Multiple sequence alignment - TraesCS7D01G358200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G358200 chr7D 100.000 2414 0 0 1 2414 461207993 461205580 0.000000e+00 4458.0
1 TraesCS7D01G358200 chr7B 91.453 1790 80 27 686 2414 483776509 483774732 0.000000e+00 2390.0
2 TraesCS7D01G358200 chr7B 87.603 121 13 1 2296 2414 483775112 483774992 3.240000e-29 139.0
3 TraesCS7D01G358200 chr7A 90.094 1282 85 19 497 1746 538781581 538782852 0.000000e+00 1626.0
4 TraesCS7D01G358200 chr7A 89.401 434 37 7 1988 2414 538783284 538783715 2.730000e-149 538.0
5 TraesCS7D01G358200 chr7A 92.000 225 15 3 1749 1973 538782887 538783108 1.800000e-81 313.0
6 TraesCS7D01G358200 chr7A 88.462 130 13 2 2286 2414 538783327 538783455 3.210000e-34 156.0
7 TraesCS7D01G358200 chr3D 87.826 115 11 3 292 404 6813954 6814067 5.420000e-27 132.0
8 TraesCS7D01G358200 chr2A 89.091 55 1 4 591 645 740080073 740080122 2.000000e-06 63.9
9 TraesCS7D01G358200 chr2A 89.091 55 1 4 591 645 740119917 740119966 2.000000e-06 63.9
10 TraesCS7D01G358200 chr2A 89.091 55 1 4 591 645 740144105 740144154 2.000000e-06 63.9
11 TraesCS7D01G358200 chr1D 100.000 31 0 0 589 619 30286439 30286469 9.320000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G358200 chr7D 461205580 461207993 2413 True 4458.00 4458 100.00000 1 2414 1 chr7D.!!$R1 2413
1 TraesCS7D01G358200 chr7B 483774732 483776509 1777 True 1264.50 2390 89.52800 686 2414 2 chr7B.!!$R1 1728
2 TraesCS7D01G358200 chr7A 538781581 538783715 2134 False 658.25 1626 89.98925 497 2414 4 chr7A.!!$F1 1917

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
70 71 0.038159 AGCAACTAGTCGACTGGTGC 60.038 55.0 32.57 32.57 37.75 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1679 1728 0.249868 TCACTTCTCAACAGGGCACG 60.25 55.0 0.0 0.0 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 4.609247 CGCCTCGATCCGTCCGTC 62.609 72.222 0.00 0.00 0.00 4.79
38 39 4.609247 GCCTCGATCCGTCCGTCG 62.609 72.222 0.00 0.00 39.11 5.12
39 40 4.609247 CCTCGATCCGTCCGTCGC 62.609 72.222 0.00 0.00 37.74 5.19
40 41 3.574445 CTCGATCCGTCCGTCGCT 61.574 66.667 0.00 0.00 37.74 4.93
41 42 3.791928 CTCGATCCGTCCGTCGCTG 62.792 68.421 0.00 0.00 37.74 5.18
42 43 4.175489 CGATCCGTCCGTCGCTGT 62.175 66.667 0.00 0.00 38.35 4.40
43 44 2.816360 CGATCCGTCCGTCGCTGTA 61.816 63.158 0.00 0.00 38.35 2.74
44 45 1.298190 GATCCGTCCGTCGCTGTAC 60.298 63.158 0.00 0.00 38.35 2.90
45 46 2.659017 GATCCGTCCGTCGCTGTACC 62.659 65.000 0.00 0.00 38.35 3.34
46 47 3.437795 CCGTCCGTCGCTGTACCT 61.438 66.667 0.00 0.00 38.35 3.08
47 48 2.564975 CGTCCGTCGCTGTACCTT 59.435 61.111 0.00 0.00 0.00 3.50
48 49 1.513586 CGTCCGTCGCTGTACCTTC 60.514 63.158 0.00 0.00 0.00 3.46
49 50 1.881602 GTCCGTCGCTGTACCTTCT 59.118 57.895 0.00 0.00 0.00 2.85
50 51 0.456312 GTCCGTCGCTGTACCTTCTG 60.456 60.000 0.00 0.00 0.00 3.02
51 52 0.607217 TCCGTCGCTGTACCTTCTGA 60.607 55.000 0.00 0.00 0.00 3.27
52 53 0.179161 CCGTCGCTGTACCTTCTGAG 60.179 60.000 0.00 0.00 0.00 3.35
53 54 0.798771 CGTCGCTGTACCTTCTGAGC 60.799 60.000 0.00 0.00 0.00 4.26
54 55 0.243907 GTCGCTGTACCTTCTGAGCA 59.756 55.000 0.00 0.00 0.00 4.26
55 56 0.966179 TCGCTGTACCTTCTGAGCAA 59.034 50.000 0.00 0.00 0.00 3.91
56 57 1.071605 CGCTGTACCTTCTGAGCAAC 58.928 55.000 0.00 0.00 0.00 4.17
57 58 1.337260 CGCTGTACCTTCTGAGCAACT 60.337 52.381 0.00 0.00 0.00 3.16
58 59 2.094700 CGCTGTACCTTCTGAGCAACTA 60.095 50.000 0.00 0.00 0.00 2.24
59 60 3.516615 GCTGTACCTTCTGAGCAACTAG 58.483 50.000 0.00 0.00 0.00 2.57
60 61 3.056465 GCTGTACCTTCTGAGCAACTAGT 60.056 47.826 0.00 0.00 0.00 2.57
61 62 4.739195 CTGTACCTTCTGAGCAACTAGTC 58.261 47.826 0.00 0.00 0.00 2.59
62 63 3.190744 TGTACCTTCTGAGCAACTAGTCG 59.809 47.826 0.00 0.00 0.00 4.18
63 64 2.515854 ACCTTCTGAGCAACTAGTCGA 58.484 47.619 0.00 0.00 0.00 4.20
64 65 2.229302 ACCTTCTGAGCAACTAGTCGAC 59.771 50.000 7.70 7.70 0.00 4.20
65 66 2.490115 CCTTCTGAGCAACTAGTCGACT 59.510 50.000 23.66 23.66 0.00 4.18
66 67 3.497118 CTTCTGAGCAACTAGTCGACTG 58.503 50.000 28.12 18.87 0.00 3.51
67 68 1.813178 TCTGAGCAACTAGTCGACTGG 59.187 52.381 28.12 26.74 0.00 4.00
68 69 1.542030 CTGAGCAACTAGTCGACTGGT 59.458 52.381 26.87 26.87 39.47 4.00
69 70 1.269723 TGAGCAACTAGTCGACTGGTG 59.730 52.381 31.76 25.91 37.75 4.17
70 71 0.038159 AGCAACTAGTCGACTGGTGC 60.038 55.000 32.57 32.57 37.75 5.01
71 72 0.319555 GCAACTAGTCGACTGGTGCA 60.320 55.000 33.61 16.04 37.75 4.57
72 73 1.673033 GCAACTAGTCGACTGGTGCAT 60.673 52.381 33.61 20.54 37.75 3.96
73 74 1.995484 CAACTAGTCGACTGGTGCATG 59.005 52.381 31.76 22.82 37.75 4.06
74 75 0.108615 ACTAGTCGACTGGTGCATGC 60.109 55.000 30.79 11.82 36.28 4.06
75 76 0.108662 CTAGTCGACTGGTGCATGCA 60.109 55.000 28.12 18.46 0.00 3.96
76 77 0.320050 TAGTCGACTGGTGCATGCAA 59.680 50.000 28.12 6.97 0.00 4.08
77 78 1.207593 GTCGACTGGTGCATGCAAC 59.792 57.895 29.01 29.01 0.00 4.17
78 79 1.071299 TCGACTGGTGCATGCAACT 59.929 52.632 34.07 17.39 34.17 3.16
79 80 0.534877 TCGACTGGTGCATGCAACTT 60.535 50.000 34.07 22.13 34.17 2.66
80 81 0.311790 CGACTGGTGCATGCAACTTT 59.688 50.000 34.07 21.76 34.17 2.66
81 82 1.269206 CGACTGGTGCATGCAACTTTT 60.269 47.619 34.07 19.23 34.17 2.27
82 83 2.129607 GACTGGTGCATGCAACTTTTG 58.870 47.619 34.07 22.67 34.17 2.44
83 84 1.481772 ACTGGTGCATGCAACTTTTGT 59.518 42.857 34.07 23.26 34.17 2.83
84 85 1.862201 CTGGTGCATGCAACTTTTGTG 59.138 47.619 34.07 14.41 34.17 3.33
85 86 1.206610 TGGTGCATGCAACTTTTGTGT 59.793 42.857 34.07 0.00 34.17 3.72
86 87 1.593933 GGTGCATGCAACTTTTGTGTG 59.406 47.619 28.48 0.00 0.00 3.82
87 88 2.270047 GTGCATGCAACTTTTGTGTGT 58.730 42.857 24.58 0.00 0.00 3.72
88 89 2.672381 GTGCATGCAACTTTTGTGTGTT 59.328 40.909 24.58 0.00 0.00 3.32
89 90 2.928757 TGCATGCAACTTTTGTGTGTTC 59.071 40.909 20.30 0.00 0.00 3.18
90 91 3.189285 GCATGCAACTTTTGTGTGTTCT 58.811 40.909 14.21 0.00 0.00 3.01
91 92 3.618150 GCATGCAACTTTTGTGTGTTCTT 59.382 39.130 14.21 0.00 0.00 2.52
92 93 4.093261 GCATGCAACTTTTGTGTGTTCTTT 59.907 37.500 14.21 0.00 0.00 2.52
93 94 5.724769 GCATGCAACTTTTGTGTGTTCTTTC 60.725 40.000 14.21 0.00 0.00 2.62
94 95 5.132897 TGCAACTTTTGTGTGTTCTTTCT 57.867 34.783 0.00 0.00 0.00 2.52
95 96 5.537188 TGCAACTTTTGTGTGTTCTTTCTT 58.463 33.333 0.00 0.00 0.00 2.52
96 97 5.633182 TGCAACTTTTGTGTGTTCTTTCTTC 59.367 36.000 0.00 0.00 0.00 2.87
97 98 5.863935 GCAACTTTTGTGTGTTCTTTCTTCT 59.136 36.000 0.00 0.00 0.00 2.85
98 99 6.366061 GCAACTTTTGTGTGTTCTTTCTTCTT 59.634 34.615 0.00 0.00 0.00 2.52
99 100 7.095649 GCAACTTTTGTGTGTTCTTTCTTCTTT 60.096 33.333 0.00 0.00 0.00 2.52
100 101 7.873739 ACTTTTGTGTGTTCTTTCTTCTTTG 57.126 32.000 0.00 0.00 0.00 2.77
101 102 6.868339 ACTTTTGTGTGTTCTTTCTTCTTTGG 59.132 34.615 0.00 0.00 0.00 3.28
102 103 5.975693 TTGTGTGTTCTTTCTTCTTTGGT 57.024 34.783 0.00 0.00 0.00 3.67
103 104 5.309323 TGTGTGTTCTTTCTTCTTTGGTG 57.691 39.130 0.00 0.00 0.00 4.17
104 105 4.157656 TGTGTGTTCTTTCTTCTTTGGTGG 59.842 41.667 0.00 0.00 0.00 4.61
105 106 3.130340 TGTGTTCTTTCTTCTTTGGTGGC 59.870 43.478 0.00 0.00 0.00 5.01
106 107 3.130340 GTGTTCTTTCTTCTTTGGTGGCA 59.870 43.478 0.00 0.00 0.00 4.92
107 108 3.960102 TGTTCTTTCTTCTTTGGTGGCAT 59.040 39.130 0.00 0.00 0.00 4.40
108 109 4.202141 TGTTCTTTCTTCTTTGGTGGCATG 60.202 41.667 0.00 0.00 0.00 4.06
109 110 2.297033 TCTTTCTTCTTTGGTGGCATGC 59.703 45.455 9.90 9.90 0.00 4.06
110 111 0.597568 TTCTTCTTTGGTGGCATGCG 59.402 50.000 12.44 0.00 0.00 4.73
111 112 1.213537 CTTCTTTGGTGGCATGCGG 59.786 57.895 12.44 0.00 0.00 5.69
112 113 2.824071 CTTCTTTGGTGGCATGCGGC 62.824 60.000 12.44 6.59 43.74 6.53
127 128 2.727544 GGCAACACCGCAACACAT 59.272 55.556 0.00 0.00 0.00 3.21
128 129 1.067250 GGCAACACCGCAACACATT 59.933 52.632 0.00 0.00 0.00 2.71
129 130 0.939106 GGCAACACCGCAACACATTC 60.939 55.000 0.00 0.00 0.00 2.67
130 131 0.939106 GCAACACCGCAACACATTCC 60.939 55.000 0.00 0.00 0.00 3.01
131 132 0.667993 CAACACCGCAACACATTCCT 59.332 50.000 0.00 0.00 0.00 3.36
132 133 0.667993 AACACCGCAACACATTCCTG 59.332 50.000 0.00 0.00 0.00 3.86
133 134 0.465460 ACACCGCAACACATTCCTGT 60.465 50.000 0.00 0.00 35.44 4.00
143 144 2.937591 CACATTCCTGTGTGCATCAAC 58.062 47.619 0.00 0.00 46.33 3.18
