Multiple sequence alignment - TraesCS7D01G354100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G354100 chr7D 100.000 4164 0 0 1 4164 458009924 458014087 0.000000e+00 7690.0
1 TraesCS7D01G354100 chr7D 90.244 82 8 0 3455 3536 552272146 552272065 1.580000e-19 108.0
2 TraesCS7D01G354100 chr7D 90.000 80 5 3 3461 3539 3754112 3754189 2.650000e-17 100.0
3 TraesCS7D01G354100 chr7D 89.583 48 3 1 2402 2449 614498647 614498602 4.500000e-05 60.2
4 TraesCS7D01G354100 chr7D 100.000 28 0 0 138 165 627442674 627442701 8.000000e-03 52.8
5 TraesCS7D01G354100 chrUn 88.951 1430 93 30 1990 3384 92185550 92184151 0.000000e+00 1705.0
6 TraesCS7D01G354100 chrUn 88.462 234 19 7 3812 4044 92184019 92183793 4.100000e-70 276.0
7 TraesCS7D01G354100 chrUn 94.000 50 2 1 3598 3647 59178855 59178807 1.610000e-09 75.0
8 TraesCS7D01G354100 chr7B 88.861 1212 70 25 661 1862 479780778 479781934 0.000000e+00 1430.0
9 TraesCS7D01G354100 chr7B 86.775 862 79 20 2539 3384 479782516 479783358 0.000000e+00 928.0
10 TraesCS7D01G354100 chr7B 94.059 202 10 2 1 200 479780290 479780491 5.230000e-79 305.0
11 TraesCS7D01G354100 chr7B 84.437 302 23 14 3741 4032 479783910 479784197 4.100000e-70 276.0
12 TraesCS7D01G354100 chr7B 77.155 232 33 13 102 319 94747954 94748179 2.630000e-22 117.0
13 TraesCS7D01G354100 chr7B 91.358 81 7 0 3456 3536 208662013 208661933 1.220000e-20 111.0
14 TraesCS7D01G354100 chr7B 88.000 50 4 2 2402 2451 58643163 58643116 1.620000e-04 58.4
15 TraesCS7D01G354100 chr7A 85.348 935 68 26 757 1652 542710962 542710058 0.000000e+00 904.0
16 TraesCS7D01G354100 chr7A 85.075 871 92 23 2539 3390 542709162 542708311 0.000000e+00 854.0
17 TraesCS7D01G354100 chr7A 91.367 278 23 1 393 670 198921002 198920726 3.040000e-101 379.0
18 TraesCS7D01G354100 chr7A 80.678 295 35 12 3889 4164 542707255 542706964 4.220000e-50 209.0
19 TraesCS7D01G354100 chr7A 100.000 36 0 0 2405 2440 668255450 668255485 2.690000e-07 67.6
20 TraesCS7D01G354100 chr2B 93.916 263 16 0 401 663 616964476 616964214 8.390000e-107 398.0
21 TraesCS7D01G354100 chr3B 93.156 263 18 0 401 663 758909685 758909423 1.820000e-103 387.0
22 TraesCS7D01G354100 chr3B 94.915 59 3 0 3597 3655 263785064 263785122 4.430000e-15 93.5
23 TraesCS7D01G354100 chr5B 92.537 268 20 0 398 665 562547497 562547230 6.530000e-103 385.0
24 TraesCS7D01G354100 chr5B 91.463 82 7 0 3455 3536 403781326 403781407 3.400000e-21 113.0
25 TraesCS7D01G354100 chr5B 84.946 93 10 2 3561 3653 300862085 300862173 1.590000e-14 91.6
26 TraesCS7D01G354100 chr5B 90.385 52 5 0 2401 2452 211061756 211061705 7.470000e-08 69.4
27 TraesCS7D01G354100 chr5A 92.830 265 19 0 399 663 463746732 463746468 6.530000e-103 385.0
28 TraesCS7D01G354100 chr5A 95.652 46 2 0 2405 2450 691833798 691833753 1.610000e-09 75.0
29 TraesCS7D01G354100 chr4A 92.830 265 19 0 400 664 666841738 666841474 6.530000e-103 385.0
30 TraesCS7D01G354100 chr4A 92.830 265 19 0 400 664 666845231 666844967 6.530000e-103 385.0
31 TraesCS7D01G354100 chr4A 88.235 85 9 1 3455 3539 585692761 585692844 2.650000e-17 100.0
32 TraesCS7D01G354100 chr5D 92.803 264 19 0 401 664 50591189 50591452 2.350000e-102 383.0
33 TraesCS7D01G354100 chr5D 90.244 82 6 1 3455 3536 347364881 347364802 5.690000e-19 106.0
34 TraesCS7D01G354100 chr5D 98.077 52 1 0 2402 2453 444302158 444302209 1.590000e-14 91.6
35 TraesCS7D01G354100 chr5D 78.814 118 23 2 3538 3654 444741870 444741986 1.240000e-10 78.7
36 TraesCS7D01G354100 chr6D 92.776 263 19 0 401 663 434447425 434447163 8.450000e-102 381.0
37 TraesCS7D01G354100 chr4B 91.111 90 7 1 3455 3543 22846476 22846387 2.030000e-23 121.0
38 TraesCS7D01G354100 chr2D 94.118 68 4 0 3464 3531 35210484 35210417 2.050000e-18 104.0
39 TraesCS7D01G354100 chr2A 88.235 85 9 1 3455 3539 195823871 195823954 2.650000e-17 100.0
40 TraesCS7D01G354100 chr1D 85.106 94 10 2 3561 3654 187166882 187166793 4.430000e-15 93.5
41 TraesCS7D01G354100 chr1D 84.783 92 10 2 3561 3652 187182119 187182032 5.730000e-14 89.8
42 TraesCS7D01G354100 chr1D 95.122 41 2 0 2409 2449 355180540 355180580 9.660000e-07 65.8
43 TraesCS7D01G354100 chr1D 78.761 113 8 10 122 223 349092634 349092741 1.250000e-05 62.1
44 TraesCS7D01G354100 chr6B 92.188 64 4 1 3591 3654 312278088 312278026 5.730000e-14 89.8
45 TraesCS7D01G354100 chr1B 92.188 64 4 1 3591 3654 253369829 253369767 5.730000e-14 89.8
46 TraesCS7D01G354100 chr6A 97.674 43 1 0 2407 2449 409429967 409430009 1.610000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G354100 chr7D 458009924 458014087 4163 False 7690.000000 7690 100.000000 1 4164 1 chr7D.!!$F2 4163
1 TraesCS7D01G354100 chrUn 92183793 92185550 1757 True 990.500000 1705 88.706500 1990 4044 2 chrUn.!!$R2 2054
2 TraesCS7D01G354100 chr7B 479780290 479784197 3907 False 734.750000 1430 88.533000 1 4032 4 chr7B.!!$F2 4031
3 TraesCS7D01G354100 chr7A 542706964 542710962 3998 True 655.666667 904 83.700333 757 4164 3 chr7A.!!$R2 3407
4 TraesCS7D01G354100 chr4A 666841474 666845231 3757 True 385.000000 385 92.830000 400 664 2 chr4A.!!$R1 264

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
414 504 0.248289 AAATGTACACCCTCCGTCCG 59.752 55.000 0.00 0.0 0.00 4.79 F
765 855 0.680618 TAACCACGAACGACATGGGT 59.319 50.000 0.00 0.0 37.86 4.51 F
1412 1890 0.179161 CTCGGCGTCTCTGTACCTTG 60.179 60.000 6.85 0.0 0.00 3.61 F
1831 2641 1.067635 CACTGTTGGGTGCTTAATGCC 60.068 52.381 0.00 0.0 42.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1393 1871 0.179161 CAAGGTACAGAGACGCCGAG 60.179 60.0 0.00 0.00 0.00 4.63 R
2739 3600 1.436195 GCAAGTGCTTGGTGACGTCA 61.436 55.0 15.76 15.76 40.74 4.35 R
2859 3724 0.400213 CAGCTTGGTGGGTAACTGGA 59.600 55.0 0.00 0.00 0.00 3.86 R
3633 6022 0.039764 GGGCCAGTTCTTTTAGGGCT 59.960 55.0 4.39 0.00 45.21 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 6.721571 AACGTGTATGAGAAATAGTGGTTG 57.278 37.500 0.00 0.00 0.00 3.77
118 121 9.328721 GTTGAGCAATTTTTAATGGCAATAAAC 57.671 29.630 7.23 0.00 0.00 2.01
120 123 9.228949 TGAGCAATTTTTAATGGCAATAAACAT 57.771 25.926 7.23 4.29 0.00 2.71
262 348 5.412904 TGTTGTACATTTTCCGTATGCATCA 59.587 36.000 0.19 0.00 0.00 3.07
414 504 0.248289 AAATGTACACCCTCCGTCCG 59.752 55.000 0.00 0.00 0.00 4.79
439 529 7.411588 CGCGAATAAGTGTACTTCTAGCTTTTT 60.412 37.037 0.00 0.00 37.40 1.94
646 736 9.659830 AGACAAAAGTTAAAAGTACGCTTATTG 57.340 29.630 0.00 0.00 33.95 1.90
678 768 3.251004 GGGAGTAGAAACAAGCAACACAG 59.749 47.826 0.00 0.00 0.00 3.66
765 855 0.680618 TAACCACGAACGACATGGGT 59.319 50.000 0.00 0.00 37.86 4.51
790 880 2.159379 TCAGAATGTCGACATGGACGAG 60.159 50.000 30.57 19.90 40.37 4.18
793 883 2.846039 ATGTCGACATGGACGAGTAC 57.154 50.000 29.49 7.44 40.37 2.73
908 1016 2.626780 GCCTTCCCAAACAGCCGAC 61.627 63.158 0.00 0.00 0.00 4.79
946 1054 2.270205 CATCAAGCGTCCCAGCCT 59.730 61.111 0.00 0.00 38.01 4.58
956 1064 1.915266 TCCCAGCCTGTCACTGAGG 60.915 63.158 0.00 0.00 37.32 3.86
1144 1252 1.523758 CACCAACTTCTACACCAGGC 58.476 55.000 0.00 0.00 0.00 4.85
1185 1293 0.915364 GCCTCCTCTGATCTGGGTTT 59.085 55.000 0.00 0.00 0.00 3.27
1187 1295 2.191400 CCTCCTCTGATCTGGGTTTCA 58.809 52.381 0.00 0.00 0.00 2.69
1190 1298 4.450053 CTCCTCTGATCTGGGTTTCATTC 58.550 47.826 0.00 0.00 0.00 2.67
1241 1349 2.189521 GGCCGTGGTTGGATCGAT 59.810 61.111 0.00 0.00 0.00 3.59
1268 1376 1.202545 GGGTTTATGAGGACGAGGAGC 60.203 57.143 0.00 0.00 0.00 4.70
1299 1407 1.896465 GGAGATATTCTCGGGGTCCAG 59.104 57.143 0.00 0.00 44.28 3.86
