AutoCloner

Multiple sequence alignment - TraesCS7D01G354700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS7D01G354700	chr7D	100.000	5745	0	0	1	5745	458722340	458728084	0.000000e+00	10610.0
1	TraesCS7D01G354700	chr7D	91.440	257	16	3	3	257	595665963	595665711	1.180000e-91	348.0
2	TraesCS7D01G354700	chr7B	94.398	4748	178	34	347	5058	480690799	480695494	0.000000e+00	7214.0
3	TraesCS7D01G354700	chr7B	87.207	469	40	11	4168	4623	657344607	657345068	3.070000e-142	516.0
4	TraesCS7D01G354700	chr7B	90.741	216	14	3	3904	4116	657344389	657344601	3.390000e-72	283.0
5	TraesCS7D01G354700	chr7B	91.388	209	13	3	5541	5745	480697852	480698059	1.220000e-71	281.0
6	TraesCS7D01G354700	chr7B	87.083	240	22	7	4722	4959	657345113	657345345	4.410000e-66	263.0
7	TraesCS7D01G354700	chr7B	100.000	71	0	0	5479	5549	480695485	480695555	1.300000e-26	132.0
8	TraesCS7D01G354700	chr7A	92.185	3506	187	41	395	3842	541387410	541383934	0.000000e+00	4876.0
9	TraesCS7D01G354700	chr7A	91.826	734	38	15	4305	5023	541383535	541382809	0.000000e+00	1003.0
10	TraesCS7D01G354700	chr7A	85.900	461	35	15	4175	4626	677843451	677843890	1.130000e-126	464.0
11	TraesCS7D01G354700	chr7A	82.005	389	23	16	3908	4259	541383913	541383535	2.620000e-73	287.0
12	TraesCS7D01G354700	chr7A	85.938	256	26	7	4722	4976	677843932	677844178	1.230000e-66	265.0
13	TraesCS7D01G354700	chr7A	88.770	187	15	3	3904	4087	677842177	677842360	2.080000e-54	224.0
14	TraesCS7D01G354700	chr7A	92.982	57	4	0	4385	4441	430562706	430562650	3.690000e-12	84.2
15	TraesCS7D01G354700	chr7A	95.122	41	2	0	269	309	198199476	198199436	1.340000e-06	65.8
16	TraesCS7D01G354700	chr3D	94.588	425	17	4	5057	5478	511669459	511669880	0.000000e+00	652.0
17	TraesCS7D01G354700	chr3D	91.253	423	32	3	5058	5478	587940649	587941068	6.460000e-159	571.0
18	TraesCS7D01G354700	chr3D	90.272	257	21	2	2	256	67724443	67724697	3.320000e-87	333.0
19	TraesCS7D01G354700	chr1A	91.745	424	29	4	5058	5478	33217086	33216666	8.300000e-163	584.0
20	TraesCS7D01G354700	chrUn	91.274	424	31	4	5057	5477	224682584	224682164	1.800000e-159	573.0
21	TraesCS7D01G354700	chr4D	90.780	423	35	3	5057	5478	468904566	468904147	3.890000e-156	562.0
22	TraesCS7D01G354700	chr1D	90.802	424	32	5	5059	5480	317595928	317596346	1.400000e-155	560.0
23	TraesCS7D01G354700	chr5D	90.780	423	31	5	5060	5479	556999590	557000007	5.030000e-155	558.0
24	TraesCS7D01G354700	chr5D	83.240	179	21	4	5572	5744	313145394	313145219	7.710000e-34	156.0
25	TraesCS7D01G354700	chr5D	82.927	82	13	1	4353	4433	327524416	327524497	7.980000e-09	73.1
26	TraesCS7D01G354700	chr2D	90.566	424	34	4	5058	5479	556347385	556347804	1.810000e-154	556.0
27	TraesCS7D01G354700	chr2D	82.857	105	12	6	4357	4458	6708217	6708318	7.930000e-14	89.8
28	TraesCS7D01G354700	chr2B	90.255	431	33	7	5055	5483	742698161	742698584	6.500000e-154	555.0
29	TraesCS7D01G354700	chr2B	90.310	258	21	2	1	256	643162778	643162523	9.220000e-88	335.0
30	TraesCS7D01G354700	chr3A	90.272	257	21	2	2	256	79450586	79450840	3.320000e-87	333.0
31	TraesCS7D01G354700	chr2A	89.961	259	22	3	1	257	606519068	606519324	1.190000e-86	331.0
32	TraesCS7D01G354700	chr2A	84.615	104	12	4	4357	4458	4978891	4978790	3.660000e-17	100.0
33	TraesCS7D01G354700	chr4B	89.922	258	22	3	1	256	22857362	22857617	4.290000e-86	329.0
34	TraesCS7D01G354700	chr6A	89.354	263	24	3	1	261	614646506	614646766	1.540000e-85	327.0
35	TraesCS7D01G354700	chr4A	89.098	266	24	3	1	264	25079492	25079230	5.550000e-85	326.0
36	TraesCS7D01G354700	chr5B	89.147	258	24	2	1	256	18711892	18712147	9.290000e-83	318.0
37	TraesCS7D01G354700	chr5B	81.667	180	24	4	5572	5745	360858532	360858356	2.160000e-29	141.0
38	TraesCS7D01G354700	chr5B	83.750	80	13	0	4354	4433	380817040	380817119	6.170000e-10	76.8
39	TraesCS7D01G354700	chr5B	94.737	38	2	0	272	309	347989763	347989800	6.220000e-05	60.2
40	TraesCS7D01G354700	chr5A	82.558	86	15	0	4354	4439	429170138	429170053	6.170000e-10	76.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS7D01G354700	chr7D	458722340	458728084	5744	False	10610.000000	10610	100.000000	1	5745	1	chr7D.!!$F1	5744
1	TraesCS7D01G354700	chr7B	480690799	480698059	7260	False	2542.333333	7214	95.262000	347	5745	3	chr7B.!!$F1	5398
2	TraesCS7D01G354700	chr7B	657344389	657345345	956	False	354.000000	516	88.343667	3904	4959	3	chr7B.!!$F2	1055
3	TraesCS7D01G354700	chr7A	541382809	541387410	4601	True	2055.333333	4876	88.672000	395	5023	3	chr7A.!!$R3	4628
4	TraesCS7D01G354700	chr7A	677842177	677844178	2001	False	317.666667	464	86.869333	3904	4976	3	chr7A.!!$F1	1072

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
942	1012	0.105709	TGCTGATCGGATAGGTGGGA	60.106	55.0	5.48	0.00	4.37	F
1719	1801	0.534203	GCAACCTCGTCAACCTCCAA	60.534	55.0	0.00	0.00	3.53	F
2545	2627	1.101049	CAACAACAGCTTCACGGGGT	61.101	55.0	0.00	0.00	4.95	F
3214	3296	0.174617	GCTCGAGGGTGAGAAGAAGG	59.825	60.0	15.58	38.28	3.46	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1845	1927	0.694771	TGGTGATCTTCTGCAGCCTT	59.305	50.0	9.47	0.00	0.00	4.35	R
2985	3067	0.599204	TCTTGAAGAACGGCGTCACC	60.599	55.0	15.17	5.92	34.69	4.02	R
3348	3430	1.169577	CAGCTCTGTACACGACTCCT	58.830	55.0	0.00	0.00	0.00	3.69	R
5067	6281	0.034059	AGTGAGGTCGGTCAGCAAAG	59.966	55.0	0.00	0.00	0.00	2.77	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
25	26	8.862550	CCTCCGTTTTTATTTAGTCTACGTAT	57.137	34.615	0.00	0.00	0.00	3.06
26	27	9.305925	CCTCCGTTTTTATTTAGTCTACGTATT	57.694	33.333	0.00	0.00	0.00	1.89
36	37	8.868635	ATTTAGTCTACGTATTAGCTTTGGTC	57.131	34.615	0.00	0.00	0.00	4.02
37	38	5.909621	AGTCTACGTATTAGCTTTGGTCA	57.090	39.130	0.00	0.00	0.00	4.02
38	39	6.276832	AGTCTACGTATTAGCTTTGGTCAA	57.723	37.500	0.00	0.00	0.00	3.18
39	40	6.694447	AGTCTACGTATTAGCTTTGGTCAAA	58.306	36.000	0.00	0.00	0.00	2.69
51	52	5.072040	CTTTGGTCAAAGTCAAGGTTTGT	57.928	39.130	13.58	0.00	42.02	2.83
52	53	6.202516	CTTTGGTCAAAGTCAAGGTTTGTA	57.797	37.500	13.58	0.00	42.02	2.41
53	54	6.591750	TTTGGTCAAAGTCAAGGTTTGTAA	57.408	33.333	0.00	0.00	36.47	2.41
54	55	6.591750	TTGGTCAAAGTCAAGGTTTGTAAA	57.408	33.333	0.00	0.00	36.47	2.01
55	56	5.956642	TGGTCAAAGTCAAGGTTTGTAAAC	58.043	37.500	0.00	0.00	36.47	2.01
56	57	5.712917	TGGTCAAAGTCAAGGTTTGTAAACT	59.287	36.000	7.36	0.00	38.89	2.66
57	58	6.209788	TGGTCAAAGTCAAGGTTTGTAAACTT	59.790	34.615	7.36	0.00	38.89	2.66
58	59	7.094631	GGTCAAAGTCAAGGTTTGTAAACTTT	58.905	34.615	7.36	3.58	38.53	2.66
140	141	8.207521	TCATTATTGAATGTACTTTCGCATCA	57.792	30.769	14.67	4.28	42.71	3.07
141	142	8.839343	TCATTATTGAATGTACTTTCGCATCAT	58.161	29.630	14.67	5.95	42.71	2.45
197	198	7.980742	GTTTTCGATAAACTTGGTCAAACTT	57.019	32.000	12.83	0.00	0.00	2.66
198	199	8.402326	GTTTTCGATAAACTTGGTCAAACTTT	57.598	30.769	12.83	0.00	0.00	2.66
199	200	9.505995	GTTTTCGATAAACTTGGTCAAACTTTA	57.494	29.630	12.83	0.00	0.00	1.85
200	201	9.505995	TTTTCGATAAACTTGGTCAAACTTTAC	57.494	29.630	0.00	0.00	0.00	2.01
201	202	6.879962	TCGATAAACTTGGTCAAACTTTACG	58.120	36.000	0.00	0.00	0.00	3.18
202	203	6.700960	TCGATAAACTTGGTCAAACTTTACGA	59.299	34.615	0.00	0.00	0.00	3.43
203	204	7.224362	TCGATAAACTTGGTCAAACTTTACGAA	59.776	33.333	0.00	0.00	0.00	3.85
204	205	7.529519	CGATAAACTTGGTCAAACTTTACGAAG	59.470	37.037	0.00	0.00	37.43	3.79
234	235	9.713740	GACTTCAGTCAAATTTAATATGCAGAG	57.286	33.333	1.86	0.00	44.18	3.35
235	236	9.236006	ACTTCAGTCAAATTTAATATGCAGAGT	57.764	29.630	0.00	0.00	0.00	3.24
250	251	5.873179	TGCAGAGTAAATAAAAACGGAGG	57.127	39.130	0.00	0.00	0.00	4.30
251	252	4.698304	TGCAGAGTAAATAAAAACGGAGGG	59.302	41.667	0.00	0.00	0.00	4.30
252	253	4.939439	GCAGAGTAAATAAAAACGGAGGGA	59.061	41.667	0.00	0.00	0.00	4.20
253	254	5.064834	GCAGAGTAAATAAAAACGGAGGGAG	59.935	44.000	0.00	0.00	0.00	4.30
254	255	6.171213	CAGAGTAAATAAAAACGGAGGGAGT	58.829	40.000	0.00	0.00	0.00	3.85
255	256	7.325694	CAGAGTAAATAAAAACGGAGGGAGTA	58.674	38.462	0.00	0.00	0.00	2.59
256	257	7.985752	CAGAGTAAATAAAAACGGAGGGAGTAT	59.014	37.037	0.00	0.00	0.00	2.12
257	258	9.205513	AGAGTAAATAAAAACGGAGGGAGTATA	57.794	33.333	0.00	0.00	0.00	1.47
258	259	9.993454	GAGTAAATAAAAACGGAGGGAGTATAT	57.007	33.333	0.00	0.00	0.00	0.86
259	260	9.993454	AGTAAATAAAAACGGAGGGAGTATATC	57.007	33.333	0.00	0.00	0.00	1.63
260	261	9.768662	GTAAATAAAAACGGAGGGAGTATATCA	57.231	33.333	0.00	0.00	0.00	2.15
261	262	8.672823	AAATAAAAACGGAGGGAGTATATCAC	57.327	34.615	0.00	0.00	0.00	3.06
263	264	5.952347	AAAACGGAGGGAGTATATCACTT	57.048	39.130	0.00	0.00	43.76	3.16
