Multiple sequence alignment - TraesCS7D01G351700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G351700 chr7D 100.000 8026 0 0 1 8026 452697167 452705192 0.000000e+00 14822.0
1 TraesCS7D01G351700 chr7D 80.137 146 22 4 1499 1642 635849813 635849673 1.420000e-17 102.0
2 TraesCS7D01G351700 chr7D 97.674 43 0 1 5789 5830 565648033 565648075 1.120000e-08 73.1
3 TraesCS7D01G351700 chr7D 94.872 39 2 0 5832 5870 58800482 58800520 2.420000e-05 62.1
4 TraesCS7D01G351700 chr7D 97.297 37 0 1 5228 5263 219833941 219833905 2.420000e-05 62.1
5 TraesCS7D01G351700 chr7B 94.818 4168 113 43 526 4642 475654830 475658945 0.000000e+00 6405.0
6 TraesCS7D01G351700 chr7B 95.274 1989 57 17 5262 7232 475659747 475661716 0.000000e+00 3118.0
7 TraesCS7D01G351700 chr7B 97.449 588 14 1 4641 5227 475659016 475659603 0.000000e+00 1002.0
8 TraesCS7D01G351700 chr7B 87.052 363 19 11 163 501 475654477 475654835 1.260000e-102 385.0
9 TraesCS7D01G351700 chr7B 88.785 214 22 2 7799 8012 475662712 475662923 2.220000e-65 261.0
10 TraesCS7D01G351700 chr7B 89.130 46 0 1 5215 5255 544842587 544842632 1.500000e-02 52.8
11 TraesCS7D01G351700 chr7A 91.502 2530 150 27 2738 5216 545061052 545063567 0.000000e+00 3421.0
12 TraesCS7D01G351700 chr7A 86.346 2556 177 89 263 2726 545058472 545060947 0.000000e+00 2628.0
13 TraesCS7D01G351700 chr7A 93.264 1351 60 21 5907 7232 545064141 545065485 0.000000e+00 1962.0
14 TraesCS7D01G351700 chr7A 91.980 399 27 5 5380 5777 545063714 545064108 9.100000e-154 555.0
15 TraesCS7D01G351700 chr7A 83.664 453 52 13 7587 8025 545066304 545066748 2.700000e-109 407.0
16 TraesCS7D01G351700 chr7A 90.769 130 10 2 5262 5389 545063566 545063695 1.070000e-38 172.0
17 TraesCS7D01G351700 chr7A 86.000 100 14 0 1531 1630 729936465 729936564 3.060000e-19 108.0
18 TraesCS7D01G351700 chr7A 91.549 71 5 1 5792 5861 116786217 116786287 6.630000e-16 97.1
19 TraesCS7D01G351700 chr7A 97.436 39 1 0 5832 5870 625535727 625535765 5.200000e-07 67.6
20 TraesCS7D01G351700 chr7A 95.238 42 0 2 5231 5271 7805345 7805305 1.870000e-06 65.8
21 TraesCS7D01G351700 chr6A 86.000 200 28 0 1488 1687 199817218 199817019 1.750000e-51 215.0
22 TraesCS7D01G351700 chr6A 90.164 122 12 0 3211 3332 199814403 199814282 8.340000e-35 159.0
23 TraesCS7D01G351700 chr6A 83.803 142 20 3 1264 1403 199817458 199817318 1.820000e-26 132.0
24 TraesCS7D01G351700 chr6D 89.630 135 13 1 3211 3344 147878356 147878490 3.850000e-38 171.0
25 TraesCS7D01G351700 chr6D 84.397 141 21 1 1264 1403 147875828 147875968 3.910000e-28 137.0
26 TraesCS7D01G351700 chr6B 88.889 135 14 1 3211 3344 260543706 260543840 1.790000e-36 165.0
27 TraesCS7D01G351700 chr6B 83.571 140 22 1 1265 1403 260540597 260540736 6.540000e-26 130.0
28 TraesCS7D01G351700 chr1A 91.667 84 5 2 5789 5870 568391287 568391204 1.830000e-21 115.0
29 TraesCS7D01G351700 chr1A 95.122 41 2 0 5833 5873 7183302 7183262 1.870000e-06 65.8
30 TraesCS7D01G351700 chr1A 86.538 52 5 2 5213 5263 146950370 146950420 1.000000e-03 56.5
31 TraesCS7D01G351700 chr5A 86.747 83 9 2 5789 5869 423051542 423051624 3.080000e-14 91.6
32 TraesCS7D01G351700 chr3D 93.478 46 1 2 5786 5829 81825829 81825874 5.200000e-07 67.6
33 TraesCS7D01G351700 chr3D 91.489 47 3 1 5788 5833 81825982 81825936 6.720000e-06 63.9
34 TraesCS7D01G351700 chr3B 97.222 36 1 0 5228 5263 173110155 173110120 2.420000e-05 62.1
35 TraesCS7D01G351700 chr2B 95.000 40 1 1 5832 5870 699106984 699107023 2.420000e-05 62.1
36 TraesCS7D01G351700 chr2B 100.000 32 0 0 5232 5263 695377748 695377779 8.700000e-05 60.2
37 TraesCS7D01G351700 chr2B 100.000 28 0 0 5228 5255 104064446 104064419 1.500000e-02 52.8
38 TraesCS7D01G351700 chr1D 97.059 34 1 0 5230 5263 412036647 412036680 3.130000e-04 58.4
39 TraesCS7D01G351700 chr1D 96.875 32 1 0 5798 5829 398872223 398872254 4.000000e-03 54.7
40 TraesCS7D01G351700 chrUn 96.970 33 0 1 5228 5259 75729901 75729869 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G351700 chr7D 452697167 452705192 8025 False 14822.000000 14822 100.0000 1 8026 1 chr7D.!!$F2 8025
1 TraesCS7D01G351700 chr7B 475654477 475662923 8446 False 2234.200000 6405 92.6756 163 8012 5 chr7B.!!$F2 7849
2 TraesCS7D01G351700 chr7A 545058472 545066748 8276 False 1524.166667 3421 89.5875 263 8025 6 chr7A.!!$F4 7762

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
40 41 0.112412 AAACATCCCCCGCAGAAACT 59.888 50.000 0.0 0.0 0.0 2.66 F
327 352 0.179156 GCCTGCGATGGACAACAATG 60.179 55.000 0.0 0.0 0.0 2.82 F
1823 1956 0.034283 GAGAGGGAGTACAGGGTCGT 60.034 60.000 0.0 0.0 0.0 4.34 F
2727 2879 0.108520 TTCCGTTGCTCCGATGTACC 60.109 55.000 0.0 0.0 0.0 3.34 F
2729 2881 0.179084 CCGTTGCTCCGATGTACCAT 60.179 55.000 0.0 0.0 0.0 3.55 F
3100 3359 0.874390 GCTCGGCAAATCACAAGTCA 59.126 50.000 0.0 0.0 0.0 3.41 F
3526 3805 1.496857 TGTGGTCCAAACTTCCCATGA 59.503 47.619 0.0 0.0 0.0 3.07 F
5233 5612 1.619654 TACTCCCTCCGTCGTCAAAA 58.380 50.000 0.0 0.0 0.0 2.44 F
6829 7376 0.452784 GTCGCAAATCTGAACCGTGC 60.453 55.000 0.0 0.0 0.0 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1344 1454 0.609957 TCTCGGCGAGGAAGTGGTTA 60.610 55.000 33.93 10.97 0.00 2.85 R
2255 2394 1.168407 GCAGCAAGCACAGGACAAGA 61.168 55.000 0.00 0.00 44.79 3.02 R
3195 3457 1.804748 GGCCTGGTAAGAAAAGTCACG 59.195 52.381 0.00 0.00 0.00 4.35 R
4168 4455 3.552604 AAACAACATGGTACGCATGAC 57.447 42.857 23.07 0.00 34.39 3.06 R
4452 4740 4.084952 CGTTTGATGTCACCTGCAAAAATG 60.085 41.667 0.00 0.00 32.71 2.32 R
4919 5297 4.381079 GCATATTTTGTAACTTCCGGCCAA 60.381 41.667 2.24 0.00 0.00 4.52 R
5235 5614 4.100189 CCCTCCTCCCATAATATAAGAGCG 59.900 50.000 0.00 0.00 0.00 5.03 R
6944 7491 0.687920 TACCATTCGTGCCACTGGAA 59.312 50.000 8.46 0.00 32.92 3.53 R
7641 8803 2.482721 GACACAAAATCAATCCCGTCGT 59.517 45.455 0.00 0.00 0.00 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.675684 AAAGCTGGGTTGAAGAAAGAAAA 57.324 34.783 0.00 0.00 0.00 2.29
23 24 5.675684 AAGCTGGGTTGAAGAAAGAAAAA 57.324 34.783 0.00 0.00 0.00 1.94
24 25 5.011090 AGCTGGGTTGAAGAAAGAAAAAC 57.989 39.130 0.00 0.00 0.00 2.43
25 26 4.466015 AGCTGGGTTGAAGAAAGAAAAACA 59.534 37.500 0.00 0.00 0.00 2.83
26 27 5.129320 AGCTGGGTTGAAGAAAGAAAAACAT 59.871 36.000 0.00 0.00 0.00 2.71
27 28 5.463392 GCTGGGTTGAAGAAAGAAAAACATC 59.537 40.000 0.00 0.00 0.00 3.06
28 29 5.912892 TGGGTTGAAGAAAGAAAAACATCC 58.087 37.500 0.00 0.00 0.00 3.51
29 30 5.163353 TGGGTTGAAGAAAGAAAAACATCCC 60.163 40.000 0.00 0.00 37.61 3.85
30 31 5.297547 GGTTGAAGAAAGAAAAACATCCCC 58.702 41.667 0.00 0.00 0.00 4.81
31 32 5.297547 GTTGAAGAAAGAAAAACATCCCCC 58.702 41.667 0.00 0.00 0.00 5.40
32 33 3.572255 TGAAGAAAGAAAAACATCCCCCG 59.428 43.478 0.00 0.00 0.00 5.73
33 34 1.893137 AGAAAGAAAAACATCCCCCGC 59.107 47.619 0.00 0.00 0.00 6.13
34 35 1.616374 GAAAGAAAAACATCCCCCGCA 59.384 47.619 0.00 0.00 0.00 5.69
35 36 1.256812 AAGAAAAACATCCCCCGCAG 58.743 50.000 0.00 0.00 0.00 5.18
36 37 0.404040 AGAAAAACATCCCCCGCAGA 59.596 50.000 0.00 0.00 0.00 4.26
37 38 1.203001 AGAAAAACATCCCCCGCAGAA 60.203 47.619 0.00 0.00 0.00 3.02
38 39 1.616374 GAAAAACATCCCCCGCAGAAA 59.384 47.619 0.00 0.00 0.00 2.52
39 40 0.966179 AAAACATCCCCCGCAGAAAC 59.034 50.000 0.00 0.00 0.00 2.78
40 41 0.112412 AAACATCCCCCGCAGAAACT 59.888 50.000 0.00 0.00 0.00 2.66
41 42 0.112412 AACATCCCCCGCAGAAACTT 59.888 50.000 0.00 0.00 0.00 2.66
42 43 0.112412 ACATCCCCCGCAGAAACTTT 59.888 50.000 0.00 0.00 0.00 2.66
43 44 0.527565 CATCCCCCGCAGAAACTTTG 59.472 55.000 0.00 0.00 0.00 2.77
44 45 0.404040 ATCCCCCGCAGAAACTTTGA 59.596 50.000 0.00 0.00 0.00 2.69
45 46 0.536460 TCCCCCGCAGAAACTTTGAC 60.536 55.000 0.00 0.00 0.00 3.18
