Multiple sequence alignment - TraesCS7D01G346000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G346000 chr7D 100.000 3193 0 0 1 3193 444380120 444376928 0.000000e+00 5897
1 TraesCS7D01G346000 chr7B 91.822 1712 87 28 724 2405 461247741 461246053 0.000000e+00 2337
2 TraesCS7D01G346000 chr7B 81.688 557 64 17 2660 3193 461244787 461244246 2.280000e-116 429
3 TraesCS7D01G346000 chr7B 93.909 197 9 2 2474 2668 461245165 461244970 8.660000e-76 294
4 TraesCS7D01G346000 chr7B 85.973 221 20 3 224 444 461249335 461249126 3.200000e-55 226
5 TraesCS7D01G346000 chr7A 92.810 1502 82 16 899 2383 495582548 495581056 0.000000e+00 2152
6 TraesCS7D01G346000 chr7A 83.700 454 68 5 2740 3187 495574759 495574306 1.060000e-114 424
7 TraesCS7D01G346000 chr7A 91.200 125 9 1 1 123 514143055 514142931 5.480000e-38 169
8 TraesCS7D01G346000 chr1A 93.407 182 10 2 459 639 581543894 581544074 5.250000e-68 268
9 TraesCS7D01G346000 chr4A 91.935 186 11 4 458 639 457823763 457823948 1.140000e-64 257
10 TraesCS7D01G346000 chr4A 93.277 119 6 1 1 117 741806918 741807036 1.180000e-39 174
11 TraesCS7D01G346000 chr3A 92.308 182 12 2 460 639 11688675 11688856 1.140000e-64 257
12 TraesCS7D01G346000 chr3A 92.308 182 12 2 460 639 11714010 11714191 1.140000e-64 257
13 TraesCS7D01G346000 chr3A 90.625 192 15 3 458 649 628192092 628191904 5.290000e-63 252
14 TraesCS7D01G346000 chr3A 91.304 184 12 4 459 638 16682235 16682418 6.840000e-62 248
15 TraesCS7D01G346000 chr6A 91.848 184 11 3 460 639 7988459 7988642 1.470000e-63 254
16 TraesCS7D01G346000 chr5D 89.320 206 14 6 440 639 488352524 488352321 5.290000e-63 252
17 TraesCS7D01G346000 chr5D 94.017 117 5 1 1 115 547634718 547634834 3.270000e-40 176
18 TraesCS7D01G346000 chr2A 91.803 183 11 2 460 638 55074911 55075093 5.290000e-63 252
19 TraesCS7D01G346000 chr2A 93.277 119 6 1 1 117 19180688 19180570 1.180000e-39 174
20 TraesCS7D01G346000 chr1D 94.017 117 5 1 1 115 220841876 220841760 3.270000e-40 176
21 TraesCS7D01G346000 chr1D 92.562 121 7 1 1 119 436709359 436709479 4.230000e-39 172
22 TraesCS7D01G346000 chr4D 93.277 119 6 1 1 117 63413182 63413064 1.180000e-39 174
23 TraesCS7D01G346000 chr4D 91.870 123 7 2 1 120 70946604 70946726 5.480000e-38 169
24 TraesCS7D01G346000 chr4D 91.870 123 7 2 1 120 340060161 340060039 5.480000e-38 169


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G346000 chr7D 444376928 444380120 3192 True 5897.0 5897 100.000 1 3193 1 chr7D.!!$R1 3192
1 TraesCS7D01G346000 chr7B 461244246 461249335 5089 True 821.5 2337 88.348 224 3193 4 chr7B.!!$R1 2969
2 TraesCS7D01G346000 chr7A 495581056 495582548 1492 True 2152.0 2152 92.810 899 2383 1 chr7A.!!$R2 1484

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
682 1778 0.249868 CGATCCAGCAAATAGGCGGA 60.25 55.0 0.0 0.0 39.5 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2377 3684 0.396435 TATGATGGGATGTCGTGGGC 59.604 55.0 0.0 0.0 0.0 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.875544 TTAATGAAGGCTCGCATGTTAC 57.124 40.909 3.90 0.00 0.00 2.50
23 24 1.668419 ATGAAGGCTCGCATGTTACC 58.332 50.000 2.44 0.00 0.00 2.85
24 25 0.323302 TGAAGGCTCGCATGTTACCA 59.677 50.000 0.00 0.00 0.00 3.25
25 26 1.065491 TGAAGGCTCGCATGTTACCAT 60.065 47.619 0.00 0.00 0.00 3.55
26 27 2.169561 TGAAGGCTCGCATGTTACCATA 59.830 45.455 0.00 0.00 0.00 2.74
27 28 2.240493 AGGCTCGCATGTTACCATAC 57.760 50.000 0.00 0.00 0.00 2.39
28 29 1.484653 AGGCTCGCATGTTACCATACA 59.515 47.619 0.00 0.00 0.00 2.29
29 30 2.104792 AGGCTCGCATGTTACCATACAT 59.895 45.455 0.00 0.00 39.27 2.29
30 31 3.323691 AGGCTCGCATGTTACCATACATA 59.676 43.478 0.00 0.00 36.64 2.29
31 32 4.020218 AGGCTCGCATGTTACCATACATAT 60.020 41.667 0.00 0.00 36.64 1.78
32 33 4.093408 GGCTCGCATGTTACCATACATATG 59.907 45.833 0.00 0.00 36.64 1.78
33 34 4.690748 GCTCGCATGTTACCATACATATGT 59.309 41.667 13.93 13.93 36.64 2.29