264	265	4.939052	AACGGAGGGAGTATATCACTTG	57.061	45.455	0.00	0.00	43.76	3.16
265	266	4.180377	ACGGAGGGAGTATATCACTTGA	57.820	45.455	0.00	0.00	43.76	3.02
266	267	4.742012	ACGGAGGGAGTATATCACTTGAT	58.258	43.478	0.00	0.00	43.76	2.57
267	268	4.767928	ACGGAGGGAGTATATCACTTGATC	59.232	45.833	0.00	0.00	43.76	2.92
268	269	4.767409	CGGAGGGAGTATATCACTTGATCA	59.233	45.833	0.00	0.00	43.76	2.92
269	270	5.243954	CGGAGGGAGTATATCACTTGATCAA	59.756	44.000	8.12	8.12	43.76	2.57
270	271	6.571344	CGGAGGGAGTATATCACTTGATCAAG	60.571	46.154	29.74	29.74	43.76	3.02
271	272	6.495181	GGAGGGAGTATATCACTTGATCAAGA	59.505	42.308	36.15	19.31	43.76	3.02
272	273	7.296628	AGGGAGTATATCACTTGATCAAGAC	57.703	40.000	36.15	23.66	39.23	3.01
273	274	7.072562	AGGGAGTATATCACTTGATCAAGACT	58.927	38.462	36.15	27.24	39.23	3.24
274	275	7.566879	AGGGAGTATATCACTTGATCAAGACTT	59.433	37.037	36.15	22.45	39.23	3.01
275	276	7.655328	GGGAGTATATCACTTGATCAAGACTTG	59.345	40.741	36.15	25.06	40.79	3.16
276	277	7.655328	GGAGTATATCACTTGATCAAGACTTGG	59.345	40.741	36.15	20.58	40.79	3.61
277	278	8.083828	AGTATATCACTTGATCAAGACTTGGT	57.916	34.615	36.15	23.98	40.79	3.67
278	279	8.543774	AGTATATCACTTGATCAAGACTTGGTT	58.456	33.333	36.15	18.89	40.79	3.67
279	280	5.954296	ATCACTTGATCAAGACTTGGTTG	57.046	39.130	36.15	23.18	40.79	3.77
280	281	5.034852	TCACTTGATCAAGACTTGGTTGA	57.965	39.130	36.15	24.79	40.79	3.18
281	282	5.436175	TCACTTGATCAAGACTTGGTTGAA	58.564	37.500	36.15	12.91	40.79	2.69
282	283	6.064060	TCACTTGATCAAGACTTGGTTGAAT	58.936	36.000	36.15	11.13	40.79	2.57
283	284	6.205464	TCACTTGATCAAGACTTGGTTGAATC	59.795	38.462	36.15	10.38	40.79	2.52
284	285	6.206243	CACTTGATCAAGACTTGGTTGAATCT	59.794	38.462	36.15	10.52	40.79	2.40
285	286	6.429385	ACTTGATCAAGACTTGGTTGAATCTC	59.571	38.462	36.15	0.00	40.79	2.75
286	287	5.868454	TGATCAAGACTTGGTTGAATCTCA	58.132	37.500	15.13	0.00	37.46	3.27
287	288	5.936372	TGATCAAGACTTGGTTGAATCTCAG	59.064	40.000	15.13	0.00	37.46	3.35
288	289	5.296151	TCAAGACTTGGTTGAATCTCAGT	57.704	39.130	15.13	0.00	30.89	3.41
289	290	5.300752	TCAAGACTTGGTTGAATCTCAGTC	58.699	41.667	15.13	1.49	30.89	3.51
290	291	3.919216	AGACTTGGTTGAATCTCAGTCG	58.081	45.455	3.68	0.00	0.00	4.18
291	292	3.574396	AGACTTGGTTGAATCTCAGTCGA	59.426	43.478	3.68	0.00	0.00	4.20
292	293	3.654414	ACTTGGTTGAATCTCAGTCGAC	58.346	45.455	7.70	7.70	0.00	4.20
293	294	3.322254	ACTTGGTTGAATCTCAGTCGACT	59.678	43.478	13.58	13.58	31.13	4.18
294	295	4.523173	ACTTGGTTGAATCTCAGTCGACTA	59.477	41.667	19.57	2.81	31.13	2.59
295	296	5.010719	ACTTGGTTGAATCTCAGTCGACTAA	59.989	40.000	19.57	1.94	31.34	2.24
296	297	5.060662	TGGTTGAATCTCAGTCGACTAAG	57.939	43.478	19.57	14.47	31.13	2.18
297	298	4.765339	TGGTTGAATCTCAGTCGACTAAGA	59.235	41.667	20.63	20.63	31.13	2.10
298	299	5.096849	GGTTGAATCTCAGTCGACTAAGAC	58.903	45.833	20.77	9.76	41.23	3.01
299	300	4.966965	TGAATCTCAGTCGACTAAGACC	57.033	45.455	20.77	15.22	41.83	3.85
300	301	4.590918	TGAATCTCAGTCGACTAAGACCT	58.409	43.478	20.77	10.96	41.83	3.85
301	302	5.742063	TGAATCTCAGTCGACTAAGACCTA	58.258	41.667	20.77	7.02	41.83	3.08
302	303	6.178324	TGAATCTCAGTCGACTAAGACCTAA	58.822	40.000	20.77	4.52	41.83	2.69
303	304	6.093771	TGAATCTCAGTCGACTAAGACCTAAC	59.906	42.308	20.77	10.56	41.83	2.34
304	305	4.260170	TCTCAGTCGACTAAGACCTAACC	58.740	47.826	19.57	0.00	41.83	2.85
305	306	4.008330	CTCAGTCGACTAAGACCTAACCA	58.992	47.826	19.57	0.00	41.83	3.67
306	307	3.755378	TCAGTCGACTAAGACCTAACCAC	59.245	47.826	19.57	0.00	41.83	4.16
307	308	3.504906	CAGTCGACTAAGACCTAACCACA	59.495	47.826	19.57	0.00	41.83	4.17
308	309	3.505293	AGTCGACTAAGACCTAACCACAC	59.495	47.826	18.46	0.00	41.83	3.82
309	310	3.254166	GTCGACTAAGACCTAACCACACA	59.746	47.826	8.70	0.00	35.22	3.72
310	311	4.082354	GTCGACTAAGACCTAACCACACAT	60.082	45.833	8.70	0.00	35.22	3.21
311	312	4.525487	TCGACTAAGACCTAACCACACATT	59.475	41.667	0.00	0.00	0.00	2.71
312	313	5.011329	TCGACTAAGACCTAACCACACATTT	59.989	40.000	0.00	0.00	0.00	2.32
313	314	5.699458	CGACTAAGACCTAACCACACATTTT	59.301	40.000	0.00	0.00	0.00	1.82
314	315	6.204108	CGACTAAGACCTAACCACACATTTTT	59.796	38.462	0.00	0.00	0.00	1.94
337	338	8.830201	TTTTTATTACTGCTCACAAAATGCAT	57.170	26.923	0.00	0.00	36.07	3.96
338	339	8.830201	TTTTATTACTGCTCACAAAATGCATT	57.170	26.923	5.99	5.99	36.07	3.56
339	340	8.830201	TTTATTACTGCTCACAAAATGCATTT	57.170	26.923	18.99	18.99	36.07	2.32
352	353	6.930667	AAAATGCATTTGAGCTCAGTTTTT	57.069	29.167	24.74	13.48	34.99	1.94
354	355	4.924305	TGCATTTGAGCTCAGTTTTTCT	57.076	36.364	17.43	0.00	34.99	2.52
359	360	6.292008	GCATTTGAGCTCAGTTTTTCTTCAAC	60.292	38.462	17.43	0.00	0.00	3.18
361	362	5.490139	TGAGCTCAGTTTTTCTTCAACAG	57.510	39.130	13.74	0.00	0.00	3.16
363	364	5.163723	TGAGCTCAGTTTTTCTTCAACAGTG	60.164	40.000	13.74	0.00	0.00	3.66
372	373	3.541996	TCTTCAACAGTGAGTGCAAGA	57.458	42.857	0.00	3.86	34.49	3.02
379	380	4.782019	ACAGTGAGTGCAAGAAAACAAA	57.218	36.364	0.00	0.00	0.00	2.83
381	382	5.104374	ACAGTGAGTGCAAGAAAACAAATG	58.896	37.500	0.00	0.00	0.00	2.32
382	383	4.026310	CAGTGAGTGCAAGAAAACAAATGC	60.026	41.667	0.00	0.00	39.22	3.56
426	432	2.030805	GCAAGACGAGACCAAAATTGCT	60.031	45.455	0.00	0.00	38.73	3.91
520	530	1.375551	CACCCGTAGCCACCATTAAC	58.624	55.000	0.00	0.00	0.00	2.01
531	541	0.822164	ACCATTAACTACTCGCCGCT	59.178	50.000	0.00	0.00	0.00	5.52
538	548	3.432051	CTACTCGCCGCTCCCAAGG	62.432	68.421	0.00	0.00	0.00	3.61
558	568	0.749649	AGCGCAGATAAGACCAGGAG	59.250	55.000	11.47	0.00	0.00	3.69
586	599	3.261643	AGGTTTTACTACCACTAACCCCG	59.738	47.826	0.00	0.00	40.82	5.73
591	604	3.111741	ACTACCACTAACCCCGATTCT	57.888	47.619	0.00	0.00	0.00	2.40
626	639	7.982224	AGCTAACCCGAAGATAAAAATACAAC	58.018	34.615	0.00	0.00	0.00	3.32
627	640	7.066645	AGCTAACCCGAAGATAAAAATACAACC	59.933	37.037	0.00	0.00	0.00	3.77
632	645	6.072397	CCCGAAGATAAAAATACAACCACACA	60.072	38.462	0.00	0.00	0.00	3.72
634	659	6.518395	CGAAGATAAAAATACAACCACACACG	59.482	38.462	0.00	0.00	0.00	4.49
658	683	1.762957	CCGAGGAGAGAGAGAGAGAGT	59.237	57.143	0.00	0.00	0.00	3.24
660	685	2.168521	CGAGGAGAGAGAGAGAGAGTGT	59.831	54.545	0.00	0.00	0.00	3.55
662	687	2.912956	AGGAGAGAGAGAGAGAGTGTGT	59.087	50.000	0.00	0.00	0.00	3.72
694	719	0.317854	GCGTGTGTTCAAAAGAGCCC	60.318	55.000	0.00	0.00	0.00	5.19
818	862	2.348998	CCTCACTGGTCACTGCCC	59.651	66.667	0.00	0.00	0.00	5.36
819	863	2.348998	CTCACTGGTCACTGCCCC	59.651	66.667	0.00	0.00	0.00	5.80
820	864	3.596066	CTCACTGGTCACTGCCCCG	62.596	68.421	0.00	0.00	0.00	5.73
856	902	1.538629	TCCACTCCCACATGCCTCA	60.539	57.895	0.00	0.00	0.00	3.86
873	919	0.948816	TCACCATCCCCCATCTCCTA	59.051	55.000	0.00	0.00	0.00	2.94
879	925	0.185416	TCCCCCATCTCCTACTCGTC	59.815	60.000	0.00	0.00	0.00	4.20
880	926	1.173444	CCCCCATCTCCTACTCGTCG	61.173	65.000	0.00	0.00	0.00	5.12
942	1012	0.105709	TGCTGATCGGATAGGTGGGA	60.106	55.000	5.48	0.00	0.00	4.37
943	1013	1.048601	GCTGATCGGATAGGTGGGAA	58.951	55.000	5.48	0.00	0.00	3.97
963	1034	4.707030	AAAGGAACGTTCGTTTCCTTTT	57.293	36.364	32.28	17.02	40.11	2.27
964	1035	4.707030	AAGGAACGTTCGTTTCCTTTTT	57.293	36.364	25.97	6.13	34.85	1.94
971	1053	6.621737	ACGTTCGTTTCCTTTTTCTTTTTC	57.378	33.333	0.00	0.00	0.00	2.29
976	1058	4.106909	GTTTCCTTTTTCTTTTTCGGCGA	58.893	39.130	4.99	4.99	0.00	5.54
1105	1187	3.360340	GCAAGGCGCTGCTGTCTT	61.360	61.111	13.86	1.45	39.34	3.01
1584	1666	4.749310	CTCCAGCAGCTCCGCGTT	62.749	66.667	4.92	0.00	36.85	4.84
1618	1700	1.520666	CTGTCGGGCCTTATTCCGT	59.479	57.895	0.84	0.00	45.79	4.69
1719	1801	0.534203	GCAACCTCGTCAACCTCCAA	60.534	55.000	0.00	0.00	0.00	3.53
2361	2443	4.961511	GTGGCCGACTGCGTGTCA	62.962	66.667	0.00	0.00	45.60	3.58
2472	2554	1.374252	CTCGAACAGGTTCACCGGG	60.374	63.158	6.32	0.00	42.08	5.73
2545	2627	1.101049	CAACAACAGCTTCACGGGGT	61.101	55.000	0.00	0.00	0.00	4.95
2958	3040	1.546029	CTGACGTCCCTCAACATCTCA	59.454	52.381	14.12	0.00	0.00	3.27
2960	3042	3.361786	TGACGTCCCTCAACATCTCATA	58.638	45.455	14.12	0.00	0.00	2.15
3114	3196	0.528470	CTCTGAAGACCGTCAGGACC	59.472	60.000	11.83	0.00	44.40	4.46
3174	3256	1.204704	CTGCTTGTCGTGGTCTGGATA	59.795	52.381	0.00	0.00	0.00	2.59
3211	3293	0.681564	GAGGCTCGAGGGTGAGAAGA	60.682	60.000	15.58	0.00	38.28	2.87
3212	3294	0.251832	AGGCTCGAGGGTGAGAAGAA	60.252	55.000	15.58	0.00	38.28	2.52
3214	3296	0.174617	GCTCGAGGGTGAGAAGAAGG	59.825	60.000	15.58	0.00	38.28	3.46
3299	3381	1.581934	CTCAACTTCTGCGTGGACAA	58.418	50.000	0.00	0.00	0.00	3.18
3438	3520	3.587933	GAGGAGCCGATCGACGCT	61.588	66.667	18.66	17.81	41.07	5.07