46 47 0.821711 CCCCCGCAGAAACTTTGACA 60.822 55.000 0.00 0.00 0.00 3.58
47 48 1.028905 CCCCGCAGAAACTTTGACAA 58.971 50.000 0.00 0.00 0.00 3.18
48 49 1.613437 CCCCGCAGAAACTTTGACAAT 59.387 47.619 0.00 0.00 0.00 2.71
49 50 2.351738 CCCCGCAGAAACTTTGACAATC 60.352 50.000 0.00 0.00 0.00 2.67
50 51 2.554032 CCCGCAGAAACTTTGACAATCT 59.446 45.455 0.00 0.00 0.00 2.40
51 52 3.004734 CCCGCAGAAACTTTGACAATCTT 59.995 43.478 0.00 0.00 0.00 2.40
52 53 4.499696 CCCGCAGAAACTTTGACAATCTTT 60.500 41.667 0.00 0.00 0.00 2.52
53 54 4.676924 CCGCAGAAACTTTGACAATCTTTC 59.323 41.667 8.88 8.88 0.00 2.62
54 55 5.506317 CCGCAGAAACTTTGACAATCTTTCT 60.506 40.000 11.97 11.97 32.56 2.52
55 56 6.293407 CCGCAGAAACTTTGACAATCTTTCTA 60.293 38.462 15.30 0.00 31.46 2.10
56 57 7.132213 CGCAGAAACTTTGACAATCTTTCTAA 58.868 34.615 15.30 0.00 31.46 2.10
57 58 7.643764 CGCAGAAACTTTGACAATCTTTCTAAA 59.356 33.333 15.30 0.00 31.46 1.85
58 59 9.301153 GCAGAAACTTTGACAATCTTTCTAAAA 57.699 29.630 15.30 0.00 31.46 1.52
63 64 9.921637 AACTTTGACAATCTTTCTAAAAACACA 57.078 25.926 0.00 0.00 0.00 3.72
68 69 8.816144 TGACAATCTTTCTAAAAACACATTTGC 58.184 29.630 0.00 0.00 0.00 3.68
69 70 7.840489 ACAATCTTTCTAAAAACACATTTGCG 58.160 30.769 0.00 0.00 0.00 4.85
70 71 7.704472 ACAATCTTTCTAAAAACACATTTGCGA 59.296 29.630 0.00 0.00 0.00 5.10
71 72 8.538856 CAATCTTTCTAAAAACACATTTGCGAA 58.461 29.630 0.00 0.00 0.00 4.70
72 73 8.816640 ATCTTTCTAAAAACACATTTGCGAAT 57.183 26.923 0.00 0.00 0.00 3.34
73 74 9.906660 ATCTTTCTAAAAACACATTTGCGAATA 57.093 25.926 0.00 0.00 0.00 1.75
74 75 9.906660 TCTTTCTAAAAACACATTTGCGAATAT 57.093 25.926 0.00 0.00 0.00 1.28
76 77 7.946918 TCTAAAAACACATTTGCGAATATCG 57.053 32.000 0.00 0.00 43.89 2.92
89 90 4.794248 CGAATATCGCACAGGAATTTCA 57.206 40.909 0.00 0.00 31.14 2.69
90 91 5.348418 CGAATATCGCACAGGAATTTCAT 57.652 39.130 0.00 0.00 31.14 2.57
91 92 5.751680 CGAATATCGCACAGGAATTTCATT 58.248 37.500 0.00 0.00 31.14 2.57
92 93 5.848036 CGAATATCGCACAGGAATTTCATTC 59.152 40.000 0.00 0.00 34.02 2.67
93 94 6.511605 CGAATATCGCACAGGAATTTCATTCA 60.512 38.462 0.00 0.00 35.45 2.57
94 95 6.889301 ATATCGCACAGGAATTTCATTCAT 57.111 33.333 0.00 0.00 41.03 2.57
106 107 9.699410 AGGAATTTCATTCATGAAGTGGTATAA 57.301 29.630 14.54 2.06 46.34 0.98
107 108 9.736023 GGAATTTCATTCATGAAGTGGTATAAC 57.264 33.333 14.54 1.16 46.34 1.89
112 113 9.513906 TTCATTCATGAAGTGGTATAACTTTGA 57.486 29.630 14.54 5.00 41.51 2.69
113 114 8.946085 TCATTCATGAAGTGGTATAACTTTGAC 58.054 33.333 14.54 0.00 40.48 3.18
114 115 8.729756 CATTCATGAAGTGGTATAACTTTGACA 58.270 33.333 14.54 0.00 40.48 3.58
115 116 8.684386 TTCATGAAGTGGTATAACTTTGACAA 57.316 30.769 3.38 0.00 40.48 3.18
116 117 8.862325 TCATGAAGTGGTATAACTTTGACAAT 57.138 30.769 0.00 0.00 40.48 2.71
117 118 8.946085 TCATGAAGTGGTATAACTTTGACAATC 58.054 33.333 0.00 0.00 40.48 2.67
118 119 8.729756 CATGAAGTGGTATAACTTTGACAATCA 58.270 33.333 0.00 0.00 40.48 2.57
119 120 8.862325 TGAAGTGGTATAACTTTGACAATCAT 57.138 30.769 0.00 0.00 40.48 2.45
120 121 9.295825 TGAAGTGGTATAACTTTGACAATCATT 57.704 29.630 0.00 0.00 40.48 2.57
121 122 9.559958 GAAGTGGTATAACTTTGACAATCATTG 57.440 33.333 0.00 0.00 40.48 2.82
122 123 9.077885 AAGTGGTATAACTTTGACAATCATTGT 57.922 29.630 1.52 1.52 41.17 2.71
123 124 9.733556 AGTGGTATAACTTTGACAATCATTGTA 57.266 29.630 2.04 0.00 45.52 2.41
152 153 2.777536 TCCAGGAGGAGCACAATGT 58.222 52.632 0.00 0.00 39.61 2.71
153 154 1.067295 TCCAGGAGGAGCACAATGTT 58.933 50.000 0.00 0.00 39.61 2.71
154 155 2.265367 TCCAGGAGGAGCACAATGTTA 58.735 47.619 0.00 0.00 39.61 2.41
155 156 2.237143 TCCAGGAGGAGCACAATGTTAG 59.763 50.000 0.00 0.00 39.61 2.34
156 157 2.237143 CCAGGAGGAGCACAATGTTAGA 59.763 50.000 0.00 0.00 36.89 2.10
157 158 3.118112 CCAGGAGGAGCACAATGTTAGAT 60.118 47.826 0.00 0.00 36.89 1.98
158 159 4.521146 CAGGAGGAGCACAATGTTAGATT 58.479 43.478 0.00 0.00 0.00 2.40
159 160 4.574013 CAGGAGGAGCACAATGTTAGATTC 59.426 45.833 0.00 0.00 0.00 2.52
160 161 3.879892 GGAGGAGCACAATGTTAGATTCC 59.120 47.826 0.00 0.00 0.00 3.01
161 162 4.517285 GAGGAGCACAATGTTAGATTCCA 58.483 43.478 0.00 0.00 0.00 3.53
199 200 1.521457 ACCACGGCATCATGTAGCG 60.521 57.895 0.00 0.00 0.00 4.26
205 206 2.628106 CATCATGTAGCGCACGCC 59.372 61.111 11.47 0.00 43.17 5.68
212 213 1.359117 GTAGCGCACGCCATCTAGA 59.641 57.895 11.47 0.00 43.17 2.43
213 214 0.248907 GTAGCGCACGCCATCTAGAA 60.249 55.000 11.47 0.00 43.17 2.10
214 215 0.458260 TAGCGCACGCCATCTAGAAA 59.542 50.000 11.47 0.00 43.17 2.52
215 216 0.391130 AGCGCACGCCATCTAGAAAA 60.391 50.000 11.47 0.00 43.17 2.29
253 254 5.428496 CACACATGCTCTCTTTTTGAAGA 57.572 39.130 0.00 0.00 0.00 2.87
254 255 5.450171 CACACATGCTCTCTTTTTGAAGAG 58.550 41.667 9.35 9.35 45.85 2.85
272 289 3.367321 AGAGACAAACTAGTAGCCCCTC 58.633 50.000 0.00 0.20 0.00 4.30
327 352 0.179156 GCCTGCGATGGACAACAATG 60.179 55.000 0.00 0.00 0.00 2.82
328 353 0.452987 CCTGCGATGGACAACAATGG 59.547 55.000 0.00 0.00 0.00 3.16
407 435 0.393808 AAATTCCCATCACCCGACCG 60.394 55.000 0.00 0.00 0.00 4.79
408 436 1.268992 AATTCCCATCACCCGACCGA 61.269 55.000 0.00 0.00 0.00 4.69
501 543 3.858503 GCCCATACCGATACTACCGTTTC 60.859 52.174 0.00 0.00 0.00 2.78
502 544 3.305608 CCCATACCGATACTACCGTTTCC 60.306 52.174 0.00 0.00 0.00 3.13
504 554 4.038402 CCATACCGATACTACCGTTTCCTT 59.962 45.833 0.00 0.00 0.00 3.36
510 560 5.173664 CGATACTACCGTTTCCTTTCCTTT 58.826 41.667 0.00 0.00 0.00 3.11
511 561 5.640783 CGATACTACCGTTTCCTTTCCTTTT 59.359 40.000 0.00 0.00 0.00 2.27
521 571 2.441035 CTTTCCTTTTCCCCCGCCCT 62.441 60.000 0.00 0.00 0.00 5.19
579 629 1.136828 TGGTAAATCCCATCCCGGAG 58.863 55.000 0.73 0.00 36.56 4.63
600 650 2.376855 GGGAGGGAGGGAGGATTAATTG 59.623 54.545 0.00 0.00 0.00 2.32
601 651 2.376855 GGAGGGAGGGAGGATTAATTGG 59.623 54.545 0.00 0.00 0.00 3.16
602 652 3.327439 GAGGGAGGGAGGATTAATTGGA 58.673 50.000 0.00 0.00 0.00 3.53
688 746 3.430862 GCGATTGCGGCCACAAGA 61.431 61.111 12.50 0.00 38.16 3.02
689 747 2.787249 CGATTGCGGCCACAAGAG 59.213 61.111 12.50 4.58 31.96 2.85
690 748 2.753966 CGATTGCGGCCACAAGAGG 61.754 63.158 12.50 0.00 31.96 3.69
691 749 1.377202 GATTGCGGCCACAAGAGGA 60.377 57.895 12.50 0.00 31.96 3.71
692 750 1.372087 GATTGCGGCCACAAGAGGAG 61.372 60.000 12.50 0.00 31.96 3.69
792 854 4.202409 CCATTAACCCATCCTCTCTCTTCC 60.202 50.000 0.00 0.00 0.00 3.46
808 873 1.279846 CTTCCTTTACCTTACCCCGCA 59.720 52.381 0.00 0.00 0.00 5.69
809 874 0.906775 TCCTTTACCTTACCCCGCAG 59.093 55.000 0.00 0.00 0.00 5.18
816 881 4.708386 TTACCCCGCAGCCCGTTG 62.708 66.667 0.00 0.00 34.38 4.10
864 931 3.304996 GGTTCTCCTTCTTGCTTTGCTTC 60.305 47.826 0.00 0.00 0.00 3.86
868 941 1.000938 CCTTCTTGCTTTGCTTCGCTT 60.001 47.619 0.00 0.00 0.00 4.68
1429 1545 2.202987 CCCGCCTCATGAGCACTC 60.203 66.667 17.76 5.01 0.00 3.51
1431 1547 1.395045 CCCGCCTCATGAGCACTCTA 61.395 60.000 17.76 0.00 0.00 2.43
1432 1548 0.678395 CCGCCTCATGAGCACTCTAT 59.322 55.000 17.76 0.00 0.00 1.98
1433 1549 1.336702 CCGCCTCATGAGCACTCTATC 60.337 57.143 17.76 0.00 0.00 2.08
1434 1550 1.612950 CGCCTCATGAGCACTCTATCT 59.387 52.381 17.76 0.00 0.00 1.98
1438 1554 5.007034 GCCTCATGAGCACTCTATCTACTA 58.993 45.833 17.76 0.00 0.00 1.82
1461 1577 1.532921 GGAAGAGCACAGTCGATCGAG 60.533 57.143 20.09 10.62 0.00 4.04
1796 1929 4.072088 GCCGACGACGTTGCCTTG 62.072 66.667 9.87 0.00 37.88 3.61
1797 1930 4.072088 CCGACGACGTTGCCTTGC 62.072 66.667 9.87 0.00 37.88 4.01
1823 1956 0.034283 GAGAGGGAGTACAGGGTCGT 60.034 60.000 0.00 0.00 0.00 4.34
1983 2116 1.268539 CGGCGCCTGGATTCAAATTAC 60.269 52.381 26.68 0.00 0.00 1.89
2255 2394 1.489230 TCATGCATGTGATCTCCTGCT 59.511 47.619 25.43 8.22 35.66 4.24