144 145 2.293955 CACATTCCTGTGTGCATCAACA 59.706 45.455 0.00 0.00 46.33 3.33
145 146 3.057104 CACATTCCTGTGTGCATCAACAT 60.057 43.478 0.00 0.00 46.33 2.71
146 147 3.575256 ACATTCCTGTGTGCATCAACATT 59.425 39.130 0.00 0.00 33.22 2.71
147 148 4.766373 ACATTCCTGTGTGCATCAACATTA 59.234 37.500 0.00 0.00 33.22 1.90
148 149 5.243507 ACATTCCTGTGTGCATCAACATTAA 59.756 36.000 0.00 0.00 33.22 1.40
149 150 5.375417 TTCCTGTGTGCATCAACATTAAG 57.625 39.130 0.00 0.00 31.49 1.85
150 151 3.191162 TCCTGTGTGCATCAACATTAAGC 59.809 43.478 0.00 0.00 31.49 3.09
151 152 3.192001 CCTGTGTGCATCAACATTAAGCT 59.808 43.478 0.00 0.00 31.49 3.74
152 153 4.409570 CTGTGTGCATCAACATTAAGCTC 58.590 43.478 0.00 0.00 31.49 4.09
153 154 4.074259 TGTGTGCATCAACATTAAGCTCT 58.926 39.130 0.00 0.00 31.49 4.09
154 155 4.083164 TGTGTGCATCAACATTAAGCTCTG 60.083 41.667 0.00 0.00 31.49 3.35
155 156 3.441222 TGTGCATCAACATTAAGCTCTGG 59.559 43.478 0.00 0.00 0.00 3.86
156 157 3.441572 GTGCATCAACATTAAGCTCTGGT 59.558 43.478 0.00 0.00 0.00 4.00
157 158 4.081406 TGCATCAACATTAAGCTCTGGTT 58.919 39.130 0.00 0.00 0.00 3.67
158 159 4.156556 TGCATCAACATTAAGCTCTGGTTC 59.843 41.667 0.00 0.00 0.00 3.62
159 160 4.397417 GCATCAACATTAAGCTCTGGTTCT 59.603 41.667 0.00 0.00 0.00 3.01
160 161 5.105997 GCATCAACATTAAGCTCTGGTTCTT 60.106 40.000 0.00 0.00 0.00 2.52
161 162 6.094048 GCATCAACATTAAGCTCTGGTTCTTA 59.906 38.462 0.00 0.00 0.00 2.10
162 163 7.678218 GCATCAACATTAAGCTCTGGTTCTTAG 60.678 40.741 0.00 0.00 0.00 2.18
163 164 6.769512 TCAACATTAAGCTCTGGTTCTTAGT 58.230 36.000 0.00 0.00 0.00 2.24
164 165 7.903145 TCAACATTAAGCTCTGGTTCTTAGTA 58.097 34.615 0.00 0.00 0.00 1.82
165 166 8.035394 TCAACATTAAGCTCTGGTTCTTAGTAG 58.965 37.037 0.00 0.00 0.00 2.57
166 167 6.342111 ACATTAAGCTCTGGTTCTTAGTAGC 58.658 40.000 0.00 0.00 0.00 3.58
167 168 5.995565 TTAAGCTCTGGTTCTTAGTAGCA 57.004 39.130 0.00 0.00 32.42 3.49
168 169 6.546428 TTAAGCTCTGGTTCTTAGTAGCAT 57.454 37.500 0.00 0.00 32.42 3.79
169 170 4.399004 AGCTCTGGTTCTTAGTAGCATG 57.601 45.455 0.00 0.00 32.42 4.06
170 171 4.026744 AGCTCTGGTTCTTAGTAGCATGA 58.973 43.478 0.00 0.00 32.42 3.07
171 172 4.653341 AGCTCTGGTTCTTAGTAGCATGAT 59.347 41.667 0.00 0.00 32.42 2.45
172 173 4.749099 GCTCTGGTTCTTAGTAGCATGATG 59.251 45.833 0.00 0.00 0.00 3.07
173 174 5.452496 GCTCTGGTTCTTAGTAGCATGATGA 60.452 44.000 0.00 0.00 0.00 2.92
174 175 6.737720 TCTGGTTCTTAGTAGCATGATGAT 57.262 37.500 0.00 0.00 0.00 2.45
175 176 7.129457 TCTGGTTCTTAGTAGCATGATGATT 57.871 36.000 0.00 0.00 0.00 2.57
176 177 7.568349 TCTGGTTCTTAGTAGCATGATGATTT 58.432 34.615 0.00 0.00 0.00 2.17
177 178 8.049117 TCTGGTTCTTAGTAGCATGATGATTTT 58.951 33.333 0.00 0.00 0.00 1.82
178 179 7.988737 TGGTTCTTAGTAGCATGATGATTTTG 58.011 34.615 0.00 0.00 0.00 2.44
179 180 7.611467 TGGTTCTTAGTAGCATGATGATTTTGT 59.389 33.333 0.00 0.00 0.00 2.83
180 181 8.462016 GGTTCTTAGTAGCATGATGATTTTGTT 58.538 33.333 0.00 0.00 0.00 2.83
181 182 9.495754 GTTCTTAGTAGCATGATGATTTTGTTC 57.504 33.333 0.00 0.00 0.00 3.18
182 183 8.791327 TCTTAGTAGCATGATGATTTTGTTCA 57.209 30.769 0.00 0.00 0.00 3.18
183 184 9.399797 TCTTAGTAGCATGATGATTTTGTTCAT 57.600 29.630 0.00 0.00 39.04 2.57
195 196 9.869844 GATGATTTTGTTCATCTCGGTATTTAG 57.130 33.333 7.09 0.00 45.59 1.85
196 197 7.693952 TGATTTTGTTCATCTCGGTATTTAGC 58.306 34.615 0.00 0.00 0.00 3.09
197 198 7.552687 TGATTTTGTTCATCTCGGTATTTAGCT 59.447 33.333 0.00 0.00 0.00 3.32
198 199 7.681939 TTTTGTTCATCTCGGTATTTAGCTT 57.318 32.000 0.00 0.00 0.00 3.74
199 200 7.681939 TTTGTTCATCTCGGTATTTAGCTTT 57.318 32.000 0.00 0.00 0.00 3.51
200 201 7.681939 TTGTTCATCTCGGTATTTAGCTTTT 57.318 32.000 0.00 0.00 0.00 2.27
201 202 7.072177 TGTTCATCTCGGTATTTAGCTTTTG 57.928 36.000 0.00 0.00 0.00 2.44
202 203 6.653320 TGTTCATCTCGGTATTTAGCTTTTGT 59.347 34.615 0.00 0.00 0.00 2.83
203 204 7.174253 TGTTCATCTCGGTATTTAGCTTTTGTT 59.826 33.333 0.00 0.00 0.00 2.83
204 205 7.681939 TCATCTCGGTATTTAGCTTTTGTTT 57.318 32.000 0.00 0.00 0.00 2.83
205 206 7.748847 TCATCTCGGTATTTAGCTTTTGTTTC 58.251 34.615 0.00 0.00 0.00 2.78
206 207 7.606456 TCATCTCGGTATTTAGCTTTTGTTTCT 59.394 33.333 0.00 0.00 0.00 2.52
207 208 8.879759 CATCTCGGTATTTAGCTTTTGTTTCTA 58.120 33.333 0.00 0.00 0.00 2.10
208 209 8.248117 TCTCGGTATTTAGCTTTTGTTTCTAC 57.752 34.615 0.00 0.00 0.00 2.59
209 210 7.332678 TCTCGGTATTTAGCTTTTGTTTCTACC 59.667 37.037 0.00 0.00 0.00 3.18
210 211 6.091169 TCGGTATTTAGCTTTTGTTTCTACCG 59.909 38.462 10.23 10.23 46.33 4.02
211 212 6.025896 GGTATTTAGCTTTTGTTTCTACCGC 58.974 40.000 0.00 0.00 0.00 5.68
212 213 5.699097 ATTTAGCTTTTGTTTCTACCGCA 57.301 34.783 0.00 0.00 0.00 5.69
213 214 4.477302 TTAGCTTTTGTTTCTACCGCAC 57.523 40.909 0.00 0.00 0.00 5.34
214 215 2.572290 AGCTTTTGTTTCTACCGCACT 58.428 42.857 0.00 0.00 0.00 4.40
215 216 2.290641 AGCTTTTGTTTCTACCGCACTG 59.709 45.455 0.00 0.00 0.00 3.66
216 217 2.289547 GCTTTTGTTTCTACCGCACTGA 59.710 45.455 0.00 0.00 0.00 3.41
217 218 3.242936 GCTTTTGTTTCTACCGCACTGAA 60.243 43.478 0.00 0.00 0.00 3.02
218 219 4.556699 GCTTTTGTTTCTACCGCACTGAAT 60.557 41.667 0.00 0.00 0.00 2.57
219 220 4.742438 TTTGTTTCTACCGCACTGAATC 57.258 40.909 0.00 0.00 0.00 2.52
220 221 3.394674 TGTTTCTACCGCACTGAATCA 57.605 42.857 0.00 0.00 0.00 2.57
221 222 3.734463 TGTTTCTACCGCACTGAATCAA 58.266 40.909 0.00 0.00 0.00 2.57
222 223 4.323417 TGTTTCTACCGCACTGAATCAAT 58.677 39.130 0.00 0.00 0.00 2.57
223 224 4.154015 TGTTTCTACCGCACTGAATCAATG 59.846 41.667 0.00 0.00 0.00 2.82
224 225 2.905075 TCTACCGCACTGAATCAATGG 58.095 47.619 0.00 0.00 0.00 3.16
225 226 2.499693 TCTACCGCACTGAATCAATGGA 59.500 45.455 0.00 0.00 0.00 3.41
226 227 2.198827 ACCGCACTGAATCAATGGAA 57.801 45.000 0.00 0.00 0.00 3.53
227 228 2.513753 ACCGCACTGAATCAATGGAAA 58.486 42.857 0.00 0.00 0.00 3.13
228 229 2.489329 ACCGCACTGAATCAATGGAAAG 59.511 45.455 0.00 0.00 0.00 2.62
229 230 2.159338 CCGCACTGAATCAATGGAAAGG 60.159 50.000 0.00 0.00 0.00 3.11
230 231 2.159338 CGCACTGAATCAATGGAAAGGG 60.159 50.000 0.00 0.00 0.00 3.95
231 232 3.091545 GCACTGAATCAATGGAAAGGGA 58.908 45.455 0.00 0.00 0.00 4.20
232 233 3.703052 GCACTGAATCAATGGAAAGGGAT 59.297 43.478 0.00 0.00 0.00 3.85
233 234 4.202090 GCACTGAATCAATGGAAAGGGATC 60.202 45.833 0.00 0.00 0.00 3.36
234 235 4.036027 CACTGAATCAATGGAAAGGGATCG 59.964 45.833 0.00 0.00 0.00 3.69
235 236 4.202441 CTGAATCAATGGAAAGGGATCGT 58.798 43.478 0.00 0.00 0.00 3.73
236 237 3.947196 TGAATCAATGGAAAGGGATCGTG 59.053 43.478 0.00 0.00 0.00 4.35
237 238 1.750193 TCAATGGAAAGGGATCGTGC 58.250 50.000 0.00 0.00 0.00 5.34
238 239 0.378257 CAATGGAAAGGGATCGTGCG 59.622 55.000 0.00 0.00 0.00 5.34
239 240 0.748005 AATGGAAAGGGATCGTGCGG 60.748 55.000 0.00 0.00 0.00 5.69
240 241 2.513897 GGAAAGGGATCGTGCGGG 60.514 66.667 0.00 0.00 0.00 6.13
241 242 2.513897 GAAAGGGATCGTGCGGGG 60.514 66.667 0.00 0.00 0.00 5.73
242 243 3.006728 AAAGGGATCGTGCGGGGA 61.007 61.111 0.00 0.00 0.00 4.81
243 244 2.925162 GAAAGGGATCGTGCGGGGAG 62.925 65.000 0.00 0.00 0.00 4.30
277 278 4.344865 GGGCCACGGCAGAAGGAA 62.345 66.667 10.83 0.00 44.11 3.36
278 279 2.282180 GGCCACGGCAGAAGGAAA 60.282 61.111 10.83 0.00 44.11 3.13
279 280 1.678970 GGCCACGGCAGAAGGAAAT 60.679 57.895 10.83 0.00 44.11 2.17
280 281 0.393808 GGCCACGGCAGAAGGAAATA 60.394 55.000 10.83 0.00 44.11 1.40
281 282 0.733150 GCCACGGCAGAAGGAAATAC 59.267 55.000 2.36 0.00 41.49 1.89
282 283 1.006832 CCACGGCAGAAGGAAATACG 58.993 55.000 0.00 0.00 0.00 3.06
283 284 1.006832 CACGGCAGAAGGAAATACGG 58.993 55.000 0.00 0.00 0.00 4.02
284 285 0.107848 ACGGCAGAAGGAAATACGGG 60.108 55.000 0.00 0.00 0.00 5.28
285 286 0.177141 CGGCAGAAGGAAATACGGGA 59.823 55.000 0.00 0.00 0.00 5.14
286 287 1.806623 CGGCAGAAGGAAATACGGGAG 60.807 57.143 0.00 0.00 0.00 4.30
288 289 2.355818 GGCAGAAGGAAATACGGGAGTT 60.356 50.000 0.00 0.00 43.33 3.01
289 290 3.344515 GCAGAAGGAAATACGGGAGTTT 58.655 45.455 0.00 0.00 43.33 2.66
290 291 3.127030 GCAGAAGGAAATACGGGAGTTTG 59.873 47.826 0.00 0.00 43.33 2.93
291 292 4.324267 CAGAAGGAAATACGGGAGTTTGT 58.676 43.478 0.00 0.00 43.33 2.83
292 293 4.760204 CAGAAGGAAATACGGGAGTTTGTT 59.240 41.667 0.00 0.00 43.33 2.83
