Multiple sequence alignment - TraesCS7D01G357000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G357000 chr7D 100.000 3108 0 0 1 3108 460108486 460111593 0.000000e+00 5740
1 TraesCS7D01G357000 chr7D 81.744 1709 287 18 493 2183 460281672 460283373 0.000000e+00 1404
2 TraesCS7D01G357000 chr7B 91.758 2463 159 20 456 2902 482488391 482490825 0.000000e+00 3384
3 TraesCS7D01G357000 chr7B 81.233 1119 202 6 464 1577 482686289 482687404 0.000000e+00 896
4 TraesCS7D01G357000 chr7B 84.828 580 79 5 1681 2254 482687600 482688176 2.690000e-160 575
5 TraesCS7D01G357000 chr7B 81.422 436 75 5 1681 2115 482075383 482074953 4.930000e-93 351
6 TraesCS7D01G357000 chr7A 91.237 2077 143 24 456 2498 539447738 539445667 0.000000e+00 2791
7 TraesCS7D01G357000 chr7A 93.712 986 61 1 456 1441 539405375 539404391 0.000000e+00 1476
8 TraesCS7D01G357000 chr7A 80.701 1855 325 23 502 2335 539324012 539322170 0.000000e+00 1411
9 TraesCS7D01G357000 chr7A 90.880 932 77 7 1434 2359 539403682 539402753 0.000000e+00 1243
10 TraesCS7D01G357000 chr7A 84.602 578 45 12 2358 2922 539445198 539444652 4.560000e-148 534
11 TraesCS7D01G357000 chr7A 90.667 375 34 1 1986 2359 539445661 539445287 5.990000e-137 497
12 TraesCS7D01G357000 chr7A 86.595 373 30 6 2358 2723 539402672 539402313 8.080000e-106 394
13 TraesCS7D01G357000 chr2B 80.279 1790 273 53 464 2195 784190544 784192311 0.000000e+00 1277
14 TraesCS7D01G357000 chr2B 80.260 1692 272 42 464 2109 798130186 798131861 0.000000e+00 1218
15 TraesCS7D01G357000 chr2A 80.047 1689 257 54 464 2109 764310908 764312559 0.000000e+00 1179
16 TraesCS7D01G357000 chr2A 78.356 1691 291 48 464 2115 764258100 764259754 0.000000e+00 1026
17 TraesCS7D01G357000 chr2D 79.669 1692 261 54 464 2109 638806228 638807882 0.000000e+00 1142
18 TraesCS7D01G357000 chr2D 96.667 450 14 1 1 450 498317235 498317683 0.000000e+00 747
19 TraesCS7D01G357000 chr3D 98.000 450 7 2 1 450 593312786 593313233 0.000000e+00 780
20 TraesCS7D01G357000 chr3D 97.333 450 11 1 1 450 29757018 29756570 0.000000e+00 763
21 TraesCS7D01G357000 chr3D 97.111 450 10 2 1 450 585361094 585361540 0.000000e+00 756
22 TraesCS7D01G357000 chr1D 97.111 450 11 2 1 450 453641448 453641001 0.000000e+00 758
23 TraesCS7D01G357000 chr1D 96.444 450 15 1 1 450 375183027 375182579 0.000000e+00 741
24 TraesCS7D01G357000 chr5D 96.667 450 13 1 1 450 565259041 565258594 0.000000e+00 747
25 TraesCS7D01G357000 chr6B 95.556 450 19 1 1 450 621113603 621114051 0.000000e+00 719
26 TraesCS7D01G357000 chr1B 93.333 450 27 3 2 450 636181834 636181387 0.000000e+00 662


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G357000 chr7D 460108486 460111593 3107 False 5740.000000 5740 100.000000 1 3108 1 chr7D.!!$F1 3107
1 TraesCS7D01G357000 chr7D 460281672 460283373 1701 False 1404.000000 1404 81.744000 493 2183 1 chr7D.!!$F2 1690
2 TraesCS7D01G357000 chr7B 482488391 482490825 2434 False 3384.000000 3384 91.758000 456 2902 1 chr7B.!!$F1 2446
3 TraesCS7D01G357000 chr7B 482686289 482688176 1887 False 735.500000 896 83.030500 464 2254 2 chr7B.!!$F2 1790
4 TraesCS7D01G357000 chr7A 539322170 539324012 1842 True 1411.000000 1411 80.701000 502 2335 1 chr7A.!!$R1 1833
5 TraesCS7D01G357000 chr7A 539444652 539447738 3086 True 1274.000000 2791 88.835333 456 2922 3 chr7A.!!$R3 2466
6 TraesCS7D01G357000 chr7A 539402313 539405375 3062 True 1037.666667 1476 90.395667 456 2723 3 chr7A.!!$R2 2267
7 TraesCS7D01G357000 chr2B 784190544 784192311 1767 False 1277.000000 1277 80.279000 464 2195 1 chr2B.!!$F1 1731
8 TraesCS7D01G357000 chr2B 798130186 798131861 1675 False 1218.000000 1218 80.260000 464 2109 1 chr2B.!!$F2 1645
9 TraesCS7D01G357000 chr2A 764310908 764312559 1651 False 1179.000000 1179 80.047000 464 2109 1 chr2A.!!$F2 1645
10 TraesCS7D01G357000 chr2A 764258100 764259754 1654 False 1026.000000 1026 78.356000 464 2115 1 chr2A.!!$F1 1651
11 TraesCS7D01G357000 chr2D 638806228 638807882 1654 False 1142.000000 1142 79.669000 464 2109 1 chr2D.!!$F2 1645

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 91 0.032615 AGAGAGGGAGTGAGCCGATT 60.033 55.0 0.00 0.00 0.0 3.34 F
366 367 0.036306 AAAAAGACGATCGTGCCCCT 59.964 50.0 28.12 13.68 0.0 4.79 F
407 408 0.247736 GATCTCAGCCGTCCTTGTGT 59.752 55.0 0.00 0.00 0.0 3.72 F
413 414 0.250338 AGCCGTCCTTGTGTTTCTCC 60.250 55.0 0.00 0.00 0.0 3.71 F
419 420 0.321653 CCTTGTGTTTCTCCCCCTCG 60.322 60.0 0.00 0.00 0.0 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1137 1144 0.321919 TGAGTGCCTGACATTCAGCC 60.322 55.000 0.00 0.00 42.98 4.85 R
1358 1370 1.463674 CAGGTAATCCAAAGCGGCTT 58.536 50.000 9.94 9.94 35.89 4.35 R
1362 1374 3.243068 GGTTATGCAGGTAATCCAAAGCG 60.243 47.826 0.00 0.00 35.89 4.68 R
2038 2907 3.665675 AACGTCCTGCATCGAGGGC 62.666 63.158 11.80 1.55 34.02 5.19 R
2122 2992 4.976116 AGCAACGTTTGAGCAATAGAAAAC 59.024 37.500 11.17 0.00 0.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.003788 CGGTGGGGTTGAGCGAGT 62.004 66.667 0.00 0.00 36.43 4.18
22 23 2.642254 CGGTGGGGTTGAGCGAGTA 61.642 63.158 0.00 0.00 36.43 2.59
23 24 1.218316 GGTGGGGTTGAGCGAGTAG 59.782 63.158 0.00 0.00 0.00 2.57
24 25 1.218316 GTGGGGTTGAGCGAGTAGG 59.782 63.158 0.00 0.00 0.00 3.18
25 26 1.229082 TGGGGTTGAGCGAGTAGGT 60.229 57.895 0.00 0.00 0.00 3.08
26 27 1.218316 GGGGTTGAGCGAGTAGGTG 59.782 63.158 0.00 0.00 0.00 4.00
27 28 1.448013 GGGTTGAGCGAGTAGGTGC 60.448 63.158 0.00 0.00 0.00 5.01
28 29 1.292223 GGTTGAGCGAGTAGGTGCA 59.708 57.895 0.00 0.00 0.00 4.57
29 30 0.737715 GGTTGAGCGAGTAGGTGCAG 60.738 60.000 0.00 0.00 0.00 4.41
30 31 0.038159 GTTGAGCGAGTAGGTGCAGT 60.038 55.000 0.00 0.00 0.00 4.40
31 32 0.038251 TTGAGCGAGTAGGTGCAGTG 60.038 55.000 0.00 0.00 0.00 3.66
32 33 1.153745 GAGCGAGTAGGTGCAGTGG 60.154 63.158 0.00 0.00 0.00 4.00
33 34 2.815647 GCGAGTAGGTGCAGTGGC 60.816 66.667 0.00 0.00 41.68 5.01
34 35 2.507102 CGAGTAGGTGCAGTGGCG 60.507 66.667 0.00 0.00 45.35 5.69
35 36 2.125512 GAGTAGGTGCAGTGGCGG 60.126 66.667 0.00 0.00 45.35 6.13
36 37 3.665675 GAGTAGGTGCAGTGGCGGG 62.666 68.421 0.00 0.00 45.35 6.13
37 38 4.778143 GTAGGTGCAGTGGCGGGG 62.778 72.222 0.00 0.00 45.35 5.73
50 51 4.271816 CGGGGCGATGGAGACGAG 62.272 72.222 0.00 0.00 0.00 4.18
51 52 3.917760 GGGGCGATGGAGACGAGG 61.918 72.222 0.00 0.00 0.00 4.63
52 53 3.917760 GGGCGATGGAGACGAGGG 61.918 72.222 0.00 0.00 0.00 4.30
53 54 3.917760 GGCGATGGAGACGAGGGG 61.918 72.222 0.00 0.00 0.00 4.79
54 55 3.917760 GCGATGGAGACGAGGGGG 61.918 72.222 0.00 0.00 0.00 5.40
55 56 2.123854 CGATGGAGACGAGGGGGA 60.124 66.667 0.00 0.00 0.00 4.81
56 57 2.196925 CGATGGAGACGAGGGGGAG 61.197 68.421 0.00 0.00 0.00 4.30
57 58 1.230497 GATGGAGACGAGGGGGAGA 59.770 63.158 0.00 0.00 0.00 3.71
58 59 1.075896 ATGGAGACGAGGGGGAGAC 60.076 63.158 0.00 0.00 0.00 3.36
59 60 2.829458 GGAGACGAGGGGGAGACG 60.829 72.222 0.00 0.00 0.00 4.18
60 61 2.271497 GAGACGAGGGGGAGACGA 59.729 66.667 0.00 0.00 0.00 4.20
61 62 1.152922 GAGACGAGGGGGAGACGAT 60.153 63.158 0.00 0.00 0.00 3.73
62 63 1.448922 GAGACGAGGGGGAGACGATG 61.449 65.000 0.00 0.00 0.00 3.84
63 64 3.140225 GACGAGGGGGAGACGATGC 62.140 68.421 0.00 0.00 0.00 3.91
64 65 4.271816 CGAGGGGGAGACGATGCG 62.272 72.222 0.00 0.00 0.00 4.73
65 66 3.917760 GAGGGGGAGACGATGCGG 61.918 72.222 0.00 0.00 0.00 5.69
68 69 4.467084 GGGGAGACGATGCGGCAA 62.467 66.667 6.82 0.00 37.34 4.52
69 70 2.892425 GGGAGACGATGCGGCAAG 60.892 66.667 6.82 7.04 37.34 4.01
70 71 2.892425 GGAGACGATGCGGCAAGG 60.892 66.667 6.82 4.25 37.34 3.61
71 72 2.184322 GAGACGATGCGGCAAGGA 59.816 61.111 6.82 0.00 37.34 3.36
72 73 1.880340 GAGACGATGCGGCAAGGAG 60.880 63.158 6.82 1.12 37.34 3.69
73 74 2.184322 GACGATGCGGCAAGGAGA 59.816 61.111 6.82 0.00 33.63 3.71
74 75 1.880340 GACGATGCGGCAAGGAGAG 60.880 63.158 6.82 0.00 33.63 3.20
75 76 2.284798 GACGATGCGGCAAGGAGAGA 62.285 60.000 6.82 0.00 33.63 3.10
76 77 1.591059 CGATGCGGCAAGGAGAGAG 60.591 63.158 6.82 0.00 0.00 3.20
77 78 1.227497 GATGCGGCAAGGAGAGAGG 60.227 63.158 6.82 0.00 0.00 3.69
78 79 2.657102 GATGCGGCAAGGAGAGAGGG 62.657 65.000 6.82 0.00 0.00 4.30
79 80 3.077556 GCGGCAAGGAGAGAGGGA 61.078 66.667 0.00 0.00 0.00 4.20
80 81 3.087666 GCGGCAAGGAGAGAGGGAG 62.088 68.421 0.00 0.00 0.00 4.30
81 82 1.684049 CGGCAAGGAGAGAGGGAGT 60.684 63.158 0.00 0.00 0.00 3.85
82 83 1.904032 GGCAAGGAGAGAGGGAGTG 59.096 63.158 0.00 0.00 0.00 3.51
83 84 0.616111 GGCAAGGAGAGAGGGAGTGA 60.616 60.000 0.00 0.00 0.00 3.41
84 85 0.823460 GCAAGGAGAGAGGGAGTGAG 59.177 60.000 0.00 0.00 0.00 3.51
85 86 0.823460 CAAGGAGAGAGGGAGTGAGC 59.177 60.000 0.00 0.00 0.00 4.26
