3.72
2756 6033 9.399403 GTCTCAAAAATAGAAAAAGGATGTGTC 57.601 33.333 0.00 0.00 0.00 3.67
2757 6034 9.354673 TCTCAAAAATAGAAAAAGGATGTGTCT 57.645 29.630 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.067060 GGGCTTATTTGGCGCCTTAAG 59.933 52.381 29.70 27.61 43.29 1.85
8 9 2.801859 GGGCTTATTTGGCGCCTTA 58.198 52.632 29.70 16.06 43.29 2.69
9 10 3.616086 GGGCTTATTTGGCGCCTT 58.384 55.556 29.70 15.01 43.29 4.35
12 13 1.604147 AACTGGGGCTTATTTGGCGC 61.604 55.000 0.00 0.00 43.80 6.53
13 14 0.173255 CAACTGGGGCTTATTTGGCG 59.827 55.000 0.00 0.00 0.00 5.69
14 15 1.204704 GTCAACTGGGGCTTATTTGGC 59.795 52.381 0.00 0.00 0.00 4.52
15 16 2.493278 CTGTCAACTGGGGCTTATTTGG 59.507 50.000 0.00 0.00 0.00 3.28
16 17 2.094545 GCTGTCAACTGGGGCTTATTTG 60.095 50.000 0.00 0.00 0.00 2.32
17 18 2.171003 GCTGTCAACTGGGGCTTATTT 58.829 47.619 0.00 0.00 0.00 1.40
18 19 1.075374 TGCTGTCAACTGGGGCTTATT 59.925 47.619 0.00 0.00 0.00 1.40
19 20 0.698238 TGCTGTCAACTGGGGCTTAT 59.302 50.000 0.00 0.00 0.00 1.73
20 21 0.476338 TTGCTGTCAACTGGGGCTTA 59.524 50.000 0.00 0.00 0.00 3.09
21 22 1.109323 GTTGCTGTCAACTGGGGCTT 61.109 55.000 7.42 0.00 46.81 4.35
22 23 1.529244 GTTGCTGTCAACTGGGGCT 60.529 57.895 7.42 0.00 46.81 5.19
23 24 3.042560 GTTGCTGTCAACTGGGGC 58.957 61.111 7.42 0.00 46.81 5.80
30 31 1.679139 CCTCAACCAGTTGCTGTCAA 58.321 50.000 5.63 0.00 40.24 3.18
31 32 0.179020 CCCTCAACCAGTTGCTGTCA 60.179 55.000 5.63 0.00 40.24 3.58
32 33 0.890996 CCCCTCAACCAGTTGCTGTC 60.891 60.000 5.63 0.00 40.24 3.51
33 34 1.151450 CCCCTCAACCAGTTGCTGT 59.849 57.895 5.63 0.00 40.24 4.40
34 35 0.400213 TACCCCTCAACCAGTTGCTG 59.600 55.000 5.63 1.78 40.24 4.41
35 36 0.693049 CTACCCCTCAACCAGTTGCT 59.307 55.000 5.63 0.00 40.24 3.91
36 37 0.960861 GCTACCCCTCAACCAGTTGC 60.961 60.000 5.63 0.00 40.24 4.17
37 38 0.322546 GGCTACCCCTCAACCAGTTG 60.323 60.000 4.09 4.09 41.71 3.16
38 39 2.075837 GGCTACCCCTCAACCAGTT 58.924 57.895 0.00 0.00 0.00 3.16
39 40 3.821886 GGCTACCCCTCAACCAGT 58.178 61.111 0.00 0.00 0.00 4.00
49 50 2.125106 CTCACGCAAGGGCTACCC 60.125 66.667 0.00 0.00 45.90 3.69
50 51 2.820037 GCTCACGCAAGGGCTACC 60.820 66.667 0.00 0.00 43.99 3.18
51 52 2.820037 GGCTCACGCAAGGGCTAC 60.820 66.667 0.00 0.00 43.99 3.58
52 53 4.096003 GGGCTCACGCAAGGGCTA 62.096 66.667 0.00 0.00 43.99 3.93
58 59 1.067250 GCTTTTTGGGCTCACGCAA 59.933 52.632 0.00 0.00 45.96 4.85
59 60 2.727544 GCTTTTTGGGCTCACGCA 59.272 55.556 0.00 0.00 38.10 5.24
60 61 2.429069 CGCTTTTTGGGCTCACGC 60.429 61.111 0.00 0.00 0.00 5.34
61 62 1.082104 GACGCTTTTTGGGCTCACG 60.082 57.895 0.00 0.00 0.00 4.35
62 63 0.317854 GTGACGCTTTTTGGGCTCAC 60.318 55.000 0.00 0.00 34.98 3.51
63 64 1.452145 GGTGACGCTTTTTGGGCTCA 61.452 55.000 0.00 0.00 0.00 4.26
64 65 1.172812 AGGTGACGCTTTTTGGGCTC 61.173 55.000 0.00 0.00 0.00 4.70
65 66 1.152756 AGGTGACGCTTTTTGGGCT 60.153 52.632 0.00 0.00 0.00 5.19
66 67 1.007387 CAGGTGACGCTTTTTGGGC 60.007 57.895 0.00 0.00 0.00 5.36
67 68 1.659794 CCAGGTGACGCTTTTTGGG 59.340 57.895 0.00 0.00 0.00 4.12
68 69 1.106944 ACCCAGGTGACGCTTTTTGG 61.107 55.000 0.00 0.00 0.00 3.28
69 70 0.744281 AACCCAGGTGACGCTTTTTG 59.256 50.000 0.00 0.00 0.00 2.44