2287 2426 0.244450 TTGCTGCTTGCTTACATGGC 59.756 50.000 0.00 0.00 43.37 4.40
2367 2506 0.537188 ACTTCGTGGCCCAGATACTG 59.463 55.000 0.00 0.00 0.00 2.74
2397 2536 1.474077 GTCATGTCAAGGCCATTGTCC 59.526 52.381 5.01 3.43 40.05 4.02
2542 2694 1.686355 TGTCCTTTTGATTGTGCCGT 58.314 45.000 0.00 0.00 0.00 5.68
2557 2709 1.495951 CCGTGTTGCCTAACGAAGC 59.504 57.895 3.98 0.00 42.32 3.86
2567 2719 2.732282 GCCTAACGAAGCAATTTGCCTC 60.732 50.000 17.51 13.29 46.52 4.70
2727 2879 0.108520 TTCCGTTGCTCCGATGTACC 60.109 55.000 0.00 0.00 0.00 3.34
2729 2881 0.179084 CCGTTGCTCCGATGTACCAT 60.179 55.000 0.00 0.00 0.00 3.55
2733 2885 2.802816 GTTGCTCCGATGTACCATCATC 59.197 50.000 5.19 0.00 40.29 2.92
2734 2886 2.038659 TGCTCCGATGTACCATCATCA 58.961 47.619 5.19 0.00 42.82 3.07
2736 2888 3.257393 GCTCCGATGTACCATCATCATC 58.743 50.000 5.19 0.00 42.82 2.92
2740 2892 2.998670 CGATGTACCATCATCATCTGGC 59.001 50.000 5.19 0.00 42.82 4.85
2741 2893 3.555586 CGATGTACCATCATCATCTGGCA 60.556 47.826 5.19 0.00 42.82 4.92
2744 2896 3.200605 TGTACCATCATCATCTGGCAAGT 59.799 43.478 0.00 0.00 35.88 3.16
2745 2897 3.377253 ACCATCATCATCTGGCAAGTT 57.623 42.857 0.00 0.00 35.88 2.66
2791 3048 3.372206 CACAAAGGCCTCTTGATTCGTAG 59.628 47.826 25.14 2.26 32.75 3.51
2820 3079 4.014406 CCTACCCTAAAATTCAAACCGCT 58.986 43.478 0.00 0.00 0.00 5.52
2821 3080 3.934457 ACCCTAAAATTCAAACCGCTG 57.066 42.857 0.00 0.00 0.00 5.18
2845 3104 8.442632 TGACTTCAATACATTGATTGGATCTC 57.557 34.615 5.52 0.00 45.30 2.75
2854 3113 7.798596 ACATTGATTGGATCTCATCAGTAAC 57.201 36.000 7.24 0.00 0.00 2.50
2860 3119 6.968263 TTGGATCTCATCAGTAACTAGAGG 57.032 41.667 0.00 0.00 0.00 3.69
2875 3134 6.426646 AACTAGAGGGAGCCTAAATGTATG 57.573 41.667 0.00 0.00 31.76 2.39
2882 3141 5.606749 AGGGAGCCTAAATGTATGTACATGA 59.393 40.000 18.81 5.27 38.38 3.07
2913 3172 2.068519 GCTAAAAATGTGCCCAACTGC 58.931 47.619 0.00 0.00 0.00 4.40
2998 3257 8.805688 GTCGTAGAGTATTTCAAGGAAATGTAC 58.194 37.037 13.03 5.72 38.99 2.90
3031 3290 4.025040 TCAGCAATCACATCTTCCTTGT 57.975 40.909 0.00 0.00 0.00 3.16
3100 3359 0.874390 GCTCGGCAAATCACAAGTCA 59.126 50.000 0.00 0.00 0.00 3.41
3107 3366 4.672542 CGGCAAATCACAAGTCATGTTAGG 60.673 45.833 0.00 0.00 41.46 2.69
3136 3397 9.276397 GCCAATTTGTATATTGCAATGTTTTTC 57.724 29.630 22.27 7.58 34.81 2.29
3257 3519 6.876257 GTCAGAGATACACAAAGAGGTTGAAT 59.124 38.462 0.00 0.00 39.87 2.57
3526 3805 1.496857 TGTGGTCCAAACTTCCCATGA 59.503 47.619 0.00 0.00 0.00 3.07
3632 3919 9.603921 ATTTGTTTTCAGACAGTTCATCAAAAT 57.396 25.926 0.00 0.00 0.00 1.82
3695 3982 7.615403 TCAACATAAGTGAGAAGCTAACATCT 58.385 34.615 0.00 0.00 0.00 2.90
4149 4436 8.579006 TCATTTCTGATAATTTTTGACACAGCT 58.421 29.630 0.00 0.00 0.00 4.24
4168 4455 3.760684 AGCTGAGAGGCCTTTGTAAATTG 59.239 43.478 6.77 0.00 0.00 2.32
4588 4876 9.221933 TCTCGCTTAAAATCAATGTTAAGGTAA 57.778 29.630 12.46 0.00 37.65 2.85
4919 5297 2.787994 CAGGTTGTGGCTTCTCAAGAT 58.212 47.619 0.00 0.00 0.00 2.40
5203 5581 4.569761 TTCTATCGGTAAGCTAGTGCAG 57.430 45.455 0.00 0.00 42.74 4.41
5227 5606 3.631227 AGTAAAAGATACTCCCTCCGTCG 59.369 47.826 0.00 0.00 0.00 5.12
5228 5607 2.140839 AAAGATACTCCCTCCGTCGT 57.859 50.000 0.00 0.00 0.00 4.34
5229 5608 1.677942 AAGATACTCCCTCCGTCGTC 58.322 55.000 0.00 0.00 0.00 4.20
5233 5612 1.619654 TACTCCCTCCGTCGTCAAAA 58.380 50.000 0.00 0.00 0.00 2.44
5235 5614 1.145803 CTCCCTCCGTCGTCAAAAAC 58.854 55.000 0.00 0.00 0.00 2.43
5251 5630 7.069569 CGTCAAAAACGCTCTTATATTATGGG 58.930 38.462 0.00 0.00 45.76 4.00
5252 5631 7.042321 CGTCAAAAACGCTCTTATATTATGGGA 60.042 37.037 0.00 0.00 45.76 4.37
5253 5632 8.283291 GTCAAAAACGCTCTTATATTATGGGAG 58.717 37.037 0.00 0.00 0.00 4.30
5254 5633 7.444183 TCAAAAACGCTCTTATATTATGGGAGG 59.556 37.037 8.67 4.03 0.00 4.30
5256 5635 5.923733 ACGCTCTTATATTATGGGAGGAG 57.076 43.478 8.67 0.00 0.00 3.69
5259 5638 5.281314 GCTCTTATATTATGGGAGGAGGGA 58.719 45.833 8.67 0.00 0.00 4.20
5260 5639 5.365314 GCTCTTATATTATGGGAGGAGGGAG 59.635 48.000 8.67 0.00 0.00 4.30
5493 6011 8.062448 GGATGCACTTCGTATTTTCTTATGTAC 58.938 37.037 0.00 0.00 0.00 2.90
5496 6014 8.387354 TGCACTTCGTATTTTCTTATGTACATG 58.613 33.333 18.81 2.62 0.00 3.21
5728 6246 6.717289 TGTTTTAAGCTATGGGATGTACTGT 58.283 36.000 0.00 0.00 0.00 3.55
5735 6254 5.535406 AGCTATGGGATGTACTGTACACTAC 59.465 44.000 21.84 15.37 42.23 2.73
5812 6331 5.574188 ACCCCTCTGATCCATATTAATTGC 58.426 41.667 0.00 0.00 0.00 3.56
5814 6333 4.637534 CCCTCTGATCCATATTAATTGCCG 59.362 45.833 0.00 0.00 0.00 5.69
5826 6345 7.962918 CCATATTAATTGCCGCTGATTTAGTAC 59.037 37.037 0.00 0.00 0.00 2.73
5828 6347 6.745159 TTAATTGCCGCTGATTTAGTACAA 57.255 33.333 0.00 0.00 0.00 2.41
5829 6348 5.835113 AATTGCCGCTGATTTAGTACAAT 57.165 34.783 0.00 0.00 31.29 2.71
5832 6351 3.373748 TGCCGCTGATTTAGTACAATGTG 59.626 43.478 0.00 0.00 0.00 3.21
5834 6353 4.569162 GCCGCTGATTTAGTACAATGTGTA 59.431 41.667 0.00 0.00 0.00 2.90
5856 6375 9.845305 GTGTACTAAATCAGCGACAATTAATAC 57.155 33.333 0.00 0.00 0.00 1.89
5861 6380 6.861065 AATCAGCGACAATTAATACGGATT 57.139 33.333 0.00 0.00 0.00 3.01
5873 6392 2.544844 TACGGATTGGAGGGAGAACT 57.455 50.000 0.00 0.00 0.00 3.01
5875 6394 2.108970 ACGGATTGGAGGGAGAACTAC 58.891 52.381 0.00 0.00 0.00 2.73
5876 6395 2.292323 ACGGATTGGAGGGAGAACTACT 60.292 50.000 0.00 0.00 0.00 2.57
6178 6712 2.543777 TTGTACTGGTCCTTGCTGAC 57.456 50.000 0.00 0.00 34.42 3.51
6187 6721 1.597854 CCTTGCTGACGGCTGACAA 60.598 57.895 7.96 2.15 42.39 3.18
6189 6723 0.877071 CTTGCTGACGGCTGACAAAT 59.123 50.000 7.96 0.00 42.39 2.32
6252 6786 7.244192 GTCAAGCATTTGAATAGACTTGGTAC 58.756 38.462 0.00 0.00 44.49 3.34
6279 6813 2.330440 TCAACAAAGCTCTCACTGCA 57.670 45.000 0.00 0.00 0.00 4.41
6285 6819 1.638529 AAGCTCTCACTGCACCTAGT 58.361 50.000 0.00 0.00 0.00 2.57
6312 6849 4.213564 AGCAGAGGAGACATGGTAAAAG 57.786 45.455 0.00 0.00 0.00 2.27
6710 7253 0.974836 GATTTTGCAGTTACGCACGC 59.025 50.000 1.85 0.00 42.87 5.34
6829 7376 0.452784 GTCGCAAATCTGAACCGTGC 60.453 55.000 0.00 0.00 0.00 5.34
6944 7491 1.001597 GAGAACCACACGTCGAAGAGT 60.002 52.381 5.05 0.00 36.95 3.24
7171 7720 4.158764 CCTGAACAATCTCTCGACTACCTT 59.841 45.833 0.00 0.00 0.00 3.50
7232 7785 2.237143 GGTCAGATGTCATCCAGTTCCA 59.763 50.000 9.29 0.00 0.00 3.53
7234 7787 3.055530 GTCAGATGTCATCCAGTTCCAGT 60.056 47.826 9.29 0.00 0.00 4.00
7235 7788 3.196469 TCAGATGTCATCCAGTTCCAGTC 59.804 47.826 9.29 0.00 0.00 3.51
7236 7789 3.197333 CAGATGTCATCCAGTTCCAGTCT 59.803 47.826 9.29 0.00 0.00 3.24
7237 7790 3.197333 AGATGTCATCCAGTTCCAGTCTG 59.803 47.826 9.29 0.00 0.00 3.51
7238 7791 2.608623 TGTCATCCAGTTCCAGTCTGA 58.391 47.619 0.00 0.00 35.20 3.27
7239 7792 2.972021 TGTCATCCAGTTCCAGTCTGAA 59.028 45.455 0.00 0.00 35.20 3.02
7241 7794 3.999663 GTCATCCAGTTCCAGTCTGAAAG 59.000 47.826 0.00 0.00 35.20 2.62
7242 7795 3.903714 TCATCCAGTTCCAGTCTGAAAGA 59.096 43.478 0.00 0.00 43.69 2.52
7258 7811 6.644347 TCTGAAAGAAGTTAGGCTAAGATGG 58.356 40.000 7.33 0.00 42.31 3.51
7259 7812 6.213600 TCTGAAAGAAGTTAGGCTAAGATGGT 59.786 38.462 7.33 0.00 42.31 3.55
7260 7813 7.399191 TCTGAAAGAAGTTAGGCTAAGATGGTA 59.601 37.037 7.33 0.00 42.31 3.25
7261 7814 8.090788 TGAAAGAAGTTAGGCTAAGATGGTAT 57.909 34.615 7.33 0.00 0.00 2.73
7262 7815 8.548877 TGAAAGAAGTTAGGCTAAGATGGTATT 58.451 33.333 7.33 0.00 0.00 1.89
7263 7816 8.966069 AAAGAAGTTAGGCTAAGATGGTATTC 57.034 34.615 7.33 4.29 0.00 1.75
7264 7817 7.676683 AGAAGTTAGGCTAAGATGGTATTCA 57.323 36.000 7.33 0.00 0.00 2.57
7265 7818 8.090788 AGAAGTTAGGCTAAGATGGTATTCAA 57.909 34.615 7.33 0.00 0.00 2.69
7266 7819 8.207545 AGAAGTTAGGCTAAGATGGTATTCAAG 58.792 37.037 7.33 0.00 0.00 3.02