293 294 5.240844 CAGAAGGAAATACGGGAGTTTGTTT 59.759 40.000 0.00 0.00 43.33 2.83
294 295 5.240844 AGAAGGAAATACGGGAGTTTGTTTG 59.759 40.000 0.00 0.00 43.33 2.93
295 296 3.254903 AGGAAATACGGGAGTTTGTTTGC 59.745 43.478 0.00 0.00 43.33 3.68
296 297 3.254903 GGAAATACGGGAGTTTGTTTGCT 59.745 43.478 0.00 0.00 43.33 3.91
297 298 4.261867 GGAAATACGGGAGTTTGTTTGCTT 60.262 41.667 0.00 0.00 43.33 3.91
298 299 4.929819 AATACGGGAGTTTGTTTGCTTT 57.070 36.364 0.00 0.00 43.33 3.51
299 300 6.394025 AAATACGGGAGTTTGTTTGCTTTA 57.606 33.333 0.00 0.00 43.33 1.85
300 301 3.982576 ACGGGAGTTTGTTTGCTTTAG 57.017 42.857 0.00 0.00 43.33 1.85
301 302 3.284617 ACGGGAGTTTGTTTGCTTTAGT 58.715 40.909 0.00 0.00 43.33 2.24
302 303 3.697542 ACGGGAGTTTGTTTGCTTTAGTT 59.302 39.130 0.00 0.00 43.33 2.24
303 304 4.158949 ACGGGAGTTTGTTTGCTTTAGTTT 59.841 37.500 0.00 0.00 43.33 2.66
304 305 5.106442 CGGGAGTTTGTTTGCTTTAGTTTT 58.894 37.500 0.00 0.00 0.00 2.43
305 306 5.005299 CGGGAGTTTGTTTGCTTTAGTTTTG 59.995 40.000 0.00 0.00 0.00 2.44
306 307 6.103330 GGGAGTTTGTTTGCTTTAGTTTTGA 58.897 36.000 0.00 0.00 0.00 2.69
307 308 6.035650 GGGAGTTTGTTTGCTTTAGTTTTGAC 59.964 38.462 0.00 0.00 0.00 3.18
308 309 6.811665 GGAGTTTGTTTGCTTTAGTTTTGACT 59.188 34.615 0.00 0.00 0.00 3.41
309 310 7.201435 GGAGTTTGTTTGCTTTAGTTTTGACTG 60.201 37.037 0.00 0.00 0.00 3.51
310 311 6.589907 AGTTTGTTTGCTTTAGTTTTGACTGG 59.410 34.615 0.00 0.00 0.00 4.00
311 312 5.906113 TGTTTGCTTTAGTTTTGACTGGA 57.094 34.783 0.00 0.00 0.00 3.86
312 313 6.274157 TGTTTGCTTTAGTTTTGACTGGAA 57.726 33.333 0.00 0.00 0.00 3.53
313 314 6.692486 TGTTTGCTTTAGTTTTGACTGGAAA 58.308 32.000 0.00 0.00 0.00 3.13
314 315 7.155328 TGTTTGCTTTAGTTTTGACTGGAAAA 58.845 30.769 0.00 0.00 0.00 2.29
315 316 7.330700 TGTTTGCTTTAGTTTTGACTGGAAAAG 59.669 33.333 0.00 0.00 0.00 2.27
316 317 5.901552 TGCTTTAGTTTTGACTGGAAAAGG 58.098 37.500 0.00 0.00 0.00 3.11
317 318 5.654650 TGCTTTAGTTTTGACTGGAAAAGGA 59.345 36.000 0.00 0.00 0.00 3.36
318 319 6.323739 TGCTTTAGTTTTGACTGGAAAAGGAT 59.676 34.615 0.00 0.00 0.00 3.24
319 320 6.863645 GCTTTAGTTTTGACTGGAAAAGGATC 59.136 38.462 0.00 0.00 0.00 3.36
320 321 6.554334 TTAGTTTTGACTGGAAAAGGATCG 57.446 37.500 0.00 0.00 0.00 3.69
321 322 4.714632 AGTTTTGACTGGAAAAGGATCGA 58.285 39.130 0.00 0.00 0.00 3.59
322 323 4.757149 AGTTTTGACTGGAAAAGGATCGAG 59.243 41.667 0.00 0.00 0.00 4.04
323 324 4.617253 TTTGACTGGAAAAGGATCGAGA 57.383 40.909 0.00 0.00 0.00 4.04
324 325 3.876274 TGACTGGAAAAGGATCGAGAG 57.124 47.619 0.00 0.00 0.00 3.20
325 326 2.497675 TGACTGGAAAAGGATCGAGAGG 59.502 50.000 0.00 0.00 0.00 3.69
326 327 1.834263 ACTGGAAAAGGATCGAGAGGG 59.166 52.381 0.00 0.00 0.00 4.30
327 328 2.111384 CTGGAAAAGGATCGAGAGGGA 58.889 52.381 0.00 0.00 0.00 4.20
328 329 2.102252 CTGGAAAAGGATCGAGAGGGAG 59.898 54.545 0.00 0.00 0.00 4.30
329 330 1.414550 GGAAAAGGATCGAGAGGGAGG 59.585 57.143 0.00 0.00 0.00 4.30
330 331 1.414550 GAAAAGGATCGAGAGGGAGGG 59.585 57.143 0.00 0.00 0.00 4.30
331 332 0.637195 AAAGGATCGAGAGGGAGGGA 59.363 55.000 0.00 0.00 0.00 4.20
332 333 0.637195 AAGGATCGAGAGGGAGGGAA 59.363 55.000 0.00 0.00 0.00 3.97
333 334 0.637195 AGGATCGAGAGGGAGGGAAA 59.363 55.000 0.00 0.00 0.00 3.13
334 335 1.008449 AGGATCGAGAGGGAGGGAAAA 59.992 52.381 0.00 0.00 0.00 2.29
335 336 2.050918 GGATCGAGAGGGAGGGAAAAT 58.949 52.381 0.00 0.00 0.00 1.82
336 337 2.224402 GGATCGAGAGGGAGGGAAAATG 60.224 54.545 0.00 0.00 0.00 2.32
337 338 1.952621 TCGAGAGGGAGGGAAAATGT 58.047 50.000 0.00 0.00 0.00 2.71
338 339 2.266279 TCGAGAGGGAGGGAAAATGTT 58.734 47.619 0.00 0.00 0.00 2.71
339 340 2.027192 TCGAGAGGGAGGGAAAATGTTG 60.027 50.000 0.00 0.00 0.00 3.33
340 341 2.290323 CGAGAGGGAGGGAAAATGTTGT 60.290 50.000 0.00 0.00 0.00 3.32
341 342 3.055385 CGAGAGGGAGGGAAAATGTTGTA 60.055 47.826 0.00 0.00 0.00 2.41
342 343 4.564821 CGAGAGGGAGGGAAAATGTTGTAA 60.565 45.833 0.00 0.00 0.00 2.41
343 344 4.663334 AGAGGGAGGGAAAATGTTGTAAC 58.337 43.478 0.00 0.00 0.00 2.50
344 345 3.762288 GAGGGAGGGAAAATGTTGTAACC 59.238 47.826 0.00 0.00 0.00 2.85
345 346 2.490509 GGGAGGGAAAATGTTGTAACCG 59.509 50.000 0.00 0.00 0.00 4.44
346 347 3.151554 GGAGGGAAAATGTTGTAACCGT 58.848 45.455 0.00 0.00 0.00 4.83
347 348 3.189910 GGAGGGAAAATGTTGTAACCGTC 59.810 47.826 0.00 0.00 0.00 4.79
348 349 3.816523 GAGGGAAAATGTTGTAACCGTCA 59.183 43.478 0.00 0.00 34.07 4.35
349 350 3.818773 AGGGAAAATGTTGTAACCGTCAG 59.181 43.478 0.00 0.00 0.00 3.51
350 351 3.816523 GGGAAAATGTTGTAACCGTCAGA 59.183 43.478 0.00 0.00 0.00 3.27
351 352 4.457949 GGGAAAATGTTGTAACCGTCAGAT 59.542 41.667 0.00 0.00 0.00 2.90
352 353 5.390613 GGAAAATGTTGTAACCGTCAGATG 58.609 41.667 0.00 0.00 0.00 2.90
353 354 5.180492 GGAAAATGTTGTAACCGTCAGATGA 59.820 40.000 0.00 0.00 0.00 2.92
354 355 6.293735 GGAAAATGTTGTAACCGTCAGATGAA 60.294 38.462 0.00 0.00 0.00 2.57
355 356 5.862924 AATGTTGTAACCGTCAGATGAAG 57.137 39.130 0.00 0.00 0.00 3.02
356 357 4.594123 TGTTGTAACCGTCAGATGAAGA 57.406 40.909 0.00 0.00 0.00 2.87
357 358 4.951254 TGTTGTAACCGTCAGATGAAGAA 58.049 39.130 0.00 0.00 0.00 2.52
358 359 5.547465 TGTTGTAACCGTCAGATGAAGAAT 58.453 37.500 0.00 0.00 0.00 2.40
359 360 5.408299 TGTTGTAACCGTCAGATGAAGAATG 59.592 40.000 0.00 0.00 0.00 2.67
360 361 4.503910 TGTAACCGTCAGATGAAGAATGG 58.496 43.478 0.00 0.00 0.00 3.16
361 362 3.981071 AACCGTCAGATGAAGAATGGA 57.019 42.857 0.00 0.00 0.00 3.41
362 363 4.494091 AACCGTCAGATGAAGAATGGAT 57.506 40.909 0.00 0.00 0.00 3.41
363 364 3.801698 ACCGTCAGATGAAGAATGGATG 58.198 45.455 0.00 0.00 0.00 3.51
364 365 3.136763 CCGTCAGATGAAGAATGGATGG 58.863 50.000 0.00 0.00 0.00 3.51
365 366 3.432749 CCGTCAGATGAAGAATGGATGGT 60.433 47.826 0.00 0.00 0.00 3.55
366 367 3.558829 CGTCAGATGAAGAATGGATGGTG 59.441 47.826 0.00 0.00 0.00 4.17
367 368 3.314635 GTCAGATGAAGAATGGATGGTGC 59.685 47.826 0.00 0.00 0.00 5.01
368 369 2.289820 CAGATGAAGAATGGATGGTGCG 59.710 50.000 0.00 0.00 0.00 5.34
369 370 1.605710 GATGAAGAATGGATGGTGCGG 59.394 52.381 0.00 0.00 0.00 5.69
370 371 0.394216 TGAAGAATGGATGGTGCGGG 60.394 55.000 0.00 0.00 0.00 6.13
371 372 0.107214 GAAGAATGGATGGTGCGGGA 60.107 55.000 0.00 0.00 0.00 5.14
372 373 0.107017 AAGAATGGATGGTGCGGGAG 60.107 55.000 0.00 0.00 0.00 4.30
373 374 1.224592 GAATGGATGGTGCGGGAGT 59.775 57.895 0.00 0.00 0.00 3.85
374 375 0.468226 GAATGGATGGTGCGGGAGTA 59.532 55.000 0.00 0.00 0.00 2.59
375 376 1.072331 GAATGGATGGTGCGGGAGTAT 59.928 52.381 0.00 0.00 0.00 2.12
376 377 0.397941 ATGGATGGTGCGGGAGTATG 59.602 55.000 0.00 0.00 0.00 2.39
377 378 1.071471 GGATGGTGCGGGAGTATGG 59.929 63.158 0.00 0.00 0.00 2.74
378 379 1.407656 GGATGGTGCGGGAGTATGGA 61.408 60.000 0.00 0.00 0.00 3.41
379 380 0.687354 GATGGTGCGGGAGTATGGAT 59.313 55.000 0.00 0.00 0.00 3.41
380 381 0.397941 ATGGTGCGGGAGTATGGATG 59.602 55.000 0.00 0.00 0.00 3.51
381 382 1.071471 GGTGCGGGAGTATGGATGG 59.929 63.158 0.00 0.00 0.00 3.51
382 383 1.071471 GTGCGGGAGTATGGATGGG 59.929 63.158 0.00 0.00 0.00 4.00
383 384 1.074850 TGCGGGAGTATGGATGGGA 60.075 57.895 0.00 0.00 0.00 4.37
384 385 1.121407 TGCGGGAGTATGGATGGGAG 61.121 60.000 0.00 0.00 0.00 4.30
385 386 1.674057 CGGGAGTATGGATGGGAGC 59.326 63.158 0.00 0.00 0.00 4.70
386 387 1.121407 CGGGAGTATGGATGGGAGCA 61.121 60.000 0.00 0.00 0.00 4.26
387 388 0.398318 GGGAGTATGGATGGGAGCAC 59.602 60.000 0.00 0.00 0.00 4.40
388 389 1.131638 GGAGTATGGATGGGAGCACA 58.868 55.000 0.00 0.00 0.00 4.57
389 390 1.071385 GGAGTATGGATGGGAGCACAG 59.929 57.143 0.00 0.00 0.00 3.66
390 391 1.071385 GAGTATGGATGGGAGCACAGG 59.929 57.143 0.00 0.00 0.00 4.00
391 392 1.131638 GTATGGATGGGAGCACAGGA 58.868 55.000 0.00 0.00 0.00 3.86
392 393 1.071385 GTATGGATGGGAGCACAGGAG 59.929 57.143 0.00 0.00 0.00 3.69
393 394 1.351080 ATGGATGGGAGCACAGGAGG 61.351 60.000 0.00 0.00 0.00 4.30
394 395 2.750657 GGATGGGAGCACAGGAGGG 61.751 68.421 0.00 0.00 0.00 4.30
395 396 1.690633 GATGGGAGCACAGGAGGGA 60.691 63.158 0.00 0.00 0.00 4.20
396 397 1.692042 ATGGGAGCACAGGAGGGAG 60.692 63.158 0.00 0.00 0.00 4.30
397 398 2.039624 GGGAGCACAGGAGGGAGA 59.960 66.667 0.00 0.00 0.00 3.71
398 399 2.063378 GGGAGCACAGGAGGGAGAG 61.063 68.421 0.00 0.00 0.00 3.20