3574	3656	1.323271	TAACCTGCAGGAGCTCCTCG	61.323	60.000	39.19	26.03	46.65	4.63
3618	3700	0.389426	ACACACGGTACAAGATCGCC	60.389	55.000	0.00	0.00	0.00	5.54
3624	3706	2.103538	TACAAGATCGCCGTCGGC	59.896	61.111	26.69	26.69	46.75	5.54
3702	3784	3.243839	GGGATGTCAAGTGCAACAACATT	60.244	43.478	0.00	0.00	41.43	2.71
3836	3918	0.957888	GCTCCAGGCAAGTCACTTCC	60.958	60.000	0.00	0.00	41.35	3.46
3837	3919	0.397941	CTCCAGGCAAGTCACTTCCA	59.602	55.000	8.27	0.00	0.00	3.53
3838	3920	0.108585	TCCAGGCAAGTCACTTCCAC	59.891	55.000	8.27	0.00	0.00	4.02
3839	3921	0.109342	CCAGGCAAGTCACTTCCACT	59.891	55.000	8.27	0.00	0.00	4.00
3840	3922	1.347707	CCAGGCAAGTCACTTCCACTA	59.652	52.381	8.27	0.00	0.00	2.74
3841	3923	2.224523	CCAGGCAAGTCACTTCCACTAA	60.225	50.000	8.27	0.00	0.00	2.24
3842	3924	3.070018	CAGGCAAGTCACTTCCACTAAG	58.930	50.000	8.27	0.00	41.33	2.18
3843	3925	2.039084	AGGCAAGTCACTTCCACTAAGG	59.961	50.000	8.27	0.00	39.73	2.69
3844	3926	1.807142	GCAAGTCACTTCCACTAAGGC	59.193	52.381	0.00	0.00	39.73	4.35
3876	3958	9.307121	CTTGTGTTTATCTCCTCTTATAGTGTG	57.693	37.037	0.00	0.00	0.00	3.82
4001	4083	4.672409	GTGAATTATTTGGGTAGTGCTGC	58.328	43.478	0.00	0.00	0.00	5.25
4075	4171	4.521146	GTTCTTCATCCATGACCATGTCT	58.479	43.478	8.93	0.00	36.36	3.41
4126	5282	9.263446	ACTAGGTATTAACTGACATTGTCCTTA	57.737	33.333	14.05	7.05	0.00	2.69
4190	5365	1.852942	TCACTGAAGCACGTTGACTC	58.147	50.000	0.00	0.00	0.00	3.36
4216	5392	3.688272	CTGTTGATTCCAATGCTTAGCG	58.312	45.455	0.00	0.00	34.39	4.26
4242	5418	5.826586	TCACTGTGTTGATTTGCGTAATTT	58.173	33.333	7.79	0.00	0.00	1.82
4259	5435	8.620416	TGCGTAATTTATACTGAAATGAAGCAT	58.380	29.630	3.59	0.00	38.77	3.79
4350	5530	0.741915	TGGTTTGACGTTTGCCTTCC	59.258	50.000	0.00	0.00	0.00	3.46
4618	5805	0.036010	CCATCTTCTGCGTGAACCCT	60.036	55.000	0.00	0.00	0.00	4.34
4880	6069	3.812882	GCTAGCTTTGGTTAGGGGTTTCA	60.813	47.826	7.70	0.00	0.00	2.69
4939	6130	5.402398	GGAACTTGAATGGGAAATTTCTCG	58.598	41.667	17.42	2.77	0.00	4.04
4955	6148	6.679327	ATTTCTCGGTTATTAGTTTGCTCC	57.321	37.500	0.00	0.00	0.00	4.70
4962	6155	1.359848	ATTAGTTTGCTCCTGCGACG	58.640	50.000	0.00	0.00	43.34	5.12
4996	6199	4.041198	CCTCCCAGTTTACAGTTTACTCCA	59.959	45.833	0.00	0.00	0.00	3.86
5002	6205	7.138736	CCAGTTTACAGTTTACTCCACATTTG	58.861	38.462	0.00	0.00	0.00	2.32
5009	6212	4.649218	AGTTTACTCCACATTTGGCAGTTT	59.351	37.500	7.88	0.00	43.56	2.66
5058	6272	5.191059	GCTATTAAAAGAACATCTCACGCG	58.809	41.667	3.53	3.53	0.00	6.01
5059	6273	4.600012	ATTAAAAGAACATCTCACGCGG	57.400	40.909	12.47	0.00	0.00	6.46
5060	6274	2.163818	AAAAGAACATCTCACGCGGA	57.836	45.000	12.47	3.82	0.00	5.54
5061	6275	2.163818	AAAGAACATCTCACGCGGAA	57.836	45.000	12.47	0.00	0.00	4.30
5062	6276	2.163818	AAGAACATCTCACGCGGAAA	57.836	45.000	12.47	0.00	0.00	3.13
5063	6277	1.429463	AGAACATCTCACGCGGAAAC	58.571	50.000	12.47	0.00	0.00	2.78
5064	6278	1.000955	AGAACATCTCACGCGGAAACT	59.999	47.619	12.47	0.00	0.00	2.66
5065	6279	1.126846	GAACATCTCACGCGGAAACTG	59.873	52.381	12.47	4.80	0.00	3.16
5066	6280	1.291877	ACATCTCACGCGGAAACTGC	61.292	55.000	12.47	0.00	0.00	4.40
5067	6281	1.741770	ATCTCACGCGGAAACTGCC	60.742	57.895	12.47	0.00	0.00	4.85
5068	6282	2.172483	ATCTCACGCGGAAACTGCCT	62.172	55.000	12.47	0.00	0.00	4.75
5069	6283	1.961277	CTCACGCGGAAACTGCCTT	60.961	57.895	12.47	0.00	0.00	4.35
5070	6284	1.507141	CTCACGCGGAAACTGCCTTT	61.507	55.000	12.47	0.00	0.00	3.11
5071	6285	1.370414	CACGCGGAAACTGCCTTTG	60.370	57.895	12.47	0.00	0.00	2.77
5072	6286	2.429069	CGCGGAAACTGCCTTTGC	60.429	61.111	0.00	0.00	38.26	3.68
5073	6287	2.908073	CGCGGAAACTGCCTTTGCT	61.908	57.895	0.00	0.00	38.71	3.91
5074	6288	1.372128	GCGGAAACTGCCTTTGCTG	60.372	57.895	0.00	0.00	41.75	4.41
5075	6289	1.795170	GCGGAAACTGCCTTTGCTGA	61.795	55.000	0.00	0.00	39.51	4.26
5076	6290	0.040067	CGGAAACTGCCTTTGCTGAC	60.040	55.000	0.00	0.00	39.51	3.51
5077	6291	0.315251	GGAAACTGCCTTTGCTGACC	59.685	55.000	0.00	0.00	39.51	4.02
5078	6292	0.040067	GAAACTGCCTTTGCTGACCG	60.040	55.000	0.00	0.00	39.51	4.79
5079	6293	0.465460	AAACTGCCTTTGCTGACCGA	60.465	50.000	0.00	0.00	39.51	4.69
5080	6294	1.166531	AACTGCCTTTGCTGACCGAC	61.167	55.000	0.00	0.00	39.51	4.79
5081	6295	2.281484	TGCCTTTGCTGACCGACC	60.281	61.111	0.00	0.00	38.71	4.79
5082	6296	2.032681	GCCTTTGCTGACCGACCT	59.967	61.111	0.00	0.00	33.53	3.85
5083	6297	2.035442	GCCTTTGCTGACCGACCTC	61.035	63.158	0.00	0.00	33.53	3.85
5084	6298	1.371183	CCTTTGCTGACCGACCTCA	59.629	57.895	0.00	0.00	0.00	3.86
5085	6299	0.951040	CCTTTGCTGACCGACCTCAC	60.951	60.000	0.00	0.00	0.00	3.51
5086	6300	0.034059	CTTTGCTGACCGACCTCACT	59.966	55.000	0.00	0.00	0.00	3.41
5087	6301	0.249868	TTTGCTGACCGACCTCACTG	60.250	55.000	0.00	0.00	0.00	3.66
5088	6302	2.099652	TTGCTGACCGACCTCACTGG	62.100	60.000	0.00	0.00	42.93	4.00
5089	6303	2.276116	GCTGACCGACCTCACTGGA	61.276	63.158	0.00	0.00	39.71	3.86
5090	6304	1.886585	CTGACCGACCTCACTGGAG	59.113	63.158	0.00	0.00	41.02	3.86
5100	6314	2.503895	CTCACTGGAGGCCTTCAAAT	57.496	50.000	16.56	3.01	37.51	2.32
5101	6315	2.800250	CTCACTGGAGGCCTTCAAATT	58.200	47.619	16.56	0.00	37.51	1.82
5102	6316	2.751806	CTCACTGGAGGCCTTCAAATTC	59.248	50.000	16.56	0.00	37.51	2.17
5103	6317	2.108075	TCACTGGAGGCCTTCAAATTCA	59.892	45.455	16.56	0.00	0.00	2.57
5104	6318	2.892852	CACTGGAGGCCTTCAAATTCAA	59.107	45.455	16.56	0.00	0.00	2.69
5105	6319	3.321682	CACTGGAGGCCTTCAAATTCAAA	59.678	43.478	16.56	0.00	0.00	2.69
5106	6320	3.966665	ACTGGAGGCCTTCAAATTCAAAA	59.033	39.130	16.56	0.00	0.00	2.44
5107	6321	4.594491	ACTGGAGGCCTTCAAATTCAAAAT	59.406	37.500	16.56	0.00	0.00	1.82
5108	6322	5.072193	ACTGGAGGCCTTCAAATTCAAAATT	59.928	36.000	16.56	0.00	0.00	1.82
5109	6323	5.550290	TGGAGGCCTTCAAATTCAAAATTC	58.450	37.500	12.80	0.00	0.00	2.17
5110	6324	5.071519	TGGAGGCCTTCAAATTCAAAATTCA	59.928	36.000	12.80	0.00	0.00	2.57
5111	6325	5.997129	GGAGGCCTTCAAATTCAAAATTCAA	59.003	36.000	6.77	0.00	0.00	2.69
5112	6326	6.486320	GGAGGCCTTCAAATTCAAAATTCAAA	59.514	34.615	6.77	0.00	0.00	2.69
5113	6327	7.175467	GGAGGCCTTCAAATTCAAAATTCAAAT	59.825	33.333	6.77	0.00	0.00	2.32
5114	6328	8.467963	AGGCCTTCAAATTCAAAATTCAAATT	57.532	26.923	0.00	0.00	0.00	1.82
5115	6329	8.916062	AGGCCTTCAAATTCAAAATTCAAATTT	58.084	25.926	0.00	0.00	40.15	1.82
5116	6330	9.184062	GGCCTTCAAATTCAAAATTCAAATTTC	57.816	29.630	0.00	0.00	37.62	2.17
5117	6331	9.733219	GCCTTCAAATTCAAAATTCAAATTTCA	57.267	25.926	1.43	0.00	37.62	2.69
5186	6400	9.219603	ACATATATACATGAAGGCATAACACAC	57.780	33.333	0.00	0.00	32.27	3.82
5187	6401	9.218440	CATATATACATGAAGGCATAACACACA	57.782	33.333	0.00	0.00	32.27	3.72
5188	6402	9.964354	ATATATACATGAAGGCATAACACACAT	57.036	29.630	0.00	0.00	32.27	3.21
5189	6403	4.707030	ACATGAAGGCATAACACACATG	57.293	40.909	0.00	0.00	39.27	3.21
5190	6404	4.081406	ACATGAAGGCATAACACACATGT	58.919	39.130	0.00	0.00	40.84	3.21
5191	6405	4.082625	ACATGAAGGCATAACACACATGTG	60.083	41.667	24.25	24.25	42.90	3.21
5192	6406	4.082625	CATGAAGGCATAACACACATGTGT	60.083	41.667	25.76	25.76	46.35	3.72
5193	6407	6.126914	CATGAAGGCATAACACACATGTGTG	61.127	44.000	43.01	43.01	44.88	3.82
5207	6421	4.685628	CACATGTGTGTAAATTTTCAGGGC	59.314	41.667	18.03	0.00	40.96	5.19
5208	6422	4.343526	ACATGTGTGTAAATTTTCAGGGCA	59.656	37.500	0.00	0.00	36.63	5.36
5209	6423	5.163364	ACATGTGTGTAAATTTTCAGGGCAA	60.163	36.000	0.00	0.00	36.63	4.52
5210	6424	5.344743	TGTGTGTAAATTTTCAGGGCAAA	57.655	34.783	0.00	0.00	0.00	3.68
5211	6425	5.734720	TGTGTGTAAATTTTCAGGGCAAAA	58.265	33.333	0.00	0.00	0.00	2.44
5212	6426	6.352516	TGTGTGTAAATTTTCAGGGCAAAAT	58.647	32.000	0.00	0.00	37.53	1.82
5213	6427	7.500992	TGTGTGTAAATTTTCAGGGCAAAATA	58.499	30.769	0.00	0.00	35.35	1.40
5214	6428	7.439655	TGTGTGTAAATTTTCAGGGCAAAATAC	59.560	33.333	0.00	0.00	35.35	1.89
5215	6429	6.642950	TGTGTAAATTTTCAGGGCAAAATACG	59.357	34.615	0.00	0.00	35.35	3.06
5216	6430	6.643360	GTGTAAATTTTCAGGGCAAAATACGT	59.357	34.615	0.00	0.00	35.35	3.57
5217	6431	7.170151	GTGTAAATTTTCAGGGCAAAATACGTT	59.830	33.333	0.00	0.00	35.35	3.99
5218	6432	6.538189	AAATTTTCAGGGCAAAATACGTTG	57.462	33.333	0.00	0.00	35.35	4.10
5219	6433	4.920640	TTTTCAGGGCAAAATACGTTGA	57.079	36.364	0.00	0.00	0.00	3.18
5220	6434	4.920640	TTTCAGGGCAAAATACGTTGAA	57.079	36.364	0.00	0.00	0.00	2.69
5221	6435	4.920640	TTCAGGGCAAAATACGTTGAAA	57.079	36.364	0.00	0.00	0.00	2.69
5222	6436	5.461032	TTCAGGGCAAAATACGTTGAAAT	57.539	34.783	0.00	0.00	0.00	2.17
5223	6437	4.804108	TCAGGGCAAAATACGTTGAAATG	58.196	39.130	0.00	0.00	0.00	2.32
5224	6438	4.520874	TCAGGGCAAAATACGTTGAAATGA	59.479	37.500	0.00	0.00	0.00	2.57