7267 7820 7.439108 AGTTAGGCTAAGATGGTATTCAAGT 57.561 36.000 7.33 0.00 0.00 3.16
7268 7821 7.501844 AGTTAGGCTAAGATGGTATTCAAGTC 58.498 38.462 7.33 0.00 0.00 3.01
7269 7822 7.345914 AGTTAGGCTAAGATGGTATTCAAGTCT 59.654 37.037 7.33 0.00 0.00 3.24
7270 7823 6.168270 AGGCTAAGATGGTATTCAAGTCTC 57.832 41.667 0.00 0.00 0.00 3.36
7271 7824 5.663106 AGGCTAAGATGGTATTCAAGTCTCA 59.337 40.000 0.00 0.00 0.00 3.27
7272 7825 6.328672 AGGCTAAGATGGTATTCAAGTCTCAT 59.671 38.462 0.00 0.00 0.00 2.90
7273 7826 6.995091 GGCTAAGATGGTATTCAAGTCTCATT 59.005 38.462 0.00 0.00 0.00 2.57
7274 7827 7.500559 GGCTAAGATGGTATTCAAGTCTCATTT 59.499 37.037 0.00 0.00 0.00 2.32
7275 7828 8.555361 GCTAAGATGGTATTCAAGTCTCATTTC 58.445 37.037 0.00 0.00 0.00 2.17
7276 7829 7.545362 AAGATGGTATTCAAGTCTCATTTCG 57.455 36.000 0.00 0.00 0.00 3.46
7277 7830 6.878317 AGATGGTATTCAAGTCTCATTTCGA 58.122 36.000 0.00 0.00 0.00 3.71
7278 7831 7.504403 AGATGGTATTCAAGTCTCATTTCGAT 58.496 34.615 0.00 0.00 0.00 3.59
7279 7832 7.655328 AGATGGTATTCAAGTCTCATTTCGATC 59.345 37.037 0.00 0.00 0.00 3.69
7280 7833 6.878317 TGGTATTCAAGTCTCATTTCGATCT 58.122 36.000 0.00 0.00 0.00 2.75
7281 7834 7.331026 TGGTATTCAAGTCTCATTTCGATCTT 58.669 34.615 0.00 0.00 0.00 2.40
7282 7835 7.492669 TGGTATTCAAGTCTCATTTCGATCTTC 59.507 37.037 0.00 0.00 0.00 2.87
7283 7836 7.492669 GGTATTCAAGTCTCATTTCGATCTTCA 59.507 37.037 0.00 0.00 0.00 3.02
7284 7837 7.912056 ATTCAAGTCTCATTTCGATCTTCAA 57.088 32.000 0.00 0.00 0.00 2.69
7285 7838 6.957984 TCAAGTCTCATTTCGATCTTCAAG 57.042 37.500 0.00 0.00 0.00 3.02
7286 7839 5.871524 TCAAGTCTCATTTCGATCTTCAAGG 59.128 40.000 0.00 0.00 0.00 3.61
7287 7840 5.667539 AGTCTCATTTCGATCTTCAAGGA 57.332 39.130 0.00 0.00 0.00 3.36
7288 7841 6.232581 AGTCTCATTTCGATCTTCAAGGAT 57.767 37.500 0.00 0.00 0.00 3.24
7289 7842 6.047870 AGTCTCATTTCGATCTTCAAGGATG 58.952 40.000 0.00 0.00 0.00 3.51
7290 7843 5.236047 GTCTCATTTCGATCTTCAAGGATGG 59.764 44.000 0.00 0.00 0.00 3.51
7291 7844 5.102953 TCATTTCGATCTTCAAGGATGGT 57.897 39.130 0.00 0.00 0.00 3.55
7292 7845 5.500234 TCATTTCGATCTTCAAGGATGGTT 58.500 37.500 0.00 0.00 0.00 3.67
7293 7846 5.586243 TCATTTCGATCTTCAAGGATGGTTC 59.414 40.000 0.00 0.00 0.00 3.62
7294 7847 4.551702 TTCGATCTTCAAGGATGGTTCA 57.448 40.909 0.00 0.00 0.00 3.18
7295 7848 4.760530 TCGATCTTCAAGGATGGTTCAT 57.239 40.909 0.00 0.00 0.00 2.57
7300 7853 5.246981 TCTTCAAGGATGGTTCATTCACT 57.753 39.130 0.00 0.00 0.00 3.41
7325 7878 4.730035 GCATAACTGACTTGCATGCTTCTC 60.730 45.833 20.33 10.34 39.09 2.87
7327 7880 3.069079 ACTGACTTGCATGCTTCTCAT 57.931 42.857 20.33 0.00 35.31 2.90
7329 7882 2.004733 TGACTTGCATGCTTCTCATCG 58.995 47.619 20.33 0.88 31.79 3.84
7340 7893 2.897436 CTTCTCATCGGTGCATCTGAA 58.103 47.619 0.00 0.00 34.86 3.02
7375 7928 4.478206 TGCTTTCCCATGACAACAAAAA 57.522 36.364 0.00 0.00 0.00 1.94
7377 7930 4.815308 TGCTTTCCCATGACAACAAAAATG 59.185 37.500 0.00 0.00 0.00 2.32
7438 8548 7.437713 TGGAGTGGAACAAGAACATATCTAT 57.562 36.000 0.00 0.00 44.16 1.98
7439 8549 7.500992 TGGAGTGGAACAAGAACATATCTATC 58.499 38.462 0.00 0.00 44.16 2.08
7440 8550 7.345653 TGGAGTGGAACAAGAACATATCTATCT 59.654 37.037 0.00 0.00 44.16 1.98
7441 8551 8.861086 GGAGTGGAACAAGAACATATCTATCTA 58.139 37.037 0.00 0.00 44.16 1.98
7464 8574 8.089597 TCTATCGATACTAGACTAAGGTGACAG 58.910 40.741 0.00 0.00 0.00 3.51
7470 8580 5.628130 ACTAGACTAAGGTGACAGTGTACA 58.372 41.667 0.00 0.00 0.00 2.90
7471 8581 4.850347 AGACTAAGGTGACAGTGTACAC 57.150 45.455 18.56 18.56 36.44 2.90
7494 8604 1.555538 CGTCGAAATAGCAGCGCTC 59.444 57.895 7.13 2.24 40.44 5.03
7495 8605 1.139816 CGTCGAAATAGCAGCGCTCA 61.140 55.000 7.13 0.00 40.44 4.26
7505 8615 1.157585 GCAGCGCTCATGATCATGAT 58.842 50.000 32.96 18.99 45.74 2.45
7506 8616 1.535896 GCAGCGCTCATGATCATGATT 59.464 47.619 32.96 18.62 45.74 2.57
7507 8617 2.031069 GCAGCGCTCATGATCATGATTT 60.031 45.455 32.96 18.32 45.74 2.17
7508 8618 3.550233 GCAGCGCTCATGATCATGATTTT 60.550 43.478 32.96 18.62 45.74 1.82
7509 8619 4.607955 CAGCGCTCATGATCATGATTTTT 58.392 39.130 32.96 18.92 45.74 1.94
7535 8663 6.852420 TCTAGGGTATGTATGATAAGGTGC 57.148 41.667 0.00 0.00 0.00 5.01
7536 8664 6.562228 TCTAGGGTATGTATGATAAGGTGCT 58.438 40.000 0.00 0.00 0.00 4.40
7546 8674 8.662781 TGTATGATAAGGTGCTCTGAAAATAC 57.337 34.615 0.00 0.00 0.00 1.89
7547 8675 7.715249 TGTATGATAAGGTGCTCTGAAAATACC 59.285 37.037 0.00 0.00 0.00 2.73
7549 8677 6.480763 TGATAAGGTGCTCTGAAAATACCAA 58.519 36.000 0.00 0.00 33.88 3.67
7556 8684 6.096001 GGTGCTCTGAAAATACCAATCTGAAT 59.904 38.462 0.00 0.00 0.00 2.57
7566 8694 7.426929 AATACCAATCTGAATAATGAGACGC 57.573 36.000 0.00 0.00 0.00 5.19
7568 8696 4.572389 ACCAATCTGAATAATGAGACGCAC 59.428 41.667 0.00 0.00 0.00 5.34
7571 8705 6.238566 CCAATCTGAATAATGAGACGCACAAT 60.239 38.462 0.00 0.00 0.00 2.71
7576 8710 7.383300 TCTGAATAATGAGACGCACAATGATAG 59.617 37.037 0.00 0.00 0.00 2.08
7629 8791 7.725844 ACTCCAAGTTTCCTTTTCATAGATGTT 59.274 33.333 0.00 0.00 0.00 2.71
7631 8793 9.753674 TCCAAGTTTCCTTTTCATAGATGTTAT 57.246 29.630 0.00 0.00 0.00 1.89
7649 8811 7.609146 AGATGTTATACTAATGATACGACGGGA 59.391 37.037 0.00 0.00 0.00 5.14
7653 8815 6.829229 ATACTAATGATACGACGGGATTGA 57.171 37.500 0.00 0.00 0.00 2.57
7659 8821 4.509616 TGATACGACGGGATTGATTTTGT 58.490 39.130 0.00 0.00 0.00 2.83
7660 8822 4.331443 TGATACGACGGGATTGATTTTGTG 59.669 41.667 0.00 0.00 0.00 3.33
7663 8825 2.742053 CGACGGGATTGATTTTGTGTCT 59.258 45.455 0.00 0.00 0.00 3.41
7664 8826 3.181520 CGACGGGATTGATTTTGTGTCTC 60.182 47.826 0.00 0.00 0.00 3.36
7666 8828 4.141287 ACGGGATTGATTTTGTGTCTCAA 58.859 39.130 0.00 0.00 33.75 3.02
7667 8829 4.216257 ACGGGATTGATTTTGTGTCTCAAG 59.784 41.667 0.00 0.00 37.35 3.02
7677 8845 9.897744 TGATTTTGTGTCTCAAGAAATATTGAC 57.102 29.630 0.00 0.00 37.35 3.18
7681 8849 8.450578 TTGTGTCTCAAGAAATATTGACAACT 57.549 30.769 5.82 0.00 36.42 3.16
7683 8851 8.559536 TGTGTCTCAAGAAATATTGACAACTTC 58.440 33.333 5.82 0.00 36.42 3.01
7720 8889 1.753073 CTGCTATTTTGGGGCTGGAAG 59.247 52.381 0.00 0.00 0.00 3.46
7741 8910 7.879677 TGGAAGCATAATATGTCCTAGATGTTG 59.120 37.037 10.16 0.00 0.00 3.33
7747 8916 9.546428 CATAATATGTCCTAGATGTTGTCAACA 57.454 33.333 20.28 20.28 46.94 3.33
7748 8917 7.849804 AATATGTCCTAGATGTTGTCAACAC 57.150 36.000 20.41 13.80 45.50 3.32
7761 8930 3.537580 TGTCAACACACTTAACAGGACC 58.462 45.455 0.00 0.00 0.00 4.46
7764 8933 5.104859 TGTCAACACACTTAACAGGACCTTA 60.105 40.000 0.00 0.00 0.00 2.69
7855 9730 5.140454 AGCAGGTTACCTTCATGAAAAAGT 58.860 37.500 9.88 9.71 0.00 2.66
7859 9734 7.595130 GCAGGTTACCTTCATGAAAAAGTAAAG 59.405 37.037 19.24 15.03 0.00 1.85
7862 9737 9.244799 GGTTACCTTCATGAAAAAGTAAAGTTG 57.755 33.333 19.24 2.70 0.00 3.16
7893 9768 5.947228 TGGTGTGTCATTCTGATTTTCTC 57.053 39.130 0.00 0.00 0.00 2.87
7908 9783 6.969043 TGATTTTCTCCCACATAAGTACCAT 58.031 36.000 0.00 0.00 0.00 3.55
7909 9784 6.828273 TGATTTTCTCCCACATAAGTACCATG 59.172 38.462 4.01 4.01 0.00 3.66
7911 9786 5.353394 TTCTCCCACATAAGTACCATGAC 57.647 43.478 11.07 0.00 0.00 3.06
7913 9788 4.968719 TCTCCCACATAAGTACCATGACAT 59.031 41.667 11.07 0.00 0.00 3.06
7914 9789 5.034852 TCCCACATAAGTACCATGACATG 57.965 43.478 8.56 8.56 0.00 3.21
7948 9823 5.812652 ACAAAGCAACTGAAAATGCAAATG 58.187 33.333 0.00 0.00 44.95 2.32
8017 9892 4.439057 TGCCTCGTATGGTAAACTGAATC 58.561 43.478 0.00 0.00 0.00 2.52
8025 9900 7.021196 CGTATGGTAAACTGAATCCTTGTTTG 58.979 38.462 0.00 0.00 35.77 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.046663 TGTTTTTCTTTCTTCAACCCAGCTT 60.047 36.000 0.00 0.00 0.00 3.74
2 3 4.466015 TGTTTTTCTTTCTTCAACCCAGCT 59.534 37.500 0.00 0.00 0.00 4.24