399 400 2.063378 GGAGCACAGGAGGGAGAGG 61.063 68.421 0.00 0.00 0.00 3.69
400 401 1.000993 GAGCACAGGAGGGAGAGGA 59.999 63.158 0.00 0.00 0.00 3.71
401 402 1.001503 AGCACAGGAGGGAGAGGAG 59.998 63.158 0.00 0.00 0.00 3.69
402 403 2.063378 GCACAGGAGGGAGAGGAGG 61.063 68.421 0.00 0.00 0.00 4.30
403 404 2.063378 CACAGGAGGGAGAGGAGGC 61.063 68.421 0.00 0.00 0.00 4.70
404 405 2.366167 CAGGAGGGAGAGGAGGCA 59.634 66.667 0.00 0.00 0.00 4.75
405 406 1.306482 CAGGAGGGAGAGGAGGCAA 60.306 63.158 0.00 0.00 0.00 4.52
406 407 1.002792 AGGAGGGAGAGGAGGCAAG 59.997 63.158 0.00 0.00 0.00 4.01
407 408 2.741055 GGAGGGAGAGGAGGCAAGC 61.741 68.421 0.00 0.00 0.00 4.01
408 409 2.690510 AGGGAGAGGAGGCAAGCC 60.691 66.667 2.02 2.02 0.00 4.35
417 418 3.011517 AGGCAAGCCTCGTCCCAT 61.012 61.111 8.02 0.00 44.43 4.00
418 419 2.825836 GGCAAGCCTCGTCCCATG 60.826 66.667 3.29 0.00 0.00 3.66
419 420 2.268920 GCAAGCCTCGTCCCATGA 59.731 61.111 0.00 0.00 0.00 3.07
420 421 2.109126 GCAAGCCTCGTCCCATGAC 61.109 63.158 0.00 0.00 38.18 3.06
421 422 1.450312 CAAGCCTCGTCCCATGACC 60.450 63.158 0.00 0.00 38.32 4.02
422 423 1.918293 AAGCCTCGTCCCATGACCA 60.918 57.895 0.00 0.00 38.32 4.02
423 424 1.903877 AAGCCTCGTCCCATGACCAG 61.904 60.000 0.00 0.00 38.32 4.00
424 425 2.903357 CCTCGTCCCATGACCAGG 59.097 66.667 0.00 0.00 42.40 4.45
425 426 2.735772 CCTCGTCCCATGACCAGGG 61.736 68.421 0.00 0.00 43.81 4.45
426 427 1.990060 CTCGTCCCATGACCAGGGT 60.990 63.158 0.00 0.00 46.82 4.34
427 428 1.537889 TCGTCCCATGACCAGGGTT 60.538 57.895 0.00 0.00 46.82 4.11
428 429 0.252330 TCGTCCCATGACCAGGGTTA 60.252 55.000 0.00 0.00 46.82 2.85
429 430 0.616371 CGTCCCATGACCAGGGTTAA 59.384 55.000 0.00 0.00 46.82 2.01
430 431 1.003812 CGTCCCATGACCAGGGTTAAA 59.996 52.381 0.00 0.00 46.82 1.52
431 432 2.723273 GTCCCATGACCAGGGTTAAAG 58.277 52.381 0.00 0.00 46.82 1.85
432 433 1.638589 TCCCATGACCAGGGTTAAAGG 59.361 52.381 0.00 0.00 46.82 3.11
433 434 1.357761 CCCATGACCAGGGTTAAAGGT 59.642 52.381 0.00 0.00 41.61 3.50
438 439 1.073098 ACCAGGGTTAAAGGTCAGGG 58.927 55.000 0.00 0.00 0.00 4.45
439 440 1.073098 CCAGGGTTAAAGGTCAGGGT 58.927 55.000 0.00 0.00 0.00 4.34
440 441 1.271926 CCAGGGTTAAAGGTCAGGGTG 60.272 57.143 0.00 0.00 0.00 4.61
441 442 1.073098 AGGGTTAAAGGTCAGGGTGG 58.927 55.000 0.00 0.00 0.00 4.61
442 443 0.611062 GGGTTAAAGGTCAGGGTGGC 60.611 60.000 0.00 0.00 0.00 5.01
443 444 0.111639 GGTTAAAGGTCAGGGTGGCA 59.888 55.000 0.00 0.00 0.00 4.92
444 445 1.272480 GGTTAAAGGTCAGGGTGGCAT 60.272 52.381 0.00 0.00 0.00 4.40
445 446 2.025699 GGTTAAAGGTCAGGGTGGCATA 60.026 50.000 0.00 0.00 0.00 3.14
446 447 3.279434 GTTAAAGGTCAGGGTGGCATAG 58.721 50.000 0.00 0.00 0.00 2.23
447 448 1.372501 AAAGGTCAGGGTGGCATAGT 58.627 50.000 0.00 0.00 0.00 2.12
448 449 0.620556 AAGGTCAGGGTGGCATAGTG 59.379 55.000 0.00 0.00 0.00 2.74
449 450 1.224592 GGTCAGGGTGGCATAGTGG 59.775 63.158 0.00 0.00 0.00 4.00
450 451 1.224592 GTCAGGGTGGCATAGTGGG 59.775 63.158 0.00 0.00 0.00 4.61
451 452 2.124151 CAGGGTGGCATAGTGGGC 60.124 66.667 0.00 0.00 0.00 5.36
457 458 2.203070 GGCATAGTGGGCCGACTG 60.203 66.667 28.82 15.87 42.39 3.51
458 459 2.731571 GGCATAGTGGGCCGACTGA 61.732 63.158 28.82 13.91 42.39 3.41
459 460 1.220749 GCATAGTGGGCCGACTGAA 59.779 57.895 28.82 11.75 0.00 3.02
460 461 0.392461 GCATAGTGGGCCGACTGAAA 60.392 55.000 28.82 10.98 0.00 2.69
461 462 1.369625 CATAGTGGGCCGACTGAAAC 58.630 55.000 28.82 3.26 0.00 2.78
462 463 0.252197 ATAGTGGGCCGACTGAAACC 59.748 55.000 28.82 0.00 0.00 3.27
463 464 1.122632 TAGTGGGCCGACTGAAACCA 61.123 55.000 28.82 6.17 0.00 3.67
464 465 1.966451 GTGGGCCGACTGAAACCAG 60.966 63.158 11.17 0.00 37.67 4.00
465 466 2.430367 GGGCCGACTGAAACCAGT 59.570 61.111 0.00 0.00 46.76 4.00
474 475 3.775661 ACTGAAACCAGTCAAAAACGG 57.224 42.857 0.00 0.00 40.68 4.44
475 476 3.086282 ACTGAAACCAGTCAAAAACGGT 58.914 40.909 0.00 0.00 40.68 4.83
476 477 3.508402 ACTGAAACCAGTCAAAAACGGTT 59.492 39.130 0.00 0.00 40.68 4.44
478 479 5.183522 ACTGAAACCAGTCAAAAACGGTTTA 59.816 36.000 6.53 0.00 45.84 2.01
479 480 5.642686 TGAAACCAGTCAAAAACGGTTTAG 58.357 37.500 6.53 3.29 45.84 1.85
480 481 4.642445 AACCAGTCAAAAACGGTTTAGG 57.358 40.909 6.53 2.55 39.88 2.69
481 482 2.953648 ACCAGTCAAAAACGGTTTAGGG 59.046 45.455 6.53 0.00 32.99 3.53
482 483 2.953648 CCAGTCAAAAACGGTTTAGGGT 59.046 45.455 6.53 0.00 0.00 4.34
483 484 3.382227 CCAGTCAAAAACGGTTTAGGGTT 59.618 43.478 6.53 0.00 0.00 4.11
484 485 4.579753 CCAGTCAAAAACGGTTTAGGGTTA 59.420 41.667 6.53 0.00 0.00 2.85
485 486 5.067544 CCAGTCAAAAACGGTTTAGGGTTAA 59.932 40.000 6.53 0.00 0.00 2.01
486 487 6.239092 CCAGTCAAAAACGGTTTAGGGTTAAT 60.239 38.462 6.53 0.00 0.00 1.40
487 488 7.204604 CAGTCAAAAACGGTTTAGGGTTAATT 58.795 34.615 6.53 0.00 0.00 1.40
488 489 7.380333 CAGTCAAAAACGGTTTAGGGTTAATTC 59.620 37.037 6.53 0.00 0.00 2.17
489 490 7.286087 AGTCAAAAACGGTTTAGGGTTAATTCT 59.714 33.333 6.53 0.00 0.00 2.40
490 491 7.922278 GTCAAAAACGGTTTAGGGTTAATTCTT 59.078 33.333 6.53 0.00 0.00 2.52
491 492 7.921745 TCAAAAACGGTTTAGGGTTAATTCTTG 59.078 33.333 6.53 3.64 0.00 3.02
492 493 6.964807 AAACGGTTTAGGGTTAATTCTTGT 57.035 33.333 3.90 0.00 0.00 3.16
493 494 6.564709 AACGGTTTAGGGTTAATTCTTGTC 57.435 37.500 0.00 0.00 0.00 3.18
494 495 5.623169 ACGGTTTAGGGTTAATTCTTGTCA 58.377 37.500 0.00 0.00 0.00 3.58
495 496 6.063404 ACGGTTTAGGGTTAATTCTTGTCAA 58.937 36.000 0.00 0.00 0.00 3.18
513 514 9.434420 TCTTGTCAATTTTTGAAAGTTTGATGT 57.566 25.926 0.00 0.00 42.15 3.06
544 545 4.600062 AGAAGACTTTGGAGTTTGGTGTT 58.400 39.130 0.00 0.00 35.88 3.32
548 549 5.445964 AGACTTTGGAGTTTGGTGTTGTAT 58.554 37.500 0.00 0.00 35.88 2.29
553 554 7.724061 ACTTTGGAGTTTGGTGTTGTATCTTAT 59.276 33.333 0.00 0.00 29.87 1.73
621 629 4.092816 GTGTTTGAGGTGTTTTGTACGTG 58.907 43.478 0.00 0.00 0.00 4.49
628 636 2.937799 GGTGTTTTGTACGTGGTTCTGA 59.062 45.455 0.00 0.00 0.00 3.27
629 637 3.562557 GGTGTTTTGTACGTGGTTCTGAT 59.437 43.478 0.00 0.00 0.00 2.90
633 641 5.529430 TGTTTTGTACGTGGTTCTGATGAAT 59.471 36.000 0.00 0.00 34.40 2.57
637 645 6.627395 TGTACGTGGTTCTGATGAATTTTT 57.373 33.333 0.00 0.00 34.40 1.94
745 756 0.108520 GCTTTCGGTACATCGGTGGA 60.109 55.000 0.00 0.00 0.00 4.02
792 803 3.628487 CCAAAGAAACACGTTAAGACCCA 59.372 43.478 0.00 0.00 0.00 4.51
810 821 1.242076 CAAACCCTTGTGCTCTCCAG 58.758 55.000 0.00 0.00 0.00 3.86
831 845 1.181001 CGCGTAGTTCATCGTCAGTC 58.819 55.000 0.00 0.00 0.00 3.51
866 880 3.914426 ATAATCAGGTGCGTTCCTCTT 57.086 42.857 0.00 0.00 35.37 2.85
872 886 1.073923 AGGTGCGTTCCTCTTTCCAAT 59.926 47.619 0.00 0.00 31.32 3.16
879 893 4.917998 GCGTTCCTCTTTCCAATCTTTTTC 59.082 41.667 0.00 0.00 0.00 2.29
880 894 5.461526 CGTTCCTCTTTCCAATCTTTTTCC 58.538 41.667 0.00 0.00 0.00 3.13
950 983 3.621558 CCCTTTAAATCCACCCTGACTC 58.378 50.000 0.00 0.00 0.00 3.36
956 989 0.333312 ATCCACCCTGACTCGTCTCT 59.667 55.000 0.00 0.00 0.00 3.10
975 1008 0.384309 TTATCCGTCGCAGGTAGCAG 59.616 55.000 0.00 0.00 46.13 4.24
976 1009 2.071844 TATCCGTCGCAGGTAGCAGC 62.072 60.000 0.00 0.00 46.13 5.25
977 1010 4.435436 CCGTCGCAGGTAGCAGCA 62.435 66.667 10.05 0.00 46.13 4.41
978 1011 3.181967 CGTCGCAGGTAGCAGCAC 61.182 66.667 10.05 6.07 46.13 4.40
979 1012 3.181967 GTCGCAGGTAGCAGCACG 61.182 66.667 10.05 0.26 46.13 5.34
980 1013 4.435436 TCGCAGGTAGCAGCACGG 62.435 66.667 10.05 0.00 46.13 4.94
981 1014 4.435436 CGCAGGTAGCAGCACGGA 62.435 66.667 10.05 0.00 46.13 4.69
982 1015 2.187946 GCAGGTAGCAGCACGGAT 59.812 61.111 4.24 0.00 44.79 4.18
984 1017 1.227380 CAGGTAGCAGCACGGATCC 60.227 63.158 0.00 0.00 0.00 3.36
988 1021 3.430565 TAGCAGCACGGATCCGCAG 62.431 63.158 33.62 25.95 44.19 5.18
1011 1060 0.108186 CACCAGCGATGGCAGAGTTA 60.108 55.000 21.97 0.00 43.41 2.24
1287 1336 2.507992 CTCGCCGTCAAGCTCCTG 60.508 66.667 0.00 0.00 0.00 3.86
1508 1557 3.181454 CGTTAGATCTGGGGGCAAACTAT 60.181 47.826 5.18 0.00 0.00 2.12
1536 1585 3.502211 CGTTCCTGTATCTTGGCTGTTTT 59.498 43.478 0.00 0.00 0.00 2.43
1679 1728 9.693157 GTGCTTGTTGATCAAATTAATAATTGC 57.307 29.630 10.35 6.24 35.48 3.56
1708 1757 5.295431 TGTTGAGAAGTGAGTTTGTGTTG 57.705 39.130 0.00 0.00 0.00 3.33