70 71 0.744281 CAACCCAGGTGACGCTTTTT 59.256 50.000 0.00 0.00 0.00 1.94
71 72 1.106944 CCAACCCAGGTGACGCTTTT 61.107 55.000 0.00 0.00 0.00 2.27
72 73 1.528309 CCAACCCAGGTGACGCTTT 60.528 57.895 0.00 0.00 0.00 3.51
73 74 2.113139 CCAACCCAGGTGACGCTT 59.887 61.111 0.00 0.00 0.00 4.68
74 75 3.953775 CCCAACCCAGGTGACGCT 61.954 66.667 0.00 0.00 0.00 5.07
76 77 3.953775 AGCCCAACCCAGGTGACG 61.954 66.667 0.00 0.00 0.00 4.35
77 78 2.282462 CAGCCCAACCCAGGTGAC 60.282 66.667 0.00 0.00 33.32 3.67
78 79 2.449518 TCAGCCCAACCCAGGTGA 60.450 61.111 0.00 0.00 38.12 4.02
79 80 2.034687 CTCAGCCCAACCCAGGTG 59.965 66.667 0.00 0.00 0.00 4.00
80 81 2.121963 TCTCAGCCCAACCCAGGT 60.122 61.111 0.00 0.00 0.00 4.00
81 82 2.673523 CTCTCAGCCCAACCCAGG 59.326 66.667 0.00 0.00 0.00 4.45
82 83 2.045536 GCTCTCAGCCCAACCCAG 60.046 66.667 0.00 0.00 34.48 4.45
83 84 0.913934 TATGCTCTCAGCCCAACCCA 60.914 55.000 0.00 0.00 41.51 4.51
84 85 0.464554 GTATGCTCTCAGCCCAACCC 60.465 60.000 0.00 0.00 41.51 4.11
85 86 0.464554 GGTATGCTCTCAGCCCAACC 60.465 60.000 0.00 0.00 41.51 3.77
86 87 0.253044 TGGTATGCTCTCAGCCCAAC 59.747 55.000 0.00 0.00 41.51 3.77
87 88 0.253044 GTGGTATGCTCTCAGCCCAA 59.747 55.000 0.00 0.00 41.51 4.12
88 89 0.618680 AGTGGTATGCTCTCAGCCCA 60.619 55.000 0.00 0.00 41.51 5.36
89 90 0.543749 AAGTGGTATGCTCTCAGCCC 59.456 55.000 0.00 0.00 41.51 5.19
90 91 1.208052 TCAAGTGGTATGCTCTCAGCC 59.792 52.381 0.00 0.00 41.51 4.85
91 92 2.680312 TCAAGTGGTATGCTCTCAGC 57.320 50.000 0.00 0.00 42.82 4.26
92 93 2.871022 GCATCAAGTGGTATGCTCTCAG 59.129 50.000 0.00 0.00 44.08 3.35
93 94 2.739609 CGCATCAAGTGGTATGCTCTCA 60.740 50.000 5.83 0.00 45.03 3.27
94 95 1.863454 CGCATCAAGTGGTATGCTCTC 59.137 52.381 5.83 0.00 45.03 3.20
95 96 1.945387 CGCATCAAGTGGTATGCTCT 58.055 50.000 5.83 0.00 45.03 4.09
96 97 0.305922 GCGCATCAAGTGGTATGCTC 59.694 55.000 0.30 0.00 45.03 4.26
97 98 0.107508 AGCGCATCAAGTGGTATGCT 60.108 50.000 11.47 0.00 45.03 3.79
98 99 0.305922 GAGCGCATCAAGTGGTATGC 59.694 55.000 11.47 0.00 44.02 3.14
99 100 1.863454 GAGAGCGCATCAAGTGGTATG 59.137 52.381 11.47 0.00 38.83 2.39
100 101 1.482182 TGAGAGCGCATCAAGTGGTAT 59.518 47.619 11.47 0.00 38.83 2.73
101 102 0.894835 TGAGAGCGCATCAAGTGGTA 59.105 50.000 11.47 0.00 38.83 3.25
102 103 0.390866 CTGAGAGCGCATCAAGTGGT 60.391 55.000 11.47 0.00 41.97 4.16
103 104 1.703438 GCTGAGAGCGCATCAAGTGG 61.703 60.000 11.47 2.76 0.00 4.00
104 105 1.703438 GGCTGAGAGCGCATCAAGTG 61.703 60.000 11.47 3.13 43.62 3.16
105 106 1.449246 GGCTGAGAGCGCATCAAGT 60.449 57.895 11.47 0.00 43.62 3.16
106 107 1.449070 TGGCTGAGAGCGCATCAAG 60.449 57.895 11.47 8.66 43.62 3.02
107 108 1.742880 GTGGCTGAGAGCGCATCAA 60.743 57.895 11.47 0.00 43.62 2.57
108 109 2.125391 GTGGCTGAGAGCGCATCA 60.125 61.111 11.47 12.90 43.62 3.07
109 110 2.894387 GGTGGCTGAGAGCGCATC 60.894 66.667 11.47 8.08 43.62 3.91
110 111 4.827087 CGGTGGCTGAGAGCGCAT 62.827 66.667 11.47 0.00 43.62 4.73
114 115 4.479993 ATGGCGGTGGCTGAGAGC 62.480 66.667 0.00 0.00 41.46 4.09
115 116 2.513204 CATGGCGGTGGCTGAGAG 60.513 66.667 0.00 0.00 39.81 3.20
116 117 3.321648 ACATGGCGGTGGCTGAGA 61.322 61.111 0.00 0.00 39.81 3.27
117 118 3.129502 CACATGGCGGTGGCTGAG 61.130 66.667 0.00 0.00 39.81 3.35