86 87 0.325203 AAGGAGAGAGGGAGTGAGCC 60.325 60.000 0.00 0.00 0.00 4.70
87 88 2.124693 GGAGAGAGGGAGTGAGCCG 61.125 68.421 0.00 0.00 0.00 5.52
88 89 1.077357 GAGAGAGGGAGTGAGCCGA 60.077 63.158 0.00 0.00 0.00 5.54
89 90 0.467290 GAGAGAGGGAGTGAGCCGAT 60.467 60.000 0.00 0.00 0.00 4.18
90 91 0.032615 AGAGAGGGAGTGAGCCGATT 60.033 55.000 0.00 0.00 0.00 3.34
91 92 0.827368 GAGAGGGAGTGAGCCGATTT 59.173 55.000 0.00 0.00 0.00 2.17
92 93 0.539051 AGAGGGAGTGAGCCGATTTG 59.461 55.000 0.00 0.00 0.00 2.32
93 94 0.462759 GAGGGAGTGAGCCGATTTGG 60.463 60.000 0.00 0.00 42.50 3.28
94 95 1.452108 GGGAGTGAGCCGATTTGGG 60.452 63.158 0.00 0.00 38.63 4.12
95 96 1.452108 GGAGTGAGCCGATTTGGGG 60.452 63.158 0.00 0.00 38.63 4.96
96 97 1.452108 GAGTGAGCCGATTTGGGGG 60.452 63.158 0.00 0.00 38.63 5.40
110 111 4.796775 GGGGGAAATGGTGGGGGC 62.797 72.222 0.00 0.00 0.00 5.80
113 114 4.759205 GGAAATGGTGGGGGCGCT 62.759 66.667 7.64 0.00 0.00 5.92
114 115 3.451894 GAAATGGTGGGGGCGCTG 61.452 66.667 7.64 0.00 0.00 5.18
135 136 4.078516 CCGGTGGTCGTTCCCCTC 62.079 72.222 0.00 0.00 37.11 4.30
136 137 4.078516 CGGTGGTCGTTCCCCTCC 62.079 72.222 0.00 0.00 34.77 4.30
137 138 3.714001 GGTGGTCGTTCCCCTCCC 61.714 72.222 0.00 0.00 34.77 4.30
138 139 2.606826 GTGGTCGTTCCCCTCCCT 60.607 66.667 0.00 0.00 34.77 4.20
139 140 2.284405 TGGTCGTTCCCCTCCCTC 60.284 66.667 0.00 0.00 34.77 4.30
140 141 2.039137 GGTCGTTCCCCTCCCTCT 59.961 66.667 0.00 0.00 0.00 3.69
141 142 1.612739 GGTCGTTCCCCTCCCTCTT 60.613 63.158 0.00 0.00 0.00 2.85
142 143 1.199425 GGTCGTTCCCCTCCCTCTTT 61.199 60.000 0.00 0.00 0.00 2.52
143 144 1.565067 GTCGTTCCCCTCCCTCTTTA 58.435 55.000 0.00 0.00 0.00 1.85
144 145 2.117051 GTCGTTCCCCTCCCTCTTTAT 58.883 52.381 0.00 0.00 0.00 1.40
145 146 3.303049 GTCGTTCCCCTCCCTCTTTATA 58.697 50.000 0.00 0.00 0.00 0.98
146 147 3.708121 GTCGTTCCCCTCCCTCTTTATAA 59.292 47.826 0.00 0.00 0.00 0.98
147 148 3.965347 TCGTTCCCCTCCCTCTTTATAAG 59.035 47.826 0.00 0.00 0.00 1.73
148 149 3.965347 CGTTCCCCTCCCTCTTTATAAGA 59.035 47.826 0.00 0.00 35.87 2.10
149 150 4.593634 CGTTCCCCTCCCTCTTTATAAGAT 59.406 45.833 0.00 0.00 36.82 2.40
150 151 5.511545 CGTTCCCCTCCCTCTTTATAAGATG 60.512 48.000 0.00 0.00 36.82 2.90
151 152 5.171541 TCCCCTCCCTCTTTATAAGATGT 57.828 43.478 0.00 0.00 36.82 3.06
152 153 4.907875 TCCCCTCCCTCTTTATAAGATGTG 59.092 45.833 0.00 0.00 36.82 3.21
153 154 4.042187 CCCCTCCCTCTTTATAAGATGTGG 59.958 50.000 0.00 0.00 36.82 4.17
154 155 4.505742 CCCTCCCTCTTTATAAGATGTGGC 60.506 50.000 0.00 0.00 36.82 5.01
155 156 4.310769 CTCCCTCTTTATAAGATGTGGCG 58.689 47.826 0.00 0.00 36.82 5.69
156 157 3.709653 TCCCTCTTTATAAGATGTGGCGT 59.290 43.478 0.00 0.00 36.82 5.68
157 158 4.163458 TCCCTCTTTATAAGATGTGGCGTT 59.837 41.667 0.00 0.00 36.82 4.84
158 159 4.881850 CCCTCTTTATAAGATGTGGCGTTT 59.118 41.667 0.00 0.00 36.82 3.60
159 160 5.357032 CCCTCTTTATAAGATGTGGCGTTTT 59.643 40.000 0.00 0.00 36.82 2.43
160 161 6.127730 CCCTCTTTATAAGATGTGGCGTTTTT 60.128 38.462 0.00 0.00 36.82 1.94
161 162 6.747280 CCTCTTTATAAGATGTGGCGTTTTTG 59.253 38.462 0.00 0.00 36.82 2.44
162 163 6.616947 TCTTTATAAGATGTGGCGTTTTTGG 58.383 36.000 0.00 0.00 31.20 3.28
163 164 6.431543 TCTTTATAAGATGTGGCGTTTTTGGA 59.568 34.615 0.00 0.00 31.20 3.53
164 165 6.576662 TTATAAGATGTGGCGTTTTTGGAA 57.423 33.333 0.00 0.00 0.00 3.53
165 166 3.369546 AAGATGTGGCGTTTTTGGAAG 57.630 42.857 0.00 0.00 0.00 3.46
166 167 2.306847 AGATGTGGCGTTTTTGGAAGT 58.693 42.857 0.00 0.00 0.00 3.01
167 168 2.693074 AGATGTGGCGTTTTTGGAAGTT 59.307 40.909 0.00 0.00 0.00 2.66
168 169 3.132111 AGATGTGGCGTTTTTGGAAGTTT 59.868 39.130 0.00 0.00 0.00 2.66
169 170 3.320673 TGTGGCGTTTTTGGAAGTTTT 57.679 38.095 0.00 0.00 0.00 2.43
170 171 3.254892 TGTGGCGTTTTTGGAAGTTTTC 58.745 40.909 0.00 0.00 0.00 2.29
171 172 2.280445 GTGGCGTTTTTGGAAGTTTTCG 59.720 45.455 0.00 0.00 0.00 3.46
172 173 2.094649 TGGCGTTTTTGGAAGTTTTCGT 60.095 40.909 0.00 0.00 0.00 3.85
173 174 2.280445 GGCGTTTTTGGAAGTTTTCGTG 59.720 45.455 0.00 0.00 0.00 4.35
174 175 2.284798 GCGTTTTTGGAAGTTTTCGTGC 60.285 45.455 0.00 0.00 0.00 5.34
175 176 2.036086 CGTTTTTGGAAGTTTTCGTGCG 60.036 45.455 0.00 0.00 0.00 5.34
176 177 1.551145 TTTTGGAAGTTTTCGTGCGC 58.449 45.000 0.00 0.00 0.00 6.09
177 178 0.248702 TTTGGAAGTTTTCGTGCGCC 60.249 50.000 4.18 0.00 0.00 6.53
178 179 2.127383 GGAAGTTTTCGTGCGCCG 60.127 61.111 4.18 8.64 38.13 6.46
179 180 2.795389 GAAGTTTTCGTGCGCCGC 60.795 61.111 4.18 0.00 36.19 6.53
180 181 4.322385 AAGTTTTCGTGCGCCGCC 62.322 61.111 6.63 0.00 36.19 6.13
243 244 3.767230 CGCCGCACGTGACAAGAG 61.767 66.667 22.23 1.68 36.87 2.85
244 245 2.355837 GCCGCACGTGACAAGAGA 60.356 61.111 22.23 0.00 0.00 3.10
245 246 1.954146 GCCGCACGTGACAAGAGAA 60.954 57.895 22.23 0.00 0.00 2.87
246 247 1.495584 GCCGCACGTGACAAGAGAAA 61.496 55.000 22.23 0.00 0.00 2.52
247 248 0.934496 CCGCACGTGACAAGAGAAAA 59.066 50.000 22.23 0.00 0.00 2.29
248 249 1.332904 CCGCACGTGACAAGAGAAAAC 60.333 52.381 22.23 0.00 0.00 2.43
249 250 1.653679 CGCACGTGACAAGAGAAAACG 60.654 52.381 22.23 4.45 40.00 3.60
250 251 1.591158 GCACGTGACAAGAGAAAACGA 59.409 47.619 22.23 0.00 37.66 3.85
251 252 2.029970 GCACGTGACAAGAGAAAACGAA 59.970 45.455 22.23 0.00 37.66 3.85
252 253 3.303132 GCACGTGACAAGAGAAAACGAAT 60.303 43.478 22.23 0.00 37.66 3.34
253 254 4.446234 CACGTGACAAGAGAAAACGAATC 58.554 43.478 10.90 0.00 37.66 2.52
254 255 3.181774 ACGTGACAAGAGAAAACGAATCG 59.818 43.478 0.00 0.00 37.66 3.34
255 256 3.470562 GTGACAAGAGAAAACGAATCGC 58.529 45.455 1.15 0.00 0.00 4.58
256 257 2.478894 TGACAAGAGAAAACGAATCGCC 59.521 45.455 1.15 0.00 0.00 5.54
257 258 1.804748 ACAAGAGAAAACGAATCGCCC 59.195 47.619 1.15 0.00 0.00 6.13
258 259 1.804151 CAAGAGAAAACGAATCGCCCA 59.196 47.619 1.15 0.00 0.00 5.36
259 260 1.439679 AGAGAAAACGAATCGCCCAC 58.560 50.000 1.15 0.00 0.00 4.61
260 261 0.094730 GAGAAAACGAATCGCCCACG 59.905 55.000 1.15 0.00 42.01 4.94
261 262 0.601841 AGAAAACGAATCGCCCACGT 60.602 50.000 1.15 0.00 41.97 4.49
262 263 1.070038 GAAAACGAATCGCCCACGTA 58.930 50.000 1.15 0.00 39.31 3.57
263 264 0.792031 AAAACGAATCGCCCACGTAC 59.208 50.000 1.15 0.00 39.31 3.67
264 265 0.319727 AAACGAATCGCCCACGTACA 60.320 50.000 1.15 0.00 39.31 2.90
265 266 0.319727 AACGAATCGCCCACGTACAA 60.320 50.000 1.15 0.00 39.31 2.41
266 267 0.108520 ACGAATCGCCCACGTACAAT 60.109 50.000 1.15 0.00 41.18 2.71
267 268 1.134753 ACGAATCGCCCACGTACAATA 59.865 47.619 1.15 0.00 41.18 1.90
268 269 1.519758 CGAATCGCCCACGTACAATAC 59.480 52.381 0.00 0.00 41.18 1.89
269 270 2.542597 GAATCGCCCACGTACAATACA 58.457 47.619 0.00 0.00 41.18 2.29
270 271 2.902705 ATCGCCCACGTACAATACAT 57.097 45.000 0.00 0.00 41.18 2.29
271 272 1.929230 TCGCCCACGTACAATACATG 58.071 50.000 0.00 0.00 41.18 3.21
272 273 1.205179 TCGCCCACGTACAATACATGT 59.795 47.619 2.69 2.69 41.39 3.21
273 274 2.426381 TCGCCCACGTACAATACATGTA 59.574 45.455 8.27 8.27 39.74 2.29
274 275 3.068448 TCGCCCACGTACAATACATGTAT 59.932 43.478 12.75 12.75 45.87 2.29
275 276 4.277921 TCGCCCACGTACAATACATGTATA 59.722 41.667 18.56 0.63 45.87 1.47
276 277 4.383649 CGCCCACGTACAATACATGTATAC 59.616 45.833 18.56 12.12 45.87 1.47
277 278 4.687483 GCCCACGTACAATACATGTATACC 59.313 45.833 18.56 6.39 45.87 2.73
278 279 5.232463 CCCACGTACAATACATGTATACCC 58.768 45.833 18.56 6.71 45.87 3.69
279 280 5.232463 CCACGTACAATACATGTATACCCC 58.768 45.833 18.56 7.03 45.87 4.95
280 281 5.232463 CACGTACAATACATGTATACCCCC 58.768 45.833 18.56 5.76 45.87 5.40
281 282 4.900652 ACGTACAATACATGTATACCCCCA 59.099 41.667 18.56 0.00 45.87 4.96
282 283 5.011329 ACGTACAATACATGTATACCCCCAG 59.989 44.000 18.56 9.64 45.87 4.45
283 284 5.011329 CGTACAATACATGTATACCCCCAGT 59.989 44.000 18.56 10.71 45.87 4.00
284 285 5.304686 ACAATACATGTATACCCCCAGTG 57.695 43.478 18.56 12.46 41.63 3.66
285 286 4.724798 ACAATACATGTATACCCCCAGTGT 59.275 41.667 18.56 13.05 41.63 3.55
286 287 5.906495 ACAATACATGTATACCCCCAGTGTA 59.094 40.000 18.56 1.56 41.63 2.90
287 288 6.183361 ACAATACATGTATACCCCCAGTGTAC 60.183 42.308 18.56 0.00 41.63 2.90
292 293 5.168647 TGTATACCCCCAGTGTACAAAAG 57.831 43.478 0.00 0.00 46.41 2.27
293 294 4.598373 TGTATACCCCCAGTGTACAAAAGT 59.402 41.667 0.00 0.00 46.41 2.66
294 295 5.784390 TGTATACCCCCAGTGTACAAAAGTA 59.216 40.000 0.00 0.00 46.41 2.24
295 296 5.846528 ATACCCCCAGTGTACAAAAGTAA 57.153 39.130 0.00 0.00 0.00 2.24
296 297 4.734843 ACCCCCAGTGTACAAAAGTAAT 57.265 40.909 0.00 0.00 0.00 1.89
297 298 4.659115 ACCCCCAGTGTACAAAAGTAATC 58.341 43.478 0.00 0.00 0.00 1.75
298 299 3.687698 CCCCCAGTGTACAAAAGTAATCG 59.312 47.826 0.00 0.00 0.00 3.34