5225	6439	4.858692	CAGGGCAAAATACGTTGAAATGAG	59.141	41.667	0.00	0.00	0.00	2.90
5226	6440	4.082245	AGGGCAAAATACGTTGAAATGAGG	60.082	41.667	0.00	0.00	0.00	3.86
5227	6441	4.173256	GGCAAAATACGTTGAAATGAGGG	58.827	43.478	0.00	0.00	0.00	4.30
5228	6442	4.082463	GGCAAAATACGTTGAAATGAGGGA	60.082	41.667	0.00	0.00	0.00	4.20
5229	6443	5.394115	GGCAAAATACGTTGAAATGAGGGAT	60.394	40.000	0.00	0.00	0.00	3.85
5230	6444	5.516339	GCAAAATACGTTGAAATGAGGGATG	59.484	40.000	0.00	0.00	0.00	3.51
5231	6445	6.620678	CAAAATACGTTGAAATGAGGGATGT	58.379	36.000	0.00	0.00	0.00	3.06
5232	6446	5.818136	AATACGTTGAAATGAGGGATGTG	57.182	39.130	0.00	0.00	0.00	3.21
5233	6447	1.812571	ACGTTGAAATGAGGGATGTGC	59.187	47.619	0.00	0.00	0.00	4.57
5234	6448	1.811965	CGTTGAAATGAGGGATGTGCA	59.188	47.619	0.00	0.00	0.00	4.57
5235	6449	2.228582	CGTTGAAATGAGGGATGTGCAA	59.771	45.455	0.00	0.00	0.00	4.08
5236	6450	3.305267	CGTTGAAATGAGGGATGTGCAAA	60.305	43.478	0.00	0.00	0.00	3.68
5237	6451	4.630111	GTTGAAATGAGGGATGTGCAAAA	58.370	39.130	0.00	0.00	0.00	2.44
5238	6452	4.952071	TGAAATGAGGGATGTGCAAAAA	57.048	36.364	0.00	0.00	0.00	1.94
5261	6475	8.628882	AAAAGACAAATATGGCGCTATTTAAC	57.371	30.769	12.84	9.79	40.62	2.01
5262	6476	5.985781	AGACAAATATGGCGCTATTTAACG	58.014	37.500	12.84	4.29	40.62	3.18
5276	6490	7.949186	CGCTATTTAACGCATGATACTATTCA	58.051	34.615	0.00	0.00	0.00	2.57
5277	6491	8.595533	CGCTATTTAACGCATGATACTATTCAT	58.404	33.333	0.00	0.00	36.79	2.57
5278	6492	9.907576	GCTATTTAACGCATGATACTATTCATC	57.092	33.333	0.00	0.00	34.09	2.92
5281	6495	8.902540	TTTAACGCATGATACTATTCATCCTT	57.097	30.769	0.00	0.00	34.09	3.36
5282	6496	8.902540	TTAACGCATGATACTATTCATCCTTT	57.097	30.769	0.00	0.00	34.09	3.11
5283	6497	7.426929	AACGCATGATACTATTCATCCTTTC	57.573	36.000	0.00	0.00	34.09	2.62
5284	6498	6.524734	ACGCATGATACTATTCATCCTTTCA	58.475	36.000	0.00	0.00	34.09	2.69
5285	6499	6.648310	ACGCATGATACTATTCATCCTTTCAG	59.352	38.462	0.00	0.00	34.09	3.02
5286	6500	6.091849	CGCATGATACTATTCATCCTTTCAGG	59.908	42.308	0.00	0.00	34.09	3.86
5287	6501	6.128063	GCATGATACTATTCATCCTTTCAGGC	60.128	42.308	0.00	0.00	34.09	4.85
5288	6502	5.869579	TGATACTATTCATCCTTTCAGGCC	58.130	41.667	0.00	0.00	34.61	5.19
5289	6503	5.369404	TGATACTATTCATCCTTTCAGGCCA	59.631	40.000	5.01	0.00	34.61	5.36
5290	6504	4.803329	ACTATTCATCCTTTCAGGCCAT	57.197	40.909	5.01	0.00	34.61	4.40
5291	6505	4.467769	ACTATTCATCCTTTCAGGCCATG	58.532	43.478	5.01	0.00	34.61	3.66
5292	6506	3.675348	ATTCATCCTTTCAGGCCATGA	57.325	42.857	5.01	2.70	34.61	3.07
5293	6507	3.454719	TTCATCCTTTCAGGCCATGAA	57.545	42.857	5.01	9.59	46.31	2.57
5303	6517	5.549742	TTCAGGCCATGAATTTGTCTTTT	57.450	34.783	5.01	0.00	43.09	2.27
5304	6518	5.549742	TCAGGCCATGAATTTGTCTTTTT	57.450	34.783	5.01	0.00	34.02	1.94
5323	6537	2.704725	TTTTGCTCAGGTCGCATTTC	57.295	45.000	0.00	0.00	37.22	2.17
5324	6538	1.603456	TTTGCTCAGGTCGCATTTCA	58.397	45.000	0.00	0.00	37.22	2.69
5325	6539	1.603456	TTGCTCAGGTCGCATTTCAA	58.397	45.000	0.00	0.00	37.22	2.69
5326	6540	0.874390	TGCTCAGGTCGCATTTCAAC	59.126	50.000	0.00	0.00	31.40	3.18
5327	6541	0.179215	GCTCAGGTCGCATTTCAACG	60.179	55.000	0.00	0.00	0.00	4.10
5328	6542	1.148310	CTCAGGTCGCATTTCAACGT	58.852	50.000	0.00	0.00	0.00	3.99
5329	6543	2.333926	CTCAGGTCGCATTTCAACGTA	58.666	47.619	0.00	0.00	0.00	3.57
5330	6544	2.930040	CTCAGGTCGCATTTCAACGTAT	59.070	45.455	0.00	0.00	0.00	3.06
5331	6545	3.331150	TCAGGTCGCATTTCAACGTATT	58.669	40.909	0.00	0.00	0.00	1.89
5332	6546	3.749088	TCAGGTCGCATTTCAACGTATTT	59.251	39.130	0.00	0.00	0.00	1.40
5333	6547	4.088648	CAGGTCGCATTTCAACGTATTTC	58.911	43.478	0.00	0.00	0.00	2.17
5334	6548	3.749088	AGGTCGCATTTCAACGTATTTCA	59.251	39.130	0.00	0.00	0.00	2.69
5335	6549	4.394920	AGGTCGCATTTCAACGTATTTCAT	59.605	37.500	0.00	0.00	0.00	2.57
5336	6550	5.092781	GGTCGCATTTCAACGTATTTCATT	58.907	37.500	0.00	0.00	0.00	2.57
5337	6551	6.092944	AGGTCGCATTTCAACGTATTTCATTA	59.907	34.615	0.00	0.00	0.00	1.90
5338	6552	6.910433	GGTCGCATTTCAACGTATTTCATTAT	59.090	34.615	0.00	0.00	0.00	1.28
5339	6553	7.097047	GGTCGCATTTCAACGTATTTCATTATG	60.097	37.037	0.00	0.00	0.00	1.90
5340	6554	7.428183	GTCGCATTTCAACGTATTTCATTATGT	59.572	33.333	0.00	0.00	0.00	2.29
5341	6555	8.604890	TCGCATTTCAACGTATTTCATTATGTA	58.395	29.630	0.00	0.00	0.00	2.29
5342	6556	9.216087	CGCATTTCAACGTATTTCATTATGTAA	57.784	29.630	0.00	0.00	0.00	2.41
5367	6581	9.691362	AATTTTACACACATTTGAGTTACATCC	57.309	29.630	0.00	0.00	0.00	3.51
5368	6582	8.458573	TTTTACACACATTTGAGTTACATCCT	57.541	30.769	0.00	0.00	0.00	3.24
5369	6583	8.458573	TTTACACACATTTGAGTTACATCCTT	57.541	30.769	0.00	0.00	0.00	3.36
5370	6584	9.562408	TTTACACACATTTGAGTTACATCCTTA	57.438	29.630	0.00	0.00	0.00	2.69
5371	6585	7.435068	ACACACATTTGAGTTACATCCTTAC	57.565	36.000	0.00	0.00	0.00	2.34
5372	6586	6.995686	ACACACATTTGAGTTACATCCTTACA	59.004	34.615	0.00	0.00	0.00	2.41
5373	6587	7.665559	ACACACATTTGAGTTACATCCTTACAT	59.334	33.333	0.00	0.00	0.00	2.29
5374	6588	9.161629	CACACATTTGAGTTACATCCTTACATA	57.838	33.333	0.00	0.00	0.00	2.29
5375	6589	9.162764	ACACATTTGAGTTACATCCTTACATAC	57.837	33.333	0.00	0.00	0.00	2.39
5376	6590	8.328146	CACATTTGAGTTACATCCTTACATACG	58.672	37.037	0.00	0.00	0.00	3.06
5377	6591	6.897259	TTTGAGTTACATCCTTACATACGC	57.103	37.500	0.00	0.00	0.00	4.42
5378	6592	4.603985	TGAGTTACATCCTTACATACGCG	58.396	43.478	3.53	3.53	0.00	6.01
5379	6593	3.378339	AGTTACATCCTTACATACGCGC	58.622	45.455	5.73	0.00	0.00	6.86
5380	6594	3.117794	GTTACATCCTTACATACGCGCA	58.882	45.455	5.73	0.00	0.00	6.09
5381	6595	2.526304	ACATCCTTACATACGCGCAT	57.474	45.000	5.73	0.00	0.00	4.73
5382	6596	3.653539	ACATCCTTACATACGCGCATA	57.346	42.857	5.73	0.00	0.00	3.14
5383	6597	4.188247	ACATCCTTACATACGCGCATAT	57.812	40.909	5.73	0.00	0.00	1.78
5384	6598	4.566004	ACATCCTTACATACGCGCATATT	58.434	39.130	5.73	0.00	0.00	1.28
5385	6599	4.994852	ACATCCTTACATACGCGCATATTT	59.005	37.500	5.73	0.00	0.00	1.40
5386	6600	5.468746	ACATCCTTACATACGCGCATATTTT	59.531	36.000	5.73	0.00	0.00	1.82
5387	6601	5.994887	TCCTTACATACGCGCATATTTTT	57.005	34.783	5.73	0.00	0.00	1.94
5448	6662	9.401058	TGAATTTTTCAAAAATAAAAGCCTCCA	57.599	25.926	8.55	0.00	36.59	3.86
5451	6665	7.742556	TTTTCAAAAATAAAAGCCTCCATGG	57.257	32.000	4.97	4.97	39.35	3.66
5452	6666	6.678568	TTCAAAAATAAAAGCCTCCATGGA	57.321	33.333	15.27	15.27	38.35	3.41
5453	6667	6.284891	TCAAAAATAAAAGCCTCCATGGAG	57.715	37.500	31.69	31.69	41.63	3.86
5454	6668	4.743057	AAAATAAAAGCCTCCATGGAGC	57.257	40.909	32.97	26.67	40.69	4.70
5455	6669	3.677156	AATAAAAGCCTCCATGGAGCT	57.323	42.857	32.97	28.22	40.69	4.09
5456	6670	2.717639	TAAAAGCCTCCATGGAGCTC	57.282	50.000	32.97	25.25	40.69	4.09
5457	6671	0.393537	AAAAGCCTCCATGGAGCTCG	60.394	55.000	32.97	21.57	40.69	5.03
5458	6672	2.262774	AAAGCCTCCATGGAGCTCGG	62.263	60.000	32.97	22.55	40.69	4.63
5459	6673	4.925861	GCCTCCATGGAGCTCGGC	62.926	72.222	32.97	27.64	40.69	5.54
5460	6674	4.247380	CCTCCATGGAGCTCGGCC	62.247	72.222	32.97	0.00	40.69	6.13
5461	6675	3.160047	CTCCATGGAGCTCGGCCT	61.160	66.667	28.45	0.00	35.31	5.19
5462	6676	3.157252	TCCATGGAGCTCGGCCTC	61.157	66.667	11.44	0.00	0.00	4.70
5468	6682	3.579685	GAGCTCGGCCTCCAAAAC	58.420	61.111	0.00	0.00	0.00	2.43
5469	6683	2.358737	AGCTCGGCCTCCAAAACG	60.359	61.111	0.00	0.00	0.00	3.60
5470	6684	4.103103	GCTCGGCCTCCAAAACGC	62.103	66.667	0.00	0.00	0.00	4.84
5471	6685	3.431725	CTCGGCCTCCAAAACGCC	61.432	66.667	0.00	0.00	39.41	5.68
5472	6686	4.257654	TCGGCCTCCAAAACGCCA	62.258	61.111	0.00	0.00	43.17	5.69
5473	6687	3.061848	CGGCCTCCAAAACGCCAT	61.062	61.111	0.00	0.00	43.17	4.40
5474	6688	2.635443	CGGCCTCCAAAACGCCATT	61.635	57.895	0.00	0.00	43.17	3.16
5475	6689	1.215382	GGCCTCCAAAACGCCATTC	59.785	57.895	0.00	0.00	42.52	2.67
5476	6690	1.250840	GGCCTCCAAAACGCCATTCT	61.251	55.000	0.00	0.00	42.52	2.40
5477	6691	0.171231	GCCTCCAAAACGCCATTCTC	59.829	55.000	0.00	0.00	0.00	2.87
5478	6692	0.811281	CCTCCAAAACGCCATTCTCC	59.189	55.000	0.00	0.00	0.00	3.71
5479	6693	1.533625	CTCCAAAACGCCATTCTCCA	58.466	50.000	0.00	0.00	0.00	3.86
5480	6694	2.094675	CTCCAAAACGCCATTCTCCAT	58.905	47.619	0.00	0.00	0.00	3.41
5481	6695	2.091541	TCCAAAACGCCATTCTCCATC	58.908	47.619	0.00	0.00	0.00	3.51
5482	6696	2.094675	CCAAAACGCCATTCTCCATCT	58.905	47.619	0.00	0.00	0.00	2.90
5483	6697	2.098117	CCAAAACGCCATTCTCCATCTC	59.902	50.000	0.00	0.00	0.00	2.75
5484	6698	2.749076	CAAAACGCCATTCTCCATCTCA	59.251	45.455	0.00	0.00	0.00	3.27