3 4 4.754322 TGTTTTTCTTTCTTCAACCCAGC 58.246 39.130 0.00 0.00 0.00 4.85
4 5 5.985530 GGATGTTTTTCTTTCTTCAACCCAG 59.014 40.000 0.00 0.00 0.00 4.45
5 6 5.163353 GGGATGTTTTTCTTTCTTCAACCCA 60.163 40.000 0.00 0.00 37.67 4.51
6 7 5.297547 GGGATGTTTTTCTTTCTTCAACCC 58.702 41.667 0.00 0.00 32.54 4.11
7 8 5.297547 GGGGATGTTTTTCTTTCTTCAACC 58.702 41.667 0.00 0.00 0.00 3.77
8 9 5.297547 GGGGGATGTTTTTCTTTCTTCAAC 58.702 41.667 0.00 0.00 0.00 3.18
9 10 4.038642 CGGGGGATGTTTTTCTTTCTTCAA 59.961 41.667 0.00 0.00 0.00 2.69
10 11 3.572255 CGGGGGATGTTTTTCTTTCTTCA 59.428 43.478 0.00 0.00 0.00 3.02
11 12 3.614150 GCGGGGGATGTTTTTCTTTCTTC 60.614 47.826 0.00 0.00 0.00 2.87
12 13 2.299013 GCGGGGGATGTTTTTCTTTCTT 59.701 45.455 0.00 0.00 0.00 2.52
13 14 1.893137 GCGGGGGATGTTTTTCTTTCT 59.107 47.619 0.00 0.00 0.00 2.52
14 15 1.616374 TGCGGGGGATGTTTTTCTTTC 59.384 47.619 0.00 0.00 0.00 2.62
15 16 1.618343 CTGCGGGGGATGTTTTTCTTT 59.382 47.619 0.00 0.00 0.00 2.52
16 17 1.203001 TCTGCGGGGGATGTTTTTCTT 60.203 47.619 0.00 0.00 0.00 2.52
17 18 0.404040 TCTGCGGGGGATGTTTTTCT 59.596 50.000 0.00 0.00 0.00 2.52
18 19 1.253100 TTCTGCGGGGGATGTTTTTC 58.747 50.000 0.00 0.00 0.00 2.29
19 20 1.343142 GTTTCTGCGGGGGATGTTTTT 59.657 47.619 0.00 0.00 0.00 1.94
20 21 0.966179 GTTTCTGCGGGGGATGTTTT 59.034 50.000 0.00 0.00 0.00 2.43
21 22 0.112412 AGTTTCTGCGGGGGATGTTT 59.888 50.000 0.00 0.00 0.00 2.83
22 23 0.112412 AAGTTTCTGCGGGGGATGTT 59.888 50.000 0.00 0.00 0.00 2.71
23 24 0.112412 AAAGTTTCTGCGGGGGATGT 59.888 50.000 0.00 0.00 0.00 3.06
24 25 0.527565 CAAAGTTTCTGCGGGGGATG 59.472 55.000 0.00 0.00 0.00 3.51
25 26 0.404040 TCAAAGTTTCTGCGGGGGAT 59.596 50.000 0.00 0.00 0.00 3.85
26 27 0.536460 GTCAAAGTTTCTGCGGGGGA 60.536 55.000 0.00 0.00 0.00 4.81
27 28 0.821711 TGTCAAAGTTTCTGCGGGGG 60.822 55.000 0.00 0.00 0.00 5.40
28 29 1.028905 TTGTCAAAGTTTCTGCGGGG 58.971 50.000 0.00 0.00 0.00 5.73
29 30 2.554032 AGATTGTCAAAGTTTCTGCGGG 59.446 45.455 0.00 0.00 0.00 6.13
30 31 3.904136 AGATTGTCAAAGTTTCTGCGG 57.096 42.857 0.00 0.00 0.00 5.69
31 32 5.514279 AGAAAGATTGTCAAAGTTTCTGCG 58.486 37.500 18.16 0.00 33.96 5.18
32 33 8.856490 TTTAGAAAGATTGTCAAAGTTTCTGC 57.144 30.769 23.40 7.10 35.14 4.26
37 38 9.921637 TGTGTTTTTAGAAAGATTGTCAAAGTT 57.078 25.926 0.00 0.00 0.00 2.66
42 43 8.816144 GCAAATGTGTTTTTAGAAAGATTGTCA 58.184 29.630 0.00 0.00 0.00 3.58
43 44 7.998212 CGCAAATGTGTTTTTAGAAAGATTGTC 59.002 33.333 0.00 0.00 0.00 3.18
44 45 7.704472 TCGCAAATGTGTTTTTAGAAAGATTGT 59.296 29.630 0.00 0.00 0.00 2.71
45 46 8.060020 TCGCAAATGTGTTTTTAGAAAGATTG 57.940 30.769 0.00 0.00 0.00 2.67
46 47 8.641499 TTCGCAAATGTGTTTTTAGAAAGATT 57.359 26.923 0.00 0.00 0.00 2.40
47 48 8.816640 ATTCGCAAATGTGTTTTTAGAAAGAT 57.183 26.923 0.00 0.00 0.00 2.40
48 49 9.906660 ATATTCGCAAATGTGTTTTTAGAAAGA 57.093 25.926 0.00 0.00 0.00 2.52
50 51 8.845648 CGATATTCGCAAATGTGTTTTTAGAAA 58.154 29.630 0.00 0.00 31.14 2.52
51 52 8.375717 CGATATTCGCAAATGTGTTTTTAGAA 57.624 30.769 0.00 0.00 31.14 2.10
52 53 7.946918 CGATATTCGCAAATGTGTTTTTAGA 57.053 32.000 0.00 0.00 31.14 2.10
68 69 4.794248 TGAAATTCCTGTGCGATATTCG 57.206 40.909 0.00 0.00 43.89 3.34
86 87 9.513906 TCAAAGTTATACCACTTCATGAATGAA 57.486 29.630 8.96 5.65 43.94 2.57
87 88 8.946085 GTCAAAGTTATACCACTTCATGAATGA 58.054 33.333 8.96 2.12 35.87 2.57
88 89 8.729756 TGTCAAAGTTATACCACTTCATGAATG 58.270 33.333 8.96 9.35 35.87 2.67
89 90 8.862325 TGTCAAAGTTATACCACTTCATGAAT 57.138 30.769 8.96 0.00 35.87 2.57
90 91 8.684386 TTGTCAAAGTTATACCACTTCATGAA 57.316 30.769 8.12 8.12 35.87 2.57
91 92 8.862325 ATTGTCAAAGTTATACCACTTCATGA 57.138 30.769 0.00 0.00 35.87 3.07
92 93 8.729756 TGATTGTCAAAGTTATACCACTTCATG 58.270 33.333 0.00 0.00 35.87 3.07
93 94 8.862325 TGATTGTCAAAGTTATACCACTTCAT 57.138 30.769 0.00 0.00 35.87 2.57
94 95 8.862325 ATGATTGTCAAAGTTATACCACTTCA 57.138 30.769 0.00 0.00 35.87 3.02
95 96 9.559958 CAATGATTGTCAAAGTTATACCACTTC 57.440 33.333 0.00 0.00 35.87 3.01
96 97 9.077885 ACAATGATTGTCAAAGTTATACCACTT 57.922 29.630 4.72 0.00 40.56 3.16
97 98 8.635765 ACAATGATTGTCAAAGTTATACCACT 57.364 30.769 4.72 0.00 40.56 4.00
125 126 2.158475 TGCTCCTCCTGGATGTGTTTTT 60.158 45.455 0.00 0.00 42.29 1.94
126 127 1.425066 TGCTCCTCCTGGATGTGTTTT 59.575 47.619 0.00 0.00 42.29 2.43
127 128 1.067295 TGCTCCTCCTGGATGTGTTT 58.933 50.000 0.00 0.00 42.29 2.83
128 129 0.326264 GTGCTCCTCCTGGATGTGTT 59.674 55.000 0.00 0.00 42.29 3.32
129 130 0.837691 TGTGCTCCTCCTGGATGTGT 60.838 55.000 0.00 0.00 42.29 3.72
130 131 0.325933 TTGTGCTCCTCCTGGATGTG 59.674 55.000 0.00 0.00 42.29 3.21
131 132 1.064906 CATTGTGCTCCTCCTGGATGT 60.065 52.381 0.00 0.00 42.29 3.06
132 133 1.064906 ACATTGTGCTCCTCCTGGATG 60.065 52.381 0.00 0.00 42.29 3.51
133 134 1.293062 ACATTGTGCTCCTCCTGGAT 58.707 50.000 0.00 0.00 42.29 3.41
134 135 1.067295 AACATTGTGCTCCTCCTGGA 58.933 50.000 0.00 0.00 40.69 3.86
135 136 2.237143 TCTAACATTGTGCTCCTCCTGG 59.763 50.000 0.00 0.00 0.00 4.45
136 137 3.616956 TCTAACATTGTGCTCCTCCTG 57.383 47.619 0.00 0.00 0.00 3.86
137 138 4.384647 GGAATCTAACATTGTGCTCCTCCT 60.385 45.833 0.00 0.00 0.00 3.69
138 139 3.879892 GGAATCTAACATTGTGCTCCTCC 59.120 47.826 0.00 0.00 0.00 4.30
139 140 4.333926 GTGGAATCTAACATTGTGCTCCTC 59.666 45.833 0.00 0.00 0.00 3.71
140 141 4.263462 TGTGGAATCTAACATTGTGCTCCT 60.263 41.667 0.00 0.00 0.00 3.69
141 142 4.009675 TGTGGAATCTAACATTGTGCTCC 58.990 43.478 0.00 0.00 0.00 4.70
142 143 4.697352 ACTGTGGAATCTAACATTGTGCTC 59.303 41.667 0.00 0.00 0.00 4.26
143 144 4.655963 ACTGTGGAATCTAACATTGTGCT 58.344 39.130 0.00 0.00 0.00 4.40
144 145 5.376854 AACTGTGGAATCTAACATTGTGC 57.623 39.130 0.00 0.00 0.00 4.57
145 146 6.144402 GCAAAACTGTGGAATCTAACATTGTG 59.856 38.462 0.00 0.00 0.00 3.33
146 147 6.183360 TGCAAAACTGTGGAATCTAACATTGT 60.183 34.615 0.00 0.00 0.00 2.71
147 148 6.144402 GTGCAAAACTGTGGAATCTAACATTG 59.856 38.462 0.00 0.00 0.00 2.82
148 149 6.183360 TGTGCAAAACTGTGGAATCTAACATT 60.183 34.615 0.00 0.00 0.00 2.71
149 150 5.301551 TGTGCAAAACTGTGGAATCTAACAT 59.698 36.000 0.00 0.00 0.00 2.71
150 151 4.642437 TGTGCAAAACTGTGGAATCTAACA 59.358 37.500 0.00 0.00 0.00 2.41
151 152 5.181690 TGTGCAAAACTGTGGAATCTAAC 57.818 39.130 0.00 0.00 0.00 2.34
152 153 5.843673 TTGTGCAAAACTGTGGAATCTAA 57.156 34.783 0.00 0.00 0.00 2.10
153 154 5.334802 CGATTGTGCAAAACTGTGGAATCTA 60.335 40.000 0.00 0.00 0.00 1.98
154 155 4.557296 CGATTGTGCAAAACTGTGGAATCT 60.557 41.667 0.00 0.00 0.00 2.40
155 156 3.670055 CGATTGTGCAAAACTGTGGAATC 59.330 43.478 0.00 0.00 0.00 2.52
156 157 3.641648 CGATTGTGCAAAACTGTGGAAT 58.358 40.909 0.00 0.00 0.00 3.01
157 158 2.797792 GCGATTGTGCAAAACTGTGGAA 60.798 45.455 0.00 0.00 34.15 3.53
158 159 1.268999 GCGATTGTGCAAAACTGTGGA 60.269 47.619 0.00 0.00 34.15 4.02
159 160 1.130955 GCGATTGTGCAAAACTGTGG 58.869 50.000 0.00 0.00 34.15 4.17
160 161 0.771756 CGCGATTGTGCAAAACTGTG 59.228 50.000 0.00 0.00 34.15 3.66
161 162 3.162499 CGCGATTGTGCAAAACTGT 57.838 47.368 0.00 0.00 34.15 3.55
186 187 2.628106 CGTGCGCTACATGATGCC 59.372 61.111 9.73 0.00 37.49 4.40
192 193 0.319040 CTAGATGGCGTGCGCTACAT 60.319 55.000 16.21 11.62 41.60 2.29
244 245 6.485648 GGGCTACTAGTTTGTCTCTTCAAAAA 59.514 38.462 0.00 0.00 38.71 1.94
246 247 5.512576 GGGGCTACTAGTTTGTCTCTTCAAA 60.513 44.000 0.00 0.00 35.36 2.69
253 254 3.476485 AGAGGGGCTACTAGTTTGTCT 57.524 47.619 0.00 0.00 0.00 3.41
254 255 4.554960 AAAGAGGGGCTACTAGTTTGTC 57.445 45.455 0.00 0.00 0.00 3.18
327 352 1.271656 AGTGCGTTGTACTCCACTACC 59.728 52.381 0.00 0.00 36.82 3.18
328 353 2.719426 AGTGCGTTGTACTCCACTAC 57.281 50.000 0.00 0.00 36.82 2.73