299 300 3.687698 CCCCAGTGTACAAAAGTAATCGG 59.312 47.826 0.00 0.00 0.00 4.18
300 301 3.687698 CCCAGTGTACAAAAGTAATCGGG 59.312 47.826 0.00 0.00 0.00 5.14
301 302 3.126343 CCAGTGTACAAAAGTAATCGGGC 59.874 47.826 0.00 0.00 0.00 6.13
302 303 3.126343 CAGTGTACAAAAGTAATCGGGCC 59.874 47.826 0.00 0.00 0.00 5.80
303 304 2.094734 GTGTACAAAAGTAATCGGGCCG 59.905 50.000 22.51 22.51 0.00 6.13
304 305 1.667212 GTACAAAAGTAATCGGGCCGG 59.333 52.381 27.98 8.91 0.00 6.13
305 306 0.037160 ACAAAAGTAATCGGGCCGGT 59.963 50.000 27.98 18.59 0.00 5.28
306 307 0.450184 CAAAAGTAATCGGGCCGGTG 59.550 55.000 27.98 0.00 0.00 4.94
307 308 1.310216 AAAAGTAATCGGGCCGGTGC 61.310 55.000 27.98 17.65 0.00 5.01
308 309 4.524318 AGTAATCGGGCCGGTGCG 62.524 66.667 27.98 0.94 38.85 5.34
318 319 4.690719 CCGGTGCGGGCTTGTACA 62.691 66.667 0.00 0.00 44.15 2.90
319 320 3.118454 CGGTGCGGGCTTGTACAG 61.118 66.667 0.00 0.00 0.00 2.74
320 321 2.746277 GGTGCGGGCTTGTACAGG 60.746 66.667 0.00 0.00 0.00 4.00
321 322 2.746277 GTGCGGGCTTGTACAGGG 60.746 66.667 7.15 0.51 0.00 4.45
322 323 4.715523 TGCGGGCTTGTACAGGGC 62.716 66.667 21.57 21.57 0.00 5.19
323 324 4.410400 GCGGGCTTGTACAGGGCT 62.410 66.667 26.97 0.00 33.43 5.19
324 325 2.436646 CGGGCTTGTACAGGGCTG 60.437 66.667 26.97 25.06 33.43 4.85
325 326 2.757077 GGGCTTGTACAGGGCTGT 59.243 61.111 26.97 0.00 46.87 4.40
326 327 1.895020 CGGGCTTGTACAGGGCTGTA 61.895 60.000 26.50 0.00 44.42 2.74
349 350 2.203015 GCTCTCCGCGGGCATAAA 60.203 61.111 27.83 2.94 0.00 1.40
350 351 1.817941 GCTCTCCGCGGGCATAAAA 60.818 57.895 27.83 2.05 0.00 1.52
351 352 1.373590 GCTCTCCGCGGGCATAAAAA 61.374 55.000 27.83 1.15 0.00 1.94
352 353 0.657840 CTCTCCGCGGGCATAAAAAG 59.342 55.000 27.83 12.89 0.00 2.27
353 354 0.250793 TCTCCGCGGGCATAAAAAGA 59.749 50.000 27.83 15.29 0.00 2.52
354 355 0.377203 CTCCGCGGGCATAAAAAGAC 59.623 55.000 27.83 0.00 0.00 3.01
355 356 1.061887 CCGCGGGCATAAAAAGACG 59.938 57.895 20.10 0.00 0.00 4.18
356 357 1.363145 CCGCGGGCATAAAAAGACGA 61.363 55.000 20.10 0.00 0.00 4.20
357 358 0.655733 CGCGGGCATAAAAAGACGAT 59.344 50.000 0.00 0.00 0.00 3.73
358 359 1.332904 CGCGGGCATAAAAAGACGATC 60.333 52.381 0.00 0.00 0.00 3.69
359 360 1.332904 GCGGGCATAAAAAGACGATCG 60.333 52.381 14.88 14.88 0.00 3.69
360 361 1.931172 CGGGCATAAAAAGACGATCGT 59.069 47.619 22.97 22.97 0.00 3.73
361 362 2.285602 CGGGCATAAAAAGACGATCGTG 60.286 50.000 28.12 9.69 0.00 4.35
362 363 2.538939 GGGCATAAAAAGACGATCGTGC 60.539 50.000 28.12 19.19 0.00 5.34
363 364 2.538939 GGCATAAAAAGACGATCGTGCC 60.539 50.000 28.12 24.07 43.29 5.01
364 365 2.538939 GCATAAAAAGACGATCGTGCCC 60.539 50.000 28.12 11.69 0.00 5.36
365 366 1.729284 TAAAAAGACGATCGTGCCCC 58.271 50.000 28.12 11.29 0.00 5.80
366 367 0.036306 AAAAAGACGATCGTGCCCCT 59.964 50.000 28.12 13.68 0.00 4.79
367 368 0.391263 AAAAGACGATCGTGCCCCTC 60.391 55.000 28.12 10.05 0.00 4.30
368 369 1.258445 AAAGACGATCGTGCCCCTCT 61.258 55.000 28.12 12.46 0.00 3.69
369 370 1.258445 AAGACGATCGTGCCCCTCTT 61.258 55.000 28.12 17.91 0.00 2.85
370 371 1.227002 GACGATCGTGCCCCTCTTC 60.227 63.158 28.12 3.50 0.00 2.87
371 372 1.945354 GACGATCGTGCCCCTCTTCA 61.945 60.000 28.12 0.00 0.00 3.02
372 373 1.519455 CGATCGTGCCCCTCTTCAC 60.519 63.158 7.03 0.00 0.00 3.18
377 378 2.768834 GTGCCCCTCTTCACGAATC 58.231 57.895 0.00 0.00 0.00 2.52
378 379 1.084370 GTGCCCCTCTTCACGAATCG 61.084 60.000 0.00 0.00 0.00 3.34
379 380 1.218316 GCCCCTCTTCACGAATCGT 59.782 57.895 0.96 0.96 42.36 3.73
380 381 0.391263 GCCCCTCTTCACGAATCGTT 60.391 55.000 5.20 0.00 38.32 3.85
381 382 1.944430 GCCCCTCTTCACGAATCGTTT 60.944 52.381 5.20 0.00 38.32 3.60
382 383 2.423577 CCCCTCTTCACGAATCGTTTT 58.576 47.619 5.20 0.00 38.32 2.43
383 384 2.812011 CCCCTCTTCACGAATCGTTTTT 59.188 45.455 5.20 0.00 38.32 1.94
384 385 3.364964 CCCCTCTTCACGAATCGTTTTTG 60.365 47.826 5.20 0.00 38.32 2.44
385 386 3.496884 CCCTCTTCACGAATCGTTTTTGA 59.503 43.478 5.20 0.00 38.32 2.69
386 387 4.455124 CCTCTTCACGAATCGTTTTTGAC 58.545 43.478 5.20 0.00 38.32 3.18
387 388 4.025229 CCTCTTCACGAATCGTTTTTGACA 60.025 41.667 5.20 0.00 38.32 3.58
388 389 5.078153 TCTTCACGAATCGTTTTTGACAG 57.922 39.130 5.20 1.99 38.32 3.51
389 390 4.806775 TCTTCACGAATCGTTTTTGACAGA 59.193 37.500 5.20 4.14 38.32 3.41
390 391 5.465390 TCTTCACGAATCGTTTTTGACAGAT 59.535 36.000 5.20 0.00 38.32 2.90
391 392 5.264060 TCACGAATCGTTTTTGACAGATC 57.736 39.130 5.20 0.00 38.32 2.75
392 393 4.988540 TCACGAATCGTTTTTGACAGATCT 59.011 37.500 5.20 0.00 38.32 2.75
393 394 5.118664 TCACGAATCGTTTTTGACAGATCTC 59.881 40.000 5.20 0.00 38.32 2.75
394 395 4.988540 ACGAATCGTTTTTGACAGATCTCA 59.011 37.500 0.96 0.00 36.35 3.27
395 396 5.119279 ACGAATCGTTTTTGACAGATCTCAG 59.881 40.000 0.96 0.00 36.35 3.35
396 397 4.935885 ATCGTTTTTGACAGATCTCAGC 57.064 40.909 0.00 0.00 0.00 4.26
397 398 3.067106 TCGTTTTTGACAGATCTCAGCC 58.933 45.455 0.00 0.00 0.00 4.85
398 399 2.159787 CGTTTTTGACAGATCTCAGCCG 60.160 50.000 0.00 0.00 0.00 5.52
399 400 2.808543 GTTTTTGACAGATCTCAGCCGT 59.191 45.455 0.00 0.00 0.00 5.68
400 401 2.370281 TTTGACAGATCTCAGCCGTC 57.630 50.000 0.00 0.00 0.00 4.79
401 402 0.532573 TTGACAGATCTCAGCCGTCC 59.467 55.000 7.47 0.00 0.00 4.79
402 403 0.323816 TGACAGATCTCAGCCGTCCT 60.324 55.000 7.47 0.00 0.00 3.85
403 404 0.820871 GACAGATCTCAGCCGTCCTT 59.179 55.000 0.00 0.00 0.00 3.36
404 405 0.534412 ACAGATCTCAGCCGTCCTTG 59.466 55.000 0.00 0.00 0.00 3.61
405 406 0.534412 CAGATCTCAGCCGTCCTTGT 59.466 55.000 0.00 0.00 0.00 3.16
406 407 0.534412 AGATCTCAGCCGTCCTTGTG 59.466 55.000 0.00 0.00 0.00 3.33
407 408 0.247736 GATCTCAGCCGTCCTTGTGT 59.752 55.000 0.00 0.00 0.00 3.72
408 409 0.687354 ATCTCAGCCGTCCTTGTGTT 59.313 50.000 0.00 0.00 0.00 3.32
409 410 0.468226 TCTCAGCCGTCCTTGTGTTT 59.532 50.000 0.00 0.00 0.00 2.83
410 411 0.868406 CTCAGCCGTCCTTGTGTTTC 59.132 55.000 0.00 0.00 0.00 2.78
411 412 0.468226 TCAGCCGTCCTTGTGTTTCT 59.532 50.000 0.00 0.00 0.00 2.52
412 413 0.868406 CAGCCGTCCTTGTGTTTCTC 59.132 55.000 0.00 0.00 0.00 2.87
413 414 0.250338 AGCCGTCCTTGTGTTTCTCC 60.250 55.000 0.00 0.00 0.00 3.71
414 415 1.235281 GCCGTCCTTGTGTTTCTCCC 61.235 60.000 0.00 0.00 0.00 4.30
415 416 0.605589 CCGTCCTTGTGTTTCTCCCC 60.606 60.000 0.00 0.00 0.00 4.81
416 417 0.605589 CGTCCTTGTGTTTCTCCCCC 60.606 60.000 0.00 0.00 0.00 5.40
417 418 0.771755 GTCCTTGTGTTTCTCCCCCT 59.228 55.000 0.00 0.00 0.00 4.79
418 419 1.064825 TCCTTGTGTTTCTCCCCCTC 58.935 55.000 0.00 0.00 0.00 4.30
419 420 0.321653 CCTTGTGTTTCTCCCCCTCG 60.322 60.000 0.00 0.00 0.00 4.63
420 421 0.955919 CTTGTGTTTCTCCCCCTCGC 60.956 60.000 0.00 0.00 0.00 5.03
421 422 2.434359 GTGTTTCTCCCCCTCGCG 60.434 66.667 0.00 0.00 0.00 5.87
422 423 2.920912 TGTTTCTCCCCCTCGCGT 60.921 61.111 5.77 0.00 0.00 6.01
423 424 2.346365 GTTTCTCCCCCTCGCGTT 59.654 61.111 5.77 0.00 0.00 4.84
424 425 1.740664 GTTTCTCCCCCTCGCGTTC 60.741 63.158 5.77 0.00 0.00 3.95
425 426 2.211410 TTTCTCCCCCTCGCGTTCA 61.211 57.895 5.77 0.00 0.00 3.18
426 427 2.167398 TTTCTCCCCCTCGCGTTCAG 62.167 60.000 5.77 0.00 0.00 3.02
427 428 4.821589 CTCCCCCTCGCGTTCAGC 62.822 72.222 5.77 0.00 43.95 4.26
494 495 4.137543 ACAACCTGTTGACTGGAGAAATC 58.862 43.478 16.41 0.00 42.93 2.17
655 656 3.778954 AGTTCCAGACTTCTTTGAGGG 57.221 47.619 0.00 0.00 33.92 4.30
698 699 7.815840 TCTCAATTTGTCATTCAACAACCTA 57.184 32.000 0.00 0.00 38.80 3.08
701 702 8.408043 TCAATTTGTCATTCAACAACCTAGAT 57.592 30.769 0.00 0.00 38.80 1.98
783 784 1.299926 GAGTTGTGTGCCGTCTCGT 60.300 57.895 0.00 0.00 0.00 4.18
786 787 1.142097 TTGTGTGCCGTCTCGTCAA 59.858 52.632 0.00 0.00 0.00 3.18
812 813 0.664166 GATTGCCACTTTGCCACACG 60.664 55.000 0.00 0.00 0.00 4.49
830 834 1.680735 ACGGCTGCATCTCAACAAAAA 59.319 42.857 0.50 0.00 0.00 1.94
847 851 5.280945 ACAAAAACACAGATTCCACATTCG 58.719 37.500 0.00 0.00 0.00 3.34
909 913 9.474920 TGTTATCATGTTTTGGAGTCATTTTTC 57.525 29.630 0.00 0.00 0.00 2.29
1027 1031 4.706842 TCTCTCTTAGCCAACTTGGTTT 57.293 40.909 9.63 1.50 40.46 3.27
1046 1050 4.022329 GGTTTGTTCAGGAAAGTATGGGTG 60.022 45.833 0.00 0.00 0.00 4.61
1058 1062 4.967084 AGTATGGGTGTGTGTACAAAGA 57.033 40.909 0.00 0.00 38.82 2.52
1121 1128 2.089980 CAAACTTGATCAGCCTGGAGG 58.910 52.381 0.00 0.00 38.53 4.30
1137 1144 2.289444 TGGAGGGACTAAAAGCTTCGTG 60.289 50.000 0.00 0.00 41.55 4.35
1179 1186 5.003872 CAGAAACACTCGTCATCGTAATCTG 59.996 44.000 0.00 0.00 38.33 2.90
1362 1374 6.234177 AGCAATAATAGTGGACATAGAAGCC 58.766 40.000 0.00 0.00 0.00 4.35
1636 2406 8.270080 AGGCTCTATGAAAAAGTAACTTTAGC 57.730 34.615 0.00 0.00 31.99 3.09