118 119 3.899981 GACACATGGCGGTGGCTGA 62.900 63.158 12.79 0.00 43.65 4.26
119 120 3.434319 GACACATGGCGGTGGCTG 61.434 66.667 12.79 0.00 43.65 4.85
122 123 2.281414 TGTGACACATGGCGGTGG 60.281 61.111 3.56 0.00 43.08 4.61
123 124 1.597854 AGTGTGACACATGGCGGTG 60.598 57.895 18.95 7.47 44.35 4.94
124 125 1.597854 CAGTGTGACACATGGCGGT 60.598 57.895 18.95 0.00 36.74 5.68
125 126 2.327343 CCAGTGTGACACATGGCGG 61.327 63.158 18.95 6.37 36.74 6.13
126 127 2.327343 CCCAGTGTGACACATGGCG 61.327 63.158 18.95 11.73 36.74 5.69
127 128 2.629656 GCCCAGTGTGACACATGGC 61.630 63.158 25.46 25.46 42.62 4.40
128 129 2.327343 CGCCCAGTGTGACACATGG 61.327 63.158 18.95 19.75 36.74 3.66
129 130 2.969806 GCGCCCAGTGTGACACATG 61.970 63.158 18.95 12.47 36.74 3.21
130 131 2.669569 GCGCCCAGTGTGACACAT 60.670 61.111 18.95 0.00 36.74 3.21
131 132 3.807631 GAGCGCCCAGTGTGACACA 62.808 63.158 18.95 3.56 36.74 3.72
132 133 3.044305 GAGCGCCCAGTGTGACAC 61.044 66.667 7.83 7.83 34.10 3.67
133 134 4.314440 GGAGCGCCCAGTGTGACA 62.314 66.667 2.29 0.00 34.14 3.58
143 144 1.692411 AAATAATCCAAGGGAGCGCC 58.308 50.000 2.29 0.00 34.05 6.53
144 145 2.034685 GGAAAATAATCCAAGGGAGCGC 59.965 50.000 0.00 0.00 39.42 5.92
145 146 2.290641 CGGAAAATAATCCAAGGGAGCG 59.709 50.000 0.00 0.00 39.61 5.03
146 147 3.288092 ACGGAAAATAATCCAAGGGAGC 58.712 45.455 0.00 0.00 39.61 4.70
147 148 5.433526 TGTACGGAAAATAATCCAAGGGAG 58.566 41.667 0.00 0.00 39.61 4.30
148 149 5.438698 TGTACGGAAAATAATCCAAGGGA 57.561 39.130 0.00 0.00 39.61 4.20
149 150 5.592688 ACATGTACGGAAAATAATCCAAGGG 59.407 40.000 0.00 0.00 39.61 3.95
150 151 6.693315 ACATGTACGGAAAATAATCCAAGG 57.307 37.500 0.00 0.00 39.61 3.61
151 152 8.980143 AAAACATGTACGGAAAATAATCCAAG 57.020 30.769 0.00 0.00 39.61 3.61
152 153 8.798402 AGAAAACATGTACGGAAAATAATCCAA 58.202 29.630 0.00 0.00 39.61 3.53
153 154 8.240682 CAGAAAACATGTACGGAAAATAATCCA 58.759 33.333 0.00 0.00 39.61 3.41
154 155 7.700656 CCAGAAAACATGTACGGAAAATAATCC 59.299 37.037 0.00 0.00 36.05 3.01
155 156 8.241367 ACCAGAAAACATGTACGGAAAATAATC 58.759 33.333 0.00 0.00 0.00 1.75
156 157 8.117813 ACCAGAAAACATGTACGGAAAATAAT 57.882 30.769 0.00 0.00 0.00 1.28
157 158 7.513371 ACCAGAAAACATGTACGGAAAATAA 57.487 32.000 0.00 0.00 0.00 1.40
158 159 7.513371 AACCAGAAAACATGTACGGAAAATA 57.487 32.000 0.00 0.00 0.00 1.40
159 160 6.399639 AACCAGAAAACATGTACGGAAAAT 57.600 33.333 0.00 0.00 0.00 1.82
160 161 5.838531 AACCAGAAAACATGTACGGAAAA 57.161 34.783 0.00 0.00 0.00 2.29
161 162 5.357314 TCAAACCAGAAAACATGTACGGAAA 59.643 36.000 0.00 0.00 0.00 3.13
162 163 4.882427 TCAAACCAGAAAACATGTACGGAA 59.118 37.500 0.00 0.00 0.00 4.30
163 164 4.452825 TCAAACCAGAAAACATGTACGGA 58.547 39.130 0.00 0.00 0.00 4.69
164 165 4.513692 TCTCAAACCAGAAAACATGTACGG 59.486 41.667 0.00 0.00 0.00 4.02
165 166 5.465390 TCTCTCAAACCAGAAAACATGTACG 59.535 40.000 0.00 0.00 0.00 3.67
166 167 6.861065 TCTCTCAAACCAGAAAACATGTAC 57.139 37.500 0.00 0.00 0.00 2.90
167 168 8.463930 AATTCTCTCAAACCAGAAAACATGTA 57.536 30.769 0.00 0.00 32.40 2.29
168 169 6.966534 ATTCTCTCAAACCAGAAAACATGT 57.033 33.333 0.00 0.00 32.40 3.21
169 170 6.865205 GGAATTCTCTCAAACCAGAAAACATG 59.135 38.462 5.23 0.00 32.40 3.21