1746 1795 0.887933 ACCATCAAATTGGGCGTGTC 59.112 50.000 0.00 0.00 41.35 3.67
1766 1847 2.229062 TCTCGACAGCTTGAGGTAAGTG 59.771 50.000 7.36 0.00 38.70 3.16
1772 1853 2.037772 CAGCTTGAGGTAAGTGGAGTGT 59.962 50.000 0.00 0.00 38.70 3.55
1833 1914 1.834263 GTAGGGGAACAGATGCTGAGT 59.166 52.381 0.82 0.00 35.18 3.41
1886 1969 0.911769 TGCGAAAGTGGATGATCCCT 59.088 50.000 9.36 2.79 35.03 4.20
1905 1988 2.494059 CTTTGGTACAGAGGTGGTGTG 58.506 52.381 0.00 0.00 42.39 3.82
1939 2022 8.019669 CAGATAGTTTCCTTGAATTTGTGTGAG 58.980 37.037 0.00 0.00 0.00 3.51
1964 2047 3.121279 CAGTGAATTGTCGTGACTAACCG 59.879 47.826 1.23 0.00 0.00 4.44
1977 2060 3.064271 TGACTAACCGCAAGTTGACAAAC 59.936 43.478 7.16 0.00 39.67 2.93
1978 2061 2.356695 ACTAACCGCAAGTTGACAAACC 59.643 45.455 7.16 0.00 39.67 3.27
1979 2062 1.178276 AACCGCAAGTTGACAAACCA 58.822 45.000 7.16 0.00 37.29 3.67
1980 2063 1.398692 ACCGCAAGTTGACAAACCAT 58.601 45.000 7.16 0.00 36.94 3.55
1981 2064 1.066908 ACCGCAAGTTGACAAACCATG 59.933 47.619 7.16 0.00 36.94 3.66
1989 2232 2.948979 GTTGACAAACCATGACTCCACA 59.051 45.455 0.00 0.00 0.00 4.17
2073 2318 6.491714 ACTGTATTTGAGGTATGAGAGCAT 57.508 37.500 0.00 0.00 38.54 3.79
2089 2334 3.194329 AGAGCATGAGTCGAAATCAGTCA 59.806 43.478 0.00 0.00 0.00 3.41
2112 2357 0.681887 CATTGGTGGCCTCATCAGCA 60.682 55.000 3.32 0.00 40.30 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.105128 GGCGTCTCCGATGAGTGG 59.895 66.667 0.00 0.00 39.75 4.00
20 21 4.609247 GACGGACGGATCGAGGCG 62.609 72.222 0.00 0.00 0.00 5.52
21 22 4.609247 CGACGGACGGATCGAGGC 62.609 72.222 0.00 0.00 40.86 4.70
22 23 4.609247 GCGACGGACGGATCGAGG 62.609 72.222 8.58 0.00 40.86 4.63
23 24 3.574445 AGCGACGGACGGATCGAG 61.574 66.667 8.58 0.00 40.86 4.04
24 25 3.872728 CAGCGACGGACGGATCGA 61.873 66.667 8.58 0.00 40.86 3.59
25 26 2.816360 TACAGCGACGGACGGATCG 61.816 63.158 1.66 0.00 42.83 3.69
26 27 1.298190 GTACAGCGACGGACGGATC 60.298 63.158 1.66 0.00 42.83 3.36
27 28 2.768492 GGTACAGCGACGGACGGAT 61.768 63.158 1.66 0.00 42.83 4.18
28 29 3.434319 GGTACAGCGACGGACGGA 61.434 66.667 1.66 0.00 42.83 4.69
29 30 2.862347 GAAGGTACAGCGACGGACGG 62.862 65.000 1.66 0.00 42.83 4.79
30 31 1.513586 GAAGGTACAGCGACGGACG 60.514 63.158 0.00 0.00 45.66 4.79
31 32 0.456312 CAGAAGGTACAGCGACGGAC 60.456 60.000 0.00 0.00 0.00 4.79
32 33 0.607217 TCAGAAGGTACAGCGACGGA 60.607 55.000 0.00 0.00 0.00 4.69
33 34 0.179161 CTCAGAAGGTACAGCGACGG 60.179 60.000 0.00 0.00 0.00 4.79
34 35 0.798771 GCTCAGAAGGTACAGCGACG 60.799 60.000 0.00 0.00 0.00 5.12
35 36 0.243907 TGCTCAGAAGGTACAGCGAC 59.756 55.000 0.00 0.00 34.39 5.19
36 37 0.966179 TTGCTCAGAAGGTACAGCGA 59.034 50.000 0.00 0.00 34.39 4.93
37 38 1.071605 GTTGCTCAGAAGGTACAGCG 58.928 55.000 0.00 0.00 34.39 5.18
38 39 2.464157 AGTTGCTCAGAAGGTACAGC 57.536 50.000 0.00 0.00 0.00 4.40
39 40 4.673061 CGACTAGTTGCTCAGAAGGTACAG 60.673 50.000 0.00 0.00 0.00 2.74
40 41 3.190744 CGACTAGTTGCTCAGAAGGTACA 59.809 47.826 0.00 0.00 0.00 2.90
41 42 3.439476 TCGACTAGTTGCTCAGAAGGTAC 59.561 47.826 5.12 0.00 0.00 3.34
42 43 3.439476 GTCGACTAGTTGCTCAGAAGGTA 59.561 47.826 8.70 0.00 0.00 3.08
43 44 2.229302 GTCGACTAGTTGCTCAGAAGGT 59.771 50.000 8.70 0.00 0.00 3.50
44 45 2.490115 AGTCGACTAGTTGCTCAGAAGG 59.510 50.000 18.46 0.00 0.00 3.46
45 46 3.497118 CAGTCGACTAGTTGCTCAGAAG 58.503 50.000 19.57 0.00 0.00 2.85
46 47 2.229062 CCAGTCGACTAGTTGCTCAGAA 59.771 50.000 19.57 0.00 0.00 3.02
47 48 1.813178 CCAGTCGACTAGTTGCTCAGA 59.187 52.381 19.57 0.00 0.00 3.27
48 49 1.542030 ACCAGTCGACTAGTTGCTCAG 59.458 52.381 19.57 2.02 0.00 3.35
49 50 1.269723 CACCAGTCGACTAGTTGCTCA 59.730 52.381 19.57 0.00 0.00 4.26
50 51 1.983972 CACCAGTCGACTAGTTGCTC 58.016 55.000 19.57 1.62 0.00 4.26
51 52 0.038159 GCACCAGTCGACTAGTTGCT 60.038 55.000 26.29 3.49 0.00 3.91
52 53 0.319555 TGCACCAGTCGACTAGTTGC 60.320 55.000 26.61 26.61 0.00 4.17
53 54 1.995484 CATGCACCAGTCGACTAGTTG 59.005 52.381 19.57 15.75 0.00 3.16
54 55 1.673033 GCATGCACCAGTCGACTAGTT 60.673 52.381 19.57 2.01 0.00 2.24
55 56 0.108615 GCATGCACCAGTCGACTAGT 60.109 55.000 19.57 15.10 0.00 2.57
56 57 0.108662 TGCATGCACCAGTCGACTAG 60.109 55.000 19.57 14.31 0.00 2.57
57 58 0.320050 TTGCATGCACCAGTCGACTA 59.680 50.000 22.58 1.92 0.00 2.59
58 59 1.071299 TTGCATGCACCAGTCGACT 59.929 52.632 22.58 13.58 0.00 4.18
59 60 1.207593 GTTGCATGCACCAGTCGAC 59.792 57.895 22.58 10.49 0.00 4.20
60 61 0.534877 AAGTTGCATGCACCAGTCGA 60.535 50.000 22.58 0.00 0.00 4.20
61 62 0.311790 AAAGTTGCATGCACCAGTCG 59.688 50.000 22.58 0.00 0.00 4.18
62 63 2.129607 CAAAAGTTGCATGCACCAGTC 58.870 47.619 22.58 8.74 0.00 3.51
63 64 1.481772 ACAAAAGTTGCATGCACCAGT 59.518 42.857 22.58 6.92 0.00 4.00
64 65 1.862201 CACAAAAGTTGCATGCACCAG 59.138 47.619 22.58 9.85 0.00 4.00
65 66 1.206610 ACACAAAAGTTGCATGCACCA 59.793 42.857 22.58 3.29 0.00 4.17
66 67 1.593933 CACACAAAAGTTGCATGCACC 59.406 47.619 22.58 14.82 0.00 5.01
67 68 2.270047 ACACACAAAAGTTGCATGCAC 58.730 42.857 22.58 15.59 0.00 4.57
68 69 2.669300 ACACACAAAAGTTGCATGCA 57.331 40.000 18.46 18.46 0.00 3.96
69 70 3.189285 AGAACACACAAAAGTTGCATGC 58.811 40.909 11.82 11.82 0.00 4.06
70 71 5.577945 AGAAAGAACACACAAAAGTTGCATG 59.422 36.000 0.00 0.00 0.00 4.06
71 72 5.723295 AGAAAGAACACACAAAAGTTGCAT 58.277 33.333 0.00 0.00 0.00 3.96
72 73 5.132897 AGAAAGAACACACAAAAGTTGCA 57.867 34.783 0.00 0.00 0.00 4.08
73 74 5.863935 AGAAGAAAGAACACACAAAAGTTGC 59.136 36.000 0.00 0.00 0.00 4.17
74 75 7.873739 AAGAAGAAAGAACACACAAAAGTTG 57.126 32.000 0.00 0.00 0.00 3.16
75 76 7.384932 CCAAAGAAGAAAGAACACACAAAAGTT 59.615 33.333 0.00 0.00 0.00 2.66
76 77 6.868339 CCAAAGAAGAAAGAACACACAAAAGT 59.132 34.615 0.00 0.00 0.00 2.66
77 78 6.868339 ACCAAAGAAGAAAGAACACACAAAAG 59.132 34.615 0.00 0.00 0.00 2.27
78 79 6.644592 CACCAAAGAAGAAAGAACACACAAAA 59.355 34.615 0.00 0.00 0.00 2.44
79 80 6.155827 CACCAAAGAAGAAAGAACACACAAA 58.844 36.000 0.00 0.00 0.00 2.83
80 81 5.336372 CCACCAAAGAAGAAAGAACACACAA 60.336 40.000 0.00 0.00 0.00 3.33
81 82 4.157656 CCACCAAAGAAGAAAGAACACACA 59.842 41.667 0.00 0.00 0.00 3.72
82 83 4.672409 CCACCAAAGAAGAAAGAACACAC 58.328 43.478 0.00 0.00 0.00 3.82
83 84 3.130340 GCCACCAAAGAAGAAAGAACACA 59.870 43.478 0.00 0.00 0.00 3.72
84 85 3.130340 TGCCACCAAAGAAGAAAGAACAC 59.870 43.478 0.00 0.00 0.00 3.32
85 86 3.360867 TGCCACCAAAGAAGAAAGAACA 58.639 40.909 0.00 0.00 0.00 3.18
86 87 4.301628 CATGCCACCAAAGAAGAAAGAAC 58.698 43.478 0.00 0.00 0.00 3.01
87 88 3.243839 GCATGCCACCAAAGAAGAAAGAA 60.244 43.478 6.36 0.00 0.00 2.52
88 89 2.297033 GCATGCCACCAAAGAAGAAAGA 59.703 45.455 6.36 0.00 0.00 2.52
89 90 2.680577 GCATGCCACCAAAGAAGAAAG 58.319 47.619 6.36 0.00 0.00 2.62
90 91 1.000385 CGCATGCCACCAAAGAAGAAA 60.000 47.619 13.15 0.00 0.00 2.52
91 92 0.597568 CGCATGCCACCAAAGAAGAA 59.402 50.000 13.15 0.00 0.00 2.52
92 93 1.243342 CCGCATGCCACCAAAGAAGA 61.243 55.000 13.15 0.00 0.00 2.87
93 94 1.213537 CCGCATGCCACCAAAGAAG 59.786 57.895 13.15 0.00 0.00 2.85
94 95 2.929903 GCCGCATGCCACCAAAGAA 61.930 57.895 13.15 0.00 0.00 2.52
95 96 3.372730 GCCGCATGCCACCAAAGA 61.373 61.111 13.15 0.00 0.00 2.52
96 97 3.223710 TTGCCGCATGCCACCAAAG 62.224 57.895 13.15 0.00 40.16 2.77
97 98 3.229501 TTGCCGCATGCCACCAAA 61.230 55.556 13.15 0.00 40.16 3.28
98 99 3.988525 GTTGCCGCATGCCACCAA 61.989 61.111 13.15 9.98 40.16 3.67
100 101 4.722855 GTGTTGCCGCATGCCACC 62.723 66.667 13.15 0.00 40.16 4.61
101 102 4.722855 GGTGTTGCCGCATGCCAC 62.723 66.667 13.15 13.46 40.16 5.01
110 111 0.939106 GAATGTGTTGCGGTGTTGCC 60.939 55.000 0.00 0.00 0.00 4.52
111 112 0.939106 GGAATGTGTTGCGGTGTTGC 60.939 55.000 0.00 0.00 0.00 4.17
112 113 0.667993 AGGAATGTGTTGCGGTGTTG 59.332 50.000 0.00 0.00 0.00 3.33
113 114 0.667993 CAGGAATGTGTTGCGGTGTT 59.332 50.000 0.00 0.00 0.00 3.32
114 115 0.465460 ACAGGAATGTGTTGCGGTGT 60.465 50.000 0.00 0.00 33.32 4.16
115 116 0.040157 CACAGGAATGTGTTGCGGTG 60.040 55.000 0.20 0.00 42.88 4.94
116 117 2.330254 CACAGGAATGTGTTGCGGT 58.670 52.632 0.20 0.00 34.72 5.68
124 125 2.585330 TGTTGATGCACACAGGAATGT 58.415 42.857 0.00 0.00 0.00 2.71
125 126 3.861276 ATGTTGATGCACACAGGAATG 57.139 42.857 0.00 0.00 0.00 2.67