2032 2901 2.743928 GCTGCGGAGACACCCAAG 60.744 66.667 8.65 0.00 34.64 3.61
2038 2907 0.102481 CGGAGACACCCAAGTATCGG 59.898 60.000 0.00 0.00 30.71 4.18
2122 2992 2.737252 GGGTTGAGCAAAAGTAGAGTCG 59.263 50.000 0.00 0.00 0.00 4.18
2137 3557 6.688578 AGTAGAGTCGTTTTCTATTGCTCAA 58.311 36.000 0.00 0.00 30.45 3.02
2226 3649 4.386867 AATCGTGTTATGTCGTGGATCT 57.613 40.909 0.00 0.00 0.00 2.75
2232 3655 4.265556 GTGTTATGTCGTGGATCTTCTTCG 59.734 45.833 0.00 0.00 0.00 3.79
2330 3754 5.446741 CGTGAACTTTTCTTTCGACTTGGAA 60.447 40.000 0.00 0.00 0.00 3.53
2389 3909 4.201920 GCAAGTACTTAAGCCCAACTATGC 60.202 45.833 8.04 0.00 0.00 3.14
2396 3916 5.590259 ACTTAAGCCCAACTATGCACTAATG 59.410 40.000 1.29 0.00 0.00 1.90
2433 3953 4.937620 AGATAACTTGCACAGTGGTACATG 59.062 41.667 1.84 0.00 44.52 3.21
2468 3992 2.223688 TGAAAGTTGAAACCCATGTGCG 60.224 45.455 0.00 0.00 0.00 5.34
2483 4007 4.996758 CCATGTGCGAGGATATCACATTTA 59.003 41.667 4.83 0.00 45.86 1.40
2484 4008 5.645067 CCATGTGCGAGGATATCACATTTAT 59.355 40.000 4.83 0.00 45.86 1.40
2538 4065 2.281208 CTTGACGGACGCCCCAAA 60.281 61.111 0.00 0.00 34.14 3.28
2551 4078 4.093952 CCAAAGACGCCTGCGCAG 62.094 66.667 30.52 30.52 44.19 5.18
2568 4095 2.219875 AGTGGAGCACAGGGAGGTG 61.220 63.158 0.00 0.00 41.72 4.00
2609 4136 2.421952 GGATTCCAGCTGCCACTGAATA 60.422 50.000 8.66 0.00 40.25 1.75
2619 4146 0.806102 CCACTGAATACCTCGGCGTG 60.806 60.000 6.85 3.87 33.14 5.34
2683 4210 1.522580 GAGGAGGATGCGCTTCCAC 60.523 63.158 35.52 30.37 44.89 4.02
2694 4221 4.047834 CTTCCACAGCAACGCAGA 57.952 55.556 0.00 0.00 0.00 4.26
2710 4237 2.267324 GAGGTGTCCTGCAGGAGC 59.733 66.667 35.92 28.18 46.49 4.70
2723 4250 0.817654 CAGGAGCTCGGTGTGTATGA 59.182 55.000 7.83 0.00 0.00 2.15
2724 4251 1.107114 AGGAGCTCGGTGTGTATGAG 58.893 55.000 7.83 0.00 0.00 2.90
2729 4256 1.645034 CTCGGTGTGTATGAGCAAGG 58.355 55.000 0.00 0.00 0.00 3.61
2730 4257 0.973632 TCGGTGTGTATGAGCAAGGT 59.026 50.000 0.00 0.00 0.00 3.50
2731 4258 1.078709 CGGTGTGTATGAGCAAGGTG 58.921 55.000 0.00 0.00 0.00 4.00
2732 4259 1.608025 CGGTGTGTATGAGCAAGGTGT 60.608 52.381 0.00 0.00 0.00 4.16
2733 4260 2.353307 CGGTGTGTATGAGCAAGGTGTA 60.353 50.000 0.00 0.00 0.00 2.90
2734 4261 3.678806 CGGTGTGTATGAGCAAGGTGTAT 60.679 47.826 0.00 0.00 0.00 2.29
2735 4262 3.623060 GGTGTGTATGAGCAAGGTGTATG 59.377 47.826 0.00 0.00 0.00 2.39
2742 4269 0.539986 AGCAAGGTGTATGTACCCCG 59.460 55.000 0.00 0.00 41.83 5.73
2748 4275 0.810648 GTGTATGTACCCCGTCACGA 59.189 55.000 0.00 0.00 0.00 4.35
2749 4276 1.097232 TGTATGTACCCCGTCACGAG 58.903 55.000 0.00 0.00 0.00 4.18
2754 4281 2.334946 TACCCCGTCACGAGGTTCG 61.335 63.158 9.39 0.00 46.93 3.95
2813 4349 2.997315 TGGTGGAGGAGTCTGCCG 60.997 66.667 0.00 0.00 0.00 5.69
2815 4351 4.803426 GTGGAGGAGTCTGCCGCG 62.803 72.222 0.00 0.00 0.00 6.46
2819 4355 3.691744 GAGGAGTCTGCCGCGTCTG 62.692 68.421 4.92 0.00 0.00 3.51
2845 4381 1.565759 CTCCTGGAATCACCCCAATCA 59.434 52.381 0.00 0.00 38.00 2.57
2849 4385 3.499202 CCTGGAATCACCCCAATCATAGG 60.499 52.174 0.00 0.00 38.00 2.57
2850 4386 2.158475 TGGAATCACCCCAATCATAGGC 60.158 50.000 0.00 0.00 38.00 3.93
2922 4458 1.339824 CCATAGATCCCAGCCAGATGC 60.340 57.143 0.00 0.00 41.71 3.91
2943 4479 4.509737 GCGGCGTCCCTACCAGAC 62.510 72.222 9.37 0.00 0.00 3.51
2944 4480 3.834799 CGGCGTCCCTACCAGACC 61.835 72.222 0.00 0.00 0.00 3.85
2945 4481 2.363925 GGCGTCCCTACCAGACCT 60.364 66.667 0.00 0.00 0.00 3.85
2946 4482 2.424733 GGCGTCCCTACCAGACCTC 61.425 68.421 0.00 0.00 0.00 3.85
2947 4483 1.681327 GCGTCCCTACCAGACCTCA 60.681 63.158 0.00 0.00 0.00 3.86
2948 4484 1.043673 GCGTCCCTACCAGACCTCAT 61.044 60.000 0.00 0.00 0.00 2.90
2949 4485 1.033574 CGTCCCTACCAGACCTCATC 58.966 60.000 0.00 0.00 0.00 2.92
2950 4486 1.685180 CGTCCCTACCAGACCTCATCA 60.685 57.143 0.00 0.00 0.00 3.07
2951 4487 2.035632 GTCCCTACCAGACCTCATCAG 58.964 57.143 0.00 0.00 0.00 2.90
2952 4488 1.930204 TCCCTACCAGACCTCATCAGA 59.070 52.381 0.00 0.00 0.00 3.27
2953 4489 2.035632 CCCTACCAGACCTCATCAGAC 58.964 57.143 0.00 0.00 0.00 3.51
2954 4490 2.035632 CCTACCAGACCTCATCAGACC 58.964 57.143 0.00 0.00 0.00 3.85
2955 4491 2.035632 CTACCAGACCTCATCAGACCC 58.964 57.143 0.00 0.00 0.00 4.46
2956 4492 0.972983 ACCAGACCTCATCAGACCCG 60.973 60.000 0.00 0.00 0.00 5.28
2957 4493 1.680522 CCAGACCTCATCAGACCCGG 61.681 65.000 0.00 0.00 0.00 5.73
2958 4494 0.684479 CAGACCTCATCAGACCCGGA 60.684 60.000 0.73 0.00 0.00 5.14
2959 4495 0.396417 AGACCTCATCAGACCCGGAG 60.396 60.000 0.73 0.00 0.00 4.63
2960 4496 2.022240 GACCTCATCAGACCCGGAGC 62.022 65.000 0.73 0.00 0.00 4.70
2961 4497 2.801631 CCTCATCAGACCCGGAGCC 61.802 68.421 0.73 0.00 0.00 4.70
2962 4498 2.038813 TCATCAGACCCGGAGCCA 59.961 61.111 0.73 0.00 0.00 4.75
2963 4499 1.612146 TCATCAGACCCGGAGCCAA 60.612 57.895 0.73 0.00 0.00 4.52
2964 4500 1.153289 CATCAGACCCGGAGCCAAG 60.153 63.158 0.73 0.00 0.00 3.61
2965 4501 1.306141 ATCAGACCCGGAGCCAAGA 60.306 57.895 0.73 0.00 0.00 3.02
2966 4502 1.333636 ATCAGACCCGGAGCCAAGAG 61.334 60.000 0.73 0.00 0.00 2.85
2967 4503 2.120718 AGACCCGGAGCCAAGAGT 59.879 61.111 0.73 0.00 0.00 3.24
2968 4504 2.266055 GACCCGGAGCCAAGAGTG 59.734 66.667 0.73 0.00 0.00 3.51
2969 4505 2.203788 ACCCGGAGCCAAGAGTGA 60.204 61.111 0.73 0.00 0.00 3.41
2970 4506 2.266055 CCCGGAGCCAAGAGTGAC 59.734 66.667 0.73 0.00 0.00 3.67
2971 4507 2.266055 CCGGAGCCAAGAGTGACC 59.734 66.667 0.00 0.00 0.00 4.02
2972 4508 2.125912 CGGAGCCAAGAGTGACCG 60.126 66.667 0.00 0.00 32.72 4.79
2973 4509 2.266055 GGAGCCAAGAGTGACCGG 59.734 66.667 0.00 0.00 0.00 5.28
2974 4510 2.283529 GGAGCCAAGAGTGACCGGA 61.284 63.158 9.46 0.00 0.00 5.14
2975 4511 1.671742 GAGCCAAGAGTGACCGGAA 59.328 57.895 9.46 0.00 0.00 4.30
2976 4512 0.250513 GAGCCAAGAGTGACCGGAAT 59.749 55.000 9.46 0.00 0.00 3.01
2977 4513 0.036010 AGCCAAGAGTGACCGGAATG 60.036 55.000 9.46 0.00 0.00 2.67
2978 4514 0.321653 GCCAAGAGTGACCGGAATGT 60.322 55.000 9.46 0.00 0.00 2.71
2979 4515 1.726853 CCAAGAGTGACCGGAATGTC 58.273 55.000 9.46 0.00 35.77 3.06
2980 4516 1.001974 CCAAGAGTGACCGGAATGTCA 59.998 52.381 9.46 0.00 42.75 3.58
2981 4517 2.549992 CCAAGAGTGACCGGAATGTCAA 60.550 50.000 9.46 0.00 46.17 3.18
2982 4518 3.138304 CAAGAGTGACCGGAATGTCAAA 58.862 45.455 9.46 0.00 46.17 2.69
2983 4519 3.703001 AGAGTGACCGGAATGTCAAAT 57.297 42.857 9.46 0.00 46.17 2.32
2984 4520 4.021102 AGAGTGACCGGAATGTCAAATT 57.979 40.909 9.46 0.00 46.17 1.82
2985 4521 4.003648 AGAGTGACCGGAATGTCAAATTC 58.996 43.478 9.46 0.44 46.17 2.17
2986 4522 3.081804 AGTGACCGGAATGTCAAATTCC 58.918 45.455 9.46 0.00 46.17 3.01
2987 4523 2.817258 GTGACCGGAATGTCAAATTCCA 59.183 45.455 9.46 0.00 46.17 3.53
2988 4524 3.443681 GTGACCGGAATGTCAAATTCCAT 59.556 43.478 9.46 0.00 46.17 3.41
2989 4525 3.694072 TGACCGGAATGTCAAATTCCATC 59.306 43.478 9.46 4.40 45.97 3.51
2990 4526 3.023832 ACCGGAATGTCAAATTCCATCC 58.976 45.455 9.46 0.00 45.97 3.51
2991 4527 2.033299 CCGGAATGTCAAATTCCATCCG 59.967 50.000 7.42 4.42 45.97 4.18
2992 4528 2.033299 CGGAATGTCAAATTCCATCCGG 59.967 50.000 7.42 0.00 45.97 5.14
2993 4529 3.287222 GGAATGTCAAATTCCATCCGGA 58.713 45.455 6.61 6.61 45.21 5.14
3001 4537 2.404459 TTCCATCCGGAATTGGGGT 58.596 52.632 21.42 0.00 46.79 4.95
3002 4538 0.033601 TTCCATCCGGAATTGGGGTG 60.034 55.000 21.42 8.01 46.79 4.61
3003 4539 4.258206 CATCCGGAATTGGGGTGG 57.742 61.111 9.01 0.00 31.79 4.61
3004 4540 2.127232 CATCCGGAATTGGGGTGGC 61.127 63.158 9.01 0.00 31.79 5.01
3005 4541 3.714487 ATCCGGAATTGGGGTGGCG 62.714 63.158 9.01 0.00 0.00 5.69
3007 4543 4.418328 CGGAATTGGGGTGGCGGA 62.418 66.667 0.00 0.00 0.00 5.54
3008 4544 2.036572 GGAATTGGGGTGGCGGAA 59.963 61.111 0.00 0.00 0.00 4.30
3009 4545 2.052104 GGAATTGGGGTGGCGGAAG 61.052 63.158 0.00 0.00 0.00 3.46
3010 4546 1.304134 GAATTGGGGTGGCGGAAGT 60.304 57.895 0.00 0.00 0.00 3.01
3011 4547 1.304134 AATTGGGGTGGCGGAAGTC 60.304 57.895 0.00 0.00 0.00 3.01
3012 4548 3.622060 ATTGGGGTGGCGGAAGTCG 62.622 63.158 0.00 0.00 39.79 4.18
3015 4551 4.452733 GGGTGGCGGAAGTCGGAG 62.453 72.222 0.00 0.00 39.79 4.63
3017 4553 4.373116 GTGGCGGAAGTCGGAGCA 62.373 66.667 0.00 0.00 39.79 4.26
3018 4554 4.069232 TGGCGGAAGTCGGAGCAG 62.069 66.667 0.00 0.00 39.79 4.24
3019 4555 4.070552 GGCGGAAGTCGGAGCAGT 62.071 66.667 0.00 0.00 39.69 4.40
3020 4556 2.811317 GCGGAAGTCGGAGCAGTG 60.811 66.667 0.00 0.00 39.69 3.66
3021 4557 2.811317 CGGAAGTCGGAGCAGTGC 60.811 66.667 7.13 7.13 34.75 4.40
3022 4558 2.343758 GGAAGTCGGAGCAGTGCA 59.656 61.111 19.20 0.00 0.00 4.57
3023 4559 1.301716 GGAAGTCGGAGCAGTGCAA 60.302 57.895 19.20 0.00 0.00 4.08