5485	6699	2.029838	AACGCCATTCTCCATCTCAC	57.970	50.000	0.00	0.00	0.00	3.51
5486	6700	0.179100	ACGCCATTCTCCATCTCACG	60.179	55.000	0.00	0.00	0.00	4.35
5487	6701	1.493950	CGCCATTCTCCATCTCACGC	61.494	60.000	0.00	0.00	0.00	5.34
5574	9093	3.254657	GGTGTACTAGCAAACATGCCAAA	59.745	43.478	0.00	0.00	34.90	3.28
5593	9112	1.453745	CATGCCCCTACGTTGCCAT	60.454	57.895	0.00	0.00	0.00	4.40
5595	9114	2.828549	GCCCCTACGTTGCCATGG	60.829	66.667	7.63	7.63	0.00	3.66
5599	9118	1.622607	CCCTACGTTGCCATGGGAGA	61.623	60.000	15.13	0.00	40.23	3.71
5638	9157	4.485163	TCATACACACTCGACAACATCAG	58.515	43.478	0.00	0.00	0.00	2.90
5655	9174	6.335471	ACATCAGCAAATCACTTGAAATCA	57.665	33.333	0.00	0.00	37.17	2.57
5656	9175	6.154445	ACATCAGCAAATCACTTGAAATCAC	58.846	36.000	0.00	0.00	37.17	3.06
5658	9177	7.175467	ACATCAGCAAATCACTTGAAATCACTA	59.825	33.333	0.00	0.00	37.17	2.74
5677	9200	7.730067	TCACTATACGATACAAGAAACAACG	57.270	36.000	0.00	0.00	0.00	4.10
5715	9238	7.209471	TGTACACAAACATAAAGGATTGGAC	57.791	36.000	0.00	0.00	0.00	4.02

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	8.862550	ATACGTAGACTAAATAAAAACGGAGG	57.137	34.615	0.08	0.00	33.44	4.30
10	11	9.956720	GACCAAAGCTAATACGTAGACTAAATA	57.043	33.333	0.08	0.00	30.50	1.40
11	12	8.472413	TGACCAAAGCTAATACGTAGACTAAAT	58.528	33.333	0.08	0.00	30.50	1.40
12	13	7.829725	TGACCAAAGCTAATACGTAGACTAAA	58.170	34.615	0.08	0.00	30.50	1.85
13	14	7.395190	TGACCAAAGCTAATACGTAGACTAA	57.605	36.000	0.08	0.00	30.50	2.24
14	15	7.395190	TTGACCAAAGCTAATACGTAGACTA	57.605	36.000	0.08	0.00	30.50	2.59
15	16	5.909621	TGACCAAAGCTAATACGTAGACT	57.090	39.130	0.08	0.00	30.50	3.24
16	17	6.956299	TTTGACCAAAGCTAATACGTAGAC	57.044	37.500	0.08	0.00	30.50	2.59
29	30	7.062956	GTTTACAAACCTTGACTTTGACCAAAG	59.937	37.037	17.99	17.99	41.61	2.77
30	31	6.591750	TTACAAACCTTGACTTTGACCAAA	57.408	33.333	0.00	0.00	33.56	3.28
31	32	6.209788	AGTTTACAAACCTTGACTTTGACCAA	59.790	34.615	1.27	0.00	39.71	3.67
32	33	5.712917	AGTTTACAAACCTTGACTTTGACCA	59.287	36.000	1.27	0.00	39.71	4.02
33	34	6.203808	AGTTTACAAACCTTGACTTTGACC	57.796	37.500	1.27	0.00	39.71	4.02
34	35	7.810759	TCAAAGTTTACAAACCTTGACTTTGAC	59.189	33.333	20.06	3.32	46.09	3.18
41	42	6.827586	ACTGTCAAAGTTTACAAACCTTGA	57.172	33.333	12.61	12.61	43.35	3.02
115	116	8.207521	TGATGCGAAAGTACATTCAATAATGA	57.792	30.769	11.10	0.00	44.50	2.57
163	164	9.976255	CCAAGTTTATCGAAAACGATATAAACA	57.024	29.630	21.53	5.74	42.88	2.83
164	165	9.977762	ACCAAGTTTATCGAAAACGATATAAAC	57.022	29.630	16.30	16.30	41.69	2.01
166	167	9.368674	TGACCAAGTTTATCGAAAACGATATAA	57.631	29.630	11.95	7.68	35.42	0.98
167	168	8.929827	TGACCAAGTTTATCGAAAACGATATA	57.070	30.769	11.95	6.06	35.42	0.86
168	169	7.837202	TGACCAAGTTTATCGAAAACGATAT	57.163	32.000	11.95	0.00	35.42	1.63
169	170	7.655236	TTGACCAAGTTTATCGAAAACGATA	57.345	32.000	8.00	8.00	35.42	2.92
170	171	6.548441	TTGACCAAGTTTATCGAAAACGAT	57.452	33.333	9.85	9.85	35.42	3.73
171	172	5.987777	TTGACCAAGTTTATCGAAAACGA	57.012	34.783	13.69	0.00	35.42	3.85
172	173	6.196571	AGTTTGACCAAGTTTATCGAAAACG	58.803	36.000	13.69	0.00	35.42	3.60
173	174	7.980742	AAGTTTGACCAAGTTTATCGAAAAC	57.019	32.000	12.43	12.43	0.00	2.43
174	175	9.505995	GTAAAGTTTGACCAAGTTTATCGAAAA	57.494	29.630	0.00	0.00	40.73	2.29
175	176	7.851963	CGTAAAGTTTGACCAAGTTTATCGAAA	59.148	33.333	0.00	0.00	40.73	3.46
176	177	7.224362	TCGTAAAGTTTGACCAAGTTTATCGAA	59.776	33.333	14.52	0.00	40.73	3.71
177	178	6.700960	TCGTAAAGTTTGACCAAGTTTATCGA	59.299	34.615	0.00	13.71	40.73	3.59
178	179	6.879962	TCGTAAAGTTTGACCAAGTTTATCG	58.120	36.000	0.00	8.08	40.73	2.92
179	180	8.340443	ACTTCGTAAAGTTTGACCAAGTTTATC	58.660	33.333	0.00	0.00	43.28	1.75
180	181	8.217131	ACTTCGTAAAGTTTGACCAAGTTTAT	57.783	30.769	0.00	0.00	43.28	1.40
181	182	7.614124	ACTTCGTAAAGTTTGACCAAGTTTA	57.386	32.000	0.00	0.00	43.28	2.01
182	183	6.505044	ACTTCGTAAAGTTTGACCAAGTTT	57.495	33.333	0.00	0.00	43.28	2.66
208	209	9.713740	CTCTGCATATTAAATTTGACTGAAGTC	57.286	33.333	0.00	3.41	44.97	3.01
209	210	9.236006	ACTCTGCATATTAAATTTGACTGAAGT	57.764	29.630	0.00	0.00	0.00	3.01
224	225	8.621286	CCTCCGTTTTTATTTACTCTGCATATT	58.379	33.333	0.00	0.00	0.00	1.28
225	226	7.228706	CCCTCCGTTTTTATTTACTCTGCATAT	59.771	37.037	0.00	0.00	0.00	1.78
226	227	6.540914	CCCTCCGTTTTTATTTACTCTGCATA	59.459	38.462	0.00	0.00	0.00	3.14
227	228	5.357032	CCCTCCGTTTTTATTTACTCTGCAT	59.643	40.000	0.00	0.00	0.00	3.96
228	229	4.698304	CCCTCCGTTTTTATTTACTCTGCA	59.302	41.667	0.00	0.00	0.00	4.41
229	230	4.939439	TCCCTCCGTTTTTATTTACTCTGC	59.061	41.667	0.00	0.00	0.00	4.26
230	231	6.171213	ACTCCCTCCGTTTTTATTTACTCTG	58.829	40.000	0.00	0.00	0.00	3.35
231	232	6.370186	ACTCCCTCCGTTTTTATTTACTCT	57.630	37.500	0.00	0.00	0.00	3.24
232	233	9.993454	ATATACTCCCTCCGTTTTTATTTACTC	57.007	33.333	0.00	0.00	0.00	2.59
233	234	9.993454	GATATACTCCCTCCGTTTTTATTTACT	57.007	33.333	0.00	0.00	0.00	2.24
234	235	9.768662	TGATATACTCCCTCCGTTTTTATTTAC	57.231	33.333	0.00	0.00	0.00	2.01
235	236	9.768662	GTGATATACTCCCTCCGTTTTTATTTA	57.231	33.333	0.00	0.00	0.00	1.40
236	237	8.491958	AGTGATATACTCCCTCCGTTTTTATTT	58.508	33.333	0.00	0.00	33.17	1.40
237	238	8.030913	AGTGATATACTCCCTCCGTTTTTATT	57.969	34.615	0.00	0.00	33.17	1.40
238	239	7.613551	AGTGATATACTCCCTCCGTTTTTAT	57.386	36.000	0.00	0.00	33.17	1.40
239	240	7.124599	TCAAGTGATATACTCCCTCCGTTTTTA	59.875	37.037	0.00	0.00	39.18	1.52
240	241	5.952347	AGTGATATACTCCCTCCGTTTTT	57.048	39.130	0.00	0.00	33.17	1.94
241	242	5.424252	TCAAGTGATATACTCCCTCCGTTTT	59.576	40.000	0.00	0.00	39.18	2.43
242	243	4.960469	TCAAGTGATATACTCCCTCCGTTT	59.040	41.667	0.00	0.00	39.18	3.60
243	244	4.543689	TCAAGTGATATACTCCCTCCGTT	58.456	43.478	0.00	0.00	39.18	4.44
244	245	4.180377	TCAAGTGATATACTCCCTCCGT	57.820	45.455	0.00	0.00	39.18	4.69
245	246	4.767409	TGATCAAGTGATATACTCCCTCCG	59.233	45.833	0.00	0.00	39.18	4.63
246	247	6.495181	TCTTGATCAAGTGATATACTCCCTCC	59.505	42.308	29.80	0.00	39.18	4.30
247	248	7.232534	AGTCTTGATCAAGTGATATACTCCCTC	59.767	40.741	29.80	2.37	39.18	4.30
248	249	7.072562	AGTCTTGATCAAGTGATATACTCCCT	58.927	38.462	29.80	6.01	39.18	4.20
249	250	7.296628	AGTCTTGATCAAGTGATATACTCCC	57.703	40.000	29.80	8.72	39.18	4.30
250	251	7.655328	CCAAGTCTTGATCAAGTGATATACTCC	59.345	40.741	29.80	9.96	39.18	3.85
251	252	8.200792	ACCAAGTCTTGATCAAGTGATATACTC	58.799	37.037	29.80	12.90	39.18	2.59
252	253	8.083828	ACCAAGTCTTGATCAAGTGATATACT	57.916	34.615	29.80	22.36	42.89	2.12
253	254	8.607459	CAACCAAGTCTTGATCAAGTGATATAC	58.393	37.037	29.80	20.75	39.38	1.47
254	255	8.539544	TCAACCAAGTCTTGATCAAGTGATATA	58.460	33.333	29.80	11.17	39.38	0.86
255	256	7.397221	TCAACCAAGTCTTGATCAAGTGATAT	58.603	34.615	29.80	13.61	39.38	1.63
256	257	6.768483	TCAACCAAGTCTTGATCAAGTGATA	58.232	36.000	29.80	12.21	39.38	2.15
257	258	5.624159	TCAACCAAGTCTTGATCAAGTGAT	58.376	37.500	29.80	16.78	39.38	3.06
258	259	5.034852	TCAACCAAGTCTTGATCAAGTGA	57.965	39.130	29.80	21.93	39.38	3.41
259	260	5.756195	TTCAACCAAGTCTTGATCAAGTG	57.244	39.130	29.80	21.81	39.38	3.16
260	261	6.302269	AGATTCAACCAAGTCTTGATCAAGT	58.698	36.000	29.80	13.25	39.38	3.16
261	262	6.429078	TGAGATTCAACCAAGTCTTGATCAAG	59.571	38.462	26.56	26.56	39.71	3.02
262	263	6.298361	TGAGATTCAACCAAGTCTTGATCAA	58.702	36.000	14.42	8.12	0.00	2.57
263	264	5.868454	TGAGATTCAACCAAGTCTTGATCA	58.132	37.500	14.42	0.00	0.00	2.92
264	265	5.936956	ACTGAGATTCAACCAAGTCTTGATC	59.063	40.000	14.42	8.37	0.00	2.92
265	266	5.874093	ACTGAGATTCAACCAAGTCTTGAT	58.126	37.500	14.42	0.00	0.00	2.57
266	267	5.296151	ACTGAGATTCAACCAAGTCTTGA	57.704	39.130	14.42	0.00	0.00	3.02
267	268	4.151335	CGACTGAGATTCAACCAAGTCTTG	59.849	45.833	5.53	5.53	0.00	3.02
268	269	4.039245	TCGACTGAGATTCAACCAAGTCTT	59.961	41.667	0.00	0.00	0.00	3.01
269	270	3.574396	TCGACTGAGATTCAACCAAGTCT	59.426	43.478	0.00	0.00	0.00	3.24
270	271	3.675698	GTCGACTGAGATTCAACCAAGTC	59.324	47.826	8.70	0.00	0.00	3.01
271	272	3.322254	AGTCGACTGAGATTCAACCAAGT	59.678	43.478	19.30	0.00	0.00	3.16
272	273	3.919216	AGTCGACTGAGATTCAACCAAG	58.081	45.455	19.30	0.00	0.00	3.61
273	274	5.243060	TCTTAGTCGACTGAGATTCAACCAA	59.757	40.000	30.05	11.47	34.24	3.67
274	275	4.765339	TCTTAGTCGACTGAGATTCAACCA	59.235	41.667	30.05	10.74	34.24	3.67
275	276	5.096849	GTCTTAGTCGACTGAGATTCAACC	58.903	45.833	34.18	20.67	40.13	3.77
276	277	5.096849	GGTCTTAGTCGACTGAGATTCAAC	58.903	45.833	34.18	23.81	40.13	3.18
277	278	5.010933	AGGTCTTAGTCGACTGAGATTCAA	58.989	41.667	34.18	16.72	40.13	2.69
278	279	4.590918	AGGTCTTAGTCGACTGAGATTCA	58.409	43.478	34.18	15.88	40.13	2.57