374 402 7.442062 GTGATGGGAATTTTCATTGAAAAGTGT 59.558 33.333 24.61 14.64 43.33 3.55
407 435 1.829222 TGGTGTTATCGAAGGGAGGTC 59.171 52.381 0.00 0.00 0.00 3.85
408 436 1.946984 TGGTGTTATCGAAGGGAGGT 58.053 50.000 0.00 0.00 0.00 3.85
491 533 4.139786 GGAAAAGGAAAGGAAACGGTAGT 58.860 43.478 0.00 0.00 0.00 2.73
501 543 1.982395 GGCGGGGGAAAAGGAAAGG 60.982 63.158 0.00 0.00 0.00 3.11
502 544 1.982395 GGGCGGGGGAAAAGGAAAG 60.982 63.158 0.00 0.00 0.00 2.62
504 554 2.861974 AGGGCGGGGGAAAAGGAA 60.862 61.111 0.00 0.00 0.00 3.36
521 571 0.531200 AAAACAAACCAAACGGCGGA 59.469 45.000 13.24 0.00 0.00 5.54
528 578 3.487209 GGCGTCGTAGAAAACAAACCAAA 60.487 43.478 0.00 0.00 39.69 3.28
529 579 2.031930 GGCGTCGTAGAAAACAAACCAA 59.968 45.455 0.00 0.00 39.69 3.67
530 580 1.598601 GGCGTCGTAGAAAACAAACCA 59.401 47.619 0.00 0.00 39.69 3.67
531 581 1.869132 AGGCGTCGTAGAAAACAAACC 59.131 47.619 0.00 0.00 39.69 3.27
532 582 2.899977 CAGGCGTCGTAGAAAACAAAC 58.100 47.619 0.00 0.00 39.69 2.93
579 629 2.376855 CAATTAATCCTCCCTCCCTCCC 59.623 54.545 0.00 0.00 0.00 4.30
628 678 2.159973 CGTGATAAATACATCCGCTGCG 60.160 50.000 16.34 16.34 0.00 5.18
629 679 2.157668 CCGTGATAAATACATCCGCTGC 59.842 50.000 0.00 0.00 0.00 5.25
630 680 3.649073 TCCGTGATAAATACATCCGCTG 58.351 45.455 0.00 0.00 0.00 5.18
631 681 4.056050 GTTCCGTGATAAATACATCCGCT 58.944 43.478 0.00 0.00 0.00 5.52
632 682 3.185797 GGTTCCGTGATAAATACATCCGC 59.814 47.826 0.00 0.00 0.00 5.54
633 683 3.744426 GGGTTCCGTGATAAATACATCCG 59.256 47.826 0.00 0.00 0.00 4.18
675 733 2.032528 CTCCTCTTGTGGCCGCAA 59.967 61.111 29.08 29.08 0.00 4.85
682 740 1.071385 ACCTCTTGTGCTCCTCTTGTG 59.929 52.381 0.00 0.00 0.00 3.33
683 741 1.346068 GACCTCTTGTGCTCCTCTTGT 59.654 52.381 0.00 0.00 0.00 3.16
684 742 1.345741 TGACCTCTTGTGCTCCTCTTG 59.654 52.381 0.00 0.00 0.00 3.02
685 743 1.722034 TGACCTCTTGTGCTCCTCTT 58.278 50.000 0.00 0.00 0.00 2.85
686 744 1.722034 TTGACCTCTTGTGCTCCTCT 58.278 50.000 0.00 0.00 0.00 3.69
687 745 2.147150 GTTTGACCTCTTGTGCTCCTC 58.853 52.381 0.00 0.00 0.00 3.71
688 746 1.202818 GGTTTGACCTCTTGTGCTCCT 60.203 52.381 0.00 0.00 34.73 3.69
689 747 1.239347 GGTTTGACCTCTTGTGCTCC 58.761 55.000 0.00 0.00 34.73 4.70
770 828 4.657969 AGGAAGAGAGAGGATGGGTTAATG 59.342 45.833 0.00 0.00 0.00 1.90
792 854 0.746923 GGCTGCGGGGTAAGGTAAAG 60.747 60.000 0.00 0.00 0.00 1.85
808 873 1.006102 CGAAGACAGACAACGGGCT 60.006 57.895 0.00 0.00 0.00 5.19
809 874 2.027625 CCGAAGACAGACAACGGGC 61.028 63.158 0.00 0.00 39.92 6.13
813 878 4.569564 ACTGTAAAACCGAAGACAGACAAC 59.430 41.667 7.81 0.00 41.51 3.32
814 879 4.569162 CACTGTAAAACCGAAGACAGACAA 59.431 41.667 7.81 0.00 41.51 3.18
816 881 3.493503 CCACTGTAAAACCGAAGACAGAC 59.506 47.826 7.81 0.00 41.51 3.51
818 883 2.223377 GCCACTGTAAAACCGAAGACAG 59.777 50.000 0.00 0.00 43.97 3.51
819 884 2.158871 AGCCACTGTAAAACCGAAGACA 60.159 45.455 0.00 0.00 0.00 3.41
868 941 3.258228 ATCAGCAGCAAGGTGGCGA 62.258 57.895 8.25 0.00 45.66 5.54
1344 1454 0.609957 TCTCGGCGAGGAAGTGGTTA 60.610 55.000 33.93 10.97 0.00 2.85
1429 1545 6.296026 ACTGTGCTCTTCCTCTAGTAGATAG 58.704 44.000 0.00 0.00 0.00 2.08
1431 1547 5.124036 ACTGTGCTCTTCCTCTAGTAGAT 57.876 43.478 0.00 0.00 0.00 1.98
1432 1548 4.519213 GACTGTGCTCTTCCTCTAGTAGA 58.481 47.826 0.00 0.00 0.00 2.59
1433 1549 3.311322 CGACTGTGCTCTTCCTCTAGTAG 59.689 52.174 0.00 0.00 0.00 2.57
1434 1550 3.055312 TCGACTGTGCTCTTCCTCTAGTA 60.055 47.826 0.00 0.00 0.00 1.82
1438 1554 1.748493 GATCGACTGTGCTCTTCCTCT 59.252 52.381 0.00 0.00 0.00 3.69
1445 1561 3.248841 TCTTATCTCGATCGACTGTGCTC 59.751 47.826 15.15 0.00 0.00 4.26
1485 1601 2.073307 CGTGATCTTGACCTGCACG 58.927 57.895 0.00 0.00 44.78 5.34
1486 1602 1.639298 GGCGTGATCTTGACCTGCAC 61.639 60.000 0.00 0.00 0.00 4.57
1793 1926 2.818714 CCCTCTCGCTGCAGCAAG 60.819 66.667 36.03 29.07 42.21 4.01
1794 1927 3.306595 CTCCCTCTCGCTGCAGCAA 62.307 63.158 36.03 20.37 42.21 3.91
1795 1928 3.767806 CTCCCTCTCGCTGCAGCA 61.768 66.667 36.03 22.30 42.21 4.41
1796 1929 2.418910 TACTCCCTCTCGCTGCAGC 61.419 63.158 29.12 29.12 37.78 5.25
1797 1930 1.315981 TGTACTCCCTCTCGCTGCAG 61.316 60.000 10.11 10.11 0.00 4.41
1823 1956 3.487202 GCGCGGCGAACTTGATGA 61.487 61.111 28.54 0.00 0.00 2.92
1972 2105 2.592459 GCGTGCCGTTGTAATTTGAATC 59.408 45.455 0.00 0.00 0.00 2.52
1983 2116 4.101790 GGGTGATGCGTGCCGTTG 62.102 66.667 0.00 0.00 0.00 4.10
2255 2394 1.168407 GCAGCAAGCACAGGACAAGA 61.168 55.000 0.00 0.00 44.79 3.02
2287 2426 1.358877 TCTGGCATCAACGTCAATCG 58.641 50.000 0.00 0.00 46.00 3.34
2367 2506 2.648059 CTTGACATGACATCCTTCCCC 58.352 52.381 0.00 0.00 0.00 4.81
2397 2536 8.586273 CAATTTACCTTAATTCTGTTTGCATCG 58.414 33.333 0.00 0.00 0.00 3.84
2492 2644 3.746492 CCAGCTAACAGTCTGTAACCAAC 59.254 47.826 5.77 0.00 0.00 3.77
2563 2715 0.384669 GATCTGCTTGGCATTGAGGC 59.615 55.000 0.00 0.00 38.13 4.70
2567 2719 3.861276 TTCTTGATCTGCTTGGCATTG 57.139 42.857 0.00 0.00 38.13 2.82
2727 2879 5.587443 TGTAGAAACTTGCCAGATGATGATG 59.413 40.000 0.00 0.00 0.00 3.07
2729 2881 4.937620 GTGTAGAAACTTGCCAGATGATGA 59.062 41.667 0.00 0.00 0.00 2.92
2733 2885 5.163814 GCTTAGTGTAGAAACTTGCCAGATG 60.164 44.000 0.00 0.00 0.00 2.90
2734 2886 4.938226 GCTTAGTGTAGAAACTTGCCAGAT 59.062 41.667 0.00 0.00 0.00 2.90
2736 2888 4.319177 AGCTTAGTGTAGAAACTTGCCAG 58.681 43.478 0.00 0.00 32.38 4.85
2740 2892 6.853362 GCTGAAAAGCTTAGTGTAGAAACTTG 59.147 38.462 0.00 0.00 0.00 3.16
2741 2893 6.542370 TGCTGAAAAGCTTAGTGTAGAAACTT 59.458 34.615 0.00 0.00 35.49 2.66
2744 2896 6.935741 TTGCTGAAAAGCTTAGTGTAGAAA 57.064 33.333 0.00 0.00 35.49 2.52
2745 2897 6.317642 TGTTTGCTGAAAAGCTTAGTGTAGAA 59.682 34.615 0.00 0.00 35.49 2.10
2768 3013 2.154462 CGAATCAAGAGGCCTTTGTGT 58.846 47.619 6.77 6.20 0.00 3.72
2791 3048 7.148120 GGTTTGAATTTTAGGGTAGGCTTAGAC 60.148 40.741 0.00 0.00 0.00 2.59
2845 3104 3.571590 AGGCTCCCTCTAGTTACTGATG 58.428 50.000 0.00 0.00 0.00 3.07
2854 3113 6.493802 TGTACATACATTTAGGCTCCCTCTAG 59.506 42.308 0.00 0.00 34.61 2.43
2860 3119 6.759272 TCTCATGTACATACATTTAGGCTCC 58.241 40.000 8.32 0.00 43.99 4.70
2875 3134 3.191078 AGCAATCAGGCTCTCATGTAC 57.809 47.619 0.00 0.00 41.05 2.90
2882 3141 4.381292 GCACATTTTTAGCAATCAGGCTCT 60.381 41.667 0.00 0.00 44.54 4.09
2913 3172 4.803088 TGTCAAAAGAAGCAAAATCAACCG 59.197 37.500 0.00 0.00 0.00 4.44
2998 3257 2.752354 TGATTGCTGAATGGTAAACCCG 59.248 45.455 0.00 0.00 35.15 5.28
3100 3359 7.686615 GCAATATACAAATTGGCCACCTAACAT 60.687 37.037 3.88 0.00 37.34 2.71
3107 3366 5.816777 ACATTGCAATATACAAATTGGCCAC 59.183 36.000 12.53 0.00 37.34 5.01
3136 3397 6.542852 CATTACAATTTGTACCGAGGAAGTG 58.457 40.000 8.75 0.00 31.69 3.16
3178 3440 6.712241 AGTCACGAGAACACAATTAATCTG 57.288 37.500 0.00 0.00 0.00 2.90
3184 3446 6.436843 AAGAAAAGTCACGAGAACACAATT 57.563 33.333 0.00 0.00 0.00 2.32
3195 3457 1.804748 GGCCTGGTAAGAAAAGTCACG 59.195 52.381 0.00 0.00 0.00 4.35
3381 3643 3.255969 TGTACAAAACCCTAGCGGATC 57.744 47.619 0.00 0.00 34.64 3.36
3526 3805 8.739972 CATTAAAGAAAAACCCTAGTAGCATGT 58.260 33.333 0.00 0.00 0.00 3.21
3632 3919 4.262463 GCGTAAGGATCTTGGTCATATCCA 60.262 45.833 12.46 0.00 41.44 3.41
3695 3982 4.961511 AGGACGCGCGCTTCAACA 62.962 61.111 34.06 0.00 0.00 3.33
3977 4264 5.636543 CCATTGATCACTTTCTGAAAAAGGC 59.363 40.000 4.18 0.00 30.60 4.35
4149 4436 4.724399 TGACAATTTACAAAGGCCTCTCA 58.276 39.130 5.23 0.00 0.00 3.27
4168 4455 3.552604 AAACAACATGGTACGCATGAC 57.447 42.857 23.07 0.00 34.39 3.06
4452 4740 4.084952 CGTTTGATGTCACCTGCAAAAATG 60.085 41.667 0.00 0.00 32.71 2.32
4919 5297 4.381079 GCATATTTTGTAACTTCCGGCCAA 60.381 41.667 2.24 0.00 0.00 4.52
5203 5581 5.590145 GACGGAGGGAGTATCTTTTACTTC 58.410 45.833 0.00 0.00 33.73 3.01