170 171 6.779539 AGGAATTCTCTCAAACCAGAAAACAT 59.220 34.615 5.23 0.00 32.40 2.71
171 172 6.129179 AGGAATTCTCTCAAACCAGAAAACA 58.871 36.000 5.23 0.00 32.40 2.83
172 173 6.641169 AGGAATTCTCTCAAACCAGAAAAC 57.359 37.500 5.23 0.00 32.40 2.43
173 174 8.940397 ATAAGGAATTCTCTCAAACCAGAAAA 57.060 30.769 5.23 0.00 32.40 2.29
174 175 8.940397 AATAAGGAATTCTCTCAAACCAGAAA 57.060 30.769 5.23 0.00 32.40 2.52
175 176 8.796475 CAAATAAGGAATTCTCTCAAACCAGAA 58.204 33.333 5.23 0.00 33.18 3.02
176 177 7.394359 CCAAATAAGGAATTCTCTCAAACCAGA 59.606 37.037 5.23 0.00 0.00 3.86
177 178 7.542025 CCAAATAAGGAATTCTCTCAAACCAG 58.458 38.462 5.23 0.00 0.00 4.00
178 179 6.071391 GCCAAATAAGGAATTCTCTCAAACCA 60.071 38.462 5.23 0.00 0.00 3.67
179 180 6.333416 GCCAAATAAGGAATTCTCTCAAACC 58.667 40.000 5.23 0.00 0.00 3.27
180 181 6.333416 GGCCAAATAAGGAATTCTCTCAAAC 58.667 40.000 5.23 0.00 0.00 2.93
181 182 5.422012 GGGCCAAATAAGGAATTCTCTCAAA 59.578 40.000 4.39 0.00 0.00 2.69
182 183 4.956075 GGGCCAAATAAGGAATTCTCTCAA 59.044 41.667 4.39 0.00 0.00 3.02
183 184 4.230502 AGGGCCAAATAAGGAATTCTCTCA 59.769 41.667 6.18 0.00 0.00 3.27
294 296 6.527372 GTGTTAACAGCAAAAACTAACGGAAA 59.473 34.615 8.98 0.00 0.00 3.13
441 457 1.533731 CGAGTCTCTTAGGGATCGAGC 59.466 57.143 7.75 0.00 32.13 5.03
442 458 3.114668 TCGAGTCTCTTAGGGATCGAG 57.885 52.381 10.82 0.00 34.57 4.04
443 459 3.557475 GGATCGAGTCTCTTAGGGATCGA 60.557 52.174 15.09 15.09 42.58 3.59
444 460 2.745281 GGATCGAGTCTCTTAGGGATCG 59.255 54.545 7.34 7.34 32.98 3.69
445 461 3.086282 GGGATCGAGTCTCTTAGGGATC 58.914 54.545 0.00 2.68 0.00 3.36
446 462 2.719705 AGGGATCGAGTCTCTTAGGGAT 59.280 50.000 0.00 0.00 32.10 3.85
447 463 2.136863 AGGGATCGAGTCTCTTAGGGA 58.863 52.381 0.00 0.00 32.10 4.20
448 464 2.668144 AGGGATCGAGTCTCTTAGGG 57.332 55.000 0.00 0.00 32.10 3.53
449 465 3.822167 GGTTAGGGATCGAGTCTCTTAGG 59.178 52.174 3.12 0.00 38.95 2.69
450 466 3.822167 GGGTTAGGGATCGAGTCTCTTAG 59.178 52.174 3.12 0.00 38.95 2.18
451 467 3.462579 AGGGTTAGGGATCGAGTCTCTTA 59.537 47.826 3.12 0.00 38.95 2.10
452 468 2.245287 AGGGTTAGGGATCGAGTCTCTT 59.755 50.000 3.12 0.00 38.95 2.85
453 469 1.854280 AGGGTTAGGGATCGAGTCTCT 59.146 52.381 0.00 0.00 41.71 3.10
454 470 2.368311 AGGGTTAGGGATCGAGTCTC 57.632 55.000 0.00 0.00 0.00 3.36
455 471 2.512896 TGTAGGGTTAGGGATCGAGTCT 59.487 50.000 0.00 0.00 0.00 3.24
456 472 2.622470 GTGTAGGGTTAGGGATCGAGTC 59.378 54.545 0.00 0.00 0.00 3.36
457 473 2.024655 TGTGTAGGGTTAGGGATCGAGT 60.025 50.000 0.00 0.00 0.00 4.18
552 1218 1.920835 GTGGCCTTCCTCCACCTCT 60.921 63.158 3.32 0.00 46.26 3.69
874 1916 5.596361 ACCCATCTCTAAGTACACTGATGAG 59.404 44.000 12.57 5.19 34.86 2.90
875 1917 5.519808 ACCCATCTCTAAGTACACTGATGA 58.480 41.667 12.57 0.00 34.86 2.92
899 1941 4.161001 GGATCCATCCTGTGAAAGCAAAAT 59.839 41.667 6.95 0.00 43.73 1.82
937 1980 5.851720 TGCCAAGCAATTTGATTTTCAGTA 58.148 33.333 0.00 0.00 39.21 2.74
999 2042 7.657354 TCAGTCGGAATCAATAACCTTATCATG 59.343 37.037 0.00 0.00 0.00 3.07
1403 4650 1.544246 GCTAACCTTGGCGGAAAACAT 59.456 47.619 0.00 0.00 36.31 2.71
2396 5673 3.628032 GGAAATCGGGCAAAAACCAAAAA 59.372 39.130 0.00 0.00 0.00 1.94