126 127 5.622914 GCTTAATGTTGATGCACACAGGAAT 60.623 40.000 0.00 0.00 0.00 3.01
127 128 4.321156 GCTTAATGTTGATGCACACAGGAA 60.321 41.667 0.00 0.00 0.00 3.36
128 129 3.191162 GCTTAATGTTGATGCACACAGGA 59.809 43.478 0.00 0.00 0.00 3.86
129 130 3.192001 AGCTTAATGTTGATGCACACAGG 59.808 43.478 0.00 0.00 0.00 4.00
130 131 4.155462 AGAGCTTAATGTTGATGCACACAG 59.845 41.667 0.00 0.00 0.00 3.66
131 132 4.074259 AGAGCTTAATGTTGATGCACACA 58.926 39.130 0.00 0.00 0.00 3.72
132 133 4.409570 CAGAGCTTAATGTTGATGCACAC 58.590 43.478 0.00 0.00 0.00 3.82
133 134 3.441222 CCAGAGCTTAATGTTGATGCACA 59.559 43.478 0.00 0.00 0.00 4.57
134 135 3.441572 ACCAGAGCTTAATGTTGATGCAC 59.558 43.478 0.00 0.00 0.00 4.57
135 136 3.689347 ACCAGAGCTTAATGTTGATGCA 58.311 40.909 0.00 0.00 0.00 3.96
136 137 4.397417 AGAACCAGAGCTTAATGTTGATGC 59.603 41.667 0.00 0.00 0.00 3.91
137 138 6.506500 AAGAACCAGAGCTTAATGTTGATG 57.493 37.500 0.00 0.00 0.00 3.07
138 139 7.398024 ACTAAGAACCAGAGCTTAATGTTGAT 58.602 34.615 0.00 0.00 0.00 2.57
139 140 6.769512 ACTAAGAACCAGAGCTTAATGTTGA 58.230 36.000 0.00 0.00 0.00 3.18
140 141 7.201565 GCTACTAAGAACCAGAGCTTAATGTTG 60.202 40.741 0.00 0.00 0.00 3.33
141 142 6.819146 GCTACTAAGAACCAGAGCTTAATGTT 59.181 38.462 0.00 0.00 0.00 2.71
142 143 6.070767 TGCTACTAAGAACCAGAGCTTAATGT 60.071 38.462 0.00 0.00 0.00 2.71
143 144 6.341316 TGCTACTAAGAACCAGAGCTTAATG 58.659 40.000 0.00 0.00 0.00 1.90
144 145 6.546428 TGCTACTAAGAACCAGAGCTTAAT 57.454 37.500 0.00 0.00 0.00 1.40
145 146 5.995565 TGCTACTAAGAACCAGAGCTTAA 57.004 39.130 0.00 0.00 0.00 1.85
146 147 5.656859 TCATGCTACTAAGAACCAGAGCTTA 59.343 40.000 0.00 0.00 0.00 3.09
147 148 4.467795 TCATGCTACTAAGAACCAGAGCTT 59.532 41.667 0.00 0.00 0.00 3.74
148 149 4.026744 TCATGCTACTAAGAACCAGAGCT 58.973 43.478 0.00 0.00 0.00 4.09
149 150 4.392921 TCATGCTACTAAGAACCAGAGC 57.607 45.455 0.00 0.00 0.00 4.09
150 151 6.154203 TCATCATGCTACTAAGAACCAGAG 57.846 41.667 0.00 0.00 0.00 3.35
151 152 6.737720 ATCATCATGCTACTAAGAACCAGA 57.262 37.500 0.00 0.00 0.00 3.86
152 153 7.798596 AAATCATCATGCTACTAAGAACCAG 57.201 36.000 0.00 0.00 0.00 4.00
153 154 7.611467 ACAAAATCATCATGCTACTAAGAACCA 59.389 33.333 0.00 0.00 0.00 3.67
154 155 7.989826 ACAAAATCATCATGCTACTAAGAACC 58.010 34.615 0.00 0.00 0.00 3.62
155 156 9.495754 GAACAAAATCATCATGCTACTAAGAAC 57.504 33.333 0.00 0.00 0.00 3.01
156 157 9.230122 TGAACAAAATCATCATGCTACTAAGAA 57.770 29.630 0.00 0.00 0.00 2.52
157 158 8.791327 TGAACAAAATCATCATGCTACTAAGA 57.209 30.769 0.00 0.00 0.00 2.10
170 171 8.345565 GCTAAATACCGAGATGAACAAAATCAT 58.654 33.333 0.00 0.00 42.62 2.45
171 172 7.552687 AGCTAAATACCGAGATGAACAAAATCA 59.447 33.333 0.00 0.00 0.00 2.57
172 173 7.920738 AGCTAAATACCGAGATGAACAAAATC 58.079 34.615 0.00 0.00 0.00 2.17
173 174 7.865706 AGCTAAATACCGAGATGAACAAAAT 57.134 32.000 0.00 0.00 0.00 1.82
174 175 7.681939 AAGCTAAATACCGAGATGAACAAAA 57.318 32.000 0.00 0.00 0.00 2.44
175 176 7.681939 AAAGCTAAATACCGAGATGAACAAA 57.318 32.000 0.00 0.00 0.00 2.83
176 177 7.174253 ACAAAAGCTAAATACCGAGATGAACAA 59.826 33.333 0.00 0.00 0.00 2.83
177 178 6.653320 ACAAAAGCTAAATACCGAGATGAACA 59.347 34.615 0.00 0.00 0.00 3.18
178 179 7.073342 ACAAAAGCTAAATACCGAGATGAAC 57.927 36.000 0.00 0.00 0.00 3.18
179 180 7.681939 AACAAAAGCTAAATACCGAGATGAA 57.318 32.000 0.00 0.00 0.00 2.57
180 181 7.606456 AGAAACAAAAGCTAAATACCGAGATGA 59.394 33.333 0.00 0.00 0.00 2.92
181 182 7.752695 AGAAACAAAAGCTAAATACCGAGATG 58.247 34.615 0.00 0.00 0.00 2.90
182 183 7.923414 AGAAACAAAAGCTAAATACCGAGAT 57.077 32.000 0.00 0.00 0.00 2.75
183 184 7.332678 GGTAGAAACAAAAGCTAAATACCGAGA 59.667 37.037 0.00 0.00 0.00 4.04
184 185 7.461918 GGTAGAAACAAAAGCTAAATACCGAG 58.538 38.462 0.00 0.00 0.00 4.63
185 186 7.368480 GGTAGAAACAAAAGCTAAATACCGA 57.632 36.000 0.00 0.00 0.00 4.69
186 187 6.245724 CGGTAGAAACAAAAGCTAAATACCG 58.754 40.000 5.67 5.67 44.69 4.02
187 188 6.025896 GCGGTAGAAACAAAAGCTAAATACC 58.974 40.000 0.00 0.00 0.00 2.73
188 189 6.522165 GTGCGGTAGAAACAAAAGCTAAATAC 59.478 38.462 0.00 0.00 0.00 1.89
189 190 6.428771 AGTGCGGTAGAAACAAAAGCTAAATA 59.571 34.615 0.00 0.00 0.00 1.40
190 191 5.240844 AGTGCGGTAGAAACAAAAGCTAAAT 59.759 36.000 0.00 0.00 0.00 1.40
191 192 4.577283 AGTGCGGTAGAAACAAAAGCTAAA 59.423 37.500 0.00 0.00 0.00 1.85
192 193 4.024387 CAGTGCGGTAGAAACAAAAGCTAA 60.024 41.667 0.00 0.00 0.00 3.09
193 194 3.496884 CAGTGCGGTAGAAACAAAAGCTA 59.503 43.478 0.00 0.00 0.00 3.32
194 195 2.290641 CAGTGCGGTAGAAACAAAAGCT 59.709 45.455 0.00 0.00 0.00 3.74
195 196 2.289547 TCAGTGCGGTAGAAACAAAAGC 59.710 45.455 0.00 0.00 0.00 3.51
196 197 4.545823 TTCAGTGCGGTAGAAACAAAAG 57.454 40.909 0.00 0.00 0.00 2.27
197 198 4.576873 TGATTCAGTGCGGTAGAAACAAAA 59.423 37.500 0.00 0.00 0.00 2.44
198 199 4.130857 TGATTCAGTGCGGTAGAAACAAA 58.869 39.130 0.00 0.00 0.00 2.83
199 200 3.734463 TGATTCAGTGCGGTAGAAACAA 58.266 40.909 0.00 0.00 0.00 2.83
200 201 3.394674 TGATTCAGTGCGGTAGAAACA 57.605 42.857 0.00 0.00 0.00 2.83
201 202 4.437390 CCATTGATTCAGTGCGGTAGAAAC 60.437 45.833 3.75 0.00 0.00 2.78
202 203 3.689161 CCATTGATTCAGTGCGGTAGAAA 59.311 43.478 3.75 0.00 0.00 2.52
203 204 3.055458 TCCATTGATTCAGTGCGGTAGAA 60.055 43.478 3.75 0.00 0.00 2.10
204 205 2.499693 TCCATTGATTCAGTGCGGTAGA 59.500 45.455 3.75 0.00 0.00 2.59
205 206 2.905075 TCCATTGATTCAGTGCGGTAG 58.095 47.619 3.75 0.00 0.00 3.18
206 207 3.342377 TTCCATTGATTCAGTGCGGTA 57.658 42.857 3.75 0.00 0.00 4.02
207 208 2.198827 TTCCATTGATTCAGTGCGGT 57.801 45.000 3.75 0.00 0.00 5.68
208 209 2.159338 CCTTTCCATTGATTCAGTGCGG 60.159 50.000 3.75 0.00 0.00 5.69
209 210 2.159338 CCCTTTCCATTGATTCAGTGCG 60.159 50.000 3.75 0.00 0.00 5.34
210 211 3.091545 TCCCTTTCCATTGATTCAGTGC 58.908 45.455 3.75 0.00 0.00 4.40
211 212 4.036027 CGATCCCTTTCCATTGATTCAGTG 59.964 45.833 2.34 2.34 0.00 3.66
212 213 4.202441 CGATCCCTTTCCATTGATTCAGT 58.798 43.478 0.00 0.00 0.00 3.41
213 214 4.036027 CACGATCCCTTTCCATTGATTCAG 59.964 45.833 0.00 0.00 0.00 3.02
214 215 3.947196 CACGATCCCTTTCCATTGATTCA 59.053 43.478 0.00 0.00 0.00 2.57
215 216 3.243201 GCACGATCCCTTTCCATTGATTC 60.243 47.826 0.00 0.00 0.00 2.52
216 217 2.689983 GCACGATCCCTTTCCATTGATT 59.310 45.455 0.00 0.00 0.00 2.57
217 218 2.301346 GCACGATCCCTTTCCATTGAT 58.699 47.619 0.00 0.00 0.00 2.57
218 219 1.750193 GCACGATCCCTTTCCATTGA 58.250 50.000 0.00 0.00 0.00 2.57
219 220 0.378257 CGCACGATCCCTTTCCATTG 59.622 55.000 0.00 0.00 0.00 2.82
220 221 0.748005 CCGCACGATCCCTTTCCATT 60.748 55.000 0.00 0.00 0.00 3.16
221 222 1.153168 CCGCACGATCCCTTTCCAT 60.153 57.895 0.00 0.00 0.00 3.41
222 223 2.267642 CCGCACGATCCCTTTCCA 59.732 61.111 0.00 0.00 0.00 3.53
223 224 2.513897 CCCGCACGATCCCTTTCC 60.514 66.667 0.00 0.00 0.00 3.13
224 225 2.513897 CCCCGCACGATCCCTTTC 60.514 66.667 0.00 0.00 0.00 2.62
225 226 3.006728 TCCCCGCACGATCCCTTT 61.007 61.111 0.00 0.00 0.00 3.11
226 227 3.470888 CTCCCCGCACGATCCCTT 61.471 66.667 0.00 0.00 0.00 3.95
260 261 3.739589 TATTTCCTTCTGCCGTGGCCC 62.740 57.143 8.69 0.00 41.09 5.80
261 262 0.393808 TATTTCCTTCTGCCGTGGCC 60.394 55.000 8.69 0.00 41.09 5.36
262 263 0.733150 GTATTTCCTTCTGCCGTGGC 59.267 55.000 3.30 3.30 42.35 5.01
263 264 1.006832 CGTATTTCCTTCTGCCGTGG 58.993 55.000 0.00 0.00 0.00 4.94
264 265 1.006832 CCGTATTTCCTTCTGCCGTG 58.993 55.000 0.00 0.00 0.00 4.94
265 266 0.107848 CCCGTATTTCCTTCTGCCGT 60.108 55.000 0.00 0.00 0.00 5.68
266 267 0.177141 TCCCGTATTTCCTTCTGCCG 59.823 55.000 0.00 0.00 0.00 5.69
267 268 1.209747 ACTCCCGTATTTCCTTCTGCC 59.790 52.381 0.00 0.00 0.00 4.85
268 269 2.693267 ACTCCCGTATTTCCTTCTGC 57.307 50.000 0.00 0.00 0.00 4.26
269 270 4.324267 ACAAACTCCCGTATTTCCTTCTG 58.676 43.478 0.00 0.00 0.00 3.02
270 271 4.635699 ACAAACTCCCGTATTTCCTTCT 57.364 40.909 0.00 0.00 0.00 2.85
271 272 5.458015 CAAACAAACTCCCGTATTTCCTTC 58.542 41.667 0.00 0.00 0.00 3.46
272 273 4.261867 GCAAACAAACTCCCGTATTTCCTT 60.262 41.667 0.00 0.00 0.00 3.36
273 274 3.254903 GCAAACAAACTCCCGTATTTCCT 59.745 43.478 0.00 0.00 0.00 3.36
274 275 3.254903 AGCAAACAAACTCCCGTATTTCC 59.745 43.478 0.00 0.00 0.00 3.13
275 276 4.499037 AGCAAACAAACTCCCGTATTTC 57.501 40.909 0.00 0.00 0.00 2.17