34 35 5.179368 GCTCGCATGTTACCATACATATGTT 59.821 40.000 14.77 0.00 36.64 2.71
35 36 6.367695 GCTCGCATGTTACCATACATATGTTA 59.632 38.462 14.77 0.00 36.64 2.41
36 37 7.621426 GCTCGCATGTTACCATACATATGTTAC 60.621 40.741 14.77 4.23 36.64 2.50
37 38 7.438564 TCGCATGTTACCATACATATGTTACT 58.561 34.615 14.77 0.00 36.64 2.24
38 39 8.578151 TCGCATGTTACCATACATATGTTACTA 58.422 33.333 14.77 0.00 36.64 1.82
39 40 8.644619 CGCATGTTACCATACATATGTTACTAC 58.355 37.037 14.77 6.19 36.64 2.73
40 41 8.932791 GCATGTTACCATACATATGTTACTACC 58.067 37.037 14.77 0.00 36.64 3.18
41 42 9.431887 CATGTTACCATACATATGTTACTACCC 57.568 37.037 14.77 0.00 36.64 3.69
42 43 8.550280 TGTTACCATACATATGTTACTACCCA 57.450 34.615 14.77 1.81 31.82 4.51
43 44 9.161572 TGTTACCATACATATGTTACTACCCAT 57.838 33.333 14.77 0.00 31.82 4.00
52 53 8.945193 ACATATGTTACTACCCATTATGAAGGT 58.055 33.333 1.41 0.00 37.69 3.50
63 64 8.792830 ACCCATTATGAAGGTAGTAACATAGA 57.207 34.615 0.00 0.00 30.13 1.98
64 65 8.648693 ACCCATTATGAAGGTAGTAACATAGAC 58.351 37.037 0.00 0.00 30.13 2.59
65 66 8.871125 CCCATTATGAAGGTAGTAACATAGACT 58.129 37.037 0.00 0.00 0.00 3.24
72 73 9.964354 TGAAGGTAGTAACATAGACTAGTAACA 57.036 33.333 0.00 0.00 30.08 2.41
108 109 8.680039 ACTAGTCTATTACTCACCACTATGAC 57.320 38.462 0.00 0.00 39.80 3.06
109 110 6.963083 AGTCTATTACTCACCACTATGACC 57.037 41.667 0.00 0.00 30.33 4.02
110 111 6.432581 AGTCTATTACTCACCACTATGACCA 58.567 40.000 0.00 0.00 30.33 4.02
111 112 6.547880 AGTCTATTACTCACCACTATGACCAG 59.452 42.308 0.00 0.00 30.33 4.00
112 113 3.887621 TTACTCACCACTATGACCAGC 57.112 47.619 0.00 0.00 0.00 4.85
113 114 0.905357 ACTCACCACTATGACCAGCC 59.095 55.000 0.00 0.00 0.00 4.85
114 115 1.198713 CTCACCACTATGACCAGCCT 58.801 55.000 0.00 0.00 0.00 4.58
115 116 2.292257 ACTCACCACTATGACCAGCCTA 60.292 50.000 0.00 0.00 0.00 3.93
116 117 2.766263 CTCACCACTATGACCAGCCTAA 59.234 50.000 0.00 0.00 0.00 2.69
117 118 2.500098 TCACCACTATGACCAGCCTAAC 59.500 50.000 0.00 0.00 0.00 2.34
118 119 2.236146 CACCACTATGACCAGCCTAACA 59.764 50.000 0.00 0.00 0.00 2.41
119 120 2.910319 ACCACTATGACCAGCCTAACAA 59.090 45.455 0.00 0.00 0.00 2.83
120 121 3.329520 ACCACTATGACCAGCCTAACAAA 59.670 43.478 0.00 0.00 0.00 2.83
121 122 4.202524 ACCACTATGACCAGCCTAACAAAA 60.203 41.667 0.00 0.00 0.00 2.44
122 123 4.949856 CCACTATGACCAGCCTAACAAAAT 59.050 41.667 0.00 0.00 0.00 1.82
123 124 5.418840 CCACTATGACCAGCCTAACAAAATT 59.581 40.000 0.00 0.00 0.00 1.82
124 125 6.071391 CCACTATGACCAGCCTAACAAAATTT 60.071 38.462 0.00 0.00 0.00 1.82
125 126 7.029563 CACTATGACCAGCCTAACAAAATTTC 58.970 38.462 0.00 0.00 0.00 2.17
126 127 6.948309 ACTATGACCAGCCTAACAAAATTTCT 59.052 34.615 0.00 0.00 0.00 2.52
127 128 6.670695 ATGACCAGCCTAACAAAATTTCTT 57.329 33.333 0.00 0.00 0.00 2.52
128 129 5.841810 TGACCAGCCTAACAAAATTTCTTG 58.158 37.500 0.00 0.00 0.00 3.02
129 130 4.631131 ACCAGCCTAACAAAATTTCTTGC 58.369 39.130 0.00 0.00 0.00 4.01
130 131 4.344968 ACCAGCCTAACAAAATTTCTTGCT 59.655 37.500 0.00 0.00 0.00 3.91
131 132 4.925646 CCAGCCTAACAAAATTTCTTGCTC 59.074 41.667 0.00 0.00 0.00 4.26
132 133 4.925646 CAGCCTAACAAAATTTCTTGCTCC 59.074 41.667 0.00 0.00 0.00 4.70
133 134 3.920412 GCCTAACAAAATTTCTTGCTCCG 59.080 43.478 0.00 0.00 0.00 4.63
134 135 4.558697 GCCTAACAAAATTTCTTGCTCCGT 60.559 41.667 0.00 0.00 0.00 4.69
135 136 5.528870 CCTAACAAAATTTCTTGCTCCGTT 58.471 37.500 0.00 0.00 0.00 4.44
136 137 5.629435 CCTAACAAAATTTCTTGCTCCGTTC 59.371 40.000 0.00 0.00 0.00 3.95
137 138 3.977427 ACAAAATTTCTTGCTCCGTTCC 58.023 40.909 0.00 0.00 0.00 3.62
138 139 3.636764 ACAAAATTTCTTGCTCCGTTCCT 59.363 39.130 0.00 0.00 0.00 3.36
139 140 3.923017 AAATTTCTTGCTCCGTTCCTG 57.077 42.857 0.00 0.00 0.00 3.86
140 141 2.859165 ATTTCTTGCTCCGTTCCTGA 57.141 45.000 0.00 0.00 0.00 3.86
141 142 2.859165 TTTCTTGCTCCGTTCCTGAT 57.141 45.000 0.00 0.00 0.00 2.90
142 143 2.859165 TTCTTGCTCCGTTCCTGATT 57.141 45.000 0.00 0.00 0.00 2.57