3024 4560 1.294659 GGAAGTCGGAGCAGTGCAAG 61.295 60.000 19.20 8.02 0.00 4.01
3025 4561 0.319900 GAAGTCGGAGCAGTGCAAGA 60.320 55.000 19.20 10.40 0.00 3.02
3026 4562 0.320247 AAGTCGGAGCAGTGCAAGAG 60.320 55.000 19.20 5.73 0.00 2.85
3027 4563 1.739562 GTCGGAGCAGTGCAAGAGG 60.740 63.158 19.20 1.57 0.00 3.69
3028 4564 2.210013 TCGGAGCAGTGCAAGAGGT 61.210 57.895 19.20 0.00 0.00 3.85
3029 4565 1.302033 CGGAGCAGTGCAAGAGGTT 60.302 57.895 19.20 0.00 0.00 3.50
3030 4566 0.886490 CGGAGCAGTGCAAGAGGTTT 60.886 55.000 19.20 0.00 0.00 3.27
3031 4567 1.322442 GGAGCAGTGCAAGAGGTTTT 58.678 50.000 19.20 0.00 0.00 2.43
3032 4568 1.683385 GGAGCAGTGCAAGAGGTTTTT 59.317 47.619 19.20 0.00 0.00 1.94
3057 4593 7.548196 TTTATTTACTAGAACAATGCCTCGG 57.452 36.000 0.00 0.00 0.00 4.63
3058 4594 4.546829 TTTACTAGAACAATGCCTCGGT 57.453 40.909 0.00 0.00 0.00 4.69
3059 4595 4.546829 TTACTAGAACAATGCCTCGGTT 57.453 40.909 0.00 0.00 0.00 4.44
3060 4596 2.699954 ACTAGAACAATGCCTCGGTTG 58.300 47.619 0.00 0.00 0.00 3.77
3061 4597 1.398390 CTAGAACAATGCCTCGGTTGC 59.602 52.381 0.00 0.00 0.00 4.17
3062 4598 0.537143 AGAACAATGCCTCGGTTGCA 60.537 50.000 0.00 0.00 43.97 4.08
3063 4599 0.313672 GAACAATGCCTCGGTTGCAA 59.686 50.000 0.00 0.00 42.92 4.08
3064 4600 0.031994 AACAATGCCTCGGTTGCAAC 59.968 50.000 21.59 21.59 42.92 4.17
3065 4601 1.442520 CAATGCCTCGGTTGCAACG 60.443 57.895 22.67 17.36 42.92 4.10
3066 4602 2.625823 AATGCCTCGGTTGCAACGG 61.626 57.895 26.31 26.31 42.92 4.44
3069 4605 2.046314 CCTCGGTTGCAACGGGAT 60.046 61.111 29.81 0.00 32.46 3.85
3070 4606 1.219664 CCTCGGTTGCAACGGGATA 59.780 57.895 29.81 14.84 32.46 2.59
3071 4607 0.179056 CCTCGGTTGCAACGGGATAT 60.179 55.000 29.81 0.00 32.46 1.63
3072 4608 1.069513 CCTCGGTTGCAACGGGATATA 59.930 52.381 29.81 14.22 32.46 0.86
3073 4609 2.484065 CCTCGGTTGCAACGGGATATAA 60.484 50.000 29.81 13.61 32.46 0.98
3074 4610 3.199677 CTCGGTTGCAACGGGATATAAA 58.800 45.455 29.81 13.00 32.46 1.40
3075 4611 3.607741 TCGGTTGCAACGGGATATAAAA 58.392 40.909 29.81 11.05 0.00 1.52
3076 4612 4.200874 TCGGTTGCAACGGGATATAAAAT 58.799 39.130 29.81 0.00 0.00 1.82
3077 4613 5.366460 TCGGTTGCAACGGGATATAAAATA 58.634 37.500 29.81 9.79 0.00 1.40
3078 4614 5.998981 TCGGTTGCAACGGGATATAAAATAT 59.001 36.000 29.81 0.00 0.00 1.28
3079 4615 6.487331 TCGGTTGCAACGGGATATAAAATATT 59.513 34.615 29.81 0.00 0.00 1.28
3080 4616 7.013464 TCGGTTGCAACGGGATATAAAATATTT 59.987 33.333 29.81 0.00 0.00 1.40
3081 4617 7.650104 CGGTTGCAACGGGATATAAAATATTTT 59.350 33.333 25.00 17.18 0.00 1.82
3082 4618 9.968870 GGTTGCAACGGGATATAAAATATTTTA 57.031 29.630 22.67 20.11 37.08 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.558554 CTACTCGCTCAACCCCACCG 62.559 65.000 0.00 0.00 0.00 4.94
5 6 1.218316 CTACTCGCTCAACCCCACC 59.782 63.158 0.00 0.00 0.00 4.61
6 7 1.218316 CCTACTCGCTCAACCCCAC 59.782 63.158 0.00 0.00 0.00 4.61
7 8 1.229082 ACCTACTCGCTCAACCCCA 60.229 57.895 0.00 0.00 0.00 4.96
8 9 1.218316 CACCTACTCGCTCAACCCC 59.782 63.158 0.00 0.00 0.00 4.95
9 10 1.448013 GCACCTACTCGCTCAACCC 60.448 63.158 0.00 0.00 0.00 4.11
10 11 0.737715 CTGCACCTACTCGCTCAACC 60.738 60.000 0.00 0.00 0.00 3.77
11 12 0.038159 ACTGCACCTACTCGCTCAAC 60.038 55.000 0.00 0.00 0.00 3.18
12 13 0.038251 CACTGCACCTACTCGCTCAA 60.038 55.000 0.00 0.00 0.00 3.02
13 14 1.586541 CACTGCACCTACTCGCTCA 59.413 57.895 0.00 0.00 0.00 4.26
14 15 1.153745 CCACTGCACCTACTCGCTC 60.154 63.158 0.00 0.00 0.00 5.03
15 16 2.973899 CCACTGCACCTACTCGCT 59.026 61.111 0.00 0.00 0.00 4.93
16 17 2.815647 GCCACTGCACCTACTCGC 60.816 66.667 0.00 0.00 37.47 5.03
17 18 2.507102 CGCCACTGCACCTACTCG 60.507 66.667 0.00 0.00 37.32 4.18
18 19 2.125512 CCGCCACTGCACCTACTC 60.126 66.667 0.00 0.00 37.32 2.59
19 20 3.706373 CCCGCCACTGCACCTACT 61.706 66.667 0.00 0.00 37.32 2.57
20 21 4.778143 CCCCGCCACTGCACCTAC 62.778 72.222 0.00 0.00 37.32 3.18
33 34 4.271816 CTCGTCTCCATCGCCCCG 62.272 72.222 0.00 0.00 0.00 5.73
34 35 3.917760 CCTCGTCTCCATCGCCCC 61.918 72.222 0.00 0.00 0.00 5.80
35 36 3.917760 CCCTCGTCTCCATCGCCC 61.918 72.222 0.00 0.00 0.00 6.13
36 37 3.917760 CCCCTCGTCTCCATCGCC 61.918 72.222 0.00 0.00 0.00 5.54
37 38 3.917760 CCCCCTCGTCTCCATCGC 61.918 72.222 0.00 0.00 0.00 4.58
38 39 2.123854 TCCCCCTCGTCTCCATCG 60.124 66.667 0.00 0.00 0.00 3.84
39 40 1.110518 GTCTCCCCCTCGTCTCCATC 61.111 65.000 0.00 0.00 0.00 3.51
40 41 1.075896 GTCTCCCCCTCGTCTCCAT 60.076 63.158 0.00 0.00 0.00 3.41
41 42 2.359404 GTCTCCCCCTCGTCTCCA 59.641 66.667 0.00 0.00 0.00 3.86
42 43 2.627839 ATCGTCTCCCCCTCGTCTCC 62.628 65.000 0.00 0.00 0.00 3.71
43 44 1.152922 ATCGTCTCCCCCTCGTCTC 60.153 63.158 0.00 0.00 0.00 3.36
44 45 1.454111 CATCGTCTCCCCCTCGTCT 60.454 63.158 0.00 0.00 0.00 4.18
45 46 3.121019 CATCGTCTCCCCCTCGTC 58.879 66.667 0.00 0.00 0.00 4.20
46 47 3.148279 GCATCGTCTCCCCCTCGT 61.148 66.667 0.00 0.00 0.00 4.18
47 48 4.271816 CGCATCGTCTCCCCCTCG 62.272 72.222 0.00 0.00 0.00 4.63
48 49 3.917760 CCGCATCGTCTCCCCCTC 61.918 72.222 0.00 0.00 0.00 4.30
51 52 4.467084 TTGCCGCATCGTCTCCCC 62.467 66.667 0.00 0.00 0.00 4.81
52 53 2.892425 CTTGCCGCATCGTCTCCC 60.892 66.667 0.00 0.00 0.00 4.30
53 54 2.892425 CCTTGCCGCATCGTCTCC 60.892 66.667 0.00 0.00 0.00 3.71
54 55 1.880340 CTCCTTGCCGCATCGTCTC 60.880 63.158 0.00 0.00 0.00 3.36
55 56 2.185350 CTCCTTGCCGCATCGTCT 59.815 61.111 0.00 0.00 0.00 4.18
56 57 1.880340 CTCTCCTTGCCGCATCGTC 60.880 63.158 0.00 0.00 0.00 4.20
57 58 2.185350 CTCTCCTTGCCGCATCGT 59.815 61.111 0.00 0.00 0.00 3.73
58 59 1.591059 CTCTCTCCTTGCCGCATCG 60.591 63.158 0.00 0.00 0.00 3.84
59 60 1.227497 CCTCTCTCCTTGCCGCATC 60.227 63.158 0.00 0.00 0.00 3.91
60 61 2.739996 CCCTCTCTCCTTGCCGCAT 61.740 63.158 0.00 0.00 0.00 4.73
61 62 3.393970 CCCTCTCTCCTTGCCGCA 61.394 66.667 0.00 0.00 0.00 5.69
62 63 3.077556 TCCCTCTCTCCTTGCCGC 61.078 66.667 0.00 0.00 0.00 6.53
63 64 1.684049 ACTCCCTCTCTCCTTGCCG 60.684 63.158 0.00 0.00 0.00 5.69
64 65 0.616111 TCACTCCCTCTCTCCTTGCC 60.616 60.000 0.00 0.00 0.00 4.52
65 66 0.823460 CTCACTCCCTCTCTCCTTGC 59.177 60.000 0.00 0.00 0.00 4.01
66 67 0.823460 GCTCACTCCCTCTCTCCTTG 59.177 60.000 0.00 0.00 0.00 3.61
67 68 0.325203 GGCTCACTCCCTCTCTCCTT 60.325 60.000 0.00 0.00 0.00 3.36
68 69 1.309688 GGCTCACTCCCTCTCTCCT 59.690 63.158 0.00 0.00 0.00 3.69
69 70 2.124693 CGGCTCACTCCCTCTCTCC 61.125 68.421 0.00 0.00 0.00 3.71
70 71 0.467290 ATCGGCTCACTCCCTCTCTC 60.467 60.000 0.00 0.00 0.00 3.20
71 72 0.032615 AATCGGCTCACTCCCTCTCT 60.033 55.000 0.00 0.00 0.00 3.10
72 73 0.827368 AAATCGGCTCACTCCCTCTC 59.173 55.000 0.00 0.00 0.00 3.20
73 74 0.539051 CAAATCGGCTCACTCCCTCT 59.461 55.000 0.00 0.00 0.00 3.69
74 75 0.462759 CCAAATCGGCTCACTCCCTC 60.463 60.000 0.00 0.00 0.00 4.30
75 76 1.604378 CCAAATCGGCTCACTCCCT 59.396 57.895 0.00 0.00 0.00 4.20
76 77 1.452108 CCCAAATCGGCTCACTCCC 60.452 63.158 0.00 0.00 0.00 4.30
77 78 1.452108 CCCCAAATCGGCTCACTCC 60.452 63.158 0.00 0.00 0.00 3.85
78 79 1.452108 CCCCCAAATCGGCTCACTC 60.452 63.158 0.00 0.00 0.00 3.51
79 80 2.677228 CCCCCAAATCGGCTCACT 59.323 61.111 0.00 0.00 0.00 3.41
93 94 4.796775 GCCCCCACCATTTCCCCC 62.797 72.222 0.00 0.00 0.00 5.40
96 97 4.759205 AGCGCCCCCACCATTTCC 62.759 66.667 2.29 0.00 0.00 3.13
97 98 3.451894 CAGCGCCCCCACCATTTC 61.452 66.667 2.29 0.00 0.00 2.17
118 119 4.078516 GAGGGGAACGACCACCGG 62.079 72.222 0.00 0.00 44.65 5.28
119 120 4.078516 GGAGGGGAACGACCACCG 62.079 72.222 0.00 0.00 44.65 4.94
120 121 3.714001 GGGAGGGGAACGACCACC 61.714 72.222 0.00 0.00 44.65 4.61
121 122 2.606826 AGGGAGGGGAACGACCAC 60.607 66.667 0.00 0.00 43.70 4.16
122 123 2.284405 GAGGGAGGGGAACGACCA 60.284 66.667 0.00 0.00 41.20 4.02
123 124 1.199425 AAAGAGGGAGGGGAACGACC 61.199 60.000 0.00 0.00 38.08 4.79
124 125 1.565067 TAAAGAGGGAGGGGAACGAC 58.435 55.000 0.00 0.00 0.00 4.34
125 126 2.563039 ATAAAGAGGGAGGGGAACGA 57.437 50.000 0.00 0.00 0.00 3.85
126 127 3.965347 TCTTATAAAGAGGGAGGGGAACG 59.035 47.826 0.00 0.00 32.71 3.95
127 128 5.369993 ACATCTTATAAAGAGGGAGGGGAAC 59.630 44.000 6.31 0.00 43.24 3.62
128 129 5.369699 CACATCTTATAAAGAGGGAGGGGAA 59.630 44.000 6.31 0.00 43.24 3.97
129 130 4.907875 CACATCTTATAAAGAGGGAGGGGA 59.092 45.833 6.31 0.00 43.24 4.81
130 131 4.042187 CCACATCTTATAAAGAGGGAGGGG 59.958 50.000 6.31 0.00 43.24 4.79
131 132 4.505742 GCCACATCTTATAAAGAGGGAGGG 60.506 50.000 13.29 9.38 43.24 4.30
132 133 4.646572 GCCACATCTTATAAAGAGGGAGG 58.353 47.826 6.31 8.03 43.24 4.30
133 134 4.202264 ACGCCACATCTTATAAAGAGGGAG 60.202 45.833 6.31 6.63 43.24 4.30
134 135 3.709653 ACGCCACATCTTATAAAGAGGGA 59.290 43.478 6.31 0.00 43.24 4.20