1389 1867 3.012959 TCCCAGAGGAGAGGTAACTTGAT 59.987 47.826 0.00 0.00 43.35 2.57
1390 1868 3.777522 CCCAGAGGAGAGGTAACTTGATT 59.222 47.826 0.00 0.00 42.35 2.57
1391 1869 4.383552 CCCAGAGGAGAGGTAACTTGATTG 60.384 50.000 0.00 0.00 42.35 2.67
1393 1871 8.526065 CCCAGAGGAGAGGTAACTTGATTGAC 62.526 50.000 0.00 0.00 42.35 3.18
1399 1877 1.659098 GGTAACTTGATTGACTCGGCG 59.341 52.381 0.00 0.00 0.00 6.46
1400 1878 2.334838 GTAACTTGATTGACTCGGCGT 58.665 47.619 6.85 0.00 0.00 5.68
1401 1879 1.429463 AACTTGATTGACTCGGCGTC 58.571 50.000 6.85 0.00 43.14 5.19
1402 1880 0.603569 ACTTGATTGACTCGGCGTCT 59.396 50.000 6.85 0.00 43.25 4.18
1403 1881 1.272781 CTTGATTGACTCGGCGTCTC 58.727 55.000 6.85 3.03 43.25 3.36
1404 1882 0.888619 TTGATTGACTCGGCGTCTCT 59.111 50.000 6.85 0.00 43.25 3.10
1408 1886 0.520404 TTGACTCGGCGTCTCTGTAC 59.480 55.000 6.85 0.00 43.25 2.90
1409 1887 1.303799 TGACTCGGCGTCTCTGTACC 61.304 60.000 6.85 0.00 43.25 3.34
1410 1888 1.002379 ACTCGGCGTCTCTGTACCT 60.002 57.895 6.85 0.00 0.00 3.08
1411 1889 0.608582 ACTCGGCGTCTCTGTACCTT 60.609 55.000 6.85 0.00 0.00 3.50
1412 1890 0.179161 CTCGGCGTCTCTGTACCTTG 60.179 60.000 6.85 0.00 0.00 3.61
1419 1897 4.184629 GCGTCTCTGTACCTTGATTGAAT 58.815 43.478 0.00 0.00 0.00 2.57
1459 2053 2.233676 GGTTCCTTGTAGCCCCAAAATG 59.766 50.000 0.00 0.00 0.00 2.32
1463 2057 2.524306 CTTGTAGCCCCAAAATGTCCA 58.476 47.619 0.00 0.00 0.00 4.02
1494 2093 2.010043 GCCCAATTGCCATTGAAGCTG 61.010 52.381 11.92 0.00 42.35 4.24
1574 2188 1.069500 CGGGTGTGGAAATGAAACGAC 60.069 52.381 0.00 0.00 0.00 4.34
1610 2274 9.788960 AAAACTGAAATTGACTTAGAAGTTCAC 57.211 29.630 5.50 0.00 39.88 3.18
1647 2375 6.277918 CTTTTAGGAAAAGCAAGCAGTTTG 57.722 37.500 0.00 0.00 41.13 2.93
1648 2376 5.337578 TTTAGGAAAAGCAAGCAGTTTGT 57.662 34.783 0.00 0.00 39.08 2.83
1650 2378 4.574599 AGGAAAAGCAAGCAGTTTGTAG 57.425 40.909 0.00 0.00 39.08 2.74
1651 2379 4.207165 AGGAAAAGCAAGCAGTTTGTAGA 58.793 39.130 0.00 0.00 39.08 2.59
1652 2380 4.829492 AGGAAAAGCAAGCAGTTTGTAGAT 59.171 37.500 0.00 0.00 39.08 1.98
1653 2381 4.919754 GGAAAAGCAAGCAGTTTGTAGATG 59.080 41.667 0.00 0.00 39.08 2.90
1657 2386 5.113502 AGCAAGCAGTTTGTAGATGTTTC 57.886 39.130 0.00 0.00 39.08 2.78
1684 2413 5.009010 AGCAGTTTGTAGAATTGTGGAACTG 59.991 40.000 16.36 16.36 43.09 3.16
1696 2426 2.173782 TGTGGAACTGGCTCCTGTTTAA 59.826 45.455 11.61 2.54 38.03 1.52
1707 2508 6.919721 TGGCTCCTGTTTAATTACATTTCAC 58.080 36.000 0.00 0.00 0.00 3.18
1708 2509 6.491745 TGGCTCCTGTTTAATTACATTTCACA 59.508 34.615 0.00 0.00 0.00 3.58
1732 2533 5.569355 TCATCCTTCTGCAGAACCATTAAA 58.431 37.500 25.16 2.47 0.00 1.52
1737 2538 6.016276 TCCTTCTGCAGAACCATTAAACTTTC 60.016 38.462 25.16 0.00 0.00 2.62
1765 2575 7.219322 TGATAGCAACAGCATACTATCATTGT 58.781 34.615 7.32 0.00 43.62 2.71
1766 2576 5.998454 AGCAACAGCATACTATCATTGTC 57.002 39.130 0.00 0.00 0.00 3.18
1768 2578 5.757320 AGCAACAGCATACTATCATTGTCTC 59.243 40.000 0.00 0.00 0.00 3.36
1770 2580 6.925718 GCAACAGCATACTATCATTGTCTCTA 59.074 38.462 0.00 0.00 0.00 2.43
1772 2582 9.486497 CAACAGCATACTATCATTGTCTCTATT 57.514 33.333 0.00 0.00 0.00 1.73
1773 2583 9.486497 AACAGCATACTATCATTGTCTCTATTG 57.514 33.333 0.00 0.00 0.00 1.90
1775 2585 8.309656 CAGCATACTATCATTGTCTCTATTGGA 58.690 37.037 0.00 0.00 0.00 3.53
1777 2587 9.664332 GCATACTATCATTGTCTCTATTGGATT 57.336 33.333 0.00 0.00 0.00 3.01
1819 2629 1.470098 GTTATCAGGCAGCACTGTTGG 59.530 52.381 9.83 0.00 39.48 3.77
1831 2641 1.067635 CACTGTTGGGTGCTTAATGCC 60.068 52.381 0.00 0.00 42.00 4.40
1832 2642 1.203050 ACTGTTGGGTGCTTAATGCCT 60.203 47.619 0.00 0.00 42.00 4.75
1834 2644 1.202989 TGTTGGGTGCTTAATGCCTGA 60.203 47.619 0.00 0.00 42.00 3.86
1841 2651 3.369471 GGTGCTTAATGCCTGAGACTACA 60.369 47.826 0.00 0.00 42.00 2.74
1856 2666 9.072375 CCTGAGACTACATAGAGATGATTTACA 57.928 37.037 0.00 0.00 36.48 2.41
1866 2676 4.070630 AGATGATTTACAGCTCTGCTCC 57.929 45.455 0.00 0.00 41.75 4.70
1872 2682 2.808906 TACAGCTCTGCTCCTCTGTA 57.191 50.000 0.00 0.00 40.01 2.74
1879 2689 4.714308 AGCTCTGCTCCTCTGTAAGTTAAT 59.286 41.667 0.00 0.00 30.62 1.40
1885 2695 6.707290 TGCTCCTCTGTAAGTTAATTGCTTA 58.293 36.000 0.00 0.00 33.76 3.09
1889 2699 7.903145 TCCTCTGTAAGTTAATTGCTTACTGA 58.097 34.615 24.80 24.80 45.86 3.41
1948 2758 5.084519 ACACTTGGTTATGTCAGGAGACTA 58.915 41.667 0.00 0.00 45.20 2.59
1949 2759 5.186021 ACACTTGGTTATGTCAGGAGACTAG 59.814 44.000 0.00 0.00 45.20 2.57
2007 2822 6.558775 AGATGGACTATATTAGTGCCAAAGGA 59.441 38.462 4.10 0.00 45.30 3.36
2059 2874 8.786826 ACATTTGATCAAATCATGAAAGCAAT 57.213 26.923 27.08 3.74 42.54 3.56
2094 2911 3.824443 GGGAGCTAGGATTAGAGTCTGAC 59.176 52.174 1.86 0.00 0.00 3.51
2097 2914 3.888930 AGCTAGGATTAGAGTCTGACAGC 59.111 47.826 10.88 6.71 0.00 4.40
2102 2920 3.440228 GATTAGAGTCTGACAGCGGAAC 58.560 50.000 10.88 0.00 0.00 3.62
2118 2936 3.613737 GCGGAACTACGTAGCAATTACAA 59.386 43.478 22.40 0.00 35.98 2.41
2188 3007 4.081752 TCCTGAACTCAGAGATGAGCTTTC 60.082 45.833 3.79 3.97 46.59 2.62
2193 3012 6.426328 TGAACTCAGAGATGAGCTTTCTTTTC 59.574 38.462 3.79 1.49 39.42 2.29
2229 3052 7.823745 AAAGGCTTTGAACTGAATTTCTCTA 57.176 32.000 12.53 0.00 0.00 2.43
2232 3055 6.073003 AGGCTTTGAACTGAATTTCTCTAACG 60.073 38.462 0.00 0.00 0.00 3.18
2252 3075 5.032327 ACGTTGAAAGGTTCTCCTAGTTT 57.968 39.130 0.00 0.00 44.35 2.66
2259 3082 6.014499 TGAAAGGTTCTCCTAGTTTACTCCTG 60.014 42.308 0.00 0.00 44.35 3.86
2433 3262 6.915843 AGCCTACAAAAACGTCTTACATTTTG 59.084 34.615 15.70 15.70 44.34 2.44
2451 3280 7.690256 ACATTTTGAGATGGAGGTAGTACTTT 58.310 34.615 0.00 0.00 0.00 2.66
2460 3289 6.585695 TGGAGGTAGTACTTTTGTAGTGAG 57.414 41.667 0.00 0.00 38.84 3.51
2461 3290 6.073314 TGGAGGTAGTACTTTTGTAGTGAGT 58.927 40.000 0.00 0.00 38.84 3.41
2462 3291 7.233632 TGGAGGTAGTACTTTTGTAGTGAGTA 58.766 38.462 0.00 0.00 38.84 2.59
2464 3293 7.362487 GGAGGTAGTACTTTTGTAGTGAGTACC 60.362 44.444 0.00 0.00 44.18 3.34
2465 3294 7.237255 AGGTAGTACTTTTGTAGTGAGTACCT 58.763 38.462 0.00 0.00 44.18 3.08
2466 3295 7.727634 AGGTAGTACTTTTGTAGTGAGTACCTT 59.272 37.037 0.00 0.00 44.18 3.50
2502 3331 2.838637 AGTGAGTAGCTAGAAGGCCT 57.161 50.000 0.00 0.00 0.00 5.19
2597 3454 2.252535 ATGCCCACTTATTTTGCCCT 57.747 45.000 0.00 0.00 0.00 5.19
2605 3462 6.128035 GCCCACTTATTTTGCCCTTTTATTTG 60.128 38.462 0.00 0.00 0.00 2.32
2613 3470 5.359194 TTGCCCTTTTATTTGTTGAACCA 57.641 34.783 0.00 0.00 0.00 3.67
2735 3596 6.667414 TGGAAATTAATAGCAACATGAACCCT 59.333 34.615 0.00 0.00 0.00 4.34
2736 3597 6.980397 GGAAATTAATAGCAACATGAACCCTG 59.020 38.462 0.00 0.00 0.00 4.45
2739 3600 2.584835 TAGCAACATGAACCCTGCTT 57.415 45.000 0.00 0.00 42.37 3.91
2772 3636 7.018826 CCAAGCACTTGCAATTCATATTTTTG 58.981 34.615 0.00 0.00 45.16 2.44
2795 3660 4.822350 GGGATCTTAATTACTTGCTGACCC 59.178 45.833 0.00 0.00 0.00 4.46
2960 3846 8.042515 CCCAGATACAAAAACCAAAATGATGAT 58.957 33.333 0.00 0.00 0.00 2.45
3163 5360 1.337260 ACGAGCAAACCAGCTGAGTAG 60.337 52.381 17.39 8.95 46.75 2.57
3173 5370 1.216710 GCTGAGTAGCCGCTCAAGT 59.783 57.895 0.00 0.00 43.92 3.16
3174 5371 0.804156 GCTGAGTAGCCGCTCAAGTC 60.804 60.000 0.00 0.00 43.92 3.01
3177 5374 2.621055 CTGAGTAGCCGCTCAAGTCTAT 59.379 50.000 0.00 0.00 43.92 1.98
3190 5387 6.703607 CGCTCAAGTCTATCCAGTTGAATAAT 59.296 38.462 0.00 0.00 35.69 1.28
3201 5398 7.707624 TCCAGTTGAATAATGATTTCAGCTT 57.292 32.000 0.81 0.00 41.05 3.74
3206 5403 6.122850 TGAATAATGATTTCAGCTTCCGTG 57.877 37.500 0.00 0.00 0.00 4.94
3216 5414 4.585955 TCAGCTTCCGTGATTCCTATAC 57.414 45.455 0.00 0.00 0.00 1.47