279	280	6.458615	GGTTAGGTCTTAGTCGACTGAGATTC	60.459	46.154	34.18	28.19	40.13	2.52
280	281	5.357596	GGTTAGGTCTTAGTCGACTGAGATT	59.642	44.000	34.18	27.45	40.13	2.40
281	282	4.883006	GGTTAGGTCTTAGTCGACTGAGAT	59.117	45.833	34.18	24.55	40.13	2.75
282	283	4.260170	GGTTAGGTCTTAGTCGACTGAGA	58.740	47.826	30.05	30.05	36.42	3.27
283	284	4.008330	TGGTTAGGTCTTAGTCGACTGAG	58.992	47.826	26.80	26.80	34.38	3.35
284	285	3.755378	GTGGTTAGGTCTTAGTCGACTGA	59.245	47.826	28.12	19.13	34.38	3.41
285	286	3.504906	TGTGGTTAGGTCTTAGTCGACTG	59.495	47.826	28.12	12.46	34.38	3.51
286	287	3.505293	GTGTGGTTAGGTCTTAGTCGACT	59.495	47.826	23.66	23.66	34.38	4.18
287	288	3.254166	TGTGTGGTTAGGTCTTAGTCGAC	59.746	47.826	7.70	7.70	0.00	4.20
288	289	3.489355	TGTGTGGTTAGGTCTTAGTCGA	58.511	45.455	0.00	0.00	0.00	4.20
289	290	3.928727	TGTGTGGTTAGGTCTTAGTCG	57.071	47.619	0.00	0.00	0.00	4.18
290	291	7.506328	AAAAATGTGTGGTTAGGTCTTAGTC	57.494	36.000	0.00	0.00	0.00	2.59
312	313	8.830201	ATGCATTTTGTGAGCAGTAATAAAAA	57.170	26.923	0.00	0.00	42.14	1.94
313	314	8.830201	AATGCATTTTGTGAGCAGTAATAAAA	57.170	26.923	5.99	0.00	42.14	1.52
314	315	8.710551	CAAATGCATTTTGTGAGCAGTAATAAA	58.289	29.630	21.95	0.00	42.14	1.40
315	316	8.087136	TCAAATGCATTTTGTGAGCAGTAATAA	58.913	29.630	21.95	0.00	44.25	1.40
316	317	7.600960	TCAAATGCATTTTGTGAGCAGTAATA	58.399	30.769	21.95	0.00	44.25	0.98
317	318	6.457355	TCAAATGCATTTTGTGAGCAGTAAT	58.543	32.000	21.95	0.00	44.25	1.89
318	319	5.840715	TCAAATGCATTTTGTGAGCAGTAA	58.159	33.333	21.95	0.00	44.25	2.24
319	320	5.450592	TCAAATGCATTTTGTGAGCAGTA	57.549	34.783	21.95	0.00	44.25	2.74
320	321	4.304110	CTCAAATGCATTTTGTGAGCAGT	58.696	39.130	21.95	0.00	44.25	4.40
321	322	3.122948	GCTCAAATGCATTTTGTGAGCAG	59.877	43.478	36.88	20.87	44.25	4.24
322	323	3.061322	GCTCAAATGCATTTTGTGAGCA	58.939	40.909	36.88	14.82	44.25	4.26
323	324	3.323243	AGCTCAAATGCATTTTGTGAGC	58.677	40.909	35.95	35.95	44.25	4.26
324	325	4.552355	TGAGCTCAAATGCATTTTGTGAG	58.448	39.130	25.43	25.43	44.25	3.51
325	326	4.038282	ACTGAGCTCAAATGCATTTTGTGA	59.962	37.500	21.95	15.79	44.25	3.58
326	327	4.304110	ACTGAGCTCAAATGCATTTTGTG	58.696	39.130	21.95	17.05	44.25	3.33
327	328	4.595762	ACTGAGCTCAAATGCATTTTGT	57.404	36.364	21.95	4.97	44.25	2.83
328	329	5.917541	AAACTGAGCTCAAATGCATTTTG	57.082	34.783	21.95	17.47	45.08	2.44
329	330	6.764560	AGAAAAACTGAGCTCAAATGCATTTT	59.235	30.769	21.95	16.34	34.99	1.82
330	331	6.285990	AGAAAAACTGAGCTCAAATGCATTT	58.714	32.000	18.99	18.99	34.99	2.32
331	332	5.850614	AGAAAAACTGAGCTCAAATGCATT	58.149	33.333	18.85	5.99	34.99	3.56
332	333	5.464030	AGAAAAACTGAGCTCAAATGCAT	57.536	34.783	18.85	0.00	34.99	3.96
333	334	4.924305	AGAAAAACTGAGCTCAAATGCA	57.076	36.364	18.85	0.00	34.99	3.96
334	335	5.284079	TGAAGAAAAACTGAGCTCAAATGC	58.716	37.500	18.85	5.45	0.00	3.56
335	336	6.753279	TGTTGAAGAAAAACTGAGCTCAAATG	59.247	34.615	18.85	8.94	0.00	2.32
336	337	6.866480	TGTTGAAGAAAAACTGAGCTCAAAT	58.134	32.000	18.85	6.07	0.00	2.32
337	338	6.071952	ACTGTTGAAGAAAAACTGAGCTCAAA	60.072	34.615	18.85	1.77	32.59	2.69
338	339	5.415701	ACTGTTGAAGAAAAACTGAGCTCAA	59.584	36.000	18.85	1.63	32.59	3.02
339	340	4.943705	ACTGTTGAAGAAAAACTGAGCTCA	59.056	37.500	17.19	17.19	32.59	4.26
340	341	5.065218	TCACTGTTGAAGAAAAACTGAGCTC	59.935	40.000	6.82	6.82	32.59	4.09
341	342	4.943705	TCACTGTTGAAGAAAAACTGAGCT	59.056	37.500	0.00	0.00	32.59	4.09
342	343	5.163713	ACTCACTGTTGAAGAAAAACTGAGC	60.164	40.000	0.00	0.00	35.11	4.26
343	344	6.253746	CACTCACTGTTGAAGAAAAACTGAG	58.746	40.000	0.00	0.00	36.57	3.35
344	345	5.391950	GCACTCACTGTTGAAGAAAAACTGA	60.392	40.000	0.00	0.00	32.59	3.41
345	346	4.795278	GCACTCACTGTTGAAGAAAAACTG	59.205	41.667	0.00	0.00	33.94	3.16
352	353	3.541996	TCTTGCACTCACTGTTGAAGA	57.458	42.857	0.00	0.00	0.00	2.87
354	355	4.217334	TGTTTTCTTGCACTCACTGTTGAA	59.783	37.500	0.00	0.00	0.00	2.69
359	360	4.026310	GCATTTGTTTTCTTGCACTCACTG	60.026	41.667	0.00	0.00	35.22	3.66
361	362	4.114794	AGCATTTGTTTTCTTGCACTCAC	58.885	39.130	0.00	0.00	37.56	3.51
363	364	4.567959	ACAAGCATTTGTTTTCTTGCACTC	59.432	37.500	0.00	0.00	45.01	3.51
379	380	5.755042	GCCTCTAGCAATAGCAACAAGCAT	61.755	45.833	0.00	0.00	44.15	3.79
381	382	2.032675	GCCTCTAGCAATAGCAACAAGC	59.967	50.000	0.00	0.00	45.49	4.01
382	383	3.959573	GCCTCTAGCAATAGCAACAAG	57.040	47.619	0.00	0.00	45.49	3.16
426	432	3.691049	GCTGAGTGCACTTGTTTAACA	57.309	42.857	22.65	11.29	42.31	2.41
520	530	2.105128	CTTGGGAGCGGCGAGTAG	59.895	66.667	12.98	0.00	0.00	2.57
531	541	0.465705	CTTATCTGCGCTCCTTGGGA	59.534	55.000	9.73	0.00	0.00	4.37
538	548	0.747255	TCCTGGTCTTATCTGCGCTC	59.253	55.000	9.73	0.00	0.00	5.03
558	568	3.922910	AGTGGTAGTAAAACCTCGCTTC	58.077	45.455	0.00	0.00	40.44	3.86
610	623	6.304683	GCGTGTGTGGTTGTATTTTTATCTTC	59.695	38.462	0.00	0.00	0.00	2.87
623	636	4.312231	CGGCTGCGTGTGTGGTTG	62.312	66.667	0.00	0.00	0.00	3.77
627	640	4.662961	TCCTCGGCTGCGTGTGTG	62.663	66.667	0.00	0.00	0.00	3.82
632	645	3.137459	CTCTCTCCTCGGCTGCGT	61.137	66.667	0.00	0.00	0.00	5.24
634	659	1.447317	CTCTCTCTCTCCTCGGCTGC	61.447	65.000	0.00	0.00	0.00	5.25
676	701	1.021202	TGGGCTCTTTTGAACACACG	58.979	50.000	0.00	0.00	0.00	4.49
677	702	2.687935	TCTTGGGCTCTTTTGAACACAC	59.312	45.455	0.00	0.00	26.08	3.82
694	719	0.536260	CTCCCTGTCTGGCTCTCTTG	59.464	60.000	0.00	0.00	0.00	3.02
771	809	0.319297	GCTTTGCTTTGAGCTGGTGG	60.319	55.000	0.00	0.00	42.97	4.61
820	864	3.844090	GTGCGAGGAGGAGGAGGC	61.844	72.222	0.00	0.00	0.00	4.70
821	865	2.043450	AGTGCGAGGAGGAGGAGG	60.043	66.667	0.00	0.00	0.00	4.30
822	866	2.124693	GGAGTGCGAGGAGGAGGAG	61.125	68.421	0.00	0.00	0.00	3.69
823	867	2.043852	GGAGTGCGAGGAGGAGGA	60.044	66.667	0.00	0.00	0.00	3.71
824	868	2.363018	TGGAGTGCGAGGAGGAGG	60.363	66.667	0.00	0.00	0.00	4.30
825	869	1.662438	GAGTGGAGTGCGAGGAGGAG	61.662	65.000	0.00	0.00	0.00	3.69
826	870	1.679305	GAGTGGAGTGCGAGGAGGA	60.679	63.158	0.00	0.00	0.00	3.71
827	871	2.716017	GGAGTGGAGTGCGAGGAGG	61.716	68.421	0.00	0.00	0.00	4.30
828	872	2.716017	GGGAGTGGAGTGCGAGGAG	61.716	68.421	0.00	0.00	0.00	3.69
829	873	2.680352	GGGAGTGGAGTGCGAGGA	60.680	66.667	0.00	0.00	0.00	3.71
856	902	0.952659	AGTAGGAGATGGGGGATGGT	59.047	55.000	0.00	0.00	0.00	3.55
873	919	3.148279	GGAGATGGGGCGACGAGT	61.148	66.667	0.00	0.00	0.00	4.18
942	1012	4.707030	AAAAGGAAACGAACGTTCCTTT	57.293	36.364	28.29	28.29	45.71	3.11
943	1013	4.397103	AGAAAAAGGAAACGAACGTTCCTT	59.603	37.500	22.07	23.66	42.08	3.36
957	1028	2.946990	ACTCGCCGAAAAAGAAAAAGGA	59.053	40.909	0.00	0.00	0.00	3.36
958	1029	3.349488	ACTCGCCGAAAAAGAAAAAGG	57.651	42.857	0.00	0.00	0.00	3.11
959	1030	5.034797	AGAAACTCGCCGAAAAAGAAAAAG	58.965	37.500	0.00	0.00	0.00	2.27
961	1032	4.625972	AGAAACTCGCCGAAAAAGAAAA	57.374	36.364	0.00	0.00	0.00	2.29
963	1034	3.623960	TCAAGAAACTCGCCGAAAAAGAA	59.376	39.130	0.00	0.00	0.00	2.52
964	1035	3.199677	TCAAGAAACTCGCCGAAAAAGA	58.800	40.909	0.00	0.00	0.00	2.52
976	1058	0.541863	ATCCCGGCGATCAAGAAACT	59.458	50.000	9.30	0.00	0.00	2.66
1416	1498	2.363925	AGGTACTGGAGCCCCGAC	60.364	66.667	0.00	0.00	37.18	4.79
1608	1690	0.674534	CGAGGGAGGACGGAATAAGG	59.325	60.000	0.00	0.00	0.00	2.69
1719	1801	0.601576	TGTCGTACAATGCCAGCGTT	60.602	50.000	0.00	0.00	0.00	4.84
1845	1927	0.694771	TGGTGATCTTCTGCAGCCTT	59.305	50.000	9.47	0.00	0.00	4.35
2406	2488	2.040442	TTGCCGATCTCCCTGGGA	59.960	61.111	16.13	16.13	0.00	4.37
2490	2572	2.672996	AGCACCGTGATGTTGGCC	60.673	61.111	1.65	0.00	0.00	5.36
2545	2627	2.721167	CGAACTGCGGAGGGATGGA	61.721	63.158	9.36	0.00	36.03	3.41
2796	2878	1.451567	CAGGTCCAGGCTGATGCTG	60.452	63.158	17.94	0.00	39.59	4.41
2958	3040	1.722011	CGCCGGAGAAGTTGTTGTAT	58.278	50.000	5.05	0.00	0.00	2.29
2960	3042	2.251642	GCGCCGGAGAAGTTGTTGT	61.252	57.895	10.31	0.00	0.00	3.32
2985	3067	0.599204	TCTTGAAGAACGGCGTCACC	60.599	55.000	15.17	5.92	34.69	4.02
3096	3178	1.241990	CGGTCCTGACGGTCTTCAGA	61.242	60.000	9.88	0.00	45.19	3.27
3114	3196	2.456119	GGCGCAGACAAGGATCACG	61.456	63.158	10.83	0.00	31.66	4.35
3174	3256	2.486191	CCTCCTGCTTCTGTTGAACAGT	60.486	50.000	23.17	0.00	46.03	3.55
3204	3286	1.188219	ACAGGCTCGCCTTCTTCTCA	61.188	55.000	7.93	0.00	45.70	3.27
3348	3430	1.169577	CAGCTCTGTACACGACTCCT	58.830	55.000	0.00	0.00	0.00	3.69
3438	3520	2.749280	TCTGAATCTCAGCAGCGAAA	57.251	45.000	0.00	0.00	43.95	3.46
3444	3526	4.409901	TGACCCAATATCTGAATCTCAGCA	59.590	41.667	0.00	0.00	43.95	4.41
3447	3529	5.955961	TGTGACCCAATATCTGAATCTCA	57.044	39.130	0.00	0.00	0.00	3.27