143 144 2.859165 TCTTGCTCCGTTCCTGATTT 57.141 45.000 0.00 0.00 0.00 2.17
144 145 3.140325 TCTTGCTCCGTTCCTGATTTT 57.860 42.857 0.00 0.00 0.00 1.82
145 146 4.280436 TCTTGCTCCGTTCCTGATTTTA 57.720 40.909 0.00 0.00 0.00 1.52
146 147 4.647611 TCTTGCTCCGTTCCTGATTTTAA 58.352 39.130 0.00 0.00 0.00 1.52
147 148 4.454504 TCTTGCTCCGTTCCTGATTTTAAC 59.545 41.667 0.00 0.00 0.00 2.01
148 149 3.745799 TGCTCCGTTCCTGATTTTAACA 58.254 40.909 0.00 0.00 0.00 2.41
149 150 3.500680 TGCTCCGTTCCTGATTTTAACAC 59.499 43.478 0.00 0.00 0.00 3.32
150 151 3.119955 GCTCCGTTCCTGATTTTAACACC 60.120 47.826 0.00 0.00 0.00 4.16
151 152 3.414269 TCCGTTCCTGATTTTAACACCC 58.586 45.455 0.00 0.00 0.00 4.61
152 153 3.073356 TCCGTTCCTGATTTTAACACCCT 59.927 43.478 0.00 0.00 0.00 4.34
153 154 3.439129 CCGTTCCTGATTTTAACACCCTC 59.561 47.826 0.00 0.00 0.00 4.30
154 155 4.069304 CGTTCCTGATTTTAACACCCTCA 58.931 43.478 0.00 0.00 0.00 3.86
155 156 4.700213 CGTTCCTGATTTTAACACCCTCAT 59.300 41.667 0.00 0.00 0.00 2.90
156 157 5.183140 CGTTCCTGATTTTAACACCCTCATT 59.817 40.000 0.00 0.00 0.00 2.57
157 158 6.294508 CGTTCCTGATTTTAACACCCTCATTT 60.295 38.462 0.00 0.00 0.00 2.32
158 159 7.094549 CGTTCCTGATTTTAACACCCTCATTTA 60.095 37.037 0.00 0.00 0.00 1.40
159 160 8.581578 GTTCCTGATTTTAACACCCTCATTTAA 58.418 33.333 0.00 0.00 0.00 1.52
160 161 8.117813 TCCTGATTTTAACACCCTCATTTAAC 57.882 34.615 0.00 0.00 0.00 2.01
161 162 7.726291 TCCTGATTTTAACACCCTCATTTAACA 59.274 33.333 0.00 0.00 0.00 2.41
162 163 8.364142 CCTGATTTTAACACCCTCATTTAACAA 58.636 33.333 0.00 0.00 0.00 2.83
163 164 9.757227 CTGATTTTAACACCCTCATTTAACAAA 57.243 29.630 0.00 0.00 0.00 2.83
164 165 9.535878 TGATTTTAACACCCTCATTTAACAAAC 57.464 29.630 0.00 0.00 0.00 2.93
165 166 9.758651 GATTTTAACACCCTCATTTAACAAACT 57.241 29.630 0.00 0.00 0.00 2.66
169 170 7.648039 AACACCCTCATTTAACAAACTAACA 57.352 32.000 0.00 0.00 0.00 2.41
170 171 7.272037 ACACCCTCATTTAACAAACTAACAG 57.728 36.000 0.00 0.00 0.00 3.16
171 172 7.057894 ACACCCTCATTTAACAAACTAACAGA 58.942 34.615 0.00 0.00 0.00 3.41
172 173 7.012989 ACACCCTCATTTAACAAACTAACAGAC 59.987 37.037 0.00 0.00 0.00 3.51
173 174 7.012894 CACCCTCATTTAACAAACTAACAGACA 59.987 37.037 0.00 0.00 0.00 3.41
174 175 7.558444 ACCCTCATTTAACAAACTAACAGACAA 59.442 33.333 0.00 0.00 0.00 3.18
175 176 8.410141 CCCTCATTTAACAAACTAACAGACAAA 58.590 33.333 0.00 0.00 0.00 2.83
176 177 9.796120 CCTCATTTAACAAACTAACAGACAAAA 57.204 29.630 0.00 0.00 0.00 2.44
194 195 8.424274 AGACAAAAATCTGAATTGTTGAAACC 57.576 30.769 7.81 0.00 41.01 3.27
195 196 8.260114 AGACAAAAATCTGAATTGTTGAAACCT 58.740 29.630 7.81 0.00 41.01 3.50
196 197 9.528018 GACAAAAATCTGAATTGTTGAAACCTA 57.472 29.630 7.81 0.00 41.01 3.08
197 198 9.883142 ACAAAAATCTGAATTGTTGAAACCTAA 57.117 25.926 7.81 0.00 41.01 2.69
201 202 9.696917 AAATCTGAATTGTTGAAACCTAATGAC 57.303 29.630 0.00 0.00 0.00 3.06
202 203 7.214467 TCTGAATTGTTGAAACCTAATGACC 57.786 36.000 0.00 0.00 0.00 4.02
203 204 7.004086 TCTGAATTGTTGAAACCTAATGACCT 58.996 34.615 0.00 0.00 0.00 3.85
204 205 8.160765 TCTGAATTGTTGAAACCTAATGACCTA 58.839 33.333 0.00 0.00 0.00 3.08
205 206 8.698973 TGAATTGTTGAAACCTAATGACCTAA 57.301 30.769 0.00 0.00 0.00 2.69
206 207 8.792633 TGAATTGTTGAAACCTAATGACCTAAG 58.207 33.333 0.00 0.00 0.00 2.18
207 208 7.703058 ATTGTTGAAACCTAATGACCTAAGG 57.297 36.000 0.00 0.00 36.42 2.69
208 209 5.566469 TGTTGAAACCTAATGACCTAAGGG 58.434 41.667 0.00 0.00 34.52 3.95
209 210 4.230745 TGAAACCTAATGACCTAAGGGC 57.769 45.455 0.00 0.00 34.52 5.19
210 211 3.053917 TGAAACCTAATGACCTAAGGGCC 60.054 47.826 0.00 0.00 34.52 5.80
211 212 2.588925 ACCTAATGACCTAAGGGCCT 57.411 50.000 0.00 0.00 34.52 5.19
212 213 2.859951 ACCTAATGACCTAAGGGCCTT 58.140 47.619 24.44 24.44 34.52 4.35
213 214 2.778270 ACCTAATGACCTAAGGGCCTTC 59.222 50.000 24.77 9.29 34.52 3.46
214 215 2.106684 CCTAATGACCTAAGGGCCTTCC 59.893 54.545 24.77 11.18 35.63 3.46
215 216 0.546598 AATGACCTAAGGGCCTTCCG 59.453 55.000 24.77 16.22 41.52 4.30