276 277 4.929819 AAGCAAACAAACTCCCGTATTT 57.070 36.364 0.00 0.00 0.00 1.40
277 278 4.929819 AAAGCAAACAAACTCCCGTATT 57.070 36.364 0.00 0.00 0.00 1.89
278 279 5.067954 ACTAAAGCAAACAAACTCCCGTAT 58.932 37.500 0.00 0.00 0.00 3.06
279 280 4.453751 ACTAAAGCAAACAAACTCCCGTA 58.546 39.130 0.00 0.00 0.00 4.02
280 281 3.284617 ACTAAAGCAAACAAACTCCCGT 58.715 40.909 0.00 0.00 0.00 5.28
281 282 3.982576 ACTAAAGCAAACAAACTCCCG 57.017 42.857 0.00 0.00 0.00 5.14
282 283 6.035650 GTCAAAACTAAAGCAAACAAACTCCC 59.964 38.462 0.00 0.00 0.00 4.30
283 284 6.811665 AGTCAAAACTAAAGCAAACAAACTCC 59.188 34.615 0.00 0.00 32.59 3.85
284 285 7.201435 CCAGTCAAAACTAAAGCAAACAAACTC 60.201 37.037 0.00 0.00 33.25 3.01
285 286 6.589907 CCAGTCAAAACTAAAGCAAACAAACT 59.410 34.615 0.00 0.00 33.25 2.66
286 287 6.588373 TCCAGTCAAAACTAAAGCAAACAAAC 59.412 34.615 0.00 0.00 33.25 2.93
287 288 6.692486 TCCAGTCAAAACTAAAGCAAACAAA 58.308 32.000 0.00 0.00 33.25 2.83
288 289 6.274157 TCCAGTCAAAACTAAAGCAAACAA 57.726 33.333 0.00 0.00 33.25 2.83
289 290 5.906113 TCCAGTCAAAACTAAAGCAAACA 57.094 34.783 0.00 0.00 33.25 2.83
290 291 7.201522 CCTTTTCCAGTCAAAACTAAAGCAAAC 60.202 37.037 0.00 0.00 31.50 2.93
291 292 6.816140 CCTTTTCCAGTCAAAACTAAAGCAAA 59.184 34.615 0.00 0.00 31.50 3.68
292 293 6.153680 TCCTTTTCCAGTCAAAACTAAAGCAA 59.846 34.615 0.00 0.00 31.50 3.91
293 294 5.654650 TCCTTTTCCAGTCAAAACTAAAGCA 59.345 36.000 0.00 0.00 31.50 3.91
294 295 6.144078 TCCTTTTCCAGTCAAAACTAAAGC 57.856 37.500 0.00 0.00 31.50 3.51
295 296 7.041372 TCGATCCTTTTCCAGTCAAAACTAAAG 60.041 37.037 0.00 0.00 33.25 1.85
296 297 6.768861 TCGATCCTTTTCCAGTCAAAACTAAA 59.231 34.615 0.00 0.00 33.25 1.85
297 298 6.292923 TCGATCCTTTTCCAGTCAAAACTAA 58.707 36.000 0.00 0.00 33.25 2.24
298 299 5.860611 TCGATCCTTTTCCAGTCAAAACTA 58.139 37.500 0.00 0.00 33.25 2.24
299 300 4.714632 TCGATCCTTTTCCAGTCAAAACT 58.285 39.130 0.00 0.00 35.60 2.66
300 301 4.755123 TCTCGATCCTTTTCCAGTCAAAAC 59.245 41.667 0.00 0.00 0.00 2.43
301 302 4.968259 TCTCGATCCTTTTCCAGTCAAAA 58.032 39.130 0.00 0.00 0.00 2.44
302 303 4.563580 CCTCTCGATCCTTTTCCAGTCAAA 60.564 45.833 0.00 0.00 0.00 2.69
303 304 3.055819 CCTCTCGATCCTTTTCCAGTCAA 60.056 47.826 0.00 0.00 0.00 3.18
304 305 2.497675 CCTCTCGATCCTTTTCCAGTCA 59.502 50.000 0.00 0.00 0.00 3.41
305 306 2.159028 CCCTCTCGATCCTTTTCCAGTC 60.159 54.545 0.00 0.00 0.00 3.51
306 307 1.834263 CCCTCTCGATCCTTTTCCAGT 59.166 52.381 0.00 0.00 0.00 4.00
307 308 2.102252 CTCCCTCTCGATCCTTTTCCAG 59.898 54.545 0.00 0.00 0.00 3.86
308 309 2.111384 CTCCCTCTCGATCCTTTTCCA 58.889 52.381 0.00 0.00 0.00 3.53
309 310 1.414550 CCTCCCTCTCGATCCTTTTCC 59.585 57.143 0.00 0.00 0.00 3.13
310 311 1.414550 CCCTCCCTCTCGATCCTTTTC 59.585 57.143 0.00 0.00 0.00 2.29
311 312 1.008449 TCCCTCCCTCTCGATCCTTTT 59.992 52.381 0.00 0.00 0.00 2.27
312 313 0.637195 TCCCTCCCTCTCGATCCTTT 59.363 55.000 0.00 0.00 0.00 3.11
313 314 0.637195 TTCCCTCCCTCTCGATCCTT 59.363 55.000 0.00 0.00 0.00 3.36
314 315 0.637195 TTTCCCTCCCTCTCGATCCT 59.363 55.000 0.00 0.00 0.00 3.24
315 316 1.497161 TTTTCCCTCCCTCTCGATCC 58.503 55.000 0.00 0.00 0.00 3.36
316 317 2.436173 ACATTTTCCCTCCCTCTCGATC 59.564 50.000 0.00 0.00 0.00 3.69
317 318 2.482494 ACATTTTCCCTCCCTCTCGAT 58.518 47.619 0.00 0.00 0.00 3.59
318 319 1.952621 ACATTTTCCCTCCCTCTCGA 58.047 50.000 0.00 0.00 0.00 4.04
319 320 2.290323 ACAACATTTTCCCTCCCTCTCG 60.290 50.000 0.00 0.00 0.00 4.04
320 321 3.441500 ACAACATTTTCCCTCCCTCTC 57.558 47.619 0.00 0.00 0.00 3.20
321 322 4.508584 GGTTACAACATTTTCCCTCCCTCT 60.509 45.833 0.00 0.00 0.00 3.69
322 323 3.762288 GGTTACAACATTTTCCCTCCCTC 59.238 47.826 0.00 0.00 0.00 4.30
323 324 3.774734 GGTTACAACATTTTCCCTCCCT 58.225 45.455 0.00 0.00 0.00 4.20
324 325 2.490509 CGGTTACAACATTTTCCCTCCC 59.509 50.000 0.00 0.00 0.00 4.30
325 326 3.151554 ACGGTTACAACATTTTCCCTCC 58.848 45.455 0.00 0.00 0.00 4.30
326 327 3.816523 TGACGGTTACAACATTTTCCCTC 59.183 43.478 0.00 0.00 0.00 4.30
327 328 3.818773 CTGACGGTTACAACATTTTCCCT 59.181 43.478 0.00 0.00 0.00 4.20
328 329 3.816523 TCTGACGGTTACAACATTTTCCC 59.183 43.478 0.00 0.00 0.00 3.97
329 330 5.180492 TCATCTGACGGTTACAACATTTTCC 59.820 40.000 0.00 0.00 0.00 3.13
330 331 6.236017 TCATCTGACGGTTACAACATTTTC 57.764 37.500 0.00 0.00 0.00 2.29
331 332 6.485313 TCTTCATCTGACGGTTACAACATTTT 59.515 34.615 0.00 0.00 0.00 1.82
332 333 5.995282 TCTTCATCTGACGGTTACAACATTT 59.005 36.000 0.00 0.00 0.00 2.32
333 334 5.547465 TCTTCATCTGACGGTTACAACATT 58.453 37.500 0.00 0.00 0.00 2.71
334 335 5.147330 TCTTCATCTGACGGTTACAACAT 57.853 39.130 0.00 0.00 0.00 2.71
335 336 4.594123 TCTTCATCTGACGGTTACAACA 57.406 40.909 0.00 0.00 0.00 3.33
336 337 5.163854 CCATTCTTCATCTGACGGTTACAAC 60.164 44.000 0.00 0.00 0.00 3.32
337 338 4.935205 CCATTCTTCATCTGACGGTTACAA 59.065 41.667 0.00 0.00 0.00 2.41
338 339 4.221924 TCCATTCTTCATCTGACGGTTACA 59.778 41.667 0.00 0.00 0.00 2.41
339 340 4.755411 TCCATTCTTCATCTGACGGTTAC 58.245 43.478 0.00 0.00 0.00 2.50
340 341 5.359756 CATCCATTCTTCATCTGACGGTTA 58.640 41.667 0.00 0.00 0.00 2.85
341 342 3.981071 TCCATTCTTCATCTGACGGTT 57.019 42.857 0.00 0.00 0.00 4.44
342 343 3.432749 CCATCCATTCTTCATCTGACGGT 60.433 47.826 0.00 0.00 0.00 4.83
343 344 3.136763 CCATCCATTCTTCATCTGACGG 58.863 50.000 0.00 0.00 0.00 4.79
344 345 3.558829 CACCATCCATTCTTCATCTGACG 59.441 47.826 0.00 0.00 0.00 4.35
345 346 3.314635 GCACCATCCATTCTTCATCTGAC 59.685 47.826 0.00 0.00 0.00 3.51
346 347 3.548770 GCACCATCCATTCTTCATCTGA 58.451 45.455 0.00 0.00 0.00 3.27
347 348 2.289820 CGCACCATCCATTCTTCATCTG 59.710 50.000 0.00 0.00 0.00 2.90
348 349 2.569059 CGCACCATCCATTCTTCATCT 58.431 47.619 0.00 0.00 0.00 2.90
349 350 1.605710 CCGCACCATCCATTCTTCATC 59.394 52.381 0.00 0.00 0.00 2.92
350 351 1.683943 CCGCACCATCCATTCTTCAT 58.316 50.000 0.00 0.00 0.00 2.57
351 352 0.394216 CCCGCACCATCCATTCTTCA 60.394 55.000 0.00 0.00 0.00 3.02
352 353 0.107214 TCCCGCACCATCCATTCTTC 60.107 55.000 0.00 0.00 0.00 2.87
353 354 0.107017 CTCCCGCACCATCCATTCTT 60.107 55.000 0.00 0.00 0.00 2.52
354 355 1.274703 ACTCCCGCACCATCCATTCT 61.275 55.000 0.00 0.00 0.00 2.40
355 356 0.468226 TACTCCCGCACCATCCATTC 59.532 55.000 0.00 0.00 0.00 2.67
356 357 1.140312 ATACTCCCGCACCATCCATT 58.860 50.000 0.00 0.00 0.00 3.16
357 358 0.397941 CATACTCCCGCACCATCCAT 59.602 55.000 0.00 0.00 0.00 3.41
358 359 1.695114 CCATACTCCCGCACCATCCA 61.695 60.000 0.00 0.00 0.00 3.41
359 360 1.071471 CCATACTCCCGCACCATCC 59.929 63.158 0.00 0.00 0.00 3.51
360 361 0.687354 ATCCATACTCCCGCACCATC 59.313 55.000 0.00 0.00 0.00 3.51
361 362 0.397941 CATCCATACTCCCGCACCAT 59.602 55.000 0.00 0.00 0.00 3.55
362 363 1.695114 CCATCCATACTCCCGCACCA 61.695 60.000 0.00 0.00 0.00 4.17
363 364 1.071471 CCATCCATACTCCCGCACC 59.929 63.158 0.00 0.00 0.00 5.01
364 365 1.071471 CCCATCCATACTCCCGCAC 59.929 63.158 0.00 0.00 0.00 5.34
365 366 1.074850 TCCCATCCATACTCCCGCA 60.075 57.895 0.00 0.00 0.00 5.69
366 367 1.674057 CTCCCATCCATACTCCCGC 59.326 63.158 0.00 0.00 0.00 6.13
367 368 1.121407 TGCTCCCATCCATACTCCCG 61.121 60.000 0.00 0.00 0.00 5.14
368 369 0.398318 GTGCTCCCATCCATACTCCC 59.602 60.000 0.00 0.00 0.00 4.30
369 370 1.071385 CTGTGCTCCCATCCATACTCC 59.929 57.143 0.00 0.00 0.00 3.85
370 371 1.071385 CCTGTGCTCCCATCCATACTC 59.929 57.143 0.00 0.00 0.00 2.59
371 372 1.135094 CCTGTGCTCCCATCCATACT 58.865 55.000 0.00 0.00 0.00 2.12
372 373 1.071385 CTCCTGTGCTCCCATCCATAC 59.929 57.143 0.00 0.00 0.00 2.39
373 374 1.427809 CTCCTGTGCTCCCATCCATA 58.572 55.000 0.00 0.00 0.00 2.74
374 375 1.351080 CCTCCTGTGCTCCCATCCAT 61.351 60.000 0.00 0.00 0.00 3.41
375 376 1.997311 CCTCCTGTGCTCCCATCCA 60.997 63.158 0.00 0.00 0.00 3.41
376 377 2.750657 CCCTCCTGTGCTCCCATCC 61.751 68.421 0.00 0.00 0.00 3.51
377 378 1.690633 TCCCTCCTGTGCTCCCATC 60.691 63.158 0.00 0.00 0.00 3.51
378 379 1.692042 CTCCCTCCTGTGCTCCCAT 60.692 63.158 0.00 0.00 0.00 4.00
379 380 2.284921 CTCCCTCCTGTGCTCCCA 60.285 66.667 0.00 0.00 0.00 4.37
380 381 2.039624 TCTCCCTCCTGTGCTCCC 59.960 66.667 0.00 0.00 0.00 4.30
381 382 2.063378 CCTCTCCCTCCTGTGCTCC 61.063 68.421 0.00 0.00 0.00 4.70