5227 5606 8.149973 TCCCATAATATAAGAGCGTTTTTGAC 57.850 34.615 0.00 0.00 0.00 3.18
5228 5607 7.444183 CCTCCCATAATATAAGAGCGTTTTTGA 59.556 37.037 0.00 0.00 0.00 2.69
5229 5608 7.444183 TCCTCCCATAATATAAGAGCGTTTTTG 59.556 37.037 0.00 0.00 0.00 2.44
5233 5612 5.187967 CCTCCTCCCATAATATAAGAGCGTT 59.812 44.000 0.00 0.00 0.00 4.84
5235 5614 4.100189 CCCTCCTCCCATAATATAAGAGCG 59.900 50.000 0.00 0.00 0.00 5.03
5236 5615 5.281314 TCCCTCCTCCCATAATATAAGAGC 58.719 45.833 0.00 0.00 0.00 4.09
5237 5616 6.507568 ACTCCCTCCTCCCATAATATAAGAG 58.492 44.000 0.00 0.00 0.00 2.85
5238 5617 6.500490 ACTCCCTCCTCCCATAATATAAGA 57.500 41.667 0.00 0.00 0.00 2.10
5239 5618 8.862091 ATTACTCCCTCCTCCCATAATATAAG 57.138 38.462 0.00 0.00 0.00 1.73
5240 5619 9.953429 CTATTACTCCCTCCTCCCATAATATAA 57.047 37.037 0.00 0.00 0.00 0.98
5241 5620 9.317713 TCTATTACTCCCTCCTCCCATAATATA 57.682 37.037 0.00 0.00 0.00 0.86
5242 5621 8.200914 TCTATTACTCCCTCCTCCCATAATAT 57.799 38.462 0.00 0.00 0.00 1.28
5243 5622 7.614473 TCTATTACTCCCTCCTCCCATAATA 57.386 40.000 0.00 0.00 0.00 0.98
5245 5624 5.961399 TCTATTACTCCCTCCTCCCATAA 57.039 43.478 0.00 0.00 0.00 1.90
5246 5625 6.745791 ACTATCTATTACTCCCTCCTCCCATA 59.254 42.308 0.00 0.00 0.00 2.74
5249 5628 5.015391 TGACTATCTATTACTCCCTCCTCCC 59.985 48.000 0.00 0.00 0.00 4.30
5250 5629 6.142259 TGACTATCTATTACTCCCTCCTCC 57.858 45.833 0.00 0.00 0.00 4.30
5251 5630 7.506261 TGTTTGACTATCTATTACTCCCTCCTC 59.494 40.741 0.00 0.00 0.00 3.71
5252 5631 7.288158 GTGTTTGACTATCTATTACTCCCTCCT 59.712 40.741 0.00 0.00 0.00 3.69
5253 5632 7.069578 TGTGTTTGACTATCTATTACTCCCTCC 59.930 40.741 0.00 0.00 0.00 4.30
5254 5633 8.008513 TGTGTTTGACTATCTATTACTCCCTC 57.991 38.462 0.00 0.00 0.00 4.30
5256 5635 9.444600 TTTTGTGTTTGACTATCTATTACTCCC 57.555 33.333 0.00 0.00 0.00 4.30
5469 5987 8.487313 TGTACATAAGAAAATACGAAGTGCAT 57.513 30.769 0.00 0.00 45.73 3.96
5470 5988 7.892778 TGTACATAAGAAAATACGAAGTGCA 57.107 32.000 0.00 0.00 45.73 4.57
5471 5989 8.388103 ACATGTACATAAGAAAATACGAAGTGC 58.612 33.333 8.32 0.00 45.73 4.40
5493 6011 5.413833 AGTCTGCTGAAATGGTTAGAACATG 59.586 40.000 0.00 0.00 0.00 3.21
5496 6014 5.239525 ACAAGTCTGCTGAAATGGTTAGAAC 59.760 40.000 10.35 0.00 0.00 3.01
5780 6299 9.749996 AATATGGATCAGAGGGGTATTACATAT 57.250 33.333 0.00 0.00 31.35 1.78
5826 6345 5.778161 TGTCGCTGATTTAGTACACATTG 57.222 39.130 0.00 0.00 0.00 2.82
5828 6347 6.985188 AATTGTCGCTGATTTAGTACACAT 57.015 33.333 0.00 0.00 0.00 3.21
5829 6348 7.892778 TTAATTGTCGCTGATTTAGTACACA 57.107 32.000 0.00 0.00 0.00 3.72
5832 6351 8.212495 CCGTATTAATTGTCGCTGATTTAGTAC 58.788 37.037 0.00 0.00 0.00 2.73
5834 6353 6.982141 TCCGTATTAATTGTCGCTGATTTAGT 59.018 34.615 0.00 0.00 0.00 2.24
5835 6354 7.402811 TCCGTATTAATTGTCGCTGATTTAG 57.597 36.000 0.00 0.00 0.00 1.85
5856 6375 2.389715 AGTAGTTCTCCCTCCAATCCG 58.610 52.381 0.00 0.00 0.00 4.18
5861 6380 5.309543 TCATGAAAAAGTAGTTCTCCCTCCA 59.690 40.000 0.00 0.00 0.00 3.86
5875 6394 7.977293 TGGTTCTGAATGCATATCATGAAAAAG 59.023 33.333 0.00 0.00 35.13 2.27
5876 6395 7.760794 GTGGTTCTGAATGCATATCATGAAAAA 59.239 33.333 0.00 0.00 35.13 1.94
6187 6721 5.106555 CCAGAGCAACGACAAATTCAGTATT 60.107 40.000 0.00 0.00 0.00 1.89
6189 6723 3.745975 CCAGAGCAACGACAAATTCAGTA 59.254 43.478 0.00 0.00 0.00 2.74
6252 6786 5.526846 AGTGAGAGCTTTGTTGAAAAGAGAG 59.473 40.000 2.10 0.00 0.00 3.20
6285 6819 3.300388 CCATGTCTCCTCTGCTAGGTAA 58.700 50.000 5.70 0.00 46.62 2.85
6312 6849 9.555727 TTGGCATACTATCAGTTAGTTTATTCC 57.444 33.333 0.00 0.00 41.49 3.01
6618 7161 6.017605 AGAGCAAGAGACAAAACATAACACAG 60.018 38.462 0.00 0.00 0.00 3.66
6710 7253 2.171940 GAAACAGAGCGCGTGCAG 59.828 61.111 24.79 14.70 46.23 4.41
6829 7376 2.031333 GGAGCAGCAAAGACAAAGACAG 60.031 50.000 0.00 0.00 0.00 3.51
6944 7491 0.687920 TACCATTCGTGCCACTGGAA 59.312 50.000 8.46 0.00 32.92 3.53
7117 7665 7.941431 AATGCAGAAATGATCTTCTCTTCTT 57.059 32.000 0.00 0.00 35.73 2.52
7232 7785 6.919775 TCTTAGCCTAACTTCTTTCAGACT 57.080 37.500 0.00 0.00 0.00 3.24
7234 7787 6.213600 ACCATCTTAGCCTAACTTCTTTCAGA 59.786 38.462 0.00 0.00 0.00 3.27
7235 7788 6.410540 ACCATCTTAGCCTAACTTCTTTCAG 58.589 40.000 0.00 0.00 0.00 3.02
7236 7789 6.374417 ACCATCTTAGCCTAACTTCTTTCA 57.626 37.500 0.00 0.00 0.00 2.69
7237 7790 8.966069 AATACCATCTTAGCCTAACTTCTTTC 57.034 34.615 0.00 0.00 0.00 2.62
7238 7791 8.548877 TGAATACCATCTTAGCCTAACTTCTTT 58.451 33.333 0.00 0.00 0.00 2.52
7239 7792 8.090788 TGAATACCATCTTAGCCTAACTTCTT 57.909 34.615 0.00 0.00 0.00 2.52
7241 7794 7.988028 ACTTGAATACCATCTTAGCCTAACTTC 59.012 37.037 0.00 0.00 0.00 3.01
7242 7795 7.862675 ACTTGAATACCATCTTAGCCTAACTT 58.137 34.615 0.00 0.00 0.00 2.66
7243 7796 7.345914 AGACTTGAATACCATCTTAGCCTAACT 59.654 37.037 0.00 0.00 0.00 2.24
7244 7797 7.501844 AGACTTGAATACCATCTTAGCCTAAC 58.498 38.462 0.00 0.00 0.00 2.34
7248 7801 5.918608 TGAGACTTGAATACCATCTTAGCC 58.081 41.667 0.00 0.00 0.00 3.93
7249 7802 8.443953 AAATGAGACTTGAATACCATCTTAGC 57.556 34.615 0.00 0.00 0.00 3.09
7251 7804 8.474831 TCGAAATGAGACTTGAATACCATCTTA 58.525 33.333 0.00 0.00 0.00 2.10
7252 7805 7.331026 TCGAAATGAGACTTGAATACCATCTT 58.669 34.615 0.00 0.00 0.00 2.40
7255 7808 7.504403 AGATCGAAATGAGACTTGAATACCAT 58.496 34.615 0.00 0.00 0.00 3.55
7256 7809 6.878317 AGATCGAAATGAGACTTGAATACCA 58.122 36.000 0.00 0.00 0.00 3.25
7257 7810 7.492669 TGAAGATCGAAATGAGACTTGAATACC 59.507 37.037 0.00 0.00 30.75 2.73
7258 7811 8.412608 TGAAGATCGAAATGAGACTTGAATAC 57.587 34.615 0.00 0.00 30.75 1.89
7259 7812 9.091784 CTTGAAGATCGAAATGAGACTTGAATA 57.908 33.333 0.00 0.00 30.75 1.75
7260 7813 7.065563 CCTTGAAGATCGAAATGAGACTTGAAT 59.934 37.037 0.00 0.00 30.75 2.57
7261 7814 6.369890 CCTTGAAGATCGAAATGAGACTTGAA 59.630 38.462 0.00 0.00 30.75 2.69
7262 7815 5.871524 CCTTGAAGATCGAAATGAGACTTGA 59.128 40.000 0.00 0.00 30.75 3.02
7263 7816 5.871524 TCCTTGAAGATCGAAATGAGACTTG 59.128 40.000 0.00 0.00 30.75 3.16
7264 7817 6.042638 TCCTTGAAGATCGAAATGAGACTT 57.957 37.500 0.00 0.00 32.42 3.01
7265 7818 5.667539 TCCTTGAAGATCGAAATGAGACT 57.332 39.130 0.00 0.00 0.00 3.24
7266 7819 5.236047 CCATCCTTGAAGATCGAAATGAGAC 59.764 44.000 0.00 0.00 0.00 3.36
7267 7820 5.104776 ACCATCCTTGAAGATCGAAATGAGA 60.105 40.000 0.00 0.00 0.00 3.27
7268 7821 5.121811 ACCATCCTTGAAGATCGAAATGAG 58.878 41.667 0.00 0.00 0.00 2.90
7269 7822 5.102953 ACCATCCTTGAAGATCGAAATGA 57.897 39.130 0.00 0.00 0.00 2.57
7270 7823 5.355071 TGAACCATCCTTGAAGATCGAAATG 59.645 40.000 0.00 0.00 0.00 2.32
7271 7824 5.500234 TGAACCATCCTTGAAGATCGAAAT 58.500 37.500 0.00 0.00 0.00 2.17
7272 7825 4.905429 TGAACCATCCTTGAAGATCGAAA 58.095 39.130 0.00 0.00 0.00 3.46
7273 7826 4.551702 TGAACCATCCTTGAAGATCGAA 57.448 40.909 0.00 0.00 0.00 3.71
7274 7827 4.760530 ATGAACCATCCTTGAAGATCGA 57.239 40.909 0.00 0.00 0.00 3.59
7275 7828 4.877823 TGAATGAACCATCCTTGAAGATCG 59.122 41.667 0.00 0.00 0.00 3.69
7276 7829 5.884792 AGTGAATGAACCATCCTTGAAGATC 59.115 40.000 0.00 0.00 0.00 2.75
7277 7830 5.824421 AGTGAATGAACCATCCTTGAAGAT 58.176 37.500 0.00 0.00 0.00 2.40
7278 7831 5.246981 AGTGAATGAACCATCCTTGAAGA 57.753 39.130 0.00 0.00 0.00 2.87
7279 7832 5.065731 GCTAGTGAATGAACCATCCTTGAAG 59.934 44.000 0.00 0.00 0.00 3.02
7280 7833 4.943705 GCTAGTGAATGAACCATCCTTGAA 59.056 41.667 0.00 0.00 0.00 2.69
7281 7834 4.019411 TGCTAGTGAATGAACCATCCTTGA 60.019 41.667 0.00 0.00 0.00 3.02
7282 7835 4.264253 TGCTAGTGAATGAACCATCCTTG 58.736 43.478 0.00 0.00 0.00 3.61
7283 7836 4.574674 TGCTAGTGAATGAACCATCCTT 57.425 40.909 0.00 0.00 0.00 3.36
7284 7837 4.785346 ATGCTAGTGAATGAACCATCCT 57.215 40.909 0.00 0.00 0.00 3.24