216 217 0.326238 ATGACCTAAGGGCCTTCCGA 60.326 55.000 24.77 4.25 41.52 4.55
217 218 0.545787 TGACCTAAGGGCCTTCCGAA 60.546 55.000 24.77 3.82 41.52 4.30
218 219 0.616891 GACCTAAGGGCCTTCCGAAA 59.383 55.000 24.77 3.38 41.52 3.46
219 220 0.618981 ACCTAAGGGCCTTCCGAAAG 59.381 55.000 24.77 14.10 41.52 2.62
220 221 0.909623 CCTAAGGGCCTTCCGAAAGA 59.090 55.000 24.77 1.67 41.52 2.52
221 222 1.280998 CCTAAGGGCCTTCCGAAAGAA 59.719 52.381 24.77 0.81 41.52 2.52
222 223 5.205857 ACCTAAGGGCCTTCCGAAAGAAG 62.206 52.174 24.77 11.75 42.77 2.85
250 251 8.996271 GCTATTACCCCACATAATTTACACTAC 58.004 37.037 0.00 0.00 0.00 2.73
269 270 6.157211 CACTACGAAGAGATAACACAACCTT 58.843 40.000 0.00 0.00 0.00 3.50
331 332 7.781324 AAACCATCCAGACTTGACAATTTAT 57.219 32.000 0.00 0.00 0.00 1.40
336 337 8.616076 CCATCCAGACTTGACAATTTATTACTC 58.384 37.037 0.00 0.00 0.00 2.59
342 343 8.606830 AGACTTGACAATTTATTACTCCCTCTT 58.393 33.333 0.00 0.00 0.00 2.85
362 363 7.764443 CCCTCTTTTCTAAAATACTCGTCATGA 59.236 37.037 0.00 0.00 0.00 3.07
363 364 9.319143 CCTCTTTTCTAAAATACTCGTCATGAT 57.681 33.333 0.00 0.00 0.00 2.45
404 405 2.215191 TGCATCGGAGAAGGCAGAT 58.785 52.632 0.00 0.00 43.93 2.90
412 413 1.065564 GGAGAAGGCAGATGTCTTGCT 60.066 52.381 4.06 2.04 40.54 3.91
416 417 0.990374 AGGCAGATGTCTTGCTTCCT 59.010 50.000 0.00 0.00 0.00 3.36
426 427 5.689383 TGTCTTGCTTCCTATTGTTGAAC 57.311 39.130 0.00 0.00 0.00 3.18
433 434 5.351465 TGCTTCCTATTGTTGAACGAAGATC 59.649 40.000 12.12 0.00 30.58 2.75
434 435 5.500931 GCTTCCTATTGTTGAACGAAGATCG 60.501 44.000 12.12 0.00 46.93 3.69
436 437 3.001330 CCTATTGTTGAACGAAGATCGGC 59.999 47.826 4.66 0.00 45.59 5.54
444 445 1.717194 ACGAAGATCGGCGCTTAAAA 58.283 45.000 7.64 0.00 45.59 1.52
445 446 2.277084 ACGAAGATCGGCGCTTAAAAT 58.723 42.857 7.64 0.00 45.59 1.82
446 447 2.284417 ACGAAGATCGGCGCTTAAAATC 59.716 45.455 7.64 0.00 45.59 2.17
448 449 3.242284 CGAAGATCGGCGCTTAAAATCAA 60.242 43.478 7.64 0.00 36.00 2.57
449 450 3.951979 AGATCGGCGCTTAAAATCAAG 57.048 42.857 7.64 0.00 0.00 3.02
453 454 1.737793 CGGCGCTTAAAATCAAGGACT 59.262 47.619 7.64 0.00 0.00 3.85
454 455 2.161609 CGGCGCTTAAAATCAAGGACTT 59.838 45.455 7.64 0.00 0.00 3.01
455 456 3.372822 CGGCGCTTAAAATCAAGGACTTA 59.627 43.478 7.64 0.00 0.00 2.24
456 457 4.494199 CGGCGCTTAAAATCAAGGACTTAG 60.494 45.833 7.64 0.00 0.00 2.18
458 459 5.123344 GGCGCTTAAAATCAAGGACTTAGAA 59.877 40.000 7.64 0.00 0.00 2.10
460 461 6.348213 GCGCTTAAAATCAAGGACTTAGAACA 60.348 38.462 0.00 0.00 0.00 3.18
462 463 7.095187 CGCTTAAAATCAAGGACTTAGAACAGT 60.095 37.037 0.00 0.00 0.00 3.55
499 1595 6.590292 ACATATAGATGTGCCGTAAGTATTGC 59.410 38.462 1.31 0.00 44.90 3.56
500 1596 3.260475 AGATGTGCCGTAAGTATTGCA 57.740 42.857 0.00 0.00 0.00 4.08
505 1601 3.260475 TGCCGTAAGTATTGCACATCT 57.740 42.857 0.00 0.00 0.00 2.90
506 1602 4.394439 TGCCGTAAGTATTGCACATCTA 57.606 40.909 0.00 0.00 0.00 1.98
507 1603 4.760878 TGCCGTAAGTATTGCACATCTAA 58.239 39.130 0.00 0.00 0.00 2.10
508 1604 4.808895 TGCCGTAAGTATTGCACATCTAAG 59.191 41.667 0.00 0.00 0.00 2.18
509 1605 4.809426 GCCGTAAGTATTGCACATCTAAGT 59.191 41.667 0.00 0.00 0.00 2.24
510 1606 5.050972 GCCGTAAGTATTGCACATCTAAGTC 60.051 44.000 0.00 0.00 0.00 3.01
511 1607 5.462398 CCGTAAGTATTGCACATCTAAGTCC 59.538 44.000 0.00 0.00 0.00 3.85
512 1608 6.273825 CGTAAGTATTGCACATCTAAGTCCT 58.726 40.000 0.00 0.00 0.00 3.85
513 1609 7.423199 CGTAAGTATTGCACATCTAAGTCCTA 58.577 38.462 0.00 0.00 0.00 2.94
514 1610 8.082852 CGTAAGTATTGCACATCTAAGTCCTAT 58.917 37.037 0.00 0.00 0.00 2.57
515 1611 9.197694 GTAAGTATTGCACATCTAAGTCCTATG 57.802 37.037 0.00 0.00 0.00 2.23
516 1612 7.603180 AGTATTGCACATCTAAGTCCTATGA 57.397 36.000 0.00 0.00 0.00 2.15
517 1613 7.437748 AGTATTGCACATCTAAGTCCTATGAC 58.562 38.462 0.00 0.00 42.09 3.06
518 1614 5.675684 TTGCACATCTAAGTCCTATGACA 57.324 39.130 0.81 0.00 44.33 3.58