3574	3656	2.125350	CAGGCTCCTGTTCTCGCC	60.125	66.667	7.75	0.00	42.79	5.54
3702	3784	2.685388	CTCATACTTGGAGTCGAGCAGA	59.315	50.000	0.00	0.00	0.00	4.26
3836	3918	5.751243	AAACACAAGTTAGTGCCTTAGTG	57.249	39.130	0.00	0.00	43.23	2.74
3837	3919	7.450903	AGATAAACACAAGTTAGTGCCTTAGT	58.549	34.615	0.00	0.00	43.23	2.24
3838	3920	7.064728	GGAGATAAACACAAGTTAGTGCCTTAG	59.935	40.741	0.00	0.00	43.23	2.18
3839	3921	6.877322	GGAGATAAACACAAGTTAGTGCCTTA	59.123	38.462	0.00	0.00	43.23	2.69
3840	3922	5.705905	GGAGATAAACACAAGTTAGTGCCTT	59.294	40.000	0.00	0.00	43.23	4.35
3841	3923	5.013183	AGGAGATAAACACAAGTTAGTGCCT	59.987	40.000	0.00	0.00	43.23	4.75
3842	3924	5.246307	AGGAGATAAACACAAGTTAGTGCC	58.754	41.667	0.00	0.00	43.23	5.01
3843	3925	6.166982	AGAGGAGATAAACACAAGTTAGTGC	58.833	40.000	0.00	0.00	43.23	4.40
3844	3926	9.877178	ATAAGAGGAGATAAACACAAGTTAGTG	57.123	33.333	0.00	0.00	44.93	2.74
3876	3958	5.063180	TCTGTCAATTGGTGAATGAATGC	57.937	39.130	5.42	0.00	38.23	3.56
3931	4013	9.371136	GAATGAATGAACACACTATCTGTCTAA	57.629	33.333	0.00	0.00	0.00	2.10
3947	4029	5.720520	TGGGATCAATTGGTGAATGAATGAA	59.279	36.000	5.42	0.00	40.50	2.57
3948	4030	5.127519	GTGGGATCAATTGGTGAATGAATGA	59.872	40.000	5.42	0.00	40.50	2.57
4001	4083	4.695928	GGTCAAAGGTTCTTGCTTAGGTAG	59.304	45.833	0.00	0.00	0.00	3.18
4016	4098	1.338020	GAAGCAACCACAGGTCAAAGG	59.662	52.381	0.00	0.00	33.12	3.11
4126	5282	8.102047	TGAGAAACTCTAGCAGTACTACTAAGT	58.898	37.037	4.40	7.82	39.91	2.24
4190	5365	2.167693	AGCATTGGAATCAACAGCATGG	59.832	45.455	0.00	0.00	43.62	3.66
4216	5392	1.980844	CGCAAATCAACACAGTGATGC	59.019	47.619	7.81	6.81	38.28	3.91
4340	5520	2.893489	ACTCTGAAATGGGAAGGCAAAC	59.107	45.455	0.00	0.00	0.00	2.93
4350	5530	3.187700	GTGTAGCCGTACTCTGAAATGG	58.812	50.000	0.00	0.00	0.00	3.16
4792	5979	2.371510	CTCCTGATCTCCCTCCATTTCC	59.628	54.545	0.00	0.00	0.00	3.13
4880	6069	5.297547	ACAACGTCATCTGAAACTGTACAT	58.702	37.500	0.00	0.00	0.00	2.29
4939	6130	3.063588	GTCGCAGGAGCAAACTAATAACC	59.936	47.826	0.00	0.00	42.27	2.85
4955	6148	2.774126	CACAGTGATGCGTCGCAG	59.226	61.111	25.78	15.54	43.65	5.18
4962	6155	1.748122	CTGGGAGGCACAGTGATGC	60.748	63.158	4.15	2.96	45.34	3.91
4996	6199	2.983229	TGCAAACAAACTGCCAAATGT	58.017	38.095	0.00	0.00	39.13	2.71
5002	6205	2.222007	TCACATGCAAACAAACTGCC	57.778	45.000	0.00	0.00	39.13	4.85
5009	6212	4.082300	GGTGGACATTATCACATGCAAACA	60.082	41.667	0.00	0.00	35.74	2.83
5058	6272	0.315251	GGTCAGCAAAGGCAGTTTCC	59.685	55.000	0.00	0.00	44.61	3.13
5059	6273	0.040067	CGGTCAGCAAAGGCAGTTTC	60.040	55.000	0.00	0.00	44.61	2.78
5060	6274	0.465460	TCGGTCAGCAAAGGCAGTTT	60.465	50.000	0.00	0.00	44.61	2.66
5061	6275	1.148273	TCGGTCAGCAAAGGCAGTT	59.852	52.632	0.00	0.00	44.61	3.16
5062	6276	1.598130	GTCGGTCAGCAAAGGCAGT	60.598	57.895	0.00	0.00	44.61	4.40
5063	6277	2.328099	GGTCGGTCAGCAAAGGCAG	61.328	63.158	0.00	0.00	44.61	4.85
5064	6278	2.281484	GGTCGGTCAGCAAAGGCA	60.281	61.111	0.00	0.00	44.61	4.75
5065	6279	2.032681	AGGTCGGTCAGCAAAGGC	59.967	61.111	0.00	0.00	41.61	4.35
5066	6280	0.951040	GTGAGGTCGGTCAGCAAAGG	60.951	60.000	0.00	0.00	0.00	3.11
5067	6281	0.034059	AGTGAGGTCGGTCAGCAAAG	59.966	55.000	0.00	0.00	0.00	2.77
5068	6282	0.249868	CAGTGAGGTCGGTCAGCAAA	60.250	55.000	0.00	0.00	0.00	3.68
5069	6283	1.367471	CAGTGAGGTCGGTCAGCAA	59.633	57.895	0.00	0.00	0.00	3.91
5070	6284	2.574018	CCAGTGAGGTCGGTCAGCA	61.574	63.158	0.00	0.00	0.00	4.41
5071	6285	2.219325	CTCCAGTGAGGTCGGTCAGC	62.219	65.000	0.00	0.00	39.02	4.26
5072	6286	1.886585	CTCCAGTGAGGTCGGTCAG	59.113	63.158	0.00	0.00	39.02	3.51
5073	6287	4.097218	CTCCAGTGAGGTCGGTCA	57.903	61.111	0.00	0.00	39.02	4.02
5081	6295	2.503895	ATTTGAAGGCCTCCAGTGAG	57.496	50.000	5.23	0.00	38.42	3.51
5082	6296	2.108075	TGAATTTGAAGGCCTCCAGTGA	59.892	45.455	5.23	0.00	0.00	3.41
5083	6297	2.517959	TGAATTTGAAGGCCTCCAGTG	58.482	47.619	5.23	0.00	0.00	3.66
5084	6298	2.978156	TGAATTTGAAGGCCTCCAGT	57.022	45.000	5.23	0.00	0.00	4.00
5085	6299	4.605640	TTTTGAATTTGAAGGCCTCCAG	57.394	40.909	5.23	0.00	0.00	3.86
5086	6300	5.071519	TGAATTTTGAATTTGAAGGCCTCCA	59.928	36.000	5.23	0.00	0.00	3.86
5087	6301	5.550290	TGAATTTTGAATTTGAAGGCCTCC	58.450	37.500	5.23	0.00	0.00	4.30
5088	6302	7.495135	TTTGAATTTTGAATTTGAAGGCCTC	57.505	32.000	5.23	0.00	0.00	4.70
5089	6303	8.467963	AATTTGAATTTTGAATTTGAAGGCCT	57.532	26.923	0.00	0.00	0.00	5.19
5090	6304	9.184062	GAAATTTGAATTTTGAATTTGAAGGCC	57.816	29.630	0.00	0.00	38.64	5.19
5091	6305	9.733219	TGAAATTTGAATTTTGAATTTGAAGGC	57.267	25.926	0.00	0.00	38.64	4.35
5160	6374	9.219603	GTGTGTTATGCCTTCATGTATATATGT	57.780	33.333	9.06	0.00	34.22	2.29
5161	6375	9.218440	TGTGTGTTATGCCTTCATGTATATATG	57.782	33.333	3.17	3.17	34.22	1.78
5162	6376	9.964354	ATGTGTGTTATGCCTTCATGTATATAT	57.036	29.630	0.00	0.00	34.22	0.86
5163	6377	9.218440	CATGTGTGTTATGCCTTCATGTATATA	57.782	33.333	0.00	0.00	34.22	0.86
5164	6378	7.720957	ACATGTGTGTTATGCCTTCATGTATAT	59.279	33.333	0.00	0.00	41.23	0.86
5165	6379	7.012232	CACATGTGTGTTATGCCTTCATGTATA	59.988	37.037	18.03	0.00	41.14	1.47
5166	6380	5.887598	ACATGTGTGTTATGCCTTCATGTAT	59.112	36.000	0.00	0.00	41.23	2.29
5167	6381	5.123661	CACATGTGTGTTATGCCTTCATGTA	59.876	40.000	18.03	0.00	41.14	2.29
5168	6382	4.081406	ACATGTGTGTTATGCCTTCATGT	58.919	39.130	0.00	0.00	39.25	3.21
5169	6383	4.417506	CACATGTGTGTTATGCCTTCATG	58.582	43.478	18.03	0.00	40.96	3.07
5170	6384	4.707030	CACATGTGTGTTATGCCTTCAT	57.293	40.909	18.03	0.00	40.96	2.57
5185	6399	4.343526	TGCCCTGAAAATTTACACACATGT	59.656	37.500	0.00	0.00	43.30	3.21
5186	6400	4.880759	TGCCCTGAAAATTTACACACATG	58.119	39.130	0.00	0.00	0.00	3.21
5187	6401	5.543507	TTGCCCTGAAAATTTACACACAT	57.456	34.783	0.00	0.00	0.00	3.21
5188	6402	5.344743	TTTGCCCTGAAAATTTACACACA	57.655	34.783	0.00	0.00	0.00	3.72
5189	6403	6.859420	ATTTTGCCCTGAAAATTTACACAC	57.141	33.333	0.00	0.00	32.70	3.82
5190	6404	6.642950	CGTATTTTGCCCTGAAAATTTACACA	59.357	34.615	0.00	0.00	36.94	3.72
5191	6405	6.643360	ACGTATTTTGCCCTGAAAATTTACAC	59.357	34.615	0.00	0.00	36.94	2.90
5192	6406	6.750148	ACGTATTTTGCCCTGAAAATTTACA	58.250	32.000	0.00	0.00	36.94	2.41
5193	6407	7.382759	TCAACGTATTTTGCCCTGAAAATTTAC	59.617	33.333	0.00	0.00	36.94	2.01
5194	6408	7.434492	TCAACGTATTTTGCCCTGAAAATTTA	58.566	30.769	0.00	0.00	36.94	1.40
5195	6409	6.284459	TCAACGTATTTTGCCCTGAAAATTT	58.716	32.000	0.00	0.00	36.94	1.82
5196	6410	5.848406	TCAACGTATTTTGCCCTGAAAATT	58.152	33.333	0.00	0.00	36.94	1.82
5197	6411	5.461032	TCAACGTATTTTGCCCTGAAAAT	57.539	34.783	0.00	0.00	38.69	1.82
5198	6412	4.920640	TCAACGTATTTTGCCCTGAAAA	57.079	36.364	0.00	0.00	0.00	2.29
5199	6413	4.920640	TTCAACGTATTTTGCCCTGAAA	57.079	36.364	0.00	0.00	0.00	2.69
5200	6414	4.920640	TTTCAACGTATTTTGCCCTGAA	57.079	36.364	0.00	0.00	0.00	3.02
5201	6415	4.520874	TCATTTCAACGTATTTTGCCCTGA	59.479	37.500	0.00	0.00	0.00	3.86
5202	6416	4.804108	TCATTTCAACGTATTTTGCCCTG	58.196	39.130	0.00	0.00	0.00	4.45
5203	6417	4.082245	CCTCATTTCAACGTATTTTGCCCT	60.082	41.667	0.00	0.00	0.00	5.19
5204	6418	4.173256	CCTCATTTCAACGTATTTTGCCC	58.827	43.478	0.00	0.00	0.00	5.36
5205	6419	4.082463	TCCCTCATTTCAACGTATTTTGCC	60.082	41.667	0.00	0.00	0.00	4.52
5206	6420	5.054390	TCCCTCATTTCAACGTATTTTGC	57.946	39.130	0.00	0.00	0.00	3.68
5207	6421	6.527722	CACATCCCTCATTTCAACGTATTTTG	59.472	38.462	0.00	0.00	0.00	2.44
5208	6422	6.620678	CACATCCCTCATTTCAACGTATTTT	58.379	36.000	0.00	0.00	0.00	1.82
5209	6423	5.393027	GCACATCCCTCATTTCAACGTATTT	60.393	40.000	0.00	0.00	0.00	1.40
5210	6424	4.096382	GCACATCCCTCATTTCAACGTATT	59.904	41.667	0.00	0.00	0.00	1.89
5211	6425	3.627577	GCACATCCCTCATTTCAACGTAT	59.372	43.478	0.00	0.00	0.00	3.06
5212	6426	3.006940	GCACATCCCTCATTTCAACGTA	58.993	45.455	0.00	0.00	0.00	3.57
5213	6427	1.812571	GCACATCCCTCATTTCAACGT	59.187	47.619	0.00	0.00	0.00	3.99
5214	6428	1.811965	TGCACATCCCTCATTTCAACG	59.188	47.619	0.00	0.00	0.00	4.10
5215	6429	3.940209	TTGCACATCCCTCATTTCAAC	57.060	42.857	0.00	0.00	0.00	3.18
5216	6430	4.952071	TTTTGCACATCCCTCATTTCAA	57.048	36.364	0.00	0.00	0.00	2.69
5217	6431	4.952071	TTTTTGCACATCCCTCATTTCA	57.048	36.364	0.00	0.00	0.00	2.69
5235	6449	9.083080	GTTAAATAGCGCCATATTTGTCTTTTT	57.917	29.630	19.42	3.27	36.33	1.94
5236	6450	7.431084	CGTTAAATAGCGCCATATTTGTCTTTT	59.569	33.333	19.42	0.00	36.33	2.27
5237	6451	6.910433	CGTTAAATAGCGCCATATTTGTCTTT	59.090	34.615	19.42	2.39	36.33	2.52
5238	6452	6.427150	CGTTAAATAGCGCCATATTTGTCTT	58.573	36.000	19.42	0.00	36.33	3.01
5239	6453	5.985781	CGTTAAATAGCGCCATATTTGTCT	58.014	37.500	19.42	2.10	36.33	3.41