382 383 1.000993 TCCTCTCCCTCCTGTGCTC 59.999 63.158 0.00 0.00 0.00 4.26
383 384 1.001503 CTCCTCTCCCTCCTGTGCT 59.998 63.158 0.00 0.00 0.00 4.40
384 385 2.063378 CCTCCTCTCCCTCCTGTGC 61.063 68.421 0.00 0.00 0.00 4.57
385 386 2.063378 GCCTCCTCTCCCTCCTGTG 61.063 68.421 0.00 0.00 0.00 3.66
386 387 2.112072 TTGCCTCCTCTCCCTCCTGT 62.112 60.000 0.00 0.00 0.00 4.00
387 388 1.306482 TTGCCTCCTCTCCCTCCTG 60.306 63.158 0.00 0.00 0.00 3.86
388 389 1.002792 CTTGCCTCCTCTCCCTCCT 59.997 63.158 0.00 0.00 0.00 3.69
389 390 2.741055 GCTTGCCTCCTCTCCCTCC 61.741 68.421 0.00 0.00 0.00 4.30
390 391 2.741055 GGCTTGCCTCCTCTCCCTC 61.741 68.421 4.11 0.00 0.00 4.30
391 392 2.690510 GGCTTGCCTCCTCTCCCT 60.691 66.667 4.11 0.00 0.00 4.20
392 393 2.690510 AGGCTTGCCTCCTCTCCC 60.691 66.667 8.56 0.00 0.00 4.30
393 394 2.907236 GAGGCTTGCCTCCTCTCC 59.093 66.667 26.44 5.32 45.13 3.71
394 395 2.291457 GACGAGGCTTGCCTCCTCTC 62.291 65.000 29.27 19.38 46.11 3.20
395 396 2.284258 ACGAGGCTTGCCTCCTCT 60.284 61.111 29.27 13.75 46.11 3.69
396 397 2.185608 GACGAGGCTTGCCTCCTC 59.814 66.667 29.27 24.08 45.12 3.71
397 398 3.394836 GGACGAGGCTTGCCTCCT 61.395 66.667 29.27 20.92 36.46 3.69
398 399 4.475135 GGGACGAGGCTTGCCTCC 62.475 72.222 29.27 19.44 33.62 4.30
399 400 3.036429 ATGGGACGAGGCTTGCCTC 62.036 63.158 26.80 26.80 0.00 4.70
400 401 3.011517 ATGGGACGAGGCTTGCCT 61.012 61.111 14.69 14.69 0.00 4.75
401 402 2.825836 CATGGGACGAGGCTTGCC 60.826 66.667 2.97 2.97 0.00 4.52
402 403 2.109126 GTCATGGGACGAGGCTTGC 61.109 63.158 0.37 0.00 33.68 4.01
403 404 1.450312 GGTCATGGGACGAGGCTTG 60.450 63.158 0.00 0.00 45.28 4.01
404 405 1.903877 CTGGTCATGGGACGAGGCTT 61.904 60.000 0.00 0.00 43.69 4.35
405 406 2.284625 TGGTCATGGGACGAGGCT 60.285 61.111 0.00 0.00 45.28 4.58
406 407 2.187946 CTGGTCATGGGACGAGGC 59.812 66.667 0.00 0.00 43.69 4.70
413 414 2.620627 GACCTTTAACCCTGGTCATGGG 60.621 54.545 6.52 0.00 46.79 4.00
414 415 2.723273 GACCTTTAACCCTGGTCATGG 58.277 52.381 6.52 0.00 46.79 3.66
419 420 1.073098 CCCTGACCTTTAACCCTGGT 58.927 55.000 0.00 0.00 36.70 4.00
420 421 1.073098 ACCCTGACCTTTAACCCTGG 58.927 55.000 0.00 0.00 0.00 4.45
421 422 1.271926 CCACCCTGACCTTTAACCCTG 60.272 57.143 0.00 0.00 0.00 4.45
422 423 1.073098 CCACCCTGACCTTTAACCCT 58.927 55.000 0.00 0.00 0.00 4.34
423 424 0.611062 GCCACCCTGACCTTTAACCC 60.611 60.000 0.00 0.00 0.00 4.11
424 425 0.111639 TGCCACCCTGACCTTTAACC 59.888 55.000 0.00 0.00 0.00 2.85
425 426 2.215942 ATGCCACCCTGACCTTTAAC 57.784 50.000 0.00 0.00 0.00 2.01
426 427 2.916934 ACTATGCCACCCTGACCTTTAA 59.083 45.455 0.00 0.00 0.00 1.52
427 428 2.238646 CACTATGCCACCCTGACCTTTA 59.761 50.000 0.00 0.00 0.00 1.85
428 429 1.004745 CACTATGCCACCCTGACCTTT 59.995 52.381 0.00 0.00 0.00 3.11
429 430 0.620556 CACTATGCCACCCTGACCTT 59.379 55.000 0.00 0.00 0.00 3.50
430 431 1.274703 CCACTATGCCACCCTGACCT 61.275 60.000 0.00 0.00 0.00 3.85
431 432 1.224592 CCACTATGCCACCCTGACC 59.775 63.158 0.00 0.00 0.00 4.02
432 433 1.224592 CCCACTATGCCACCCTGAC 59.775 63.158 0.00 0.00 0.00 3.51
433 434 2.679342 GCCCACTATGCCACCCTGA 61.679 63.158 0.00 0.00 0.00 3.86
434 435 2.124151 GCCCACTATGCCACCCTG 60.124 66.667 0.00 0.00 0.00 4.45
440 441 2.203070 CAGTCGGCCCACTATGCC 60.203 66.667 1.43 0.00 45.70 4.40
441 442 0.392461 TTTCAGTCGGCCCACTATGC 60.392 55.000 1.43 0.00 0.00 3.14
442 443 1.369625 GTTTCAGTCGGCCCACTATG 58.630 55.000 1.43 0.00 0.00 2.23
443 444 0.252197 GGTTTCAGTCGGCCCACTAT 59.748 55.000 1.43 0.00 0.00 2.12
444 445 1.122632 TGGTTTCAGTCGGCCCACTA 61.123 55.000 1.43 0.00 0.00 2.74
445 446 2.397413 CTGGTTTCAGTCGGCCCACT 62.397 60.000 0.00 0.00 36.30 4.00
446 447 1.966451 CTGGTTTCAGTCGGCCCAC 60.966 63.158 0.00 0.00 36.30 4.61
447 448 2.429930 CTGGTTTCAGTCGGCCCA 59.570 61.111 0.00 0.00 36.30 5.36
455 456 3.775661 ACCGTTTTTGACTGGTTTCAG 57.224 42.857 0.00 0.00 46.10 3.02
456 457 4.522722 AAACCGTTTTTGACTGGTTTCA 57.477 36.364 2.54 0.00 44.32 2.69
457 458 5.038683 CCTAAACCGTTTTTGACTGGTTTC 58.961 41.667 11.14 0.00 44.32 2.78
458 459 4.142116 CCCTAAACCGTTTTTGACTGGTTT 60.142 41.667 12.29 12.29 46.64 3.27
459 460 3.382227 CCCTAAACCGTTTTTGACTGGTT 59.618 43.478 0.96 0.00 42.69 3.67
460 461 2.953648 CCCTAAACCGTTTTTGACTGGT 59.046 45.455 0.96 0.00 36.95 4.00
461 462 2.953648 ACCCTAAACCGTTTTTGACTGG 59.046 45.455 0.96 0.00 0.00 4.00
462 463 4.642445 AACCCTAAACCGTTTTTGACTG 57.358 40.909 0.96 0.00 0.00 3.51
463 464 6.964807 ATTAACCCTAAACCGTTTTTGACT 57.035 33.333 0.96 0.00 0.00 3.41
464 465 7.428020 AGAATTAACCCTAAACCGTTTTTGAC 58.572 34.615 0.96 0.00 0.00 3.18
465 466 7.585579 AGAATTAACCCTAAACCGTTTTTGA 57.414 32.000 0.96 0.00 0.00 2.69
466 467 7.707464 ACAAGAATTAACCCTAAACCGTTTTTG 59.293 33.333 0.96 0.00 0.00 2.44
467 468 7.784037 ACAAGAATTAACCCTAAACCGTTTTT 58.216 30.769 0.96 0.00 0.00 1.94
468 469 7.068470 TGACAAGAATTAACCCTAAACCGTTTT 59.932 33.333 0.96 0.00 0.00 2.43
469 470 6.546772 TGACAAGAATTAACCCTAAACCGTTT 59.453 34.615 1.40 1.40 0.00 3.60
470 471 6.063404 TGACAAGAATTAACCCTAAACCGTT 58.937 36.000 0.00 0.00 0.00 4.44
471 472 5.623169 TGACAAGAATTAACCCTAAACCGT 58.377 37.500 0.00 0.00 0.00 4.83
472 473 6.563222 TTGACAAGAATTAACCCTAAACCG 57.437 37.500 0.00 0.00 0.00 4.44
473 474 9.772973 AAAATTGACAAGAATTAACCCTAAACC 57.227 29.630 0.00 0.00 0.00 3.27
478 479 9.898152 TTTCAAAAATTGACAAGAATTAACCCT 57.102 25.926 0.00 0.00 39.87 4.34
487 488 9.434420 ACATCAAACTTTCAAAAATTGACAAGA 57.566 25.926 15.42 0.00 39.87 3.02
527 528 5.445964 AGATACAACACCAAACTCCAAAGT 58.554 37.500 0.00 0.00 37.32 2.66
528 529 6.391227 AAGATACAACACCAAACTCCAAAG 57.609 37.500 0.00 0.00 0.00 2.77
601 609 3.127376 ACCACGTACAAAACACCTCAAAC 59.873 43.478 0.00 0.00 0.00 2.93
608 616 4.271533 TCATCAGAACCACGTACAAAACAC 59.728 41.667 0.00 0.00 0.00 3.32
745 756 1.270826 CTGTCGTGAGAGATGGTGTGT 59.729 52.381 0.00 0.00 43.49 3.72
753 764 2.333417 GGGTCGCTGTCGTGAGAGA 61.333 63.158 0.00 0.00 43.49 3.10
754 765 2.142357 TTGGGTCGCTGTCGTGAGAG 62.142 60.000 0.00 0.00 43.49 3.20
792 803 1.140312 TCTGGAGAGCACAAGGGTTT 58.860 50.000 0.00 0.00 0.00 3.27
831 845 6.039717 CACCTGATTATTTATGGTTGGTGGAG 59.960 42.308 0.00 0.00 38.83 3.86
919 933 2.622190 GGATTTAAAGGGGGCGGAGAAA 60.622 50.000 0.00 0.00 0.00 2.52
920 934 1.064240 GGATTTAAAGGGGGCGGAGAA 60.064 52.381 0.00 0.00 0.00 2.87
950 983 0.317103 CCTGCGACGGATAAGAGACG 60.317 60.000 0.00 0.00 0.00 4.18
956 989 0.384309 CTGCTACCTGCGACGGATAA 59.616 55.000 0.00 0.00 46.63 1.75
990 1023 4.783621 TCTGCCATCGCTGGTGCC 62.784 66.667 7.21 0.00 45.10 5.01
1089 1138 1.226603 GACGAAGATGACGGACCCG 60.227 63.158 6.94 6.94 46.03 5.28
1560 1609 2.165167 CCAAAGCAGACCATGTGACAT 58.835 47.619 0.00 0.00 0.00 3.06
1630 1679 5.046087 ACATCATCAAACTGGACAGATCTCA 60.046 40.000 6.29 0.00 0.00 3.27
1679 1728 0.249868 TCACTTCTCAACAGGGCACG 60.250 55.000 0.00 0.00 0.00 5.34
1746 1795 2.600731 CACTTACCTCAAGCTGTCGAG 58.399 52.381 0.00 0.00 37.83 4.04
1766 1847 5.393027 CCCTTACACAATTGCAATACACTCC 60.393 44.000 13.39 0.00 0.00 3.85
1772 1853 4.599041 AGAGCCCTTACACAATTGCAATA 58.401 39.130 13.39 0.00 0.00 1.90
1833 1914 6.978674 TTTCTCTGGTTTCTTCTCTACTCA 57.021 37.500 0.00 0.00 0.00 3.41
1886 1969 1.142060 CCACACCACCTCTGTACCAAA 59.858 52.381 0.00 0.00 0.00 3.28
1939 2022 5.333111 GGTTAGTCACGACAATTCACTGTTC 60.333 44.000 0.00 0.00 0.00 3.18
1964 2047 3.550842 GGAGTCATGGTTTGTCAACTTGC 60.551 47.826 0.00 0.00 32.90 4.01
1977 2060 2.867109 AAGTTCCTGTGGAGTCATGG 57.133 50.000 0.00 0.00 31.21 3.66
1978 2061 5.152623 TCTAAAGTTCCTGTGGAGTCATG 57.847 43.478 0.00 0.00 31.21 3.07
1979 2062 6.013379 TCAATCTAAAGTTCCTGTGGAGTCAT 60.013 38.462 0.00 0.00 31.21 3.06
1980 2063 5.306937 TCAATCTAAAGTTCCTGTGGAGTCA 59.693 40.000 0.00 0.00 31.21 3.41
1981 2064 5.794894 TCAATCTAAAGTTCCTGTGGAGTC 58.205 41.667 0.00 0.00 31.21 3.36
1989 2232 5.183904 GCCACATGTTCAATCTAAAGTTCCT 59.816 40.000 0.00 0.00 0.00 3.36
2073 2318 4.066646 TGGTTTGACTGATTTCGACTCA 57.933 40.909 0.00 0.00 0.00 3.41
2138 2383 4.271049 ACGGACATAAATCAGCTGAAATCG 59.729 41.667 22.50 16.73 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.