519 1615 5.876651 TGCACATCTAAGTCCTATGACAT 57.123 39.130 0.81 0.00 44.33 3.06
520 1616 6.239217 TGCACATCTAAGTCCTATGACATT 57.761 37.500 0.00 0.00 44.33 2.71
521 1617 6.051074 TGCACATCTAAGTCCTATGACATTG 58.949 40.000 0.00 0.00 44.33 2.82
522 1618 6.127083 TGCACATCTAAGTCCTATGACATTGA 60.127 38.462 0.00 0.00 44.33 2.57
523 1619 6.933521 GCACATCTAAGTCCTATGACATTGAT 59.066 38.462 0.00 0.00 44.33 2.57
524 1620 7.117523 GCACATCTAAGTCCTATGACATTGATC 59.882 40.741 0.00 0.00 44.33 2.92
525 1621 8.366401 CACATCTAAGTCCTATGACATTGATCT 58.634 37.037 0.00 0.00 44.33 2.75
526 1622 8.932610 ACATCTAAGTCCTATGACATTGATCTT 58.067 33.333 0.00 3.11 44.33 2.40
529 1625 8.568794 TCTAAGTCCTATGACATTGATCTTACG 58.431 37.037 0.00 0.00 44.33 3.18
530 1626 6.716934 AGTCCTATGACATTGATCTTACGT 57.283 37.500 0.00 0.00 44.33 3.57
531 1627 7.113658 AGTCCTATGACATTGATCTTACGTT 57.886 36.000 0.00 0.00 44.33 3.99
532 1628 6.980978 AGTCCTATGACATTGATCTTACGTTG 59.019 38.462 0.00 0.00 44.33 4.10
533 1629 6.978659 GTCCTATGACATTGATCTTACGTTGA 59.021 38.462 0.00 0.00 41.37 3.18
534 1630 7.168302 GTCCTATGACATTGATCTTACGTTGAG 59.832 40.741 0.00 0.00 41.37 3.02
535 1631 7.068226 TCCTATGACATTGATCTTACGTTGAGA 59.932 37.037 0.00 0.00 0.00 3.27
536 1632 7.869937 CCTATGACATTGATCTTACGTTGAGAT 59.130 37.037 12.34 12.34 36.60 2.75
537 1633 9.254133 CTATGACATTGATCTTACGTTGAGATT 57.746 33.333 13.35 0.71 34.13 2.40
538 1634 7.525688 TGACATTGATCTTACGTTGAGATTC 57.474 36.000 13.35 8.54 34.13 2.52
539 1635 6.253512 TGACATTGATCTTACGTTGAGATTCG 59.746 38.462 13.35 7.05 34.13 3.34
540 1636 6.100004 ACATTGATCTTACGTTGAGATTCGT 58.900 36.000 13.35 7.50 42.82 3.85
541 1637 6.035005 ACATTGATCTTACGTTGAGATTCGTG 59.965 38.462 13.35 13.30 40.50 4.35
542 1638 5.055642 TGATCTTACGTTGAGATTCGTGT 57.944 39.130 13.35 0.00 40.50 4.49
543 1639 4.857037 TGATCTTACGTTGAGATTCGTGTG 59.143 41.667 13.35 0.00 40.50 3.82
544 1640 3.571571 TCTTACGTTGAGATTCGTGTGG 58.428 45.455 0.00 0.00 40.50 4.17
545 1641 3.253921 TCTTACGTTGAGATTCGTGTGGA 59.746 43.478 0.00 0.00 40.50 4.02
546 1642 2.743636 ACGTTGAGATTCGTGTGGAT 57.256 45.000 0.00 0.00 38.85 3.41
547 1643 3.861276 ACGTTGAGATTCGTGTGGATA 57.139 42.857 0.00 0.00 38.85 2.59
548 1644 4.386867 ACGTTGAGATTCGTGTGGATAT 57.613 40.909 0.00 0.00 38.85 1.63
549 1645 4.755411 ACGTTGAGATTCGTGTGGATATT 58.245 39.130 0.00 0.00 38.85 1.28
550 1646 5.175859 ACGTTGAGATTCGTGTGGATATTT 58.824 37.500 0.00 0.00 38.85 1.40
551 1647 5.642063 ACGTTGAGATTCGTGTGGATATTTT 59.358 36.000 0.00 0.00 38.85 1.82
552 1648 6.183360 ACGTTGAGATTCGTGTGGATATTTTC 60.183 38.462 0.00 0.00 38.85 2.29
553 1649 6.036083 CGTTGAGATTCGTGTGGATATTTTCT 59.964 38.462 0.00 0.00 0.00 2.52
554 1650 7.413000 CGTTGAGATTCGTGTGGATATTTTCTT 60.413 37.037 0.00 0.00 0.00 2.52
555 1651 7.921786 TGAGATTCGTGTGGATATTTTCTTT 57.078 32.000 0.00 0.00 0.00 2.52
556 1652 8.335532 TGAGATTCGTGTGGATATTTTCTTTT 57.664 30.769 0.00 0.00 0.00 2.27
557 1653 8.792633 TGAGATTCGTGTGGATATTTTCTTTTT 58.207 29.630 0.00 0.00 0.00 1.94
598 1694 6.611613 ACTTGATTCACTCACTTAGATGGA 57.388 37.500 0.00 0.00 32.17 3.41
599 1695 6.402222 ACTTGATTCACTCACTTAGATGGAC 58.598 40.000 0.00 0.00 32.17 4.02
600 1696 6.014242 ACTTGATTCACTCACTTAGATGGACA 60.014 38.462 0.00 0.00 32.17 4.02
601 1697 6.358974 TGATTCACTCACTTAGATGGACAA 57.641 37.500 0.00 0.00 0.00 3.18
602 1698 6.950842 TGATTCACTCACTTAGATGGACAAT 58.049 36.000 0.00 0.00 0.00 2.71
603 1699 8.078060 TGATTCACTCACTTAGATGGACAATA 57.922 34.615 0.00 0.00 0.00 1.90
604 1700 8.539544 TGATTCACTCACTTAGATGGACAATAA 58.460 33.333 0.00 0.00 0.00 1.40
605 1701 8.723942 ATTCACTCACTTAGATGGACAATAAC 57.276 34.615 0.00 0.00 0.00 1.89
606 1702 7.482169 TCACTCACTTAGATGGACAATAACT 57.518 36.000 0.00 0.00 0.00 2.24
607 1703 8.589701 TCACTCACTTAGATGGACAATAACTA 57.410 34.615 0.00 0.00 0.00 2.24
608 1704 8.687242 TCACTCACTTAGATGGACAATAACTAG 58.313 37.037 0.00 0.00 0.00 2.57