5251	6465	7.949186	TGAATAGTATCATGCGTTAAATAGCG	58.051	34.615	0.00	0.00	35.87	4.26
5252	6466	9.907576	GATGAATAGTATCATGCGTTAAATAGC	57.092	33.333	0.00	0.00	40.08	2.97
5279	6493	4.796038	AGACAAATTCATGGCCTGAAAG	57.204	40.909	17.79	13.80	46.62	2.62
5280	6494	5.549742	AAAGACAAATTCATGGCCTGAAA	57.450	34.783	17.79	4.56	46.62	2.69
5282	6496	5.549742	AAAAAGACAAATTCATGGCCTGA	57.450	34.783	3.32	2.06	0.00	3.86
5308	6522	0.179215	CGTTGAAATGCGACCTGAGC	60.179	55.000	0.00	0.00	0.00	4.26
5309	6523	1.148310	ACGTTGAAATGCGACCTGAG	58.852	50.000	0.00	0.00	0.00	3.35
5310	6524	2.442212	TACGTTGAAATGCGACCTGA	57.558	45.000	0.00	0.00	0.00	3.86
5311	6525	3.740044	AATACGTTGAAATGCGACCTG	57.260	42.857	0.00	0.00	0.00	4.00
5312	6526	3.749088	TGAAATACGTTGAAATGCGACCT	59.251	39.130	0.00	0.00	0.00	3.85
5313	6527	4.073169	TGAAATACGTTGAAATGCGACC	57.927	40.909	0.00	0.00	0.00	4.79
5314	6528	7.428183	ACATAATGAAATACGTTGAAATGCGAC	59.572	33.333	0.00	0.00	0.00	5.19
5315	6529	7.468441	ACATAATGAAATACGTTGAAATGCGA	58.532	30.769	0.00	0.00	0.00	5.10
5316	6530	7.663630	ACATAATGAAATACGTTGAAATGCG	57.336	32.000	0.00	0.00	0.00	4.73
5341	6555	9.691362	GGATGTAACTCAAATGTGTGTAAAATT	57.309	29.630	0.00	0.00	31.33	1.82
5342	6556	9.077885	AGGATGTAACTCAAATGTGTGTAAAAT	57.922	29.630	0.00	0.00	31.33	1.82
5343	6557	8.458573	AGGATGTAACTCAAATGTGTGTAAAA	57.541	30.769	0.00	0.00	31.33	1.52
5344	6558	8.458573	AAGGATGTAACTCAAATGTGTGTAAA	57.541	30.769	0.00	0.00	31.33	2.01
5345	6559	8.995220	GTAAGGATGTAACTCAAATGTGTGTAA	58.005	33.333	0.00	0.00	31.33	2.41
5346	6560	8.151596	TGTAAGGATGTAACTCAAATGTGTGTA	58.848	33.333	0.00	0.00	31.33	2.90
5347	6561	6.995686	TGTAAGGATGTAACTCAAATGTGTGT	59.004	34.615	0.00	0.00	32.90	3.72
5348	6562	7.433708	TGTAAGGATGTAACTCAAATGTGTG	57.566	36.000	0.00	0.00	0.00	3.82
5349	6563	9.162764	GTATGTAAGGATGTAACTCAAATGTGT	57.837	33.333	0.00	0.00	0.00	3.72
5350	6564	8.328146	CGTATGTAAGGATGTAACTCAAATGTG	58.672	37.037	0.00	0.00	0.00	3.21
5351	6565	7.011109	GCGTATGTAAGGATGTAACTCAAATGT	59.989	37.037	0.00	0.00	0.00	2.71
5352	6566	7.345192	GCGTATGTAAGGATGTAACTCAAATG	58.655	38.462	0.00	0.00	0.00	2.32
5353	6567	6.200286	CGCGTATGTAAGGATGTAACTCAAAT	59.800	38.462	0.00	0.00	0.00	2.32
5354	6568	5.517411	CGCGTATGTAAGGATGTAACTCAAA	59.483	40.000	0.00	0.00	0.00	2.69
5355	6569	5.038683	CGCGTATGTAAGGATGTAACTCAA	58.961	41.667	0.00	0.00	0.00	3.02
5356	6570	4.603985	CGCGTATGTAAGGATGTAACTCA	58.396	43.478	0.00	0.00	0.00	3.41
5357	6571	3.424529	GCGCGTATGTAAGGATGTAACTC	59.575	47.826	8.43	0.00	0.00	3.01
5358	6572	3.181484	TGCGCGTATGTAAGGATGTAACT	60.181	43.478	8.43	0.00	0.00	2.24
5359	6573	3.117794	TGCGCGTATGTAAGGATGTAAC	58.882	45.455	8.43	0.00	0.00	2.50
5360	6574	3.439895	TGCGCGTATGTAAGGATGTAA	57.560	42.857	8.43	0.00	0.00	2.41
5361	6575	3.653539	ATGCGCGTATGTAAGGATGTA	57.346	42.857	9.48	0.00	0.00	2.29
5362	6576	2.526304	ATGCGCGTATGTAAGGATGT	57.474	45.000	9.48	0.00	0.00	3.06
5363	6577	5.530519	AAATATGCGCGTATGTAAGGATG	57.469	39.130	22.30	0.00	0.00	3.51
5364	6578	6.554334	AAAAATATGCGCGTATGTAAGGAT	57.446	33.333	22.30	2.44	0.00	3.24
5365	6579	5.994887	AAAAATATGCGCGTATGTAAGGA	57.005	34.783	22.30	0.00	0.00	3.36
5422	6636	9.401058	TGGAGGCTTTTATTTTTGAAAAATTCA	57.599	25.926	19.57	6.12	38.04	2.57
5425	6639	8.795513	CCATGGAGGCTTTTATTTTTGAAAAAT	58.204	29.630	18.56	18.56	0.00	1.82
5426	6640	7.995488	TCCATGGAGGCTTTTATTTTTGAAAAA	59.005	29.630	11.44	5.47	37.29	1.94
5427	6641	7.512992	TCCATGGAGGCTTTTATTTTTGAAAA	58.487	30.769	11.44	0.00	37.29	2.29
5428	6642	7.072263	TCCATGGAGGCTTTTATTTTTGAAA	57.928	32.000	11.44	0.00	37.29	2.69
5429	6643	6.678568	TCCATGGAGGCTTTTATTTTTGAA	57.321	33.333	11.44	0.00	37.29	2.69
5430	6644	5.337491	GCTCCATGGAGGCTTTTATTTTTGA	60.337	40.000	36.92	0.77	42.19	2.69
5431	6645	4.872124	GCTCCATGGAGGCTTTTATTTTTG	59.128	41.667	36.92	12.89	42.19	2.44
5432	6646	4.779489	AGCTCCATGGAGGCTTTTATTTTT	59.221	37.500	36.92	11.92	42.19	1.94
5433	6647	4.356436	AGCTCCATGGAGGCTTTTATTTT	58.644	39.130	36.92	12.52	42.19	1.82
5434	6648	3.956848	GAGCTCCATGGAGGCTTTTATTT	59.043	43.478	36.92	15.25	42.19	1.40
5435	6649	3.560105	GAGCTCCATGGAGGCTTTTATT	58.440	45.455	36.92	15.86	42.19	1.40
5436	6650	2.486191	CGAGCTCCATGGAGGCTTTTAT	60.486	50.000	36.92	16.48	42.19	1.40
5437	6651	1.134401	CGAGCTCCATGGAGGCTTTTA	60.134	52.381	36.92	4.58	42.19	1.52
5438	6652	0.393537	CGAGCTCCATGGAGGCTTTT	60.394	55.000	36.92	17.10	42.19	2.27
5439	6653	1.222936	CGAGCTCCATGGAGGCTTT	59.777	57.895	36.92	17.72	42.19	3.51
5440	6654	2.739996	CCGAGCTCCATGGAGGCTT	61.740	63.158	36.92	20.29	42.19	4.35
5441	6655	3.160047	CCGAGCTCCATGGAGGCT	61.160	66.667	36.92	32.13	42.19	4.58
5442	6656	4.925861	GCCGAGCTCCATGGAGGC	62.926	72.222	36.92	29.82	42.19	4.70
5443	6657	4.247380	GGCCGAGCTCCATGGAGG	62.247	72.222	36.92	25.05	42.19	4.30
5444	6658	3.160047	AGGCCGAGCTCCATGGAG	61.160	66.667	33.73	33.73	44.56	3.86
5445	6659	3.157252	GAGGCCGAGCTCCATGGA	61.157	66.667	15.27	15.27	0.00	3.41
5446	6660	4.247380	GGAGGCCGAGCTCCATGG	62.247	72.222	4.97	4.97	39.45	3.66
5447	6661	3.473647	TGGAGGCCGAGCTCCATG	61.474	66.667	8.47	0.00	44.02	3.66
5449	6663	2.525124	TTTTGGAGGCCGAGCTCCA	61.525	57.895	8.47	7.35	46.84	3.86
5450	6664	2.041115	GTTTTGGAGGCCGAGCTCC	61.041	63.158	8.47	0.00	40.05	4.70
5451	6665	2.391389	CGTTTTGGAGGCCGAGCTC	61.391	63.158	2.73	2.73	0.00	4.09
5452	6666	2.358737	CGTTTTGGAGGCCGAGCT	60.359	61.111	0.00	0.00	0.00	4.09
5453	6667	4.103103	GCGTTTTGGAGGCCGAGC	62.103	66.667	0.00	0.00	33.08	5.03
5458	6672	0.171231	GAGAATGGCGTTTTGGAGGC	59.829	55.000	0.00	0.00	38.40	4.70
5459	6673	0.811281	GGAGAATGGCGTTTTGGAGG	59.189	55.000	0.00	0.00	0.00	4.30
5460	6674	1.533625	TGGAGAATGGCGTTTTGGAG	58.466	50.000	0.00	0.00	0.00	3.86
5461	6675	2.091541	GATGGAGAATGGCGTTTTGGA	58.908	47.619	0.00	0.00	0.00	3.53
5462	6676	2.094675	AGATGGAGAATGGCGTTTTGG	58.905	47.619	0.00	0.00	0.00	3.28
5463	6677	2.749076	TGAGATGGAGAATGGCGTTTTG	59.251	45.455	0.00	0.00	0.00	2.44
5464	6678	2.749621	GTGAGATGGAGAATGGCGTTTT	59.250	45.455	0.00	0.00	0.00	2.43
5465	6679	2.359900	GTGAGATGGAGAATGGCGTTT	58.640	47.619	0.00	0.00	0.00	3.60
5466	6680	1.740380	CGTGAGATGGAGAATGGCGTT	60.740	52.381	0.00	0.00	0.00	4.84
5467	6681	0.179100	CGTGAGATGGAGAATGGCGT	60.179	55.000	0.00	0.00	0.00	5.68
5468	6682	1.493950	GCGTGAGATGGAGAATGGCG	61.494	60.000	0.00	0.00	0.00	5.69
5469	6683	1.162800	GGCGTGAGATGGAGAATGGC	61.163	60.000	0.00	0.00	0.00	4.40
5470	6684	0.533755	GGGCGTGAGATGGAGAATGG	60.534	60.000	0.00	0.00	0.00	3.16
5471	6685	0.178767	TGGGCGTGAGATGGAGAATG	59.821	55.000	0.00	0.00	0.00	2.67
5472	6686	1.135094	ATGGGCGTGAGATGGAGAAT	58.865	50.000	0.00	0.00	0.00	2.40
5473	6687	1.788229	TATGGGCGTGAGATGGAGAA	58.212	50.000	0.00	0.00	0.00	2.87
5474	6688	2.015456	ATATGGGCGTGAGATGGAGA	57.985	50.000	0.00	0.00	0.00	3.71
5475	6689	2.828520	AGTATATGGGCGTGAGATGGAG	59.171	50.000	0.00	0.00	0.00	3.86
5476	6690	2.889512	AGTATATGGGCGTGAGATGGA	58.110	47.619	0.00	0.00	0.00	3.41
5477	6691	3.764434	ACTAGTATATGGGCGTGAGATGG	59.236	47.826	0.00	0.00	0.00	3.51
5478	6692	5.414765	TGTACTAGTATATGGGCGTGAGATG	59.585	44.000	5.75	0.00	0.00	2.90
5479	6693	5.415077	GTGTACTAGTATATGGGCGTGAGAT	59.585	44.000	5.75	0.00	0.00	2.75
5480	6694	4.758674	GTGTACTAGTATATGGGCGTGAGA	59.241	45.833	5.75	0.00	0.00	3.27
5481	6695	4.760715	AGTGTACTAGTATATGGGCGTGAG	59.239	45.833	5.75	0.00	0.00	3.51
5482	6696	4.722220	AGTGTACTAGTATATGGGCGTGA	58.278	43.478	5.75	0.00	0.00	4.35
5483	6697	6.376978	GTTAGTGTACTAGTATATGGGCGTG	58.623	44.000	5.75	0.00	0.00	5.34
5484	6698	5.180117	CGTTAGTGTACTAGTATATGGGCGT	59.820	44.000	5.75	0.00	0.00	5.68
5485	6699	5.625251	CGTTAGTGTACTAGTATATGGGCG	58.375	45.833	5.75	4.47	0.00	6.13
5486	6700	5.397326	GCGTTAGTGTACTAGTATATGGGC	58.603	45.833	5.75	1.33	0.00	5.36
5487	6701	5.105997	GGGCGTTAGTGTACTAGTATATGGG	60.106	48.000	5.75	0.00	0.00	4.00
5574	9093	2.045340	GGCAACGTAGGGGCATGT	60.045	61.111	0.00	0.00	32.36	3.21
5584	9103	1.698506	TTTTTCTCCCATGGCAACGT	58.301	45.000	6.09	0.00	42.51	3.99
5638	9157	7.684670	TCGTATAGTGATTTCAAGTGATTTGC	58.315	34.615	0.00	0.00	36.70	3.68
5655	9174	7.307694	TCACGTTGTTTCTTGTATCGTATAGT	58.692	34.615	0.00	0.00	0.00	2.12
5656	9175	7.730067	TCACGTTGTTTCTTGTATCGTATAG	57.270	36.000	0.00	0.00	0.00	1.31
5658	9177	8.692110	TTATCACGTTGTTTCTTGTATCGTAT	57.308	30.769	0.00	0.00	0.00	3.06
5676	9199	4.640805	GTGTACAACACCACTTATCACG	57.359	45.455	0.00	0.00	43.05	4.35

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.