7285 7838 6.017605 CAGTTATGCTAGTGAATGAACCATCC 60.018 42.308 0.00 0.00 0.00 3.51
7286 7839 6.763135 TCAGTTATGCTAGTGAATGAACCATC 59.237 38.462 0.00 0.00 0.00 3.51
7287 7840 6.540189 GTCAGTTATGCTAGTGAATGAACCAT 59.460 38.462 0.00 0.00 0.00 3.55
7288 7841 5.874810 GTCAGTTATGCTAGTGAATGAACCA 59.125 40.000 0.00 0.00 0.00 3.67
7289 7842 6.109359 AGTCAGTTATGCTAGTGAATGAACC 58.891 40.000 0.00 0.00 0.00 3.62
7290 7843 7.459486 CAAGTCAGTTATGCTAGTGAATGAAC 58.541 38.462 0.00 0.00 0.00 3.18
7291 7844 6.092670 GCAAGTCAGTTATGCTAGTGAATGAA 59.907 38.462 0.00 0.00 37.12 2.57
7292 7845 5.582269 GCAAGTCAGTTATGCTAGTGAATGA 59.418 40.000 0.00 0.00 37.12 2.57
7293 7846 5.352293 TGCAAGTCAGTTATGCTAGTGAATG 59.648 40.000 0.00 0.00 40.66 2.67
7294 7847 5.491070 TGCAAGTCAGTTATGCTAGTGAAT 58.509 37.500 0.00 0.00 40.66 2.57
7295 7848 4.893608 TGCAAGTCAGTTATGCTAGTGAA 58.106 39.130 0.00 0.00 40.66 3.18
7325 7878 4.678287 GCAATTATTTCAGATGCACCGATG 59.322 41.667 0.00 0.00 37.00 3.84
7327 7880 3.947196 AGCAATTATTTCAGATGCACCGA 59.053 39.130 0.00 0.00 39.42 4.69
7329 7882 5.066893 TCAGAGCAATTATTTCAGATGCACC 59.933 40.000 0.00 0.00 39.42 5.01
7340 7893 4.957954 TGGGAAAGCATCAGAGCAATTATT 59.042 37.500 0.00 0.00 36.85 1.40
7399 8047 9.042450 TGTTCCACTCCATTTCTATACTCTTTA 57.958 33.333 0.00 0.00 0.00 1.85
7412 8060 6.725364 AGATATGTTCTTGTTCCACTCCATT 58.275 36.000 0.00 0.00 0.00 3.16
7413 8061 6.319048 AGATATGTTCTTGTTCCACTCCAT 57.681 37.500 0.00 0.00 0.00 3.41
7415 8063 7.731054 AGATAGATATGTTCTTGTTCCACTCC 58.269 38.462 0.00 0.00 35.79 3.85
7418 8066 9.347934 CGATAGATAGATATGTTCTTGTTCCAC 57.652 37.037 0.00 0.00 35.00 4.02
7439 8549 7.874016 ACTGTCACCTTAGTCTAGTATCGATAG 59.126 40.741 5.09 0.00 0.00 2.08
7440 8550 7.656542 CACTGTCACCTTAGTCTAGTATCGATA 59.343 40.741 0.00 0.00 0.00 2.92
7441 8551 6.483974 CACTGTCACCTTAGTCTAGTATCGAT 59.516 42.308 2.16 2.16 0.00 3.59
7442 8552 5.816258 CACTGTCACCTTAGTCTAGTATCGA 59.184 44.000 0.00 0.00 0.00 3.59
7461 8571 1.366366 GACGCTGGGTGTACACTGT 59.634 57.895 24.55 15.00 0.00 3.55
7462 8572 1.733041 CGACGCTGGGTGTACACTG 60.733 63.158 24.55 15.72 0.00 3.66
7464 8574 0.598158 TTTCGACGCTGGGTGTACAC 60.598 55.000 18.01 18.01 0.00 2.90
7470 8580 0.460284 CTGCTATTTCGACGCTGGGT 60.460 55.000 0.00 0.00 0.00 4.51
7471 8581 1.766143 GCTGCTATTTCGACGCTGGG 61.766 60.000 0.00 0.00 0.00 4.45
7475 8585 2.053898 GCGCTGCTATTTCGACGC 60.054 61.111 0.00 0.00 39.49 5.19
7509 8619 8.154856 GCACCTTATCATACATACCCTAGAAAA 58.845 37.037 0.00 0.00 0.00 2.29
7510 8620 7.512746 AGCACCTTATCATACATACCCTAGAAA 59.487 37.037 0.00 0.00 0.00 2.52
7511 8621 7.016914 AGCACCTTATCATACATACCCTAGAA 58.983 38.462 0.00 0.00 0.00 2.10
7512 8622 6.562228 AGCACCTTATCATACATACCCTAGA 58.438 40.000 0.00 0.00 0.00 2.43
7513 8623 6.665680 AGAGCACCTTATCATACATACCCTAG 59.334 42.308 0.00 0.00 0.00 3.02
7514 8624 6.437477 CAGAGCACCTTATCATACATACCCTA 59.563 42.308 0.00 0.00 0.00 3.53
7515 8625 5.247110 CAGAGCACCTTATCATACATACCCT 59.753 44.000 0.00 0.00 0.00 4.34
7516 8626 5.246203 TCAGAGCACCTTATCATACATACCC 59.754 44.000 0.00 0.00 0.00 3.69
7517 8627 6.346477 TCAGAGCACCTTATCATACATACC 57.654 41.667 0.00 0.00 0.00 2.73
7518 8628 8.662781 TTTTCAGAGCACCTTATCATACATAC 57.337 34.615 0.00 0.00 0.00 2.39
7520 8630 9.277783 GTATTTTCAGAGCACCTTATCATACAT 57.722 33.333 0.00 0.00 0.00 2.29
7521 8631 7.715249 GGTATTTTCAGAGCACCTTATCATACA 59.285 37.037 0.00 0.00 0.00 2.29
7522 8632 7.715249 TGGTATTTTCAGAGCACCTTATCATAC 59.285 37.037 0.00 0.00 0.00 2.39
7524 8634 6.662755 TGGTATTTTCAGAGCACCTTATCAT 58.337 36.000 0.00 0.00 0.00 2.45
7525 8635 6.061022 TGGTATTTTCAGAGCACCTTATCA 57.939 37.500 0.00 0.00 0.00 2.15
7526 8636 7.500559 AGATTGGTATTTTCAGAGCACCTTATC 59.499 37.037 0.00 0.00 0.00 1.75
7531 8659 4.943705 TCAGATTGGTATTTTCAGAGCACC 59.056 41.667 0.00 0.00 0.00 5.01
7534 8662 9.674824 CATTATTCAGATTGGTATTTTCAGAGC 57.325 33.333 0.00 0.00 0.00 4.09
7546 8674 4.571984 TGTGCGTCTCATTATTCAGATTGG 59.428 41.667 0.00 0.00 0.00 3.16
7547 8675 5.723492 TGTGCGTCTCATTATTCAGATTG 57.277 39.130 0.00 0.00 0.00 2.67
7549 8677 6.051074 TCATTGTGCGTCTCATTATTCAGAT 58.949 36.000 0.00 0.00 0.00 2.90
7556 8684 6.816140 TGAAACTATCATTGTGCGTCTCATTA 59.184 34.615 0.00 0.00 31.50 1.90
7564 8692 8.604035 ACTATTAACTGAAACTATCATTGTGCG 58.396 33.333 0.00 0.00 37.44 5.34
7576 8710 8.035984 AGCTGAGAAGGTACTATTAACTGAAAC 58.964 37.037 0.00 0.00 38.49 2.78
7629 8791 7.926674 TCAATCCCGTCGTATCATTAGTATA 57.073 36.000 0.00 0.00 0.00 1.47
7631 8793 6.829229 ATCAATCCCGTCGTATCATTAGTA 57.171 37.500 0.00 0.00 0.00 1.82
7633 8795 7.042051 ACAAAATCAATCCCGTCGTATCATTAG 60.042 37.037 0.00 0.00 0.00 1.73
7635 8797 5.588648 ACAAAATCAATCCCGTCGTATCATT 59.411 36.000 0.00 0.00 0.00 2.57
7636 8798 5.007626 CACAAAATCAATCCCGTCGTATCAT 59.992 40.000 0.00 0.00 0.00 2.45
7637 8799 4.331443 CACAAAATCAATCCCGTCGTATCA 59.669 41.667 0.00 0.00 0.00 2.15
7638 8800 4.331717 ACACAAAATCAATCCCGTCGTATC 59.668 41.667 0.00 0.00 0.00 2.24
7639 8801 4.258543 ACACAAAATCAATCCCGTCGTAT 58.741 39.130 0.00 0.00 0.00 3.06
7640 8802 3.666274 ACACAAAATCAATCCCGTCGTA 58.334 40.909 0.00 0.00 0.00 3.43
7641 8803 2.482721 GACACAAAATCAATCCCGTCGT 59.517 45.455 0.00 0.00 0.00 4.34
7642 8804 2.742053 AGACACAAAATCAATCCCGTCG 59.258 45.455 0.00 0.00 0.00 5.12
7643 8805 3.751175 TGAGACACAAAATCAATCCCGTC 59.249 43.478 0.00 0.00 0.00 4.79
7644 8806 3.750371 TGAGACACAAAATCAATCCCGT 58.250 40.909 0.00 0.00 0.00 5.28
7645 8807 4.455533 TCTTGAGACACAAAATCAATCCCG 59.544 41.667 0.00 0.00 38.08 5.14
7646 8808 5.964958 TCTTGAGACACAAAATCAATCCC 57.035 39.130 0.00 0.00 38.08 3.85
7659 8821 8.908786 AGAAGTTGTCAATATTTCTTGAGACA 57.091 30.769 1.12 1.12 35.88 3.41
7666 8828 9.247861 AGCCATAAAGAAGTTGTCAATATTTCT 57.752 29.630 0.00 0.00 0.00 2.52
7675 8843 9.765795 AGTACATATAGCCATAAAGAAGTTGTC 57.234 33.333 0.00 0.00 0.00 3.18
7677 8845 8.499162 GCAGTACATATAGCCATAAAGAAGTTG 58.501 37.037 0.00 0.00 0.00 3.16
7690 8858 5.123979 GCCCCAAAATAGCAGTACATATAGC 59.876 44.000 0.00 0.00 0.00 2.97
7695 8863 3.290710 CAGCCCCAAAATAGCAGTACAT 58.709 45.455 0.00 0.00 0.00 2.29
7710 8879 3.084786 GACATATTATGCTTCCAGCCCC 58.915 50.000 3.52 0.00 41.51 5.80
7720 8889 8.499162 GTTGACAACATCTAGGACATATTATGC 58.501 37.037 13.52 0.00 0.00 3.14
7741 8910 3.805207 AGGTCCTGTTAAGTGTGTTGAC 58.195 45.455 0.00 0.00 0.00 3.18
7785 8955 5.728471 TGTATGGGTATCGTTACGGAAAAA 58.272 37.500 4.53 0.00 0.00 1.94
7788 8958 4.998671 TTGTATGGGTATCGTTACGGAA 57.001 40.909 4.53 0.00 0.00 4.30
7790 8960 5.754406 TCATTTTGTATGGGTATCGTTACGG 59.246 40.000 4.53 0.00 0.00 4.02
7795 8965 5.751586 ACCTTCATTTTGTATGGGTATCGT 58.248 37.500 0.00 0.00 0.00 3.73
7801 9676 6.549364 TGCCTATTACCTTCATTTTGTATGGG 59.451 38.462 0.00 0.00 0.00 4.00
7855 9730 6.824196 TGACACACCATAAACTGACAACTTTA 59.176 34.615 0.00 0.00 0.00 1.85
7859 9734 5.689383 ATGACACACCATAAACTGACAAC 57.311 39.130 0.00 0.00 0.00 3.32
7862 9737 5.700832 TCAGAATGACACACCATAAACTGAC 59.299 40.000 0.00 0.00 42.56 3.51
7893 9768 4.780815 ACATGTCATGGTACTTATGTGGG 58.219 43.478 17.08 0.00 33.60 4.61
7908 9783 6.979465 TGCTTTGTTCATTTCATACATGTCA 58.021 32.000 0.00 0.00 0.00 3.58
7909 9784 7.596248 AGTTGCTTTGTTCATTTCATACATGTC 59.404 33.333 0.00 0.00 0.00 3.06
7911 9786 7.595875 TCAGTTGCTTTGTTCATTTCATACATG 59.404 33.333 0.00 0.00 0.00 3.21
7913 9788 7.036996 TCAGTTGCTTTGTTCATTTCATACA 57.963 32.000 0.00 0.00 0.00 2.29
7914 9789 7.928908 TTCAGTTGCTTTGTTCATTTCATAC 57.071 32.000 0.00 0.00 0.00 2.39
7956 9831 4.637534 AGCTGGTGACAATATAGCAGTTTG 59.362 41.667 0.00 0.00 42.67 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.