3232 5430 3.498397 CCTATACGATTCCCATGTGCAAC 59.502 47.826 0.00 0.00 37.35 4.17
3265 5470 8.588290 AGGTTGTTTATGCATTATAGGAAACA 57.412 30.769 15.75 15.75 0.00 2.83
3272 5477 3.753797 TGCATTATAGGAAACAACACGCA 59.246 39.130 0.00 0.00 0.00 5.24
3287 5492 1.935873 CACGCATGATGTTGTAGAGGG 59.064 52.381 0.00 0.00 0.00 4.30
3288 5493 1.134401 ACGCATGATGTTGTAGAGGGG 60.134 52.381 0.00 0.00 0.00 4.79
3292 5497 2.642171 TGATGTTGTAGAGGGGGAGT 57.358 50.000 0.00 0.00 0.00 3.85
3293 5498 2.187958 TGATGTTGTAGAGGGGGAGTG 58.812 52.381 0.00 0.00 0.00 3.51
3296 5501 0.903236 GTTGTAGAGGGGGAGTGACC 59.097 60.000 0.00 0.00 38.08 4.02
3330 5535 7.368480 AGCATCTCAAAATTGGTAAATTTGC 57.632 32.000 0.00 0.00 43.63 3.68
3332 5537 6.128580 GCATCTCAAAATTGGTAAATTTGCGT 60.129 34.615 0.00 0.00 43.63 5.24
3334 5539 7.401484 TCTCAAAATTGGTAAATTTGCGTTC 57.599 32.000 0.00 0.00 43.63 3.95
3342 5547 4.214545 TGGTAAATTTGCGTTCTTGATCGT 59.785 37.500 0.00 0.00 0.00 3.73
3343 5548 5.408909 TGGTAAATTTGCGTTCTTGATCGTA 59.591 36.000 0.00 0.00 0.00 3.43
3358 5747 5.105567 TGATCGTACTCCTCTTCTCTCTT 57.894 43.478 0.00 0.00 0.00 2.85
3360 5749 4.554960 TCGTACTCCTCTTCTCTCTTGA 57.445 45.455 0.00 0.00 0.00 3.02
3365 5754 6.127869 CGTACTCCTCTTCTCTCTTGATTTGA 60.128 42.308 0.00 0.00 0.00 2.69
3367 5756 5.083533 TCCTCTTCTCTCTTGATTTGAGC 57.916 43.478 0.00 0.00 0.00 4.26
3375 5764 3.328931 TCTCTTGATTTGAGCTTGAGGGT 59.671 43.478 0.00 0.00 0.00 4.34
3385 5774 3.591023 GAGCTTGAGGGTACAAGTTCTC 58.409 50.000 14.54 8.37 46.66 2.87
3386 5775 3.243724 AGCTTGAGGGTACAAGTTCTCT 58.756 45.455 0.00 0.00 45.98 3.10
3388 5777 3.330267 CTTGAGGGTACAAGTTCTCTGC 58.670 50.000 0.00 0.00 41.32 4.26
3389 5778 2.609747 TGAGGGTACAAGTTCTCTGCT 58.390 47.619 0.00 0.00 0.00 4.24
3390 5779 2.563179 TGAGGGTACAAGTTCTCTGCTC 59.437 50.000 0.00 0.00 0.00 4.26
3391 5780 1.903183 AGGGTACAAGTTCTCTGCTCC 59.097 52.381 0.00 0.00 0.00 4.70
3392 5781 1.903183 GGGTACAAGTTCTCTGCTCCT 59.097 52.381 0.00 0.00 0.00 3.69
3393 5782 2.354203 GGGTACAAGTTCTCTGCTCCTG 60.354 54.545 0.00 0.00 0.00 3.86
3394 5783 2.342179 GTACAAGTTCTCTGCTCCTGC 58.658 52.381 0.00 0.00 40.20 4.85
3395 5784 1.055040 ACAAGTTCTCTGCTCCTGCT 58.945 50.000 0.00 0.00 40.48 4.24
3396 5785 2.251818 ACAAGTTCTCTGCTCCTGCTA 58.748 47.619 0.00 0.00 40.48 3.49
3397 5786 2.634940 ACAAGTTCTCTGCTCCTGCTAA 59.365 45.455 0.00 0.00 40.48 3.09
3398 5787 3.260740 CAAGTTCTCTGCTCCTGCTAAG 58.739 50.000 0.00 0.00 40.48 2.18
3399 5788 1.830477 AGTTCTCTGCTCCTGCTAAGG 59.170 52.381 0.00 0.00 46.06 2.69
3400 5789 1.134551 GTTCTCTGCTCCTGCTAAGGG 60.135 57.143 0.00 0.00 44.62 3.95
3420 5809 2.158755 GGGAGCACTGCTATGGTGTATT 60.159 50.000 2.71 0.00 39.88 1.89
3427 5816 2.874701 CTGCTATGGTGTATTGGTGCTC 59.125 50.000 0.00 0.00 0.00 4.26
3436 5825 2.038952 TGTATTGGTGCTCAACTGCTCT 59.961 45.455 0.00 0.00 38.31 4.09
3451 5840 5.212532 ACTGCTCTTGCTATTCTATCCAG 57.787 43.478 0.00 0.00 40.48 3.86
3455 5844 4.314121 CTCTTGCTATTCTATCCAGTGCC 58.686 47.826 0.00 0.00 0.00 5.01
3456 5845 3.969976 TCTTGCTATTCTATCCAGTGCCT 59.030 43.478 0.00 0.00 0.00 4.75
3457 5846 4.039730 TCTTGCTATTCTATCCAGTGCCTC 59.960 45.833 0.00 0.00 0.00 4.70
3460 5849 3.576118 GCTATTCTATCCAGTGCCTCTGA 59.424 47.826 7.45 0.00 46.27 3.27
3461 5850 4.222588 GCTATTCTATCCAGTGCCTCTGAT 59.777 45.833 7.45 3.18 46.27 2.90
3462 5851 4.888326 ATTCTATCCAGTGCCTCTGATC 57.112 45.455 7.45 0.00 46.27 2.92
3463 5852 2.603021 TCTATCCAGTGCCTCTGATCC 58.397 52.381 7.45 0.00 46.27 3.36
3464 5853 2.091111 TCTATCCAGTGCCTCTGATCCA 60.091 50.000 7.45 0.00 46.27 3.41
3465 5854 1.588239 ATCCAGTGCCTCTGATCCAA 58.412 50.000 7.45 0.00 46.27 3.53
3468 5857 2.309755 TCCAGTGCCTCTGATCCAAAAT 59.690 45.455 7.45 0.00 46.27 1.82
3469 5858 3.523157 TCCAGTGCCTCTGATCCAAAATA 59.477 43.478 7.45 0.00 46.27 1.40
3471 5860 4.337555 CCAGTGCCTCTGATCCAAAATAAG 59.662 45.833 7.45 0.00 46.27 1.73
3472 5861 4.946157 CAGTGCCTCTGATCCAAAATAAGT 59.054 41.667 0.45 0.00 46.27 2.24
3474 5863 4.702131 GTGCCTCTGATCCAAAATAAGTGT 59.298 41.667 0.00 0.00 0.00 3.55
3475 5864 5.183904 GTGCCTCTGATCCAAAATAAGTGTT 59.816 40.000 0.00 0.00 0.00 3.32
3477 5866 6.267471 TGCCTCTGATCCAAAATAAGTGTTTT 59.733 34.615 0.00 0.00 0.00 2.43
3478 5867 6.587608 GCCTCTGATCCAAAATAAGTGTTTTG 59.412 38.462 6.35 6.35 44.63 2.44
3496 5885 9.495572 AGTGTTTTGGTTTTAGTTCAAATTTGA 57.504 25.926 16.91 16.91 34.92 2.69
3511 5900 8.616377 TTCAAATTTGAATTAAAACGACGACA 57.384 26.923 26.01 2.16 41.88 4.35
3512 5901 8.041395 TCAAATTTGAATTAAAACGACGACAC 57.959 30.769 18.45 0.00 33.55 3.67
3513 5902 7.911205 TCAAATTTGAATTAAAACGACGACACT 59.089 29.630 18.45 0.00 33.55 3.55
3514 5903 8.528295 CAAATTTGAATTAAAACGACGACACTT 58.472 29.630 13.08 0.00 0.00 3.16
3515 5904 9.719279 AAATTTGAATTAAAACGACGACACTTA 57.281 25.926 0.00 0.00 0.00 2.24
3516 5905 9.887406 AATTTGAATTAAAACGACGACACTTAT 57.113 25.926 0.00 0.00 0.00 1.73
3517 5906 9.887406 ATTTGAATTAAAACGACGACACTTATT 57.113 25.926 0.00 0.00 0.00 1.40
3518 5907 9.719279 TTTGAATTAAAACGACGACACTTATTT 57.281 25.926 0.00 0.00 0.00 1.40
3519 5908 9.719279 TTGAATTAAAACGACGACACTTATTTT 57.281 25.926 0.00 0.00 0.00 1.82
3520 5909 9.160576 TGAATTAAAACGACGACACTTATTTTG 57.839 29.630 0.00 0.00 0.00 2.44
3521 5910 8.496872 AATTAAAACGACGACACTTATTTTGG 57.503 30.769 0.00 0.00 0.00 3.28
3522 5911 5.738118 AAAACGACGACACTTATTTTGGA 57.262 34.783 0.00 0.00 0.00 3.53
3523 5912 5.934935 AAACGACGACACTTATTTTGGAT 57.065 34.783 0.00 0.00 0.00 3.41
3524 5913 5.526010 AACGACGACACTTATTTTGGATC 57.474 39.130 0.00 0.00 0.00 3.36
3525 5914 4.562082 ACGACGACACTTATTTTGGATCA 58.438 39.130 0.00 0.00 0.00 2.92
3526 5915 4.625742 ACGACGACACTTATTTTGGATCAG 59.374 41.667 0.00 0.00 0.00 2.90
3527 5916 4.862574 CGACGACACTTATTTTGGATCAGA 59.137 41.667 0.00 0.00 0.00 3.27
3528 5917 5.004821 CGACGACACTTATTTTGGATCAGAG 59.995 44.000 0.00 0.00 0.00 3.35
3529 5918 5.178797 ACGACACTTATTTTGGATCAGAGG 58.821 41.667 0.00 0.00 0.00 3.69
3530 5919 4.572389 CGACACTTATTTTGGATCAGAGGG 59.428 45.833 0.00 0.00 0.00 4.30
3531 5920 5.626809 CGACACTTATTTTGGATCAGAGGGA 60.627 44.000 0.00 0.00 0.00 4.20
3532 5921 5.749462 ACACTTATTTTGGATCAGAGGGAG 58.251 41.667 0.00 0.00 0.00 4.30
3533 5922 5.251700 ACACTTATTTTGGATCAGAGGGAGT 59.748 40.000 0.00 0.00 0.00 3.85
3534 5923 6.443849 ACACTTATTTTGGATCAGAGGGAGTA 59.556 38.462 0.00 0.00 0.00 2.59
3535 5924 7.127955 ACACTTATTTTGGATCAGAGGGAGTAT 59.872 37.037 0.00 0.00 0.00 2.12
3536 5925 7.659390 CACTTATTTTGGATCAGAGGGAGTATC 59.341 40.741 0.00 0.00 0.00 2.24
3537 5926 7.348274 ACTTATTTTGGATCAGAGGGAGTATCA 59.652 37.037 0.00 0.00 36.25 2.15
3538 5927 6.581388 ATTTTGGATCAGAGGGAGTATCAA 57.419 37.500 0.00 0.00 36.25 2.57
3539 5928 6.581388 TTTTGGATCAGAGGGAGTATCAAT 57.419 37.500 0.00 0.00 36.25 2.57
3540 5929 6.581388 TTTGGATCAGAGGGAGTATCAATT 57.419 37.500 0.00 0.00 36.25 2.32
3541 5930 7.690454 TTTGGATCAGAGGGAGTATCAATTA 57.310 36.000 0.00 0.00 36.25 1.40
3542 5931 7.690454 TTGGATCAGAGGGAGTATCAATTAA 57.310 36.000 0.00 0.00 36.25 1.40
3543 5932 7.878621 TGGATCAGAGGGAGTATCAATTAAT 57.121 36.000 0.00 0.00 36.25 1.40
3544 5933 7.683578 TGGATCAGAGGGAGTATCAATTAATG 58.316 38.462 0.00 0.00 36.25 1.90
3545 5934 7.108847 GGATCAGAGGGAGTATCAATTAATGG 58.891 42.308 0.00 0.00 36.25 3.16
3546 5935 7.256835 GGATCAGAGGGAGTATCAATTAATGGT 60.257 40.741 0.00 0.00 36.25 3.55
3547 5936 7.451731 TCAGAGGGAGTATCAATTAATGGTT 57.548 36.000 0.00 0.00 36.25 3.67
3548 5937 8.561536 TCAGAGGGAGTATCAATTAATGGTTA 57.438 34.615 0.00 0.00 36.25 2.85