2397 5674 3.206964 GGAAATCGGGCAAAAACCAAAA 58.793 40.909 0.00 0.00 0.00 2.44
2398 5675 2.485657 GGGAAATCGGGCAAAAACCAAA 60.486 45.455 0.00 0.00 0.00 3.28
2399 5676 1.070914 GGGAAATCGGGCAAAAACCAA 59.929 47.619 0.00 0.00 0.00 3.67
2400 5677 0.682292 GGGAAATCGGGCAAAAACCA 59.318 50.000 0.00 0.00 0.00 3.67
2401 5678 0.036765 GGGGAAATCGGGCAAAAACC 60.037 55.000 0.00 0.00 0.00 3.27
2402 5679 0.682292 TGGGGAAATCGGGCAAAAAC 59.318 50.000 0.00 0.00 0.00 2.43
2403 5680 1.346068 CTTGGGGAAATCGGGCAAAAA 59.654 47.619 0.00 0.00 0.00 1.94
2404 5681 0.972883 CTTGGGGAAATCGGGCAAAA 59.027 50.000 0.00 0.00 0.00 2.44
2405 5682 0.902516 CCTTGGGGAAATCGGGCAAA 60.903 55.000 0.00 0.00 33.58 3.68
2406 5683 1.304879 CCTTGGGGAAATCGGGCAA 60.305 57.895 0.00 0.00 33.58 4.52
2407 5684 2.358619 CCTTGGGGAAATCGGGCA 59.641 61.111 0.00 0.00 33.58 5.36
2408 5685 2.052104 CACCTTGGGGAAATCGGGC 61.052 63.158 0.00 0.00 36.25 6.13
2409 5686 0.251608 AACACCTTGGGGAAATCGGG 60.252 55.000 0.00 0.00 36.25 5.14
2410 5687 1.627864 AAACACCTTGGGGAAATCGG 58.372 50.000 0.00 0.00 36.25 4.18
2411 5688 4.076394 TCTAAAACACCTTGGGGAAATCG 58.924 43.478 0.00 0.00 36.25 3.34
2412 5689 7.712204 TTATCTAAAACACCTTGGGGAAATC 57.288 36.000 0.00 0.00 36.25 2.17
2413 5690 8.499288 TTTTATCTAAAACACCTTGGGGAAAT 57.501 30.769 0.00 0.00 32.03 2.17
2414 5691 7.916077 TTTTATCTAAAACACCTTGGGGAAA 57.084 32.000 0.00 0.00 32.03 3.13
2415 5692 7.785506 TCTTTTTATCTAAAACACCTTGGGGAA 59.214 33.333 0.00 0.00 35.14 3.97
2416 5693 7.299134 TCTTTTTATCTAAAACACCTTGGGGA 58.701 34.615 0.00 0.00 35.14 4.81
2417 5694 7.533289 TCTTTTTATCTAAAACACCTTGGGG 57.467 36.000 0.00 0.00 35.14 4.96
2474 5751 5.231147 GCAAACATGTTGCTCTTACGAAAAA 59.769 36.000 12.82 0.00 41.87 1.94
2475 5752 4.737765 GCAAACATGTTGCTCTTACGAAAA 59.262 37.500 12.82 0.00 41.87 2.29
2476 5753 4.286910 GCAAACATGTTGCTCTTACGAAA 58.713 39.130 12.82 0.00 41.87 3.46
2477 5754 3.884169 GCAAACATGTTGCTCTTACGAA 58.116 40.909 12.82 0.00 41.87 3.85
2478 5755 3.536158 GCAAACATGTTGCTCTTACGA 57.464 42.857 12.82 0.00 41.87 3.43
2486 5763 2.540931 CCACAAGAAGCAAACATGTTGC 59.459 45.455 12.82 16.83 45.22 4.17
2487 5764 3.552699 CACCACAAGAAGCAAACATGTTG 59.447 43.478 12.82 7.69 0.00 3.33
2488 5765 3.430651 CCACCACAAGAAGCAAACATGTT 60.431 43.478 4.92 4.92 0.00 2.71
2489 5766 2.101249 CCACCACAAGAAGCAAACATGT 59.899 45.455 0.00 0.00 0.00 3.21
2490 5767 2.746269 CCACCACAAGAAGCAAACATG 58.254 47.619 0.00 0.00 0.00 3.21
2491 5768 1.069049 GCCACCACAAGAAGCAAACAT 59.931 47.619 0.00 0.00 0.00 2.71
2492 5769 0.459489 GCCACCACAAGAAGCAAACA 59.541 50.000 0.00 0.00 0.00 2.83
2493 5770 0.459489 TGCCACCACAAGAAGCAAAC 59.541 50.000 0.00 0.00 0.00 2.93
2494 5771 0.459489 GTGCCACCACAAGAAGCAAA 59.541 50.000 0.00 0.00 41.67 3.68
2495 5772 2.114638 GTGCCACCACAAGAAGCAA 58.885 52.632 0.00 0.00 41.67 3.91
2496 5773 3.840437 GTGCCACCACAAGAAGCA 58.160 55.556 0.00 0.00 41.67 3.91
2504 5781 0.104671 AAGCAAACATGTGCCACCAC 59.895 50.000 0.00 0.00 46.14 4.16
2505 5782 0.388659 GAAGCAAACATGTGCCACCA 59.611 50.000 0.00 0.00 46.14 4.17
2506 5783 0.319813 GGAAGCAAACATGTGCCACC 60.320 55.000 0.00 2.51 46.14 4.61
2507 5784 0.388659 TGGAAGCAAACATGTGCCAC 59.611 50.000 0.00 0.00 46.14 5.01