609 1705 8.687242 CACTCACTTAGATGGACAATAACTAGA 58.313 37.037 0.00 0.00 0.00 2.43
610 1706 8.908903 ACTCACTTAGATGGACAATAACTAGAG 58.091 37.037 0.00 0.00 0.00 2.43
611 1707 7.717568 TCACTTAGATGGACAATAACTAGAGC 58.282 38.462 0.00 0.00 0.00 4.09
612 1708 7.342026 TCACTTAGATGGACAATAACTAGAGCA 59.658 37.037 0.00 0.00 0.00 4.26
613 1709 7.436673 CACTTAGATGGACAATAACTAGAGCAC 59.563 40.741 0.00 0.00 0.00 4.40
614 1710 5.939764 AGATGGACAATAACTAGAGCACA 57.060 39.130 0.00 0.00 0.00 4.57
615 1711 6.491714 AGATGGACAATAACTAGAGCACAT 57.508 37.500 0.00 0.00 0.00 3.21
616 1712 6.893583 AGATGGACAATAACTAGAGCACATT 58.106 36.000 0.00 0.00 0.00 2.71
617 1713 7.341805 AGATGGACAATAACTAGAGCACATTT 58.658 34.615 0.00 0.00 0.00 2.32
618 1714 8.486210 AGATGGACAATAACTAGAGCACATTTA 58.514 33.333 0.00 0.00 0.00 1.40
619 1715 8.668510 ATGGACAATAACTAGAGCACATTTAG 57.331 34.615 0.00 0.00 0.00 1.85
620 1716 7.847096 TGGACAATAACTAGAGCACATTTAGA 58.153 34.615 0.00 0.00 0.00 2.10
621 1717 8.486210 TGGACAATAACTAGAGCACATTTAGAT 58.514 33.333 0.00 0.00 0.00 1.98
622 1718 8.768955 GGACAATAACTAGAGCACATTTAGATG 58.231 37.037 0.00 0.00 39.25 2.90
626 1722 9.765795 AATAACTAGAGCACATTTAGATGTACC 57.234 33.333 0.00 0.00 44.55 3.34
627 1723 6.163135 ACTAGAGCACATTTAGATGTACCC 57.837 41.667 0.00 0.00 44.55 3.69
628 1724 5.900123 ACTAGAGCACATTTAGATGTACCCT 59.100 40.000 0.00 0.00 44.55 4.34
629 1725 7.067421 ACTAGAGCACATTTAGATGTACCCTA 58.933 38.462 0.00 0.00 44.55 3.53
630 1726 6.412362 AGAGCACATTTAGATGTACCCTAG 57.588 41.667 0.00 0.00 44.55 3.02
631 1727 6.136857 AGAGCACATTTAGATGTACCCTAGA 58.863 40.000 0.00 0.00 44.55 2.43
632 1728 6.041069 AGAGCACATTTAGATGTACCCTAGAC 59.959 42.308 0.00 0.00 44.55 2.59
633 1729 5.661312 AGCACATTTAGATGTACCCTAGACA 59.339 40.000 0.00 0.00 44.55 3.41
634 1730 5.753921 GCACATTTAGATGTACCCTAGACAC 59.246 44.000 0.00 0.00 44.55 3.67
635 1731 6.629515 GCACATTTAGATGTACCCTAGACACA 60.630 42.308 0.00 0.00 44.55 3.72
636 1732 6.757010 CACATTTAGATGTACCCTAGACACAC 59.243 42.308 0.00 0.00 44.55 3.82
637 1733 5.927281 TTTAGATGTACCCTAGACACACC 57.073 43.478 0.00 0.00 0.00 4.16
638 1734 2.748388 AGATGTACCCTAGACACACCC 58.252 52.381 0.00 0.00 0.00 4.61
657 1753 7.021196 CACACCCGACTTAGAAATACAAAATG 58.979 38.462 0.00 0.00 0.00 2.32
670 1766 6.668541 AATACAAAATGTCAGTCGATCCAG 57.331 37.500 0.00 0.00 0.00 3.86
682 1778 0.249868 CGATCCAGCAAATAGGCGGA 60.250 55.000 0.00 0.00 39.50 5.54
708 1804 8.737168 TCCTCACACCTTGATCAATATTTAAG 57.263 34.615 8.96 3.67 32.17 1.85
817 2067 6.488769 TCTTGACTTACAGTTAAAGGGTGA 57.511 37.500 0.00 0.00 0.00 4.02
840 2090 9.788960 GTGATTTAGTCTAATTTCATCCAAACC 57.211 33.333 8.30 0.00 0.00 3.27
848 2098 7.175990 GTCTAATTTCATCCAAACCAGGTTACA 59.824 37.037 4.87 0.00 0.00 2.41
863 2113 7.345691 ACCAGGTTACATTGACATGATGATAA 58.654 34.615 0.00 0.00 34.11 1.75
883 2133 8.642908 TGATAATCATTACAGAACTTACACGG 57.357 34.615 0.00 0.00 0.00 4.94
884 2134 5.796350 AATCATTACAGAACTTACACGGC 57.204 39.130 0.00 0.00 0.00 5.68
885 2135 4.260139 TCATTACAGAACTTACACGGCA 57.740 40.909 0.00 0.00 0.00 5.69
886 2136 4.633175 TCATTACAGAACTTACACGGCAA 58.367 39.130 0.00 0.00 0.00 4.52
887 2137 5.242434 TCATTACAGAACTTACACGGCAAT 58.758 37.500 0.00 0.00 0.00 3.56
888 2138 5.703592 TCATTACAGAACTTACACGGCAATT 59.296 36.000 0.00 0.00 0.00 2.32
889 2139 6.205853 TCATTACAGAACTTACACGGCAATTT 59.794 34.615 0.00 0.00 0.00 1.82
890 2140 4.223320 ACAGAACTTACACGGCAATTTG 57.777 40.909 0.00 0.00 0.00 2.32
891 2141 2.979813 CAGAACTTACACGGCAATTTGC 59.020 45.455 13.04 13.04 44.08 3.68
892 2142 2.884639 AGAACTTACACGGCAATTTGCT 59.115 40.909 20.06 3.87 44.28 3.91
907 2157 4.929146 ATTTGCTGGTCTAACCCTAGTT 57.071 40.909 0.00 0.00 37.50 2.24
1074 2337 4.631740 TGCCTCTCCCCGACCACA 62.632 66.667 0.00 0.00 0.00 4.17
1491 2757 1.078426 CTTCCGGCGGTCCTTTGAT 60.078 57.895 27.32 0.00 0.00 2.57
1666 2945 0.991355 AGGTGGACAACTTGGGGACA 60.991 55.000 0.00 0.00 39.83 4.02