3549 5938 8.998814 TCAGAGGGAGTATCAATTAATGGTTAA 58.001 33.333 0.00 0.00 36.25 2.01
3550 5939 9.799106 CAGAGGGAGTATCAATTAATGGTTAAT 57.201 33.333 0.00 0.00 37.43 1.40
3599 5988 7.872113 AGGTTGATCTTTTAGAATAAGCTGG 57.128 36.000 0.00 0.00 33.65 4.85
3600 5989 6.830838 AGGTTGATCTTTTAGAATAAGCTGGG 59.169 38.462 0.00 0.00 33.65 4.45
3601 5990 6.039829 GGTTGATCTTTTAGAATAAGCTGGGG 59.960 42.308 0.00 0.00 0.00 4.96
3602 5991 6.575244 TGATCTTTTAGAATAAGCTGGGGA 57.425 37.500 0.00 0.00 0.00 4.81
3603 5992 6.595682 TGATCTTTTAGAATAAGCTGGGGAG 58.404 40.000 0.00 0.00 0.00 4.30
3604 5993 6.386927 TGATCTTTTAGAATAAGCTGGGGAGA 59.613 38.462 0.00 0.00 0.00 3.71
3605 5994 6.240549 TCTTTTAGAATAAGCTGGGGAGAG 57.759 41.667 0.00 0.00 0.00 3.20
3606 5995 5.131142 TCTTTTAGAATAAGCTGGGGAGAGG 59.869 44.000 0.00 0.00 0.00 3.69
3607 5996 1.813102 AGAATAAGCTGGGGAGAGGG 58.187 55.000 0.00 0.00 0.00 4.30
3608 5997 0.109532 GAATAAGCTGGGGAGAGGGC 59.890 60.000 0.00 0.00 0.00 5.19
3609 5998 0.624500 AATAAGCTGGGGAGAGGGCA 60.625 55.000 0.00 0.00 0.00 5.36
3610 5999 1.059006 ATAAGCTGGGGAGAGGGCAG 61.059 60.000 0.00 0.00 0.00 4.85
3613 6002 3.013932 CTGGGGAGAGGGCAGCTT 61.014 66.667 0.00 0.00 0.00 3.74
3614 6003 1.690633 CTGGGGAGAGGGCAGCTTA 60.691 63.158 0.00 0.00 0.00 3.09
3615 6004 1.004758 TGGGGAGAGGGCAGCTTAT 59.995 57.895 0.00 0.00 0.00 1.73
3616 6005 0.624500 TGGGGAGAGGGCAGCTTATT 60.625 55.000 0.00 0.00 0.00 1.40
3617 6006 0.553333 GGGGAGAGGGCAGCTTATTT 59.447 55.000 0.00 0.00 0.00 1.40
3618 6007 1.477740 GGGGAGAGGGCAGCTTATTTC 60.478 57.143 0.00 0.00 0.00 2.17
3619 6008 1.477740 GGGAGAGGGCAGCTTATTTCC 60.478 57.143 0.00 0.00 0.00 3.13
3620 6009 1.212935 GGAGAGGGCAGCTTATTTCCA 59.787 52.381 0.00 0.00 0.00 3.53
3621 6010 2.293170 GAGAGGGCAGCTTATTTCCAC 58.707 52.381 0.00 0.00 0.00 4.02
3622 6011 1.635487 AGAGGGCAGCTTATTTCCACA 59.365 47.619 0.00 0.00 0.00 4.17
3623 6012 2.019984 GAGGGCAGCTTATTTCCACAG 58.980 52.381 0.00 0.00 0.00 3.66
3624 6013 0.457443 GGGCAGCTTATTTCCACAGC 59.543 55.000 0.00 0.00 0.00 4.40
3625 6014 1.467920 GGCAGCTTATTTCCACAGCT 58.532 50.000 0.00 0.00 45.02 4.24
3626 6015 2.643551 GGCAGCTTATTTCCACAGCTA 58.356 47.619 0.00 0.00 42.15 3.32
3627 6016 2.615912 GGCAGCTTATTTCCACAGCTAG 59.384 50.000 0.00 0.00 42.15 3.42
3628 6017 2.032675 GCAGCTTATTTCCACAGCTAGC 59.967 50.000 6.62 6.62 42.15 3.42
3629 6018 3.539604 CAGCTTATTTCCACAGCTAGCT 58.460 45.455 12.68 12.68 42.15 3.32
3630 6019 4.697514 CAGCTTATTTCCACAGCTAGCTA 58.302 43.478 18.86 0.00 42.15 3.32
3631 6020 5.303971 CAGCTTATTTCCACAGCTAGCTAT 58.696 41.667 18.86 2.05 42.15 2.97
3632 6021 6.459066 CAGCTTATTTCCACAGCTAGCTATA 58.541 40.000 18.86 7.74 42.15 1.31
3633 6022 6.931281 CAGCTTATTTCCACAGCTAGCTATAA 59.069 38.462 18.86 14.88 42.15 0.98
3634 6023 7.117523 CAGCTTATTTCCACAGCTAGCTATAAG 59.882 40.741 25.32 25.32 42.15 1.73
3635 6024 6.128418 GCTTATTTCCACAGCTAGCTATAAGC 60.128 42.308 31.94 31.94 40.76 3.09
3636 6025 3.753294 TTCCACAGCTAGCTATAAGCC 57.247 47.619 18.86 0.00 43.77 4.35
3637 6026 1.971357 TCCACAGCTAGCTATAAGCCC 59.029 52.381 18.86 0.00 43.77 5.19
3638 6027 1.974236 CCACAGCTAGCTATAAGCCCT 59.026 52.381 18.86 0.00 43.77 5.19
3639 6028 3.165875 CCACAGCTAGCTATAAGCCCTA 58.834 50.000 18.86 0.00 43.77 3.53
3640 6029 3.578716 CCACAGCTAGCTATAAGCCCTAA 59.421 47.826 18.86 0.00 43.77 2.69
3641 6030 4.040461 CCACAGCTAGCTATAAGCCCTAAA 59.960 45.833 18.86 0.00 43.77 1.85
3642 6031 5.454755 CCACAGCTAGCTATAAGCCCTAAAA 60.455 44.000 18.86 0.00 43.77 1.52
3643 6032 5.698545 CACAGCTAGCTATAAGCCCTAAAAG 59.301 44.000 18.86 1.94 43.77 2.27
3644 6033 5.602978 ACAGCTAGCTATAAGCCCTAAAAGA 59.397 40.000 18.86 0.00 43.77 2.52
3645 6034 6.099845 ACAGCTAGCTATAAGCCCTAAAAGAA 59.900 38.462 18.86 0.00 43.77 2.52
3646 6035 6.425417 CAGCTAGCTATAAGCCCTAAAAGAAC 59.575 42.308 18.86 0.00 43.77 3.01
3647 6036 6.327887 AGCTAGCTATAAGCCCTAAAAGAACT 59.672 38.462 17.69 0.00 43.77 3.01
3648 6037 6.425417 GCTAGCTATAAGCCCTAAAAGAACTG 59.575 42.308 7.70 0.00 43.77 3.16
3649 6038 5.685728 AGCTATAAGCCCTAAAAGAACTGG 58.314 41.667 0.00 0.00 43.77 4.00
3650 6039 4.276183 GCTATAAGCCCTAAAAGAACTGGC 59.724 45.833 0.00 0.00 42.48 4.85
3651 6040 1.924731 AAGCCCTAAAAGAACTGGCC 58.075 50.000 0.00 0.00 43.18 5.36
3652 6041 0.039764 AGCCCTAAAAGAACTGGCCC 59.960 55.000 0.00 0.00 43.18 5.80
3653 6042 0.039764 GCCCTAAAAGAACTGGCCCT 59.960 55.000 0.00 0.00 36.07 5.19
3654 6043 1.283905 GCCCTAAAAGAACTGGCCCTA 59.716 52.381 0.00 0.00 36.07 3.53
3655 6044 2.291346 GCCCTAAAAGAACTGGCCCTAA 60.291 50.000 0.00 0.00 36.07 2.69
3656 6045 3.621558 CCCTAAAAGAACTGGCCCTAAG 58.378 50.000 0.00 0.00 0.00 2.18
3657 6046 3.017442 CCTAAAAGAACTGGCCCTAAGC 58.983 50.000 0.00 0.00 42.60 3.09
3658 6047 2.675658 AAAAGAACTGGCCCTAAGCA 57.324 45.000 0.00 0.00 46.50 3.91
3659 6048 2.675658 AAAGAACTGGCCCTAAGCAA 57.324 45.000 0.00 0.00 46.50 3.91
3660 6049 2.907458 AAGAACTGGCCCTAAGCAAT 57.093 45.000 0.00 0.00 46.50 3.56
3661 6050 2.134789 AGAACTGGCCCTAAGCAATG 57.865 50.000 0.00 0.00 46.50 2.82
3662 6051 0.457443 GAACTGGCCCTAAGCAATGC 59.543 55.000 0.00 0.00 46.50 3.56
3663 6052 0.251742 AACTGGCCCTAAGCAATGCA 60.252 50.000 8.35 0.00 46.50 3.96
3664 6053 0.251742 ACTGGCCCTAAGCAATGCAA 60.252 50.000 8.35 0.00 46.50 4.08
3665 6054 0.458669 CTGGCCCTAAGCAATGCAAG 59.541 55.000 8.35 4.21 46.50 4.01
3713 6102 5.818136 TGAAAGAGAAACTCACCTTGTTG 57.182 39.130 0.00 0.00 32.06 3.33
3714 6103 5.253330 TGAAAGAGAAACTCACCTTGTTGT 58.747 37.500 0.00 0.00 32.06 3.32
3730 6119 8.132362 CACCTTGTTGTGCTTATTAAACAGTAA 58.868 33.333 0.00 0.00 34.28 2.24
3731 6120 8.132995 ACCTTGTTGTGCTTATTAAACAGTAAC 58.867 33.333 0.00 0.00 34.28 2.50
3732 6121 8.349983 CCTTGTTGTGCTTATTAAACAGTAACT 58.650 33.333 0.00 0.00 34.28 2.24
3734 6123 9.724839 TTGTTGTGCTTATTAAACAGTAACTTC 57.275 29.630 0.00 0.00 34.28 3.01
3735 6124 8.894731 TGTTGTGCTTATTAAACAGTAACTTCA 58.105 29.630 0.00 0.00 0.00 3.02
3736 6125 9.724839 GTTGTGCTTATTAAACAGTAACTTCAA 57.275 29.630 0.00 0.00 0.00 2.69
3737 6126 9.724839 TTGTGCTTATTAAACAGTAACTTCAAC 57.275 29.630 0.00 0.00 0.00 3.18
3738 6127 9.116067 TGTGCTTATTAAACAGTAACTTCAACT 57.884 29.630 0.00 0.00 0.00 3.16
3740 6129 8.073768 TGCTTATTAAACAGTAACTTCAACTGC 58.926 33.333 3.24 0.00 46.73 4.40
3742 6131 6.854496 ATTAAACAGTAACTTCAACTGCGA 57.146 33.333 3.24 0.00 46.73 5.10
3749 6562 5.177511 CAGTAACTTCAACTGCGATTTCTGA 59.822 40.000 0.00 0.00 38.08 3.27
3785 6598 7.368833 TCTCGAGTTTTAGAGAAGTAAACCTG 58.631 38.462 13.13 0.00 40.18 4.00
3786 6599 7.014038 TCTCGAGTTTTAGAGAAGTAAACCTGT 59.986 37.037 13.13 0.00 40.18 4.00
3789 6602 9.074443 CGAGTTTTAGAGAAGTAAACCTGTATC 57.926 37.037 0.00 0.00 33.38 2.24
3791 6604 9.930693 AGTTTTAGAGAAGTAAACCTGTATCTG 57.069 33.333 0.00 0.00 33.38 2.90
3792 6605 9.708092 GTTTTAGAGAAGTAAACCTGTATCTGT 57.292 33.333 0.00 0.00 0.00 3.41
3796 6609 8.596781 AGAGAAGTAAACCTGTATCTGTATGT 57.403 34.615 0.00 0.00 0.00 2.29
3826 6639 2.099141 TGAGAGAATTTGCCGTCCAG 57.901 50.000 0.00 0.00 0.00 3.86
3833 6646 5.123979 AGAGAATTTGCCGTCCAGTTTATTC 59.876 40.000 0.00 0.00 0.00 1.75
3834 6647 4.157840 AGAATTTGCCGTCCAGTTTATTCC 59.842 41.667 0.00 0.00 0.00 3.01
3839 6652 2.773487 CCGTCCAGTTTATTCCACACA 58.227 47.619 0.00 0.00 0.00 3.72
3840 6653 3.142951 CCGTCCAGTTTATTCCACACAA 58.857 45.455 0.00 0.00 0.00 3.33
3876 6694 0.039035 TGGATTTGGGGAAGGGAACG 59.961 55.000 0.00 0.00 0.00 3.95
3879 7060 0.251608 ATTTGGGGAAGGGAACGTGG 60.252 55.000 0.00 0.00 0.00 4.94