2508 5785 0.675083 CTGGAAGCAAACATGTGCCA 59.325 50.000 0.00 0.04 46.14 4.92
2509 5786 0.037975 CCTGGAAGCAAACATGTGCC 60.038 55.000 0.00 0.00 46.14 5.01
2510 5787 0.961019 TCCTGGAAGCAAACATGTGC 59.039 50.000 0.00 0.00 45.28 4.57
2511 5788 2.486982 CTCTCCTGGAAGCAAACATGTG 59.513 50.000 0.00 0.00 0.00 3.21
2512 5789 2.787994 CTCTCCTGGAAGCAAACATGT 58.212 47.619 0.00 0.00 0.00 3.21
2513 5790 1.471684 GCTCTCCTGGAAGCAAACATG 59.528 52.381 19.36 0.00 0.00 3.21
2514 5791 1.615384 GGCTCTCCTGGAAGCAAACAT 60.615 52.381 23.10 0.00 0.00 2.71
2515 5792 0.250901 GGCTCTCCTGGAAGCAAACA 60.251 55.000 23.10 0.00 0.00 2.83
2516 5793 0.250901 TGGCTCTCCTGGAAGCAAAC 60.251 55.000 23.10 12.44 0.00 2.93
2517 5794 0.250901 GTGGCTCTCCTGGAAGCAAA 60.251 55.000 23.10 13.36 0.00 3.68
2518 5795 1.376466 GTGGCTCTCCTGGAAGCAA 59.624 57.895 23.10 14.84 0.00 3.91
2519 5796 1.418097 TTGTGGCTCTCCTGGAAGCA 61.418 55.000 23.10 12.44 0.00 3.91
2520 5797 0.034670 ATTGTGGCTCTCCTGGAAGC 60.035 55.000 17.28 17.28 0.00 3.86
2521 5798 1.681166 CCATTGTGGCTCTCCTGGAAG 60.681 57.143 0.00 0.00 0.00 3.46
2522 5799 0.329261 CCATTGTGGCTCTCCTGGAA 59.671 55.000 0.00 0.00 0.00 3.53
2523 5800 0.842030 ACCATTGTGGCTCTCCTGGA 60.842 55.000 0.00 0.00 42.67 3.86
2524 5801 0.679002 CACCATTGTGGCTCTCCTGG 60.679 60.000 0.00 0.00 42.67 4.45
2525 5802 2.864114 CACCATTGTGGCTCTCCTG 58.136 57.895 0.00 0.00 42.67 3.86
2534 5811 3.318839 TCTTTTCAAGAGCCACCATTGTG 59.681 43.478 0.00 0.00 36.28 3.33
2535 5812 3.565307 TCTTTTCAAGAGCCACCATTGT 58.435 40.909 0.00 0.00 32.71 2.71
2536 5813 4.589216 TTCTTTTCAAGAGCCACCATTG 57.411 40.909 0.00 0.00 39.03 2.82
2537 5814 5.511888 CCATTTCTTTTCAAGAGCCACCATT 60.512 40.000 0.00 0.00 39.03 3.16
2538 5815 4.020839 CCATTTCTTTTCAAGAGCCACCAT 60.021 41.667 0.00 0.00 39.03 3.55
2539 5816 3.321682 CCATTTCTTTTCAAGAGCCACCA 59.678 43.478 0.00 0.00 39.03 4.17
2540 5817 3.573967 TCCATTTCTTTTCAAGAGCCACC 59.426 43.478 0.00 0.00 39.03 4.61
2541 5818 4.853924 TCCATTTCTTTTCAAGAGCCAC 57.146 40.909 0.00 0.00 39.03 5.01
2542 5819 5.867903 TTTCCATTTCTTTTCAAGAGCCA 57.132 34.783 0.00 0.00 39.03 4.75
2543 5820 9.440773 AATATTTTCCATTTCTTTTCAAGAGCC 57.559 29.630 0.00 0.00 39.03 4.70
2586 5863 5.766222 CCTCCATAAGAAGCAAATATGTGC 58.234 41.667 10.09 10.09 45.28 4.57
2587 5864 5.300034 TGCCTCCATAAGAAGCAAATATGTG 59.700 40.000 0.00 0.00 39.02 3.21
2588 5865 5.300286 GTGCCTCCATAAGAAGCAAATATGT 59.700 40.000 0.00 0.00 43.53 2.29
2589 5866 5.300034 TGTGCCTCCATAAGAAGCAAATATG 59.700 40.000 0.00 0.00 43.53 1.78
2590 5867 5.448654 TGTGCCTCCATAAGAAGCAAATAT 58.551 37.500 0.00 0.00 43.53 1.28
2591 5868 4.854173 TGTGCCTCCATAAGAAGCAAATA 58.146 39.130 0.00 0.00 43.53 1.40
2592 5869 3.698040 CTGTGCCTCCATAAGAAGCAAAT 59.302 43.478 0.00 0.00 43.53 2.32
2593 5870 3.084039 CTGTGCCTCCATAAGAAGCAAA 58.916 45.455 0.00 0.00 43.53 3.68
2594 5871 2.618816 CCTGTGCCTCCATAAGAAGCAA 60.619 50.000 0.00 0.00 43.53 3.91
2595 5872 1.065199 CCTGTGCCTCCATAAGAAGCA 60.065 52.381 0.00 0.00 39.69 3.91
2596 5873 1.210478 TCCTGTGCCTCCATAAGAAGC 59.790 52.381 0.00 0.00 32.08 3.86
2597 5874 3.853355 ATCCTGTGCCTCCATAAGAAG 57.147 47.619 0.00 0.00 0.00 2.85