135 136 4.073293 ACGCCACATCTTATAAAGAGGG 57.927 45.455 6.31 4.06 43.24 4.30
136 137 6.436843 AAAACGCCACATCTTATAAAGAGG 57.563 37.500 0.13 0.13 44.43 3.69
137 138 6.747280 CCAAAAACGCCACATCTTATAAAGAG 59.253 38.462 0.00 0.00 41.61 2.85
138 139 6.431543 TCCAAAAACGCCACATCTTATAAAGA 59.568 34.615 0.00 0.00 42.69 2.52
139 140 6.616947 TCCAAAAACGCCACATCTTATAAAG 58.383 36.000 0.00 0.00 0.00 1.85
140 141 6.576662 TCCAAAAACGCCACATCTTATAAA 57.423 33.333 0.00 0.00 0.00 1.40
141 142 6.207810 ACTTCCAAAAACGCCACATCTTATAA 59.792 34.615 0.00 0.00 0.00 0.98
142 143 5.708230 ACTTCCAAAAACGCCACATCTTATA 59.292 36.000 0.00 0.00 0.00 0.98
143 144 4.522789 ACTTCCAAAAACGCCACATCTTAT 59.477 37.500 0.00 0.00 0.00 1.73
144 145 3.886505 ACTTCCAAAAACGCCACATCTTA 59.113 39.130 0.00 0.00 0.00 2.10
145 146 2.693074 ACTTCCAAAAACGCCACATCTT 59.307 40.909 0.00 0.00 0.00 2.40
146 147 2.306847 ACTTCCAAAAACGCCACATCT 58.693 42.857 0.00 0.00 0.00 2.90
147 148 2.793278 ACTTCCAAAAACGCCACATC 57.207 45.000 0.00 0.00 0.00 3.06
148 149 3.535280 AAACTTCCAAAAACGCCACAT 57.465 38.095 0.00 0.00 0.00 3.21
149 150 3.254892 GAAAACTTCCAAAAACGCCACA 58.745 40.909 0.00 0.00 0.00 4.17
150 151 2.280445 CGAAAACTTCCAAAAACGCCAC 59.720 45.455 0.00 0.00 0.00 5.01
151 152 2.094649 ACGAAAACTTCCAAAAACGCCA 60.095 40.909 0.00 0.00 0.00 5.69
152 153 2.280445 CACGAAAACTTCCAAAAACGCC 59.720 45.455 0.00 0.00 0.00 5.68
153 154 2.284798 GCACGAAAACTTCCAAAAACGC 60.285 45.455 0.00 0.00 0.00 4.84
154 155 2.036086 CGCACGAAAACTTCCAAAAACG 60.036 45.455 0.00 0.00 0.00 3.60
155 156 2.284798 GCGCACGAAAACTTCCAAAAAC 60.285 45.455 0.30 0.00 0.00 2.43
156 157 1.921230 GCGCACGAAAACTTCCAAAAA 59.079 42.857 0.30 0.00 0.00 1.94
157 158 1.551145 GCGCACGAAAACTTCCAAAA 58.449 45.000 0.30 0.00 0.00 2.44
158 159 0.248702 GGCGCACGAAAACTTCCAAA 60.249 50.000 10.83 0.00 0.00 3.28
159 160 1.357334 GGCGCACGAAAACTTCCAA 59.643 52.632 10.83 0.00 0.00 3.53
160 161 3.027292 GGCGCACGAAAACTTCCA 58.973 55.556 10.83 0.00 0.00 3.53
188 189 4.814294 CGGTCGTGGGCTAGCCAC 62.814 72.222 34.09 26.13 37.98 5.01
227 228 1.495584 TTTCTCTTGTCACGTGCGGC 61.496 55.000 11.67 4.14 0.00 6.53
228 229 0.934496 TTTTCTCTTGTCACGTGCGG 59.066 50.000 11.67 3.88 0.00 5.69
229 230 1.653679 CGTTTTCTCTTGTCACGTGCG 60.654 52.381 11.67 0.00 0.00 5.34
230 231 1.591158 TCGTTTTCTCTTGTCACGTGC 59.409 47.619 11.67 6.86 32.65 5.34
231 232 3.918258 TTCGTTTTCTCTTGTCACGTG 57.082 42.857 9.94 9.94 32.65 4.49
232 233 3.181774 CGATTCGTTTTCTCTTGTCACGT 59.818 43.478 0.00 0.00 32.65 4.49
233 234 3.711425 CGATTCGTTTTCTCTTGTCACG 58.289 45.455 0.00 0.00 0.00 4.35
234 235 3.470562 GCGATTCGTTTTCTCTTGTCAC 58.529 45.455 8.03 0.00 0.00 3.67
235 236 2.478894 GGCGATTCGTTTTCTCTTGTCA 59.521 45.455 8.03 0.00 0.00 3.58
236 237 2.159693 GGGCGATTCGTTTTCTCTTGTC 60.160 50.000 8.03 0.00 0.00 3.18
237 238 1.804748 GGGCGATTCGTTTTCTCTTGT 59.195 47.619 8.03 0.00 0.00 3.16
238 239 1.804151 TGGGCGATTCGTTTTCTCTTG 59.196 47.619 8.03 0.00 0.00 3.02
239 240 1.804748 GTGGGCGATTCGTTTTCTCTT 59.195 47.619 8.03 0.00 0.00 2.85
240 241 1.439679 GTGGGCGATTCGTTTTCTCT 58.560 50.000 8.03 0.00 0.00 3.10
241 242 0.094730 CGTGGGCGATTCGTTTTCTC 59.905 55.000 8.03 0.00 41.33 2.87
242 243 0.601841 ACGTGGGCGATTCGTTTTCT 60.602 50.000 8.03 0.00 42.00 2.52
243 244 1.070038 TACGTGGGCGATTCGTTTTC 58.930 50.000 8.03 0.00 42.00 2.29
244 245 0.792031 GTACGTGGGCGATTCGTTTT 59.208 50.000 8.03 0.00 42.00 2.43
245 246 0.319727 TGTACGTGGGCGATTCGTTT 60.320 50.000 8.03 0.00 42.00 3.60
246 247 0.319727 TTGTACGTGGGCGATTCGTT 60.320 50.000 8.03 0.00 42.00 3.85
247 248 0.108520 ATTGTACGTGGGCGATTCGT 60.109 50.000 8.03 0.00 42.00 3.85
248 249 1.519758 GTATTGTACGTGGGCGATTCG 59.480 52.381 0.00 0.62 42.00 3.34
249 250 2.542597 TGTATTGTACGTGGGCGATTC 58.457 47.619 0.00 0.00 42.00 2.52
250 251 2.676632 TGTATTGTACGTGGGCGATT 57.323 45.000 0.00 0.00 42.00 3.34
251 252 2.479837 CATGTATTGTACGTGGGCGAT 58.520 47.619 0.00 0.00 41.00 4.58
252 253 1.929230 CATGTATTGTACGTGGGCGA 58.071 50.000 0.00 0.00 41.00 5.54
258 259 4.900652 TGGGGGTATACATGTATTGTACGT 59.099 41.667 22.90 0.88 43.46 3.57
259 260 5.011329 ACTGGGGGTATACATGTATTGTACG 59.989 44.000 22.90 9.03 43.46 3.67
260 261 6.183361 ACACTGGGGGTATACATGTATTGTAC 60.183 42.308 22.90 14.82 43.46 2.90
261 262 5.906495 ACACTGGGGGTATACATGTATTGTA 59.094 40.000 22.90 3.17 44.71 2.41
262 263 4.724798 ACACTGGGGGTATACATGTATTGT 59.275 41.667 22.90 15.01 42.62 2.71
263 264 5.304686 ACACTGGGGGTATACATGTATTG 57.695 43.478 22.90 14.42 0.00 1.90
264 265 5.906495 TGTACACTGGGGGTATACATGTATT 59.094 40.000 22.90 8.14 0.00 1.89
265 266 5.469579 TGTACACTGGGGGTATACATGTAT 58.530 41.667 21.57 21.57 0.00 2.29
266 267 4.881361 TGTACACTGGGGGTATACATGTA 58.119 43.478 8.27 8.27 0.00 2.29
267 268 3.726790 TGTACACTGGGGGTATACATGT 58.273 45.455 2.69 2.69 0.00 3.21
268 269 4.764050 TTGTACACTGGGGGTATACATG 57.236 45.455 5.01 0.00 0.00 3.21
269 270 5.252164 ACTTTTGTACACTGGGGGTATACAT 59.748 40.000 5.01 0.00 0.00 2.29
270 271 4.598373 ACTTTTGTACACTGGGGGTATACA 59.402 41.667 5.01 0.00 0.00 2.29
271 272 5.169992 ACTTTTGTACACTGGGGGTATAC 57.830 43.478 0.00 0.00 0.00 1.47
272 273 6.949117 TTACTTTTGTACACTGGGGGTATA 57.051 37.500 0.00 0.00 34.15 1.47
273 274 5.846528 TTACTTTTGTACACTGGGGGTAT 57.153 39.130 0.00 0.00 34.15 2.73
274 275 5.569227 CGATTACTTTTGTACACTGGGGGTA 60.569 44.000 0.00 0.00 34.15 3.69
275 276 4.659115 GATTACTTTTGTACACTGGGGGT 58.341 43.478 0.00 0.00 34.15 4.95
276 277 3.687698 CGATTACTTTTGTACACTGGGGG 59.312 47.826 0.00 0.00 34.15 5.40
277 278 3.687698 CCGATTACTTTTGTACACTGGGG 59.312 47.826 0.00 0.00 34.15 4.96
278 279 3.687698 CCCGATTACTTTTGTACACTGGG 59.312 47.826 0.00 0.00 34.15 4.45
279 280 3.126343 GCCCGATTACTTTTGTACACTGG 59.874 47.826 0.00 0.00 34.15 4.00
280 281 3.126343 GGCCCGATTACTTTTGTACACTG 59.874 47.826 0.00 0.00 34.15 3.66
281 282 3.340928 GGCCCGATTACTTTTGTACACT 58.659 45.455 0.00 0.00 34.15 3.55
282 283 2.094734 CGGCCCGATTACTTTTGTACAC 59.905 50.000 0.00 0.00 34.15 2.90
283 284 2.348660 CGGCCCGATTACTTTTGTACA 58.651 47.619 0.00 0.00 34.15 2.90
284 285 1.667212 CCGGCCCGATTACTTTTGTAC 59.333 52.381 3.71 0.00 34.15 2.90
285 286 1.278699 ACCGGCCCGATTACTTTTGTA 59.721 47.619 3.71 0.00 0.00 2.41
286 287 0.037160 ACCGGCCCGATTACTTTTGT 59.963 50.000 3.71 0.00 0.00 2.83
287 288 0.450184 CACCGGCCCGATTACTTTTG 59.550 55.000 3.71 0.00 0.00 2.44
288 289 1.310216 GCACCGGCCCGATTACTTTT 61.310 55.000 3.71 0.00 0.00 2.27
289 290 1.747745 GCACCGGCCCGATTACTTT 60.748 57.895 3.71 0.00 0.00 2.66
290 291 2.124860 GCACCGGCCCGATTACTT 60.125 61.111 3.71 0.00 0.00 2.24
291 292 4.524318 CGCACCGGCCCGATTACT 62.524 66.667 3.71 0.00 36.38 2.24
302 303 3.118454 CTGTACAAGCCCGCACCG 61.118 66.667 0.00 0.00 0.00 4.94
303 304 2.746277 CCTGTACAAGCCCGCACC 60.746 66.667 0.00 0.00 0.00 5.01
304 305 2.746277 CCCTGTACAAGCCCGCAC 60.746 66.667 0.00 0.00 0.00 5.34
305 306 4.715523 GCCCTGTACAAGCCCGCA 62.716 66.667 6.31 0.00 0.00 5.69
306 307 4.410400 AGCCCTGTACAAGCCCGC 62.410 66.667 12.66 3.24 0.00 6.13
307 308 1.895020 TACAGCCCTGTACAAGCCCG 61.895 60.000 12.66 8.03 44.42 6.13
308 309 1.988015 TACAGCCCTGTACAAGCCC 59.012 57.895 12.66 0.00 44.42 5.19
315 316 4.485834 CGCGCGTACAGCCCTGTA 62.486 66.667 24.19 4.11 44.42 2.74
332 333 1.373590 TTTTTATGCCCGCGGAGAGC 61.374 55.000 30.73 22.74 43.95 4.09
333 334 0.657840 CTTTTTATGCCCGCGGAGAG 59.342 55.000 30.73 11.80 0.00 3.20
334 335 0.250793 TCTTTTTATGCCCGCGGAGA 59.749 50.000 30.73 16.25 0.00 3.71
335 336 0.377203 GTCTTTTTATGCCCGCGGAG 59.623 55.000 30.73 18.40 0.00 4.63
336 337 1.363145 CGTCTTTTTATGCCCGCGGA 61.363 55.000 30.73 8.21 0.00 5.54
337 338 1.061887 CGTCTTTTTATGCCCGCGG 59.938 57.895 21.04 21.04 0.00 6.46
338 339 0.655733 ATCGTCTTTTTATGCCCGCG 59.344 50.000 0.00 0.00 0.00 6.46
339 340 1.332904 CGATCGTCTTTTTATGCCCGC 60.333 52.381 7.03 0.00 0.00 6.13
340 341 1.931172 ACGATCGTCTTTTTATGCCCG 59.069 47.619 16.60 0.00 0.00 6.13
341 342 2.538939 GCACGATCGTCTTTTTATGCCC 60.539 50.000 19.84 0.00 0.00 5.36
342 343 2.538939 GGCACGATCGTCTTTTTATGCC 60.539 50.000 19.84 20.80 44.11 4.40
343 344 2.538939 GGGCACGATCGTCTTTTTATGC 60.539 50.000 19.84 15.71 0.00 3.14
344 345 2.031683 GGGGCACGATCGTCTTTTTATG 59.968 50.000 19.84 5.71 0.00 1.90
345 346 2.093128 AGGGGCACGATCGTCTTTTTAT 60.093 45.455 19.84 0.00 0.00 1.40
346 347 1.276989 AGGGGCACGATCGTCTTTTTA 59.723 47.619 19.84 0.00 0.00 1.52
347 348 0.036306 AGGGGCACGATCGTCTTTTT 59.964 50.000 19.84 1.27 0.00 1.94
348 349 0.391263 GAGGGGCACGATCGTCTTTT 60.391 55.000 19.84 3.01 0.00 2.27