3886 7067 0.608035 GAAGGGAACGTGGCATGGAA 60.608 55.000 12.05 0.00 0.00 3.53
3887 7068 0.039618 AAGGGAACGTGGCATGGAAT 59.960 50.000 12.05 0.00 0.00 3.01
3902 7086 1.276989 TGGAATGAAGGGACGTGGTAC 59.723 52.381 0.00 0.00 0.00 3.34
3935 7119 0.179081 GGTACTTGGATCGAGTGGGC 60.179 60.000 9.84 2.22 29.93 5.36
3936 7120 0.179081 GTACTTGGATCGAGTGGGCC 60.179 60.000 0.00 0.00 29.93 5.80
3937 7121 0.616395 TACTTGGATCGAGTGGGCCA 60.616 55.000 0.00 0.00 29.93 5.36
3938 7122 1.450312 CTTGGATCGAGTGGGCCAC 60.450 63.158 29.32 29.32 34.10 5.01
3939 7123 2.876368 CTTGGATCGAGTGGGCCACC 62.876 65.000 32.30 21.82 34.49 4.61
4001 7196 1.671054 GCACGAGGCAGCCTTGTAA 60.671 57.895 31.02 0.00 45.74 2.41
4006 7201 1.608025 CGAGGCAGCCTTGTAAACTGA 60.608 52.381 17.46 0.00 31.76 3.41
4056 7256 9.113838 CTTGCACTTACACTATCCATCTTTATT 57.886 33.333 0.00 0.00 0.00 1.40
4058 7258 9.542462 TGCACTTACACTATCCATCTTTATTAC 57.458 33.333 0.00 0.00 0.00 1.89
4077 7277 6.696441 ATTACTAGGAGTAGTTCTGAACCG 57.304 41.667 16.48 0.00 40.23 4.44
4094 7294 3.208747 ACCGAACTTTCAGGTTCACAT 57.791 42.857 7.87 0.00 43.92 3.21
4102 7302 6.134535 ACTTTCAGGTTCACATACCCATTA 57.865 37.500 0.00 0.00 39.08 1.90
4103 7303 6.548321 ACTTTCAGGTTCACATACCCATTAA 58.452 36.000 0.00 0.00 39.08 1.40
4104 7304 6.433093 ACTTTCAGGTTCACATACCCATTAAC 59.567 38.462 0.00 0.00 39.08 2.01
4119 7321 1.080638 TTAACATGGGGGCCAGACTT 58.919 50.000 4.39 0.00 36.75 3.01
4122 7324 2.943265 ATGGGGGCCAGACTTGCT 60.943 61.111 4.39 0.00 36.75 3.91
4125 7327 2.674380 GGGGCCAGACTTGCTGTG 60.674 66.667 4.39 0.00 43.33 3.66
4128 7330 1.109323 GGGCCAGACTTGCTGTGTTT 61.109 55.000 4.39 0.00 43.33 2.83
4131 7333 2.463876 GCCAGACTTGCTGTGTTTTTC 58.536 47.619 0.00 0.00 43.33 2.29
4133 7335 2.541588 CCAGACTTGCTGTGTTTTTCGG 60.542 50.000 0.00 0.00 43.33 4.30
4138 7340 3.311596 ACTTGCTGTGTTTTTCGGAGTAC 59.688 43.478 0.00 0.00 0.00 2.73
4139 7341 2.907634 TGCTGTGTTTTTCGGAGTACA 58.092 42.857 0.00 0.00 0.00 2.90
4141 7343 3.311322 TGCTGTGTTTTTCGGAGTACAAG 59.689 43.478 0.00 0.00 0.00 3.16
4146 7348 3.181477 TGTTTTTCGGAGTACAAGACGGA 60.181 43.478 0.00 0.00 0.00 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 8.718102 ATACACAACCACTATTTCTCATACAC 57.282 34.615 0.00 0.00 0.00 2.90
144 147 8.201464 ACATACAAATGTTCCTGATGTATACGA 58.799 33.333 0.00 0.00 44.07 3.43
355 443 0.682532 TGCAGTGGTTTTCTGTGGCA 60.683 50.000 0.00 0.00 35.60 4.92
356 444 0.031178 CTGCAGTGGTTTTCTGTGGC 59.969 55.000 5.25 0.00 35.60 5.01
357 445 1.679139 TCTGCAGTGGTTTTCTGTGG 58.321 50.000 14.67 0.00 35.60 4.17
358 446 3.378112 TCTTTCTGCAGTGGTTTTCTGTG 59.622 43.478 14.67 0.00 35.60 3.66
359 447 3.620488 TCTTTCTGCAGTGGTTTTCTGT 58.380 40.909 14.67 0.00 35.60 3.41
403 493 2.012902 CTTATTCGCGGACGGAGGGT 62.013 60.000 6.13 0.00 40.63 4.34
414 504 6.889019 AAAGCTAGAAGTACACTTATTCGC 57.111 37.500 0.00 0.00 36.11 4.70
614 704 9.494479 GCGTACTTTTAACTTTTGTCTTAAGTT 57.506 29.630 1.63 0.00 45.19 2.66
639 729 1.436983 CCCTCCGTTCGCCAATAAGC 61.437 60.000 0.00 0.00 0.00 3.09
646 736 1.318158 TTCTACTCCCTCCGTTCGCC 61.318 60.000 0.00 0.00 0.00 5.54
650 740 2.289506 GCTTGTTTCTACTCCCTCCGTT 60.290 50.000 0.00 0.00 0.00 4.44
654 744 3.498777 GTGTTGCTTGTTTCTACTCCCTC 59.501 47.826 0.00 0.00 0.00 4.30
678 768 2.050985 GTTTGCACGCTGCTGGTC 60.051 61.111 10.54 0.00 45.31 4.02
765 855 1.405933 CCATGTCGACATTCTGAGGCA 60.406 52.381 28.04 0.00 33.61 4.75
790 880 2.359478 CGTGTGGGCCAAGGGTAC 60.359 66.667 8.40 1.76 0.00 3.34
888 993 2.282180 GGCTGTTTGGGAAGGCGA 60.282 61.111 0.00 0.00 0.00 5.54
891 996 1.971695 GGTCGGCTGTTTGGGAAGG 60.972 63.158 0.00 0.00 0.00 3.46
908 1016 1.845809 GCTGCCGTTCAGTTGACTGG 61.846 60.000 10.97 0.00 44.66 4.00
931 1039 3.240134 GACAGGCTGGGACGCTTGA 62.240 63.158 20.34 0.00 38.02 3.02
1162 1270 2.123077 AGATCAGAGGAGGCGGGG 60.123 66.667 0.00 0.00 0.00 5.73
1241 1349 2.027561 CGTCCTCATAAACCCTGTTCCA 60.028 50.000 0.00 0.00 0.00 3.53
1268 1376 2.700897 AGAATATCTCCCGGAACCACTG 59.299 50.000 0.73 0.00 0.00 3.66
1299 1407 2.417936 GGATCGCGTCCTCCTTCC 59.582 66.667 17.12 6.10 44.16 3.46
1393 1871 0.179161 CAAGGTACAGAGACGCCGAG 60.179 60.000 0.00 0.00 0.00 4.63
1394 1872 0.607217 TCAAGGTACAGAGACGCCGA 60.607 55.000 0.00 0.00 0.00 5.54
1395 1873 0.456221 ATCAAGGTACAGAGACGCCG 59.544 55.000 0.00 0.00 0.00 6.46
1396 1874 2.094182 TCAATCAAGGTACAGAGACGCC 60.094 50.000 0.00 0.00 0.00 5.68
1397 1875 3.232213 TCAATCAAGGTACAGAGACGC 57.768 47.619 0.00 0.00 0.00 5.19
1399 1877 5.163713 GCCAATTCAATCAAGGTACAGAGAC 60.164 44.000 0.00 0.00 0.00 3.36
1400 1878 4.943705 GCCAATTCAATCAAGGTACAGAGA 59.056 41.667 0.00 0.00 0.00 3.10
1401 1879 4.201851 CGCCAATTCAATCAAGGTACAGAG 60.202 45.833 0.00 0.00 0.00 3.35
1402 1880 3.689161 CGCCAATTCAATCAAGGTACAGA 59.311 43.478 0.00 0.00 0.00 3.41
1403 1881 3.731867 GCGCCAATTCAATCAAGGTACAG 60.732 47.826 0.00 0.00 0.00 2.74
1404 1882 2.163412 GCGCCAATTCAATCAAGGTACA 59.837 45.455 0.00 0.00 0.00 2.90
1408 1886 1.747355 AGAGCGCCAATTCAATCAAGG 59.253 47.619 2.29 0.00 0.00 3.61
1409 1887 3.128242 AGAAGAGCGCCAATTCAATCAAG 59.872 43.478 16.29 0.00 0.00 3.02
1410 1888 3.084039 AGAAGAGCGCCAATTCAATCAA 58.916 40.909 16.29 0.00 0.00 2.57
1411 1889 2.679837 GAGAAGAGCGCCAATTCAATCA 59.320 45.455 16.29 0.00 0.00 2.57
1412 1890 2.032675 GGAGAAGAGCGCCAATTCAATC 59.967 50.000 16.29 8.03 36.33 2.67
1419 1897 0.740868 CAATCGGAGAAGAGCGCCAA 60.741 55.000 2.29 0.00 43.58 4.52
1459 2053 0.539438 TGGGCAGTGGAAACATGGAC 60.539 55.000 0.00 0.00 46.14 4.02
1463 2057 1.002315 GCAATTGGGCAGTGGAAACAT 59.998 47.619 7.72 0.00 46.14 2.71
1494 2093 7.656707 AAACATCAATTTCAACATAAGCACC 57.343 32.000 0.00 0.00 0.00 5.01
1512 2111 6.603095 AGTAAGCATTTCGACTCAAAACATC 58.397 36.000 0.00 0.00 0.00 3.06
1574 2188 9.533253 AAGTCAATTTCAGTTTTCAAATACTGG 57.467 29.630 11.69 0.00 41.58 4.00
1635 2363 4.580167 TGAAACATCTACAAACTGCTTGCT 59.420 37.500 0.00 0.00 38.75 3.91
1636 2364 4.858935 TGAAACATCTACAAACTGCTTGC 58.141 39.130 0.00 0.00 38.75 4.01
1640 2368 5.280945 TGCTTTGAAACATCTACAAACTGC 58.719 37.500 0.00 0.00 31.67 4.40
1641 2369 6.498304 ACTGCTTTGAAACATCTACAAACTG 58.502 36.000 0.00 0.00 31.67 3.16
1645 2373 6.862209 ACAAACTGCTTTGAAACATCTACAA 58.138 32.000 5.51 0.00 39.43 2.41
1647 2375 7.861630 TCTACAAACTGCTTTGAAACATCTAC 58.138 34.615 5.51 0.00 39.43 2.59
1648 2376 8.445275 TTCTACAAACTGCTTTGAAACATCTA 57.555 30.769 5.51 0.00 39.43 1.98
1650 2378 8.482429 CAATTCTACAAACTGCTTTGAAACATC 58.518 33.333 5.51 0.00 39.43 3.06
1651 2379 7.981225 ACAATTCTACAAACTGCTTTGAAACAT 59.019 29.630 5.51 0.00 39.43 2.71
1652 2380 7.275341 CACAATTCTACAAACTGCTTTGAAACA 59.725 33.333 5.51 0.00 39.43 2.83
1653 2381 7.254084 CCACAATTCTACAAACTGCTTTGAAAC 60.254 37.037 5.51 0.00 39.43 2.78
1657 2386 5.830912 TCCACAATTCTACAAACTGCTTTG 58.169 37.500 0.00 0.00 42.33 2.77
1684 2413 6.919721 TGTGAAATGTAATTAAACAGGAGCC 58.080 36.000 0.00 0.00 33.67 4.70
1696 2426 6.604396 TGCAGAAGGATGATGTGAAATGTAAT 59.396 34.615 0.00 0.00 0.00 1.89
1707 2508 2.995283 TGGTTCTGCAGAAGGATGATG 58.005 47.619 29.13 0.00 34.27 3.07
1708 2509 3.947612 ATGGTTCTGCAGAAGGATGAT 57.052 42.857 29.13 13.31 34.27 2.45
1732 2533 3.754965 TGCTGTTGCTATCAAGGAAAGT 58.245 40.909 0.00 0.00 40.48 2.66
1737 2538 6.226052 TGATAGTATGCTGTTGCTATCAAGG 58.774 40.000 15.02 0.00 43.63 3.61
1773 2583 7.482169 AGGGTGAAAAGAAAAGGAATAATCC 57.518 36.000 0.00 0.00 46.98 3.01
1775 2585 9.601810 AACTAGGGTGAAAAGAAAAGGAATAAT 57.398 29.630 0.00 0.00 0.00 1.28