1672 2951 1.947456 GACAACTTGGGGACAGTGAAC 59.053 52.381 0.00 0.00 44.54 3.18
1858 3137 6.159575 TCAGGGGATCAGGAATAAATTACACA 59.840 38.462 0.00 0.00 0.00 3.72
1934 3213 1.141858 AGCCAGAGGTAAGCAATAGCC 59.858 52.381 0.00 0.00 43.56 3.93
1939 3218 0.179045 AGGTAAGCAATAGCCCGCAG 60.179 55.000 0.00 0.00 43.56 5.18
1941 3220 1.663695 GTAAGCAATAGCCCGCAGAA 58.336 50.000 0.00 0.00 43.56 3.02
1948 3227 3.209410 CAATAGCCCGCAGAATTCTTCT 58.791 45.455 4.86 1.25 41.70 2.85
1962 3241 2.496899 TCTTCTCCATGGAACCTTGC 57.503 50.000 17.00 0.00 0.00 4.01
1964 3243 2.026822 TCTTCTCCATGGAACCTTGCTC 60.027 50.000 17.00 0.00 0.00 4.26
1988 3291 5.072040 TCGAGAGATTGTTGCTCATACAA 57.928 39.130 0.00 0.00 39.58 2.41
2126 3430 2.286872 TCCTACAAGGTCGTCGAGATC 58.713 52.381 0.00 0.00 36.53 2.75
2249 3553 2.882793 GCCTAATACGGCGTCAGTC 58.117 57.895 19.21 0.00 40.79 3.51
2264 3569 3.370978 CGTCAGTCAAGTGTGTTGTTCTT 59.629 43.478 0.00 0.00 0.00 2.52
2265 3570 4.492570 CGTCAGTCAAGTGTGTTGTTCTTC 60.493 45.833 0.00 0.00 0.00 2.87
2266 3571 4.631813 GTCAGTCAAGTGTGTTGTTCTTCT 59.368 41.667 0.00 0.00 0.00 2.85
2273 3578 5.485662 AGTGTGTTGTTCTTCTAACTTGC 57.514 39.130 0.00 0.00 0.00 4.01
2292 3597 3.937814 TGCAAGTCGTGGTTCATCTATT 58.062 40.909 0.00 0.00 0.00 1.73
2317 3623 8.712285 TGAATTCAGAAGTATAAAACCTACCG 57.288 34.615 3.38 0.00 0.00 4.02
2324 3630 6.587608 AGAAGTATAAAACCTACCGTGTTTCG 59.412 38.462 0.00 0.00 34.97 3.46
2355 3662 4.453751 ACTTCTTGCCGTAAAAACCTACA 58.546 39.130 0.00 0.00 0.00 2.74
2395 3702 1.149174 GCCCACGACATCCCATCAT 59.851 57.895 0.00 0.00 0.00 2.45
2405 4207 5.936372 ACGACATCCCATCATATTCATTCAG 59.064 40.000 0.00 0.00 0.00 3.02
2412 4214 4.992951 CCATCATATTCATTCAGTGCTCGA 59.007 41.667 0.00 0.00 0.00 4.04
2415 4217 1.645034 ATTCATTCAGTGCTCGACCG 58.355 50.000 0.00 0.00 0.00 4.79
2440 4242 2.545731 GTTGGAAATTGGTTGCACGTT 58.454 42.857 0.00 0.00 37.28 3.99
2441 4243 2.215907 TGGAAATTGGTTGCACGTTG 57.784 45.000 0.00 0.00 31.74 4.10
2442 4244 1.202463 TGGAAATTGGTTGCACGTTGG 60.202 47.619 0.00 0.00 31.74 3.77
2443 4245 1.067821 GGAAATTGGTTGCACGTTGGA 59.932 47.619 0.00 0.00 0.00 3.53
2444 4246 2.482142 GGAAATTGGTTGCACGTTGGAA 60.482 45.455 0.00 0.00 0.00 3.53
2448 4250 4.592485 ATTGGTTGCACGTTGGAAAATA 57.408 36.364 0.00 0.00 26.96 1.40
2449 4251 4.386867 TTGGTTGCACGTTGGAAAATAA 57.613 36.364 0.00 0.00 26.96 1.40
2450 4252 4.386867 TGGTTGCACGTTGGAAAATAAA 57.613 36.364 0.00 0.00 26.96 1.40
2451 4253 4.755411 TGGTTGCACGTTGGAAAATAAAA 58.245 34.783 0.00 0.00 26.96 1.52
2452 4254 5.175859 TGGTTGCACGTTGGAAAATAAAAA 58.824 33.333 0.00 0.00 26.96 1.94
2516 4642 5.936686 AGAGTGTTGTGTCATCTTGAATG 57.063 39.130 0.00 0.00 0.00 2.67
2541 4667 5.391203 CCACCACATGATTGCACGATATATG 60.391 44.000 0.00 0.00 0.00 1.78
2588 4714 5.278964 GGAGTTGACGAAACAATTCCTAC 57.721 43.478 19.41 4.42 46.19 3.18
2591 4717 5.051816 AGTTGACGAAACAATTCCTACGAA 58.948 37.500 8.13 0.00 41.61 3.85
2662 4790 4.702247 TCTACGAATCAAACAACACACG 57.298 40.909 0.00 0.00 0.00 4.49
2665 4984 4.186241 ACGAATCAAACAACACACGTAC 57.814 40.909 0.00 0.00 0.00 3.67
2680 4999 2.538449 CACGTACAATATCTTGGGCGAC 59.462 50.000 13.24 0.00 37.20 5.19
2682 5001 1.525619 GTACAATATCTTGGGCGACGC 59.474 52.381 12.43 12.43 36.64 5.19
2685 5004 1.261619 CAATATCTTGGGCGACGCTTC 59.738 52.381 20.77 12.81 0.00 3.86
2709 5028 0.179045 CCGTCAGATCAACCCCCATC 60.179 60.000 0.00 0.00 0.00 3.51
2726 5045 1.358725 ATCGAATGTCCGCAACACCG 61.359 55.000 0.00 6.54 41.75 4.94
2732 5051 0.533032 TGTCCGCAACACCGATGATA 59.467 50.000 0.00 0.00 31.20 2.15
2738 5057 2.348498 CGCAACACCGATGATATTTCCG 60.348 50.000 0.00 0.00 0.00 4.30
2765 5102 0.893270 CCCTCATTTCACAACGGCCA 60.893 55.000 2.24 0.00 0.00 5.36
2800 5137 1.066908 CTGCAACACCGGTGATGTTTT 59.933 47.619 40.21 21.02 38.22 2.43
2801 5138 1.066303 TGCAACACCGGTGATGTTTTC 59.934 47.619 40.21 24.05 38.22 2.29
2802 5139 1.066303 GCAACACCGGTGATGTTTTCA 59.934 47.619 40.21 0.00 38.22 2.69