2598 5875 3.889815 CAATCCTGTGCCTCCATAAGAA 58.110 45.455 0.00 0.00 0.00 2.52
2599 5876 2.421952 GCAATCCTGTGCCTCCATAAGA 60.422 50.000 0.00 0.00 38.66 2.10
2600 5877 1.952296 GCAATCCTGTGCCTCCATAAG 59.048 52.381 0.00 0.00 38.66 1.73
2601 5878 1.565759 AGCAATCCTGTGCCTCCATAA 59.434 47.619 0.00 0.00 46.14 1.90
2602 5879 1.216064 AGCAATCCTGTGCCTCCATA 58.784 50.000 0.00 0.00 46.14 2.74
2603 5880 0.333993 AAGCAATCCTGTGCCTCCAT 59.666 50.000 0.00 0.00 46.14 3.41
2604 5881 0.322816 GAAGCAATCCTGTGCCTCCA 60.323 55.000 0.00 0.00 46.14 3.86
2605 5882 1.372087 CGAAGCAATCCTGTGCCTCC 61.372 60.000 0.00 0.00 46.14 4.30
2606 5883 2.093216 CGAAGCAATCCTGTGCCTC 58.907 57.895 0.00 0.00 46.14 4.70
2607 5884 4.308526 CGAAGCAATCCTGTGCCT 57.691 55.556 0.00 0.00 46.14 4.75
2624 5901 0.375106 CCTTTTTCGAGAGGCATCGC 59.625 55.000 7.20 0.00 42.43 4.58
2625 5902 2.010145 TCCTTTTTCGAGAGGCATCG 57.990 50.000 5.85 5.85 44.07 3.84
2626 5903 6.436843 TTTTATCCTTTTTCGAGAGGCATC 57.563 37.500 6.68 0.00 32.93 3.91
2627 5904 6.834168 TTTTTATCCTTTTTCGAGAGGCAT 57.166 33.333 6.68 4.99 32.93 4.40
2658 5935 8.958119 AATATATGCCTCACGTAGAAGAAAAA 57.042 30.769 0.00 0.00 0.00 1.94
2659 5936 8.826710 CAAATATATGCCTCACGTAGAAGAAAA 58.173 33.333 0.00 0.00 0.00 2.29
2660 5937 7.042051 GCAAATATATGCCTCACGTAGAAGAAA 60.042 37.037 0.00 0.00 40.49 2.52
2661 5938 6.423905 GCAAATATATGCCTCACGTAGAAGAA 59.576 38.462 0.00 0.00 40.49 2.52
2662 5939 5.926542 GCAAATATATGCCTCACGTAGAAGA 59.073 40.000 0.00 0.00 40.49 2.87
2663 5940 6.158175 GCAAATATATGCCTCACGTAGAAG 57.842 41.667 0.00 0.00 40.49 2.85
2667 5944 8.423647 GTGAGAAGCAAATATATGCCTCACGTA 61.424 40.741 16.92 0.00 46.07 3.57
2668 5945 7.669980 GTGAGAAGCAAATATATGCCTCACGT 61.670 42.308 16.92 0.00 46.07 4.49
2669 5946 5.333645 GTGAGAAGCAAATATATGCCTCACG 60.334 44.000 16.92 0.00 46.07 4.35
2675 5952 4.153117 CCTCCGTGAGAAGCAAATATATGC 59.847 45.833 2.84 0.00 46.78 3.14
2676 5953 4.153117 GCCTCCGTGAGAAGCAAATATATG 59.847 45.833 2.84 0.00 0.00 1.78
2677 5954 4.202357 TGCCTCCGTGAGAAGCAAATATAT 60.202 41.667 2.84 0.00 0.00 0.86
2678 5955 3.133901 TGCCTCCGTGAGAAGCAAATATA 59.866 43.478 2.84 0.00 0.00 0.86
2679 5956 2.092968 TGCCTCCGTGAGAAGCAAATAT 60.093 45.455 2.84 0.00 0.00 1.28
2680 5957 1.277842 TGCCTCCGTGAGAAGCAAATA 59.722 47.619 2.84 0.00 0.00 1.40
2681 5958 0.036732 TGCCTCCGTGAGAAGCAAAT 59.963 50.000 2.84 0.00 0.00 2.32
2682 5959 0.036732 ATGCCTCCGTGAGAAGCAAA 59.963 50.000 8.19 0.00 32.52 3.68
2683 5960 0.901827 TATGCCTCCGTGAGAAGCAA 59.098 50.000 8.19 0.00 32.52 3.91
2684 5961 1.123077 ATATGCCTCCGTGAGAAGCA 58.877 50.000 2.84 5.26 33.08 3.91
2685 5962 1.202580 ACATATGCCTCCGTGAGAAGC 60.203 52.381 1.58 0.31 0.00 3.86
2686 5963 2.898729 ACATATGCCTCCGTGAGAAG 57.101 50.000 1.58 0.00 0.00 2.85
2687 5964 3.627395 AAACATATGCCTCCGTGAGAA 57.373 42.857 1.58 0.00 0.00 2.87
2688 5965 3.627395 AAAACATATGCCTCCGTGAGA 57.373 42.857 1.58 0.00 0.00 3.27
2689 5966 3.242413 CGAAAAACATATGCCTCCGTGAG 60.242 47.826 1.58 0.00 0.00 3.51
2690 5967 2.675844 CGAAAAACATATGCCTCCGTGA 59.324 45.455 1.58 0.00 0.00 4.35
2691 5968 2.791158 GCGAAAAACATATGCCTCCGTG 60.791 50.000 1.58 0.00 0.00 4.94