1778 2588 9.244292 GATAACTAGGGTGAAAAGAAAAGGAAT 57.756 33.333 0.00 0.00 0.00 3.01
1779 2589 8.221944 TGATAACTAGGGTGAAAAGAAAAGGAA 58.778 33.333 0.00 0.00 0.00 3.36
1780 2590 7.751646 TGATAACTAGGGTGAAAAGAAAAGGA 58.248 34.615 0.00 0.00 0.00 3.36
1781 2591 7.121315 CCTGATAACTAGGGTGAAAAGAAAAGG 59.879 40.741 0.00 0.00 0.00 3.11
1782 2592 7.362142 GCCTGATAACTAGGGTGAAAAGAAAAG 60.362 40.741 0.00 0.00 35.80 2.27
1783 2593 6.433093 GCCTGATAACTAGGGTGAAAAGAAAA 59.567 38.462 0.00 0.00 35.80 2.29
1784 2594 5.944007 GCCTGATAACTAGGGTGAAAAGAAA 59.056 40.000 0.00 0.00 35.80 2.52
1785 2595 5.013704 TGCCTGATAACTAGGGTGAAAAGAA 59.986 40.000 0.00 0.00 35.80 2.52
1786 2596 4.534500 TGCCTGATAACTAGGGTGAAAAGA 59.466 41.667 0.00 0.00 35.80 2.52
1787 2597 4.843728 TGCCTGATAACTAGGGTGAAAAG 58.156 43.478 0.00 0.00 35.80 2.27
1788 2598 4.843728 CTGCCTGATAACTAGGGTGAAAA 58.156 43.478 0.00 0.00 35.80 2.29
1793 2603 1.486726 GTGCTGCCTGATAACTAGGGT 59.513 52.381 0.00 0.00 35.80 4.34
1832 2642 8.572185 GCTGTAAATCATCTCTATGTAGTCTCA 58.428 37.037 0.00 0.00 34.50 3.27
1834 2644 8.704849 AGCTGTAAATCATCTCTATGTAGTCT 57.295 34.615 0.00 0.00 34.50 3.24
1841 2651 6.295236 GGAGCAGAGCTGTAAATCATCTCTAT 60.295 42.308 0.00 0.00 44.60 1.98
1856 2666 2.230130 ACTTACAGAGGAGCAGAGCT 57.770 50.000 0.00 0.00 43.88 4.09
1889 2699 9.265901 CCAGTCAGATCTGATAAACGATTAATT 57.734 33.333 27.51 0.00 42.18 1.40
1892 2702 7.582667 TCCAGTCAGATCTGATAAACGATTA 57.417 36.000 27.51 0.00 42.18 1.75
1893 2703 6.471233 TCCAGTCAGATCTGATAAACGATT 57.529 37.500 27.51 0.00 42.18 3.34
1895 2705 6.471233 AATCCAGTCAGATCTGATAAACGA 57.529 37.500 27.51 17.85 42.18 3.85
1904 2714 9.965902 AAGTGTAATTTTAATCCAGTCAGATCT 57.034 29.630 0.00 0.00 0.00 2.75
1982 2797 6.558775 TCCTTTGGCACTAATATAGTCCATCT 59.441 38.462 0.00 0.00 36.76 2.90
2007 2822 5.655394 TCCCTGTAGGAATCATACTAGCAT 58.345 41.667 6.62 0.00 43.78 3.79
2094 2911 1.922570 ATTGCTACGTAGTTCCGCTG 58.077 50.000 22.98 0.00 37.78 5.18
2097 2914 4.622313 TGTTGTAATTGCTACGTAGTTCCG 59.378 41.667 22.98 0.00 37.78 4.30
2102 2920 5.165676 TGGAGTGTTGTAATTGCTACGTAG 58.834 41.667 18.47 18.47 32.65 3.51
2188 3007 6.566197 AGCCTTTTGACTATCACTGAAAAG 57.434 37.500 0.00 0.00 34.70 2.27
2193 3012 5.947228 TCAAAGCCTTTTGACTATCACTG 57.053 39.130 0.00 0.00 45.77 3.66
2229 3052 4.684484 ACTAGGAGAACCTTTCAACGTT 57.316 40.909 0.00 0.00 45.36 3.99
2232 3055 6.649973 GGAGTAAACTAGGAGAACCTTTCAAC 59.350 42.308 0.00 0.00 45.36 3.18
2252 3075 5.222233 TGGTGATTTGGGAATTTCAGGAGTA 60.222 40.000 0.00 0.00 0.00 2.59
2259 3082 5.719173 TCGATTTGGTGATTTGGGAATTTC 58.281 37.500 0.00 0.00 0.00 2.17
2420 3249 5.178797 ACCTCCATCTCAAAATGTAAGACG 58.821 41.667 0.00 0.00 0.00 4.18
2433 3262 7.122353 TCACTACAAAAGTACTACCTCCATCTC 59.878 40.741 0.00 0.00 35.76 2.75
2477 3306 4.201970 GCCTTCTAGCTACTCACTACACTG 60.202 50.000 0.00 0.00 0.00 3.66
2502 3331 8.582437 CCTAGATGTACGAAATGGAACCTATTA 58.418 37.037 0.00 0.00 0.00 0.98
2597 3454 7.148407 ACACGCAAAATGGTTCAACAAATAAAA 60.148 29.630 0.00 0.00 0.00 1.52
2605 3462 1.857837 CCACACGCAAAATGGTTCAAC 59.142 47.619 0.00 0.00 0.00 3.18
2613 3470 3.658757 ATGCTTTACCACACGCAAAAT 57.341 38.095 0.00 0.00 35.83 1.82
2739 3600 1.436195 GCAAGTGCTTGGTGACGTCA 61.436 55.000 15.76 15.76 40.74 4.35
2772 3636 4.822350 GGGTCAGCAAGTAATTAAGATCCC 59.178 45.833 0.00 0.00 0.00 3.85
2795 3660 4.185467 AGCAGACAGAGTGATAGTGTTG 57.815 45.455 0.00 0.00 0.00 3.33
2859 3724 0.400213 CAGCTTGGTGGGTAACTGGA 59.600 55.000 0.00 0.00 0.00 3.86
3013 5210 2.038295 GCCTCTAGGTTGATATGCTGCT 59.962 50.000 0.00 0.00 37.57 4.24
3079 5276 1.002201 TCATTACCGGCGACAAGGAAA 59.998 47.619 9.30 0.00 0.00 3.13
3157 5354 2.124277 TAGACTTGAGCGGCTACTCA 57.876 50.000 0.60 5.28 44.84 3.41
3163 5360 0.461961 ACTGGATAGACTTGAGCGGC 59.538 55.000 0.00 0.00 0.00 6.53
3173 5370 9.060347 GCTGAAATCATTATTCAACTGGATAGA 57.940 33.333 0.00 0.00 36.43 1.98
3174 5371 9.064706 AGCTGAAATCATTATTCAACTGGATAG 57.935 33.333 0.00 0.00 36.43 2.08
3177 5374 7.148018 GGAAGCTGAAATCATTATTCAACTGGA 60.148 37.037 0.00 0.00 34.42 3.86
3190 5387 3.009723 GGAATCACGGAAGCTGAAATCA 58.990 45.455 0.00 0.00 0.00 2.57
3201 5398 3.508793 GGGAATCGTATAGGAATCACGGA 59.491 47.826 11.53 0.00 36.37 4.69
3206 5403 4.631813 GCACATGGGAATCGTATAGGAATC 59.368 45.833 0.00 0.59 0.00 2.52
3216 5414 1.429021 CCGTTGCACATGGGAATCG 59.571 57.895 0.00 0.00 0.00 3.34
3232 5430 2.752354 TGCATAAACAACCTTGATCCCG 59.248 45.455 0.00 0.00 0.00 5.14
3265 5470 3.002791 CCTCTACAACATCATGCGTGTT 58.997 45.455 5.68 9.62 40.23 3.32
3272 5477 2.774234 CACTCCCCCTCTACAACATCAT 59.226 50.000 0.00 0.00 0.00 2.45
3288 5493 1.134551 GCTCTCTGATTGGGTCACTCC 60.135 57.143 0.00 0.00 32.22 3.85
3292 5497 2.433604 GAGATGCTCTCTGATTGGGTCA 59.566 50.000 6.07 0.00 40.30 4.02
3293 5498 2.433604 TGAGATGCTCTCTGATTGGGTC 59.566 50.000 12.45 0.00 43.73 4.46
3296 5501 6.266323 CAATTTTGAGATGCTCTCTGATTGG 58.734 40.000 12.45 0.00 43.73 3.16
3298 5503 5.950549 ACCAATTTTGAGATGCTCTCTGATT 59.049 36.000 12.45 8.15 43.73 2.57
3300 5505 4.914983 ACCAATTTTGAGATGCTCTCTGA 58.085 39.130 12.45 0.00 43.73 3.27
3321 5526 6.531439 AGTACGATCAAGAACGCAAATTTAC 58.469 36.000 0.00 0.00 0.00 2.01
3328 5533 1.816835 AGGAGTACGATCAAGAACGCA 59.183 47.619 0.00 0.00 0.00 5.24
3329 5534 2.097791 AGAGGAGTACGATCAAGAACGC 59.902 50.000 0.00 0.00 0.00 4.84
3330 5535 4.095185 AGAAGAGGAGTACGATCAAGAACG 59.905 45.833 0.00 0.00 0.00 3.95
3332 5537 5.502079 AGAGAAGAGGAGTACGATCAAGAA 58.498 41.667 0.00 0.00 0.00 2.52
3334 5539 5.123227 AGAGAGAAGAGGAGTACGATCAAG 58.877 45.833 0.00 0.00 0.00 3.02
3342 5547 6.127479 GCTCAAATCAAGAGAGAAGAGGAGTA 60.127 42.308 0.00 0.00 35.09 2.59
3343 5548 5.337491 GCTCAAATCAAGAGAGAAGAGGAGT 60.337 44.000 0.00 0.00 35.09 3.85
3358 5747 4.202461 ACTTGTACCCTCAAGCTCAAATCA 60.202 41.667 6.38 0.00 45.86 2.57
3360 5749 4.373156 ACTTGTACCCTCAAGCTCAAAT 57.627 40.909 6.38 0.00 45.86 2.32
3365 5754 3.007398 CAGAGAACTTGTACCCTCAAGCT 59.993 47.826 6.38 0.00 45.86 3.74
3367 5756 3.007398 AGCAGAGAACTTGTACCCTCAAG 59.993 47.826 5.12 5.12 46.89 3.02
3375 5764 2.251818 AGCAGGAGCAGAGAACTTGTA 58.748 47.619 0.00 0.00 45.49 2.41
3385 5774 1.828768 CTCCCCTTAGCAGGAGCAG 59.171 63.158 4.05 0.00 44.19 4.24
3386 5775 4.056805 CTCCCCTTAGCAGGAGCA 57.943 61.111 4.05 0.00 44.19 4.26
3393 5782 0.761802 ATAGCAGTGCTCCCCTTAGC 59.238 55.000 23.64 0.00 40.44 3.09
3394 5783 1.071385 CCATAGCAGTGCTCCCCTTAG 59.929 57.143 23.64 4.75 40.44 2.18
3395 5784 1.131638 CCATAGCAGTGCTCCCCTTA 58.868 55.000 23.64 2.55 40.44 2.69
3396 5785 0.916358 ACCATAGCAGTGCTCCCCTT 60.916 55.000 23.64 0.00 40.44 3.95
3397 5786 1.307343 ACCATAGCAGTGCTCCCCT 60.307 57.895 23.64 0.00 40.44 4.79
3398 5787 1.153086 CACCATAGCAGTGCTCCCC 60.153 63.158 23.64 0.00 40.44 4.81
3399 5788 0.830648 TACACCATAGCAGTGCTCCC 59.169 55.000 23.64 0.00 40.44 4.30
3400 5789 2.874701 CAATACACCATAGCAGTGCTCC 59.125 50.000 23.64 0.00 40.44 4.70
3401 5790 2.874701 CCAATACACCATAGCAGTGCTC 59.125 50.000 23.64 0.00 40.44 4.26
3402 5791 2.239654 ACCAATACACCATAGCAGTGCT 59.760 45.455 23.44 23.44 43.41 4.40
3403 5792 2.355756 CACCAATACACCATAGCAGTGC 59.644 50.000 7.13 7.13 38.87 4.40
3404 5793 2.355756 GCACCAATACACCATAGCAGTG 59.644 50.000 0.00 0.00 41.15 3.66
3405 5794 2.239654 AGCACCAATACACCATAGCAGT 59.760 45.455 0.00 0.00 0.00 4.40
3406 5795 2.874701 GAGCACCAATACACCATAGCAG 59.125 50.000 0.00 0.00 0.00 4.24
3407 5796 2.238395 TGAGCACCAATACACCATAGCA 59.762 45.455 0.00 0.00 0.00 3.49
3408 5797 2.917933 TGAGCACCAATACACCATAGC 58.082 47.619 0.00 0.00 0.00 2.97