349 350 1.218316 GAGGGGCACGATCGTCTTT 59.782 57.895 19.84 2.22 0.00 2.52
350 351 1.258445 AAGAGGGGCACGATCGTCTT 61.258 55.000 19.84 14.41 34.52 3.01
351 352 1.668101 GAAGAGGGGCACGATCGTCT 61.668 60.000 19.84 12.61 0.00 4.18
352 353 1.227002 GAAGAGGGGCACGATCGTC 60.227 63.158 19.84 13.04 0.00 4.20
353 354 1.982395 TGAAGAGGGGCACGATCGT 60.982 57.895 16.60 16.60 0.00 3.73
354 355 1.519455 GTGAAGAGGGGCACGATCG 60.519 63.158 14.88 14.88 0.00 3.69
355 356 4.522971 GTGAAGAGGGGCACGATC 57.477 61.111 0.00 0.00 0.00 3.69
359 360 1.084370 CGATTCGTGAAGAGGGGCAC 61.084 60.000 0.00 0.00 0.00 5.01
360 361 1.218047 CGATTCGTGAAGAGGGGCA 59.782 57.895 0.00 0.00 0.00 5.36
361 362 0.391263 AACGATTCGTGAAGAGGGGC 60.391 55.000 13.22 0.00 39.99 5.80
362 363 2.094762 AAACGATTCGTGAAGAGGGG 57.905 50.000 13.22 0.00 39.99 4.79
363 364 3.496884 TCAAAAACGATTCGTGAAGAGGG 59.503 43.478 13.22 0.00 39.99 4.30
364 365 4.025229 TGTCAAAAACGATTCGTGAAGAGG 60.025 41.667 13.22 1.42 39.99 3.69
365 366 5.051039 TCTGTCAAAAACGATTCGTGAAGAG 60.051 40.000 13.22 5.63 39.99 2.85
366 367 4.806775 TCTGTCAAAAACGATTCGTGAAGA 59.193 37.500 13.22 6.18 39.99 2.87
367 368 5.078153 TCTGTCAAAAACGATTCGTGAAG 57.922 39.130 13.22 3.88 39.99 3.02
368 369 5.465390 AGATCTGTCAAAAACGATTCGTGAA 59.535 36.000 13.22 0.00 39.99 3.18
369 370 4.988540 AGATCTGTCAAAAACGATTCGTGA 59.011 37.500 13.22 2.65 39.99 4.35
370 371 5.107491 TGAGATCTGTCAAAAACGATTCGTG 60.107 40.000 13.22 0.00 39.99 4.35
371 372 4.988540 TGAGATCTGTCAAAAACGATTCGT 59.011 37.500 5.75 5.75 43.97 3.85
372 373 5.515548 TGAGATCTGTCAAAAACGATTCG 57.484 39.130 0.00 4.14 0.00 3.34
373 374 5.319931 GCTGAGATCTGTCAAAAACGATTC 58.680 41.667 0.00 0.00 0.00 2.52
374 375 4.154918 GGCTGAGATCTGTCAAAAACGATT 59.845 41.667 0.00 0.00 0.00 3.34
375 376 3.686726 GGCTGAGATCTGTCAAAAACGAT 59.313 43.478 0.00 0.00 0.00 3.73
376 377 3.067106 GGCTGAGATCTGTCAAAAACGA 58.933 45.455 0.00 0.00 0.00 3.85
377 378 2.159787 CGGCTGAGATCTGTCAAAAACG 60.160 50.000 0.00 0.00 0.00 3.60
378 379 2.808543 ACGGCTGAGATCTGTCAAAAAC 59.191 45.455 0.00 0.00 0.00 2.43
379 380 3.067106 GACGGCTGAGATCTGTCAAAAA 58.933 45.455 0.00 0.00 39.13 1.94
380 381 2.612972 GGACGGCTGAGATCTGTCAAAA 60.613 50.000 0.00 0.00 40.63 2.44
381 382 1.066858 GGACGGCTGAGATCTGTCAAA 60.067 52.381 0.00 0.00 40.63 2.69
382 383 0.532573 GGACGGCTGAGATCTGTCAA 59.467 55.000 0.00 0.00 40.63 3.18
383 384 0.323816 AGGACGGCTGAGATCTGTCA 60.324 55.000 0.00 0.00 40.63 3.58
384 385 0.820871 AAGGACGGCTGAGATCTGTC 59.179 55.000 0.00 0.10 38.71 3.51
385 386 0.534412 CAAGGACGGCTGAGATCTGT 59.466 55.000 0.00 0.00 0.00 3.41
386 387 0.534412 ACAAGGACGGCTGAGATCTG 59.466 55.000 0.00 0.00 0.00 2.90
387 388 0.534412 CACAAGGACGGCTGAGATCT 59.466 55.000 0.00 0.00 0.00 2.75
388 389 0.247736 ACACAAGGACGGCTGAGATC 59.752 55.000 0.00 0.00 0.00 2.75
389 390 0.687354 AACACAAGGACGGCTGAGAT 59.313 50.000 0.00 0.00 0.00 2.75
390 391 0.468226 AAACACAAGGACGGCTGAGA 59.532 50.000 0.00 0.00 0.00 3.27
391 392 0.868406 GAAACACAAGGACGGCTGAG 59.132 55.000 0.00 0.00 0.00 3.35
392 393 0.468226 AGAAACACAAGGACGGCTGA 59.532 50.000 0.00 0.00 0.00 4.26
393 394 0.868406 GAGAAACACAAGGACGGCTG 59.132 55.000 0.00 0.00 0.00 4.85
394 395 0.250338 GGAGAAACACAAGGACGGCT 60.250 55.000 0.00 0.00 0.00 5.52
395 396 1.235281 GGGAGAAACACAAGGACGGC 61.235 60.000 0.00 0.00 0.00 5.68
396 397 0.605589 GGGGAGAAACACAAGGACGG 60.606 60.000 0.00 0.00 0.00 4.79
397 398 0.605589 GGGGGAGAAACACAAGGACG 60.606 60.000 0.00 0.00 0.00 4.79
398 399 0.771755 AGGGGGAGAAACACAAGGAC 59.228 55.000 0.00 0.00 0.00 3.85
399 400 1.064825 GAGGGGGAGAAACACAAGGA 58.935 55.000 0.00 0.00 0.00 3.36
400 401 0.321653 CGAGGGGGAGAAACACAAGG 60.322 60.000 0.00 0.00 0.00 3.61
401 402 0.955919 GCGAGGGGGAGAAACACAAG 60.956 60.000 0.00 0.00 0.00 3.16
402 403 1.072505 GCGAGGGGGAGAAACACAA 59.927 57.895 0.00 0.00 0.00 3.33
403 404 2.747686 GCGAGGGGGAGAAACACA 59.252 61.111 0.00 0.00 0.00 3.72
404 405 2.434359 CGCGAGGGGGAGAAACAC 60.434 66.667 0.00 0.00 0.00 3.32
405 406 2.444700 GAACGCGAGGGGGAGAAACA 62.445 60.000 15.93 0.00 0.00 2.83
406 407 1.740664 GAACGCGAGGGGGAGAAAC 60.741 63.158 15.93 0.00 0.00 2.78
407 408 2.167398 CTGAACGCGAGGGGGAGAAA 62.167 60.000 15.93 0.00 0.00 2.52
408 409 2.602267 TGAACGCGAGGGGGAGAA 60.602 61.111 15.93 0.00 0.00 2.87
409 410 3.068691 CTGAACGCGAGGGGGAGA 61.069 66.667 15.93 0.00 0.00 3.71
410 411 4.821589 GCTGAACGCGAGGGGGAG 62.822 72.222 15.93 0.21 0.00 4.30
438 439 4.704833 GAGGCTTGCTCCGGTGCA 62.705 66.667 26.46 26.46 41.65 4.57
440 441 4.785453 GGGAGGCTTGCTCCGGTG 62.785 72.222 0.00 0.00 41.73 4.94
444 445 3.803162 GAGGGGGAGGCTTGCTCC 61.803 72.222 0.00 0.00 40.15 4.70
445 446 4.168291 CGAGGGGGAGGCTTGCTC 62.168 72.222 0.00 0.00 0.00 4.26
446 447 2.605535 TATCGAGGGGGAGGCTTGCT 62.606 60.000 0.00 0.00 0.00 3.91
447 448 1.484444 ATATCGAGGGGGAGGCTTGC 61.484 60.000 0.00 0.00 0.00 4.01
448 449 1.059913 AATATCGAGGGGGAGGCTTG 58.940 55.000 0.00 0.00 0.00 4.01
449 450 1.700186 GAAATATCGAGGGGGAGGCTT 59.300 52.381 0.00 0.00 0.00 4.35
450 451 1.353091 GAAATATCGAGGGGGAGGCT 58.647 55.000 0.00 0.00 0.00 4.58
451 452 0.325272 GGAAATATCGAGGGGGAGGC 59.675 60.000 0.00 0.00 0.00 4.70
452 453 1.729586 TGGAAATATCGAGGGGGAGG 58.270 55.000 0.00 0.00 0.00 4.30
453 454 2.438021 TGTTGGAAATATCGAGGGGGAG 59.562 50.000 0.00 0.00 0.00 4.30
454 455 2.483547 TGTTGGAAATATCGAGGGGGA 58.516 47.619 0.00 0.00 0.00 4.81
494 495 2.119886 CTCGCCTAGAGTTGAGGGG 58.880 63.158 0.00 0.00 45.96 4.79
655 656 1.736681 GAAGTGACATGGAGCTGAAGC 59.263 52.381 0.00 0.00 42.49 3.86
698 699 0.033796 CAGTTGGCATGGGTCCATCT 60.034 55.000 0.00 0.00 34.81 2.90
701 702 2.440147 CCAGTTGGCATGGGTCCA 59.560 61.111 0.00 0.00 33.94 4.02
783 784 5.394443 GGCAAAGTGGCAATCTCAATATTGA 60.394 40.000 17.07 17.07 43.14 2.57
786 787 4.660789 GGCAAAGTGGCAATCTCAATAT 57.339 40.909 0.00 0.00 43.14 1.28
812 813 2.796593 GTGTTTTTGTTGAGATGCAGCC 59.203 45.455 0.00 0.00 0.00 4.85
830 834 3.007940 TCTTCCGAATGTGGAATCTGTGT 59.992 43.478 0.00 0.00 46.53 3.72
847 851 9.598517 CAAGAGCAGATAATCCTATTATCTTCC 57.401 37.037 16.04 11.58 39.10 3.46
909 913 7.978982 TGTTTGACTTTCTTTCTCTTCTTCAG 58.021 34.615 0.00 0.00 0.00 3.02
1011 1015 4.499696 CCTGAACAAACCAAGTTGGCTAAG 60.500 45.833 22.25 11.66 42.67 2.18
1027 1031 3.137544 ACACACCCATACTTTCCTGAACA 59.862 43.478 0.00 0.00 0.00 3.18
1046 1050 8.651588 CAGACTCAATTCTATCTTTGTACACAC 58.348 37.037 0.00 0.00 0.00 3.82
1058 1062 7.108194 TGCATGTTCTTCAGACTCAATTCTAT 58.892 34.615 0.00 0.00 0.00 1.98
1121 1128 1.464997 CAGCCACGAAGCTTTTAGTCC 59.535 52.381 0.00 0.00 42.61 3.85
1125 1132 3.146066 ACATTCAGCCACGAAGCTTTTA 58.854 40.909 0.00 0.00 42.61 1.52
1137 1144 0.321919 TGAGTGCCTGACATTCAGCC 60.322 55.000 0.00 0.00 42.98 4.85
1179 1186 3.134804 AGCATACAGTGATCACCCTTACC 59.865 47.826 22.21 7.51 0.00 2.85
1346 1358 1.776662 AGCGGCTTCTATGTCCACTA 58.223 50.000 0.00 0.00 0.00 2.74
1358 1370 1.463674 CAGGTAATCCAAAGCGGCTT 58.536 50.000 9.94 9.94 35.89 4.35
1362 1374 3.243068 GGTTATGCAGGTAATCCAAAGCG 60.243 47.826 0.00 0.00 35.89 4.68
2038 2907 3.665675 AACGTCCTGCATCGAGGGC 62.666 63.158 11.80 1.55 34.02 5.19
2122 2992 4.976116 AGCAACGTTTGAGCAATAGAAAAC 59.024 37.500 11.17 0.00 0.00 2.43
2248 3672 8.817100 CACAGTTTACATACATGACGAACATAT 58.183 33.333 0.00 0.00 37.46 1.78
2304 3728 5.005971 CCAAGTCGAAAGAAAAGTTCACGTA 59.994 40.000 0.00 0.00 45.01 3.57
2307 3731 5.479716 TCCAAGTCGAAAGAAAAGTTCAC 57.520 39.130 0.00 0.00 45.01 3.18
2396 3916 8.182227 GTGCAAGTTATCTTTATTAAGGGTGTC 58.818 37.037 0.00 0.00 32.02 3.67
2433 3953 9.967245 GTTTCAACTTTCAAGTTTAACAATTCC 57.033 29.630 15.73 0.00 46.52 3.01
2483 4007 8.497910 TGCTCCCTGATAAATTTCTACTAGAT 57.502 34.615 0.00 0.00 0.00 1.98
2484 4008 7.914427 TGCTCCCTGATAAATTTCTACTAGA 57.086 36.000 0.00 0.00 0.00 2.43
2503 4030 2.626780 GGGCGAGGTTTGTTGCTCC 61.627 63.158 0.00 0.00 0.00 4.70
2535 4062 3.349006 ACTGCGCAGGCGTCTTTG 61.349 61.111 38.27 14.01 44.10 2.77
2536 4063 3.349006 CACTGCGCAGGCGTCTTT 61.349 61.111 38.27 15.45 44.10 2.52
2551 4078 2.348998 CACCTCCCTGTGCTCCAC 59.651 66.667 0.00 0.00 34.56 4.02
2595 4122 0.176680 CGAGGTATTCAGTGGCAGCT 59.823 55.000 0.00 0.00 0.00 4.24
2662 4189 4.537433 AAGCGCATCCTCCTCCGC 62.537 66.667 11.47 0.00 46.14 5.54
2663 4190 2.279784 GAAGCGCATCCTCCTCCG 60.280 66.667 11.47 0.00 0.00 4.63
2683 4210 2.320587 GGACACCTCTGCGTTGCTG 61.321 63.158 0.00 0.00 0.00 4.41
2694 4221 2.203907 AGCTCCTGCAGGACACCT 60.204 61.111 32.00 22.86 39.78 4.00