2692 5969 1.400494 GCGAAAAACATATGCCTCCGT 59.600 47.619 1.58 0.00 0.00 4.69
2693 5970 1.594518 CGCGAAAAACATATGCCTCCG 60.595 52.381 0.00 1.96 0.00 4.63
2694 5971 1.668751 TCGCGAAAAACATATGCCTCC 59.331 47.619 6.20 0.00 0.00 4.30
2695 5972 3.398954 TTCGCGAAAAACATATGCCTC 57.601 42.857 21.14 0.00 0.00 4.70
2696 5973 3.427503 CCTTTCGCGAAAAACATATGCCT 60.428 43.478 31.68 0.00 0.00 4.75
2697 5974 2.851824 CCTTTCGCGAAAAACATATGCC 59.148 45.455 31.68 0.00 0.00 4.40
2698 5975 2.278875 GCCTTTCGCGAAAAACATATGC 59.721 45.455 31.68 20.66 0.00 3.14
2699 5976 3.300590 GTGCCTTTCGCGAAAAACATATG 59.699 43.478 31.68 19.13 42.08 1.78
2700 5977 3.057876 TGTGCCTTTCGCGAAAAACATAT 60.058 39.130 31.68 0.00 42.08 1.78
2701 5978 2.290916 TGTGCCTTTCGCGAAAAACATA 59.709 40.909 31.68 25.70 42.08 2.29
2702 5979 1.066303 TGTGCCTTTCGCGAAAAACAT 59.934 42.857 31.68 0.00 42.08 2.71
2703 5980 0.452184 TGTGCCTTTCGCGAAAAACA 59.548 45.000 31.68 29.04 42.08 2.83
2704 5981 1.254313 GTTGTGCCTTTCGCGAAAAAC 59.746 47.619 31.68 26.70 42.08 2.43
2705 5982 1.133407 AGTTGTGCCTTTCGCGAAAAA 59.867 42.857 31.68 20.94 42.08 1.94
2706 5983 0.736053 AGTTGTGCCTTTCGCGAAAA 59.264 45.000 31.68 17.11 42.08 2.29
2707 5984 0.306533 GAGTTGTGCCTTTCGCGAAA 59.693 50.000 30.47 30.47 42.08 3.46
2708 5985 0.531974 AGAGTTGTGCCTTTCGCGAA 60.532 50.000 19.38 19.38 42.08 4.70
2709 5986 1.069090 AGAGTTGTGCCTTTCGCGA 59.931 52.632 3.71 3.71 42.08 5.87
2710 5987 1.205064 CAGAGTTGTGCCTTTCGCG 59.795 57.895 0.00 0.00 42.08 5.87
2711 5988 1.081840 GCAGAGTTGTGCCTTTCGC 60.082 57.895 0.00 0.00 37.49 4.70
2712 5989 1.205064 CGCAGAGTTGTGCCTTTCG 59.795 57.895 0.00 0.00 40.62 3.46
2713 5990 0.235926 GACGCAGAGTTGTGCCTTTC 59.764 55.000 0.00 0.00 40.62 2.62
2714 5991 0.179045 AGACGCAGAGTTGTGCCTTT 60.179 50.000 0.00 0.00 40.62 3.11
2715 5992 0.601311 GAGACGCAGAGTTGTGCCTT 60.601 55.000 0.00 0.00 40.62 4.35
2716 5993 1.005630 GAGACGCAGAGTTGTGCCT 60.006 57.895 0.00 0.00 40.62 4.75
2717 5994 0.880278 TTGAGACGCAGAGTTGTGCC 60.880 55.000 0.00 0.00 40.62 5.01
2718 5995 0.937304 TTTGAGACGCAGAGTTGTGC 59.063 50.000 0.00 0.00 38.39 4.57
2719 5996 3.673746 TTTTTGAGACGCAGAGTTGTG 57.326 42.857 0.00 0.00 40.66 3.33
2720 5997 5.297547 TCTATTTTTGAGACGCAGAGTTGT 58.702 37.500 0.00 0.00 0.00 3.32
2721 5998 5.845985 TCTATTTTTGAGACGCAGAGTTG 57.154 39.130 0.00 0.00 0.00 3.16
2722 5999 6.861065 TTTCTATTTTTGAGACGCAGAGTT 57.139 33.333 0.00 0.00 0.00 3.01
2723 6000 6.861065 TTTTCTATTTTTGAGACGCAGAGT 57.139 33.333 0.00 0.00 0.00 3.24
2724 6001 6.798959 CCTTTTTCTATTTTTGAGACGCAGAG 59.201 38.462 0.00 0.00 0.00 3.35
2725 6002 6.485313 TCCTTTTTCTATTTTTGAGACGCAGA 59.515 34.615 0.00 0.00 0.00 4.26
2726 6003 6.668323 TCCTTTTTCTATTTTTGAGACGCAG 58.332 36.000 0.00 0.00 0.00 5.18
2727 6004 6.627395 TCCTTTTTCTATTTTTGAGACGCA 57.373 33.333 0.00 0.00 0.00 5.24
2728 6005 7.061094 CACATCCTTTTTCTATTTTTGAGACGC 59.939 37.037 0.00 0.00 0.00 5.19
2729 6006 8.076178 ACACATCCTTTTTCTATTTTTGAGACG 58.924 33.333 0.00 0.00 0.00 4.18
2730 6007 9.399403 GACACATCCTTTTTCTATTTTTGAGAC 57.601 33.333 0.00 0.00 0.00 3.36
2731 6008 9.354673 AGACACATCCTTTTTCTATTTTTGAGA 57.645 29.630 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.