3420 5809 1.168407 GCAAGAGCAGTTGAGCACCA 61.168 55.000 2.41 0.00 41.58 4.17
3427 5816 5.363101 TGGATAGAATAGCAAGAGCAGTTG 58.637 41.667 0.00 0.00 45.49 3.16
3436 5825 3.969976 AGAGGCACTGGATAGAATAGCAA 59.030 43.478 0.00 0.00 41.55 3.91
3451 5840 4.702131 ACACTTATTTTGGATCAGAGGCAC 59.298 41.667 0.00 0.00 0.00 5.01
3487 5876 7.911205 AGTGTCGTCGTTTTAATTCAAATTTGA 59.089 29.630 16.91 16.91 34.92 2.69
3488 5877 8.045750 AGTGTCGTCGTTTTAATTCAAATTTG 57.954 30.769 12.15 12.15 0.00 2.32
3489 5878 8.623310 AAGTGTCGTCGTTTTAATTCAAATTT 57.377 26.923 0.00 0.00 0.00 1.82
3490 5879 9.887406 ATAAGTGTCGTCGTTTTAATTCAAATT 57.113 25.926 0.00 0.00 0.00 1.82
3491 5880 9.887406 AATAAGTGTCGTCGTTTTAATTCAAAT 57.113 25.926 0.00 0.00 0.00 2.32
3492 5881 9.719279 AAATAAGTGTCGTCGTTTTAATTCAAA 57.281 25.926 0.00 0.00 0.00 2.69
3493 5882 9.719279 AAAATAAGTGTCGTCGTTTTAATTCAA 57.281 25.926 0.00 0.00 0.00 2.69
3494 5883 9.160576 CAAAATAAGTGTCGTCGTTTTAATTCA 57.839 29.630 0.00 0.00 0.00 2.57
3495 5884 8.624028 CCAAAATAAGTGTCGTCGTTTTAATTC 58.376 33.333 0.00 0.00 0.00 2.17
3496 5885 8.344098 TCCAAAATAAGTGTCGTCGTTTTAATT 58.656 29.630 0.00 0.00 0.00 1.40
3497 5886 7.863666 TCCAAAATAAGTGTCGTCGTTTTAAT 58.136 30.769 0.00 0.00 0.00 1.40
3498 5887 7.244166 TCCAAAATAAGTGTCGTCGTTTTAA 57.756 32.000 0.00 0.00 0.00 1.52
3499 5888 6.841443 TCCAAAATAAGTGTCGTCGTTTTA 57.159 33.333 0.00 0.00 0.00 1.52
3500 5889 5.738118 TCCAAAATAAGTGTCGTCGTTTT 57.262 34.783 0.00 0.00 0.00 2.43
3501 5890 5.467399 TGATCCAAAATAAGTGTCGTCGTTT 59.533 36.000 0.00 0.00 0.00 3.60
3502 5891 4.992319 TGATCCAAAATAAGTGTCGTCGTT 59.008 37.500 0.00 0.00 0.00 3.85
3503 5892 4.562082 TGATCCAAAATAAGTGTCGTCGT 58.438 39.130 0.00 0.00 0.00 4.34
3504 5893 4.862574 TCTGATCCAAAATAAGTGTCGTCG 59.137 41.667 0.00 0.00 0.00 5.12
3505 5894 5.292101 CCTCTGATCCAAAATAAGTGTCGTC 59.708 44.000 0.00 0.00 0.00 4.20
3506 5895 5.178797 CCTCTGATCCAAAATAAGTGTCGT 58.821 41.667 0.00 0.00 0.00 4.34
3507 5896 4.572389 CCCTCTGATCCAAAATAAGTGTCG 59.428 45.833 0.00 0.00 0.00 4.35
3508 5897 5.745227 TCCCTCTGATCCAAAATAAGTGTC 58.255 41.667 0.00 0.00 0.00 3.67
3509 5898 5.251700 ACTCCCTCTGATCCAAAATAAGTGT 59.748 40.000 0.00 0.00 0.00 3.55
3510 5899 5.749462 ACTCCCTCTGATCCAAAATAAGTG 58.251 41.667 0.00 0.00 0.00 3.16
3511 5900 7.348274 TGATACTCCCTCTGATCCAAAATAAGT 59.652 37.037 0.00 0.00 0.00 2.24
3512 5901 7.739825 TGATACTCCCTCTGATCCAAAATAAG 58.260 38.462 0.00 0.00 0.00 1.73
3513 5902 7.690454 TGATACTCCCTCTGATCCAAAATAA 57.310 36.000 0.00 0.00 0.00 1.40
3514 5903 7.690454 TTGATACTCCCTCTGATCCAAAATA 57.310 36.000 0.00 0.00 0.00 1.40
3515 5904 6.581388 TTGATACTCCCTCTGATCCAAAAT 57.419 37.500 0.00 0.00 0.00 1.82
3516 5905 6.581388 ATTGATACTCCCTCTGATCCAAAA 57.419 37.500 0.00 0.00 0.00 2.44
3517 5906 6.581388 AATTGATACTCCCTCTGATCCAAA 57.419 37.500 0.00 0.00 0.00 3.28
3518 5907 7.690454 TTAATTGATACTCCCTCTGATCCAA 57.310 36.000 0.00 0.00 0.00 3.53
3519 5908 7.256799 CCATTAATTGATACTCCCTCTGATCCA 60.257 40.741 0.00 0.00 0.00 3.41
3520 5909 7.108847 CCATTAATTGATACTCCCTCTGATCC 58.891 42.308 0.00 0.00 0.00 3.36
3521 5910 7.684529 ACCATTAATTGATACTCCCTCTGATC 58.315 38.462 0.00 0.00 0.00 2.92
3522 5911 7.639062 ACCATTAATTGATACTCCCTCTGAT 57.361 36.000 0.00 0.00 0.00 2.90
3523 5912 7.451731 AACCATTAATTGATACTCCCTCTGA 57.548 36.000 0.00 0.00 0.00 3.27
3524 5913 9.799106 ATTAACCATTAATTGATACTCCCTCTG 57.201 33.333 0.00 0.00 32.06 3.35
3573 5962 9.396022 CCAGCTTATTCTAAAAGATCAACCTAA 57.604 33.333 0.00 0.00 0.00 2.69
3574 5963 7.993183 CCCAGCTTATTCTAAAAGATCAACCTA 59.007 37.037 0.00 0.00 0.00 3.08
3575 5964 6.830838 CCCAGCTTATTCTAAAAGATCAACCT 59.169 38.462 0.00 0.00 0.00 3.50
3576 5965 6.039829 CCCCAGCTTATTCTAAAAGATCAACC 59.960 42.308 0.00 0.00 0.00 3.77
3577 5966 6.828785 TCCCCAGCTTATTCTAAAAGATCAAC 59.171 38.462 0.00 0.00 0.00 3.18
3578 5967 6.969043 TCCCCAGCTTATTCTAAAAGATCAA 58.031 36.000 0.00 0.00 0.00 2.57
3579 5968 6.386927 TCTCCCCAGCTTATTCTAAAAGATCA 59.613 38.462 0.00 0.00 0.00 2.92
3580 5969 6.831976 TCTCCCCAGCTTATTCTAAAAGATC 58.168 40.000 0.00 0.00 0.00 2.75
3581 5970 6.183361 CCTCTCCCCAGCTTATTCTAAAAGAT 60.183 42.308 0.00 0.00 0.00 2.40
3582 5971 5.131142 CCTCTCCCCAGCTTATTCTAAAAGA 59.869 44.000 0.00 0.00 0.00 2.52
3583 5972 5.372373 CCTCTCCCCAGCTTATTCTAAAAG 58.628 45.833 0.00 0.00 0.00 2.27
3584 5973 4.166144 CCCTCTCCCCAGCTTATTCTAAAA 59.834 45.833 0.00 0.00 0.00 1.52
3585 5974 3.716872 CCCTCTCCCCAGCTTATTCTAAA 59.283 47.826 0.00 0.00 0.00 1.85
3586 5975 3.318313 CCCTCTCCCCAGCTTATTCTAA 58.682 50.000 0.00 0.00 0.00 2.10
3587 5976 2.977808 CCCTCTCCCCAGCTTATTCTA 58.022 52.381 0.00 0.00 0.00 2.10
3588 5977 1.813102 CCCTCTCCCCAGCTTATTCT 58.187 55.000 0.00 0.00 0.00 2.40
3589 5978 0.109532 GCCCTCTCCCCAGCTTATTC 59.890 60.000 0.00 0.00 0.00 1.75
3590 5979 0.624500 TGCCCTCTCCCCAGCTTATT 60.625 55.000 0.00 0.00 0.00 1.40
3591 5980 1.004758 TGCCCTCTCCCCAGCTTAT 59.995 57.895 0.00 0.00 0.00 1.73
3592 5981 1.690633 CTGCCCTCTCCCCAGCTTA 60.691 63.158 0.00 0.00 0.00 3.09
3593 5982 3.013932 CTGCCCTCTCCCCAGCTT 61.014 66.667 0.00 0.00 0.00 3.74
3596 5985 1.059006 ATAAGCTGCCCTCTCCCCAG 61.059 60.000 0.00 0.00 0.00 4.45
3597 5986 0.624500 AATAAGCTGCCCTCTCCCCA 60.625 55.000 0.00 0.00 0.00 4.96
3598 5987 0.553333 AAATAAGCTGCCCTCTCCCC 59.447 55.000 0.00 0.00 0.00 4.81
3599 5988 1.477740 GGAAATAAGCTGCCCTCTCCC 60.478 57.143 0.00 0.00 0.00 4.30
3600 5989 1.212935 TGGAAATAAGCTGCCCTCTCC 59.787 52.381 0.00 0.00 0.00 3.71
3601 5990 2.293170 GTGGAAATAAGCTGCCCTCTC 58.707 52.381 0.00 0.00 0.00 3.20
3602 5991 1.635487 TGTGGAAATAAGCTGCCCTCT 59.365 47.619 0.00 0.00 0.00 3.69
3603 5992 2.019984 CTGTGGAAATAAGCTGCCCTC 58.980 52.381 0.00 0.00 0.00 4.30
3604 5993 1.957113 GCTGTGGAAATAAGCTGCCCT 60.957 52.381 0.00 0.00 34.05 5.19
3605 5994 0.457443 GCTGTGGAAATAAGCTGCCC 59.543 55.000 0.00 0.00 34.05 5.36
3606 5995 1.467920 AGCTGTGGAAATAAGCTGCC 58.532 50.000 0.00 0.00 45.36 4.85
3607 5996 2.032675 GCTAGCTGTGGAAATAAGCTGC 59.967 50.000 7.70 0.00 46.47 5.25
3608 5997 3.539604 AGCTAGCTGTGGAAATAAGCTG 58.460 45.455 18.57 0.00 46.47 4.24
3610 5999 6.128418 GCTTATAGCTAGCTGTGGAAATAAGC 60.128 42.308 31.94 31.94 41.62 3.09
3611 6000 6.370166 GGCTTATAGCTAGCTGTGGAAATAAG 59.630 42.308 27.68 26.19 41.99 1.73
3612 6001 6.231211 GGCTTATAGCTAGCTGTGGAAATAA 58.769 40.000 27.68 18.71 41.99 1.40
3613 6002 5.280011 GGGCTTATAGCTAGCTGTGGAAATA 60.280 44.000 27.68 12.62 41.99 1.40
3614 6003 4.505742 GGGCTTATAGCTAGCTGTGGAAAT 60.506 45.833 27.68 13.67 41.99 2.17
3615 6004 3.181454 GGGCTTATAGCTAGCTGTGGAAA 60.181 47.826 27.68 10.92 41.99 3.13
3616 6005 2.368875 GGGCTTATAGCTAGCTGTGGAA 59.631 50.000 27.68 11.64 41.99 3.53
3617 6006 1.971357 GGGCTTATAGCTAGCTGTGGA 59.029 52.381 27.68 12.59 41.99 4.02
3618 6007 1.974236 AGGGCTTATAGCTAGCTGTGG 59.026 52.381 27.68 17.53 41.99 4.17
3619 6008 4.873746 TTAGGGCTTATAGCTAGCTGTG 57.126 45.455 27.68 10.81 41.99 3.66
3620 6009 5.602978 TCTTTTAGGGCTTATAGCTAGCTGT 59.397 40.000 27.68 23.01 41.99 4.40
3621 6010 6.102897 TCTTTTAGGGCTTATAGCTAGCTG 57.897 41.667 27.68 11.48 41.99 4.24
3622 6011 6.327887 AGTTCTTTTAGGGCTTATAGCTAGCT 59.672 38.462 23.12 23.12 41.99 3.32
3623 6012 6.425417 CAGTTCTTTTAGGGCTTATAGCTAGC 59.575 42.308 6.62 6.62 41.99 3.42
3624 6013 6.931840 CCAGTTCTTTTAGGGCTTATAGCTAG 59.068 42.308 0.00 0.00 41.99 3.42
3625 6014 6.688156 GCCAGTTCTTTTAGGGCTTATAGCTA 60.688 42.308 0.00 0.00 41.99 3.32