2710 4237 1.066858 ACCTTGCTCATACACACCGAG 60.067 52.381 0.00 0.00 0.00 4.63
2728 4255 0.179129 CGTGACGGGGTACATACACC 60.179 60.000 0.00 0.00 46.41 4.16
2729 4256 0.810648 TCGTGACGGGGTACATACAC 59.189 55.000 4.70 0.00 0.00 2.90
2730 4257 1.097232 CTCGTGACGGGGTACATACA 58.903 55.000 4.70 0.00 0.00 2.29
2731 4258 0.383231 CCTCGTGACGGGGTACATAC 59.617 60.000 17.32 0.00 43.41 2.39
2732 4259 2.797837 CCTCGTGACGGGGTACATA 58.202 57.895 17.32 0.00 43.41 2.29
2733 4260 3.612251 CCTCGTGACGGGGTACAT 58.388 61.111 17.32 0.00 43.41 2.29
2761 4288 2.047179 GAAAGGAAGAGGCGGCGT 60.047 61.111 9.37 0.00 0.00 5.68
2813 4349 2.811317 CAGGAGTTCCGCAGACGC 60.811 66.667 0.00 0.00 42.08 5.19
2815 4351 0.250513 ATTCCAGGAGTTCCGCAGAC 59.749 55.000 0.00 0.00 42.08 3.51
2816 4352 0.537188 GATTCCAGGAGTTCCGCAGA 59.463 55.000 0.00 0.00 42.08 4.26
2819 4355 0.744771 GGTGATTCCAGGAGTTCCGC 60.745 60.000 0.00 0.00 42.08 5.54
2822 4358 0.991920 TGGGGTGATTCCAGGAGTTC 59.008 55.000 0.00 0.00 38.11 3.01
2824 4360 1.566231 GATTGGGGTGATTCCAGGAGT 59.434 52.381 0.00 0.00 38.11 3.85
2845 4381 0.470341 GGGAAGAAGCGAAGGCCTAT 59.530 55.000 5.16 0.00 41.24 2.57
2849 4385 0.735471 GATTGGGAAGAAGCGAAGGC 59.265 55.000 0.00 0.00 40.37 4.35
2850 4386 1.065126 AGGATTGGGAAGAAGCGAAGG 60.065 52.381 0.00 0.00 0.00 3.46
2889 4425 0.694444 TCTATGGCTCCTTCACCCCC 60.694 60.000 0.00 0.00 0.00 5.40
2893 4429 2.038295 CTGGGATCTATGGCTCCTTCAC 59.962 54.545 0.00 0.00 0.00 3.18
2926 4462 4.509737 GTCTGGTAGGGACGCCGC 62.510 72.222 0.00 0.00 0.00 6.53
2927 4463 3.834799 GGTCTGGTAGGGACGCCG 61.835 72.222 0.00 0.00 34.82 6.46
2928 4464 2.363925 AGGTCTGGTAGGGACGCC 60.364 66.667 0.00 0.00 34.82 5.68
2929 4465 1.043673 ATGAGGTCTGGTAGGGACGC 61.044 60.000 0.00 0.00 34.82 5.19
2930 4466 1.033574 GATGAGGTCTGGTAGGGACG 58.966 60.000 0.00 0.00 34.82 4.79
2931 4467 2.035632 CTGATGAGGTCTGGTAGGGAC 58.964 57.143 0.00 0.00 0.00 4.46
2932 4468 1.930204 TCTGATGAGGTCTGGTAGGGA 59.070 52.381 0.00 0.00 0.00 4.20
2933 4469 2.035632 GTCTGATGAGGTCTGGTAGGG 58.964 57.143 0.00 0.00 0.00 3.53
2934 4470 2.035632 GGTCTGATGAGGTCTGGTAGG 58.964 57.143 0.00 0.00 0.00 3.18
2935 4471 2.035632 GGGTCTGATGAGGTCTGGTAG 58.964 57.143 0.00 0.00 0.00 3.18
2936 4472 1.685180 CGGGTCTGATGAGGTCTGGTA 60.685 57.143 0.00 0.00 0.00 3.25
2937 4473 0.972983 CGGGTCTGATGAGGTCTGGT 60.973 60.000 0.00 0.00 0.00 4.00
2938 4474 1.680522 CCGGGTCTGATGAGGTCTGG 61.681 65.000 0.00 0.00 0.00 3.86
2939 4475 0.684479 TCCGGGTCTGATGAGGTCTG 60.684 60.000 0.00 0.00 0.00 3.51
2940 4476 0.396417 CTCCGGGTCTGATGAGGTCT 60.396 60.000 0.00 0.00 0.00 3.85
2941 4477 2.022240 GCTCCGGGTCTGATGAGGTC 62.022 65.000 0.00 0.00 0.00 3.85
2942 4478 2.060980 GCTCCGGGTCTGATGAGGT 61.061 63.158 0.00 0.00 0.00 3.85
2943 4479 2.801631 GGCTCCGGGTCTGATGAGG 61.802 68.421 0.00 0.00 0.00 3.86
2944 4480 1.617018 TTGGCTCCGGGTCTGATGAG 61.617 60.000 0.00 0.00 0.00 2.90
2945 4481 1.612146 TTGGCTCCGGGTCTGATGA 60.612 57.895 0.00 0.00 0.00 2.92
2946 4482 1.153289 CTTGGCTCCGGGTCTGATG 60.153 63.158 0.00 0.00 0.00 3.07
2947 4483 1.306141 TCTTGGCTCCGGGTCTGAT 60.306 57.895 0.00 0.00 0.00 2.90
2948 4484 1.984570 CTCTTGGCTCCGGGTCTGA 60.985 63.158 0.00 0.00 0.00 3.27
2949 4485 2.286523 ACTCTTGGCTCCGGGTCTG 61.287 63.158 0.00 0.00 0.00 3.51
2950 4486 2.120718 ACTCTTGGCTCCGGGTCT 59.879 61.111 0.00 0.00 0.00 3.85
2951 4487 2.266055 CACTCTTGGCTCCGGGTC 59.734 66.667 0.00 0.00 0.00 4.46
2952 4488 2.203788 TCACTCTTGGCTCCGGGT 60.204 61.111 0.00 0.00 0.00 5.28
2953 4489 2.266055 GTCACTCTTGGCTCCGGG 59.734 66.667 0.00 0.00 0.00 5.73
2954 4490 2.266055 GGTCACTCTTGGCTCCGG 59.734 66.667 0.00 0.00 0.00 5.14
2955 4491 2.125912 CGGTCACTCTTGGCTCCG 60.126 66.667 0.00 0.00 0.00 4.63
2956 4492 1.827399 TTCCGGTCACTCTTGGCTCC 61.827 60.000 0.00 0.00 0.00 4.70
2957 4493 0.250513 ATTCCGGTCACTCTTGGCTC 59.749 55.000 0.00 0.00 0.00 4.70
2958 4494 0.036010 CATTCCGGTCACTCTTGGCT 60.036 55.000 0.00 0.00 0.00 4.75
2959 4495 0.321653 ACATTCCGGTCACTCTTGGC 60.322 55.000 0.00 0.00 0.00 4.52
2960 4496 1.001974 TGACATTCCGGTCACTCTTGG 59.998 52.381 0.00 0.00 42.56 3.61
2961 4497 2.455674 TGACATTCCGGTCACTCTTG 57.544 50.000 0.00 0.00 42.56 3.02
2962 4498 3.485463 TTTGACATTCCGGTCACTCTT 57.515 42.857 0.00 0.00 46.76 2.85
2963 4499 3.703001 ATTTGACATTCCGGTCACTCT 57.297 42.857 0.00 0.00 46.76 3.24
2964 4500 3.127030 GGAATTTGACATTCCGGTCACTC 59.873 47.826 0.00 0.00 46.76 3.51
2965 4501 3.081804 GGAATTTGACATTCCGGTCACT 58.918 45.455 0.00 0.00 46.76 3.41
2966 4502 3.487563 GGAATTTGACATTCCGGTCAC 57.512 47.619 0.00 0.00 46.76 3.67
2972 4508 3.287222 TCCGGATGGAATTTGACATTCC 58.713 45.455 0.00 3.43 42.85 3.01
2984 4520 1.612513 CACCCCAATTCCGGATGGA 59.387 57.895 23.27 0.58 44.61 3.41
2985 4521 1.455587 CCACCCCAATTCCGGATGG 60.456 63.158 16.07 16.07 36.42 3.51
2986 4522 2.127232 GCCACCCCAATTCCGGATG 61.127 63.158 4.15 0.25 0.00 3.51
2987 4523 2.278738 GCCACCCCAATTCCGGAT 59.721 61.111 4.15 0.00 0.00 4.18
2988 4524 4.418328 CGCCACCCCAATTCCGGA 62.418 66.667 0.00 0.00 0.00 5.14
2990 4526 3.929334 TTCCGCCACCCCAATTCCG 62.929 63.158 0.00 0.00 0.00 4.30
2991 4527 2.036572 TTCCGCCACCCCAATTCC 59.963 61.111 0.00 0.00 0.00 3.01
2992 4528 1.304134 ACTTCCGCCACCCCAATTC 60.304 57.895 0.00 0.00 0.00 2.17
2993 4529 1.304134 GACTTCCGCCACCCCAATT 60.304 57.895 0.00 0.00 0.00 2.32
2994 4530 2.355115 GACTTCCGCCACCCCAAT 59.645 61.111 0.00 0.00 0.00 3.16
2995 4531 4.323477 CGACTTCCGCCACCCCAA 62.323 66.667 0.00 0.00 0.00 4.12
2998 4534 4.452733 CTCCGACTTCCGCCACCC 62.453 72.222 0.00 0.00 36.84 4.61
3000 4536 4.373116 TGCTCCGACTTCCGCCAC 62.373 66.667 0.00 0.00 36.84 5.01
3001 4537 4.069232 CTGCTCCGACTTCCGCCA 62.069 66.667 0.00 0.00 36.84 5.69
3002 4538 4.070552 ACTGCTCCGACTTCCGCC 62.071 66.667 0.00 0.00 36.84 6.13
3003 4539 2.811317 CACTGCTCCGACTTCCGC 60.811 66.667 0.00 0.00 36.84 5.54
3004 4540 2.811317 GCACTGCTCCGACTTCCG 60.811 66.667 0.00 0.00 38.18 4.30
3005 4541 1.294659 CTTGCACTGCTCCGACTTCC 61.295 60.000 1.98 0.00 0.00 3.46
3006 4542 0.319900 TCTTGCACTGCTCCGACTTC 60.320 55.000 1.98 0.00 0.00 3.01
3007 4543 0.320247 CTCTTGCACTGCTCCGACTT 60.320 55.000 1.98 0.00 0.00 3.01
3008 4544 1.291588 CTCTTGCACTGCTCCGACT 59.708 57.895 1.98 0.00 0.00 4.18
3009 4545 1.739562 CCTCTTGCACTGCTCCGAC 60.740 63.158 1.98 0.00 0.00 4.79
3010 4546 1.758440 AACCTCTTGCACTGCTCCGA 61.758 55.000 1.98 0.00 0.00 4.55
3011 4547 0.886490 AAACCTCTTGCACTGCTCCG 60.886 55.000 1.98 0.00 0.00 4.63
3012 4548 1.322442 AAAACCTCTTGCACTGCTCC 58.678 50.000 1.98 0.00 0.00 4.70
3031 4567 8.455682 CCGAGGCATTGTTCTAGTAAATAAAAA 58.544 33.333 0.00 0.00 0.00 1.94
3032 4568 7.608761 ACCGAGGCATTGTTCTAGTAAATAAAA 59.391 33.333 0.00 0.00 0.00 1.52
3033 4569 7.107542 ACCGAGGCATTGTTCTAGTAAATAAA 58.892 34.615 0.00 0.00 0.00 1.40
3034 4570 6.646267 ACCGAGGCATTGTTCTAGTAAATAA 58.354 36.000 0.00 0.00 0.00 1.40
3035 4571 6.229936 ACCGAGGCATTGTTCTAGTAAATA 57.770 37.500 0.00 0.00 0.00 1.40
3036 4572 5.099042 ACCGAGGCATTGTTCTAGTAAAT 57.901 39.130 0.00 0.00 0.00 1.40
3037 4573 4.546829 ACCGAGGCATTGTTCTAGTAAA 57.453 40.909 0.00 0.00 0.00 2.01
3038 4574 4.250464 CAACCGAGGCATTGTTCTAGTAA 58.750 43.478 0.00 0.00 0.00 2.24
3039 4575 3.857052 CAACCGAGGCATTGTTCTAGTA 58.143 45.455 0.00 0.00 0.00 1.82
3040 4576 2.699954 CAACCGAGGCATTGTTCTAGT 58.300 47.619 0.00 0.00 0.00 2.57
3041 4577 1.398390 GCAACCGAGGCATTGTTCTAG 59.602 52.381 0.00 0.00 0.00 2.43
3042 4578 1.271108 TGCAACCGAGGCATTGTTCTA 60.271 47.619 0.00 0.00 36.11 2.10
3043 4579 0.537143 TGCAACCGAGGCATTGTTCT 60.537 50.000 0.00 0.00 36.11 3.01
3044 4580 0.313672 TTGCAACCGAGGCATTGTTC 59.686 50.000 0.00 0.00 41.58 3.18
3045 4581 0.031994 GTTGCAACCGAGGCATTGTT 59.968 50.000 19.15 0.00 41.58 2.83
3046 4582 1.659794 GTTGCAACCGAGGCATTGT 59.340 52.632 19.15 0.00 41.58 2.71
3047 4583 1.442520 CGTTGCAACCGAGGCATTG 60.443 57.895 23.42 2.51 41.58 2.82
3048 4584 2.625823 CCGTTGCAACCGAGGCATT 61.626 57.895 23.42 0.00 41.58 3.56
3049 4585 3.055719 CCGTTGCAACCGAGGCAT 61.056 61.111 23.42 0.00 41.58 4.40
3051 4587 2.862674 TATCCCGTTGCAACCGAGGC 62.863 60.000 23.42 0.00 0.00 4.70
3052 4588 0.179056 ATATCCCGTTGCAACCGAGG 60.179 55.000 23.42 20.19 0.00 4.63
3053 4589 2.519377 TATATCCCGTTGCAACCGAG 57.481 50.000 23.42 12.30 0.00 4.63
3054 4590 2.983907 TTATATCCCGTTGCAACCGA 57.016 45.000 23.42 18.50 0.00 4.69
3055 4591 4.561735 ATTTTATATCCCGTTGCAACCG 57.438 40.909 23.42 16.77 0.00 4.44
3056 4592 8.880878 AAAATATTTTATATCCCGTTGCAACC 57.119 30.769 23.42 6.48 0.00 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.