3626 6015 5.685728 CCAGTTCTTTTAGGGCTTATAGCT 58.314 41.667 0.00 0.00 41.99 3.32
3627 6016 4.276183 GCCAGTTCTTTTAGGGCTTATAGC 59.724 45.833 0.00 0.00 41.39 2.97
3628 6017 4.822350 GGCCAGTTCTTTTAGGGCTTATAG 59.178 45.833 0.00 0.00 44.04 1.31
3629 6018 4.385977 GGGCCAGTTCTTTTAGGGCTTATA 60.386 45.833 4.39 0.00 45.21 0.98
3630 6019 3.627492 GGGCCAGTTCTTTTAGGGCTTAT 60.627 47.826 4.39 0.00 45.21 1.73
3631 6020 2.291346 GGGCCAGTTCTTTTAGGGCTTA 60.291 50.000 4.39 0.00 45.21 3.09
3632 6021 1.550179 GGGCCAGTTCTTTTAGGGCTT 60.550 52.381 4.39 0.00 45.21 4.35
3633 6022 0.039764 GGGCCAGTTCTTTTAGGGCT 59.960 55.000 4.39 0.00 45.21 5.19
3634 6023 0.039764 AGGGCCAGTTCTTTTAGGGC 59.960 55.000 6.18 0.00 45.15 5.19
3635 6024 3.621558 CTTAGGGCCAGTTCTTTTAGGG 58.378 50.000 6.18 0.00 0.00 3.53
3636 6025 3.017442 GCTTAGGGCCAGTTCTTTTAGG 58.983 50.000 6.18 0.00 34.27 2.69
3637 6026 3.686016 TGCTTAGGGCCAGTTCTTTTAG 58.314 45.455 6.18 0.00 40.92 1.85
3638 6027 3.799432 TGCTTAGGGCCAGTTCTTTTA 57.201 42.857 6.18 0.00 40.92 1.52
3639 6028 2.675658 TGCTTAGGGCCAGTTCTTTT 57.324 45.000 6.18 0.00 40.92 2.27
3640 6029 2.675658 TTGCTTAGGGCCAGTTCTTT 57.324 45.000 6.18 0.00 40.92 2.52
3641 6030 2.450476 CATTGCTTAGGGCCAGTTCTT 58.550 47.619 6.18 0.00 40.92 2.52
3642 6031 1.957113 GCATTGCTTAGGGCCAGTTCT 60.957 52.381 6.18 0.00 40.92 3.01
3643 6032 0.457443 GCATTGCTTAGGGCCAGTTC 59.543 55.000 6.18 0.00 40.92 3.01
3644 6033 0.251742 TGCATTGCTTAGGGCCAGTT 60.252 50.000 6.18 0.00 40.92 3.16
3645 6034 0.251742 TTGCATTGCTTAGGGCCAGT 60.252 50.000 6.18 0.00 40.92 4.00
3646 6035 0.458669 CTTGCATTGCTTAGGGCCAG 59.541 55.000 6.18 0.00 40.92 4.85
3647 6036 0.251742 ACTTGCATTGCTTAGGGCCA 60.252 50.000 6.18 0.00 40.92 5.36
3648 6037 0.897621 AACTTGCATTGCTTAGGGCC 59.102 50.000 10.49 0.00 40.92 5.80
3649 6038 1.545582 TGAACTTGCATTGCTTAGGGC 59.454 47.619 10.49 4.92 42.22 5.19
3650 6039 3.578688 GTTGAACTTGCATTGCTTAGGG 58.421 45.455 10.49 0.00 0.00 3.53
3651 6040 3.578688 GGTTGAACTTGCATTGCTTAGG 58.421 45.455 10.49 0.31 0.00 2.69
3652 6041 3.005684 TGGGTTGAACTTGCATTGCTTAG 59.994 43.478 10.49 9.61 0.00 2.18
3653 6042 2.961741 TGGGTTGAACTTGCATTGCTTA 59.038 40.909 10.49 0.00 0.00 3.09
3654 6043 1.761784 TGGGTTGAACTTGCATTGCTT 59.238 42.857 10.49 0.00 0.00 3.91
3655 6044 1.342174 CTGGGTTGAACTTGCATTGCT 59.658 47.619 10.49 0.00 0.00 3.91
3656 6045 1.787012 CTGGGTTGAACTTGCATTGC 58.213 50.000 0.46 0.46 0.00 3.56
3657 6046 1.342174 AGCTGGGTTGAACTTGCATTG 59.658 47.619 0.00 0.00 0.00 2.82
3658 6047 1.708341 AGCTGGGTTGAACTTGCATT 58.292 45.000 0.00 0.00 0.00 3.56
3659 6048 1.342174 CAAGCTGGGTTGAACTTGCAT 59.658 47.619 6.68 0.00 33.77 3.96
3660 6049 0.746063 CAAGCTGGGTTGAACTTGCA 59.254 50.000 6.68 0.00 33.77 4.08
3661 6050 0.746659 ACAAGCTGGGTTGAACTTGC 59.253 50.000 17.58 0.00 42.55 4.01
3662 6051 4.647424 TTAACAAGCTGGGTTGAACTTG 57.353 40.909 17.58 0.00 43.99 3.16
3663 6052 5.869649 AATTAACAAGCTGGGTTGAACTT 57.130 34.783 17.58 5.97 0.00 2.66
3664 6053 5.869649 AAATTAACAAGCTGGGTTGAACT 57.130 34.783 17.58 5.88 0.00 3.01
3665 6054 5.465390 GGAAAATTAACAAGCTGGGTTGAAC 59.535 40.000 17.58 0.00 0.00 3.18
3703 6092 6.320164 ACTGTTTAATAAGCACAACAAGGTGA 59.680 34.615 0.00 0.00 41.32 4.02
3706 6095 8.349983 AGTTACTGTTTAATAAGCACAACAAGG 58.650 33.333 10.16 0.00 0.00 3.61
3713 6102 9.382244 CAGTTGAAGTTACTGTTTAATAAGCAC 57.618 33.333 0.00 0.00 38.51 4.40
3714 6103 8.073768 GCAGTTGAAGTTACTGTTTAATAAGCA 58.926 33.333 7.46 0.00 43.81 3.91
3730 6119 3.438087 CCATCAGAAATCGCAGTTGAAGT 59.562 43.478 0.00 0.00 0.00 3.01
3731 6120 3.730061 GCCATCAGAAATCGCAGTTGAAG 60.730 47.826 0.00 0.00 0.00 3.02
3732 6121 2.162208 GCCATCAGAAATCGCAGTTGAA 59.838 45.455 0.00 0.00 0.00 2.69
3734 6123 1.741706 AGCCATCAGAAATCGCAGTTG 59.258 47.619 0.00 0.00 0.00 3.16
3735 6124 2.119801 AGCCATCAGAAATCGCAGTT 57.880 45.000 0.00 0.00 0.00 3.16
3736 6125 2.012673 GAAGCCATCAGAAATCGCAGT 58.987 47.619 0.00 0.00 0.00 4.40
3737 6126 2.286872 AGAAGCCATCAGAAATCGCAG 58.713 47.619 0.00 0.00 0.00 5.18
3738 6127 2.408271 AGAAGCCATCAGAAATCGCA 57.592 45.000 0.00 0.00 0.00 5.10
3739 6128 2.941720 AGAAGAAGCCATCAGAAATCGC 59.058 45.455 0.00 0.00 0.00 4.58
3740 6129 4.440880 AGAGAAGAAGCCATCAGAAATCG 58.559 43.478 0.00 0.00 0.00 3.34
3742 6131 4.161189 TCGAGAGAAGAAGCCATCAGAAAT 59.839 41.667 0.00 0.00 37.03 2.17
3749 6562 3.971245 AAACTCGAGAGAAGAAGCCAT 57.029 42.857 21.68 0.00 41.32 4.40
3785 6598 7.172532 TCTCAACACCACAAAACATACAGATAC 59.827 37.037 0.00 0.00 0.00 2.24
3786 6599 7.220740 TCTCAACACCACAAAACATACAGATA 58.779 34.615 0.00 0.00 0.00 1.98
3789 6602 5.527214 TCTCTCAACACCACAAAACATACAG 59.473 40.000 0.00 0.00 0.00 2.74
3790 6603 5.432645 TCTCTCAACACCACAAAACATACA 58.567 37.500 0.00 0.00 0.00 2.29
3791 6604 6.371809 TTCTCTCAACACCACAAAACATAC 57.628 37.500 0.00 0.00 0.00 2.39
3792 6605 7.581213 AATTCTCTCAACACCACAAAACATA 57.419 32.000 0.00 0.00 0.00 2.29
3793 6606 6.469782 AATTCTCTCAACACCACAAAACAT 57.530 33.333 0.00 0.00 0.00 2.71
3794 6607 5.913137 AATTCTCTCAACACCACAAAACA 57.087 34.783 0.00 0.00 0.00 2.83
3795 6608 5.005682 GCAAATTCTCTCAACACCACAAAAC 59.994 40.000 0.00 0.00 0.00 2.43
3796 6609 5.108517 GCAAATTCTCTCAACACCACAAAA 58.891 37.500 0.00 0.00 0.00 2.44
3833 6646 8.881743 CCATTGTCCAAATAATTTATTGTGTGG 58.118 33.333 10.31 10.31 37.55 4.17
3834 6647 9.650539 TCCATTGTCCAAATAATTTATTGTGTG 57.349 29.630 2.48 0.00 0.00 3.82
3840 6653 9.850198 CCCAAATCCATTGTCCAAATAATTTAT 57.150 29.630 0.00 0.00 37.32 1.40
3857 6675 0.039035 CGTTCCCTTCCCCAAATCCA 59.961 55.000 0.00 0.00 0.00 3.41
3876 6694 1.106285 GTCCCTTCATTCCATGCCAC 58.894 55.000 0.00 0.00 0.00 5.01
3879 7060 0.734889 CACGTCCCTTCATTCCATGC 59.265 55.000 0.00 0.00 0.00 4.06
3886 7067 1.338769 GCTTGTACCACGTCCCTTCAT 60.339 52.381 0.00 0.00 0.00 2.57
3887 7068 0.034337 GCTTGTACCACGTCCCTTCA 59.966 55.000 0.00 0.00 0.00 3.02
3894 7075 0.466543 TCCTTGTGCTTGTACCACGT 59.533 50.000 0.00 0.00 36.01 4.49
3902 7086 2.554032 CAAGTACCCTTCCTTGTGCTTG 59.446 50.000 6.18 6.18 44.62 4.01
3939 7123 0.169672 GCACATGCCTGCAACTGTAG 59.830 55.000 3.55 0.00 37.11 2.74
4001 7196 5.916318 TGTTTTGCAATCTGGATTTCAGTT 58.084 33.333 0.00 0.00 43.76 3.16
4006 7201 7.444299 AGTGTTATGTTTTGCAATCTGGATTT 58.556 30.769 0.00 0.00 0.00 2.17
4056 7256 5.426689 TCGGTTCAGAACTACTCCTAGTA 57.573 43.478 13.13 0.00 32.46 1.82
4058 7258 4.984205 GTTCGGTTCAGAACTACTCCTAG 58.016 47.826 13.13 0.00 45.07 3.02
4077 7277 4.394729 TGGGTATGTGAACCTGAAAGTTC 58.605 43.478 0.00 0.00 45.24 3.01
4102 7302 1.077265 CAAGTCTGGCCCCCATGTT 59.923 57.895 0.00 0.00 30.82 2.71
4103 7303 2.765969 CAAGTCTGGCCCCCATGT 59.234 61.111 0.00 0.00 30.82 3.21
4104 7304 2.757099 GCAAGTCTGGCCCCCATG 60.757 66.667 0.00 0.00 30.82 3.66
4119 7321 2.907634 TGTACTCCGAAAAACACAGCA 58.092 42.857 0.00 0.00 0.00 4.41
4122 7324 3.552699 CGTCTTGTACTCCGAAAAACACA 59.447 43.478 0.00 0.00 0.00 3.72
4125 7327 3.383761 TCCGTCTTGTACTCCGAAAAAC 58.616 45.455 0.00 0.00 0.00 2.43
4128 7330 2.624838 ACTTCCGTCTTGTACTCCGAAA 59.375 45.455 0.00 0.00 0.00 3.46
4131 7333 2.719426 AACTTCCGTCTTGTACTCCG 57.281 50.000 0.00 0.00 0.00 4.63
4133 7335 5.397326 ACGAATAACTTCCGTCTTGTACTC 58.603 41.667 0.00 0.00 0.00 2.59
4138 7340 6.129431 CGATCATACGAATAACTTCCGTCTTG 60.129 42.308 0.00 0.00 35.09 3.02
4139 7341 5.913514 CGATCATACGAATAACTTCCGTCTT 59.086 40.000 0.00 0.00 35.09 3.01
4141 7343 5.726489 CGATCATACGAATAACTTCCGTC 57.274 43.478 0.00 0.00 35.09 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.