2810 5147 3.740321 CCGGTGATGTTTTCAAAACATGG 59.260 43.478 29.17 20.43 40.62 3.66
2815 5152 3.742433 TGTTTTCAAAACATGGGCGAT 57.258 38.095 11.83 0.00 0.00 4.58
2822 5159 4.093966 ACATGGGCGATGTTGCAA 57.906 50.000 9.51 0.00 43.20 4.08
2823 5160 2.582272 ACATGGGCGATGTTGCAAT 58.418 47.368 9.51 0.00 43.20 3.56
2826 5163 1.727511 ATGGGCGATGTTGCAATCCG 61.728 55.000 0.59 8.03 36.28 4.18
2830 5167 2.460275 CGATGTTGCAATCCGGCGA 61.460 57.895 9.30 0.00 36.28 5.54
2833 5170 2.746277 GTTGCAATCCGGCGACCT 60.746 61.111 9.30 0.00 41.42 3.85
2859 5196 2.665185 AGCGCCTTCACAACCGAC 60.665 61.111 2.29 0.00 0.00 4.79
2868 5205 1.504359 TCACAACCGACGATGTTTCC 58.496 50.000 0.00 0.00 0.00 3.13
2884 5221 3.181482 TGTTTCCGCAACAATTGACATGT 60.181 39.130 13.59 0.00 42.76 3.21
2886 5223 4.837896 TTCCGCAACAATTGACATGTTA 57.162 36.364 13.59 0.00 38.90 2.41
2891 5229 5.332959 CCGCAACAATTGACATGTTAAAACC 60.333 40.000 13.59 0.00 38.90 3.27
2897 5235 4.991153 TTGACATGTTAAAACCAGTGCA 57.009 36.364 0.00 0.00 0.00 4.57
2900 5238 3.027412 ACATGTTAAAACCAGTGCACCA 58.973 40.909 14.63 0.64 0.00 4.17
2906 5244 5.127194 TGTTAAAACCAGTGCACCAAACATA 59.873 36.000 14.63 0.00 0.00 2.29
2927 5265 7.526608 ACATACATGTTTTCGAAACATACTGG 58.473 34.615 10.79 8.10 38.69 4.00
2932 5270 7.227910 ACATGTTTTCGAAACATACTGGTAGTT 59.772 33.333 10.79 0.00 38.69 2.24
2934 5272 6.762187 TGTTTTCGAAACATACTGGTAGTTGA 59.238 34.615 10.79 0.00 0.00 3.18
2940 5278 7.117236 TCGAAACATACTGGTAGTTGAAACATC 59.883 37.037 0.00 0.00 0.00 3.06
2942 5280 7.435068 AACATACTGGTAGTTGAAACATCAC 57.565 36.000 0.00 0.00 0.00 3.06
2987 5326 2.047274 CACACAGCACCCCGGTAG 60.047 66.667 0.00 0.00 0.00 3.18
2988 5327 4.016706 ACACAGCACCCCGGTAGC 62.017 66.667 0.00 0.49 0.00 3.58
3012 5351 1.599518 TTGTAGCACAAGGCCACGG 60.600 57.895 5.01 0.00 46.50 4.94
3035 5375 3.131478 CCCCTTTTGTAGCGGCGG 61.131 66.667 9.78 0.00 0.00 6.13
3083 5423 4.389576 GCCTTGAAGCGGCACACG 62.390 66.667 1.45 0.00 46.77 4.49
3105 5445 1.341606 CTTCCGACGACAAGAGCTTC 58.658 55.000 0.00 0.00 0.00 3.86
3108 5448 1.081376 CGACGACAAGAGCTTCGGT 60.081 57.895 10.09 0.00 39.63 4.69
3114 5454 4.394712 AAGAGCTTCGGTGGGCGG 62.395 66.667 0.00 0.00 0.00 6.13
3131 5471 4.910585 GCGGGCGGTACCTCCATG 62.911 72.222 22.34 14.60 39.10 3.66
3132 5472 4.910585 CGGGCGGTACCTCCATGC 62.911 72.222 22.34 11.48 39.10 4.06
3134 5474 4.564110 GGCGGTACCTCCATGCCC 62.564 72.222 16.38 0.00 36.93 5.36
3135 5475 4.910585 GCGGTACCTCCATGCCCG 62.911 72.222 10.90 0.00 41.50 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.625764 GGTAACATGCGAGCCTTCATTAA 59.374 43.478 0.00 0.00 0.00 1.40
2 3 3.202906 GGTAACATGCGAGCCTTCATTA 58.797 45.455 0.00 0.00 0.00 1.90
3 4 2.017049 GGTAACATGCGAGCCTTCATT 58.983 47.619 0.00 0.00 0.00 2.57
6 7 3.153024 TGGTAACATGCGAGCCTTC 57.847 52.632 0.00 0.00 46.17 3.46
26 27 8.945193 ACCTTCATAATGGGTAGTAACATATGT 58.055 33.333 1.41 1.41 0.00 2.29
37 38 9.886337 TCTATGTTACTACCTTCATAATGGGTA 57.114 33.333 0.00 0.00 34.86 3.69
38 39 8.648693 GTCTATGTTACTACCTTCATAATGGGT 58.351 37.037 0.00 0.00 37.16 4.51
39 40 8.871125 AGTCTATGTTACTACCTTCATAATGGG 58.129 37.037 0.00 0.00 0.00 4.00
46 47 9.964354 TGTTACTAGTCTATGTTACTACCTTCA 57.036 33.333 0.00 0.00 0.00 3.02
82 83 9.775854 GTCATAGTGGTGAGTAATAGACTAGTA 57.224 37.037 0.00 0.00 39.06 1.82
83 84 7.720515 GGTCATAGTGGTGAGTAATAGACTAGT 59.279 40.741 0.00 0.00 39.06 2.57
84 85 7.720074 TGGTCATAGTGGTGAGTAATAGACTAG 59.280 40.741 0.00 0.00 39.06 2.57
85 86 7.580007 TGGTCATAGTGGTGAGTAATAGACTA 58.420 38.462 0.00 0.00 39.06 2.59
86 87 6.432581 TGGTCATAGTGGTGAGTAATAGACT 58.567 40.000 0.00 0.00 42.90 3.24
87 88 6.710597 TGGTCATAGTGGTGAGTAATAGAC 57.289 41.667 0.00 0.00 0.00 2.59
88 89 5.302059 GCTGGTCATAGTGGTGAGTAATAGA 59.698 44.000 0.00 0.00 0.00 1.98
89 90 5.509840 GGCTGGTCATAGTGGTGAGTAATAG 60.510 48.000 0.00 0.00 0.00 1.73
90 91 4.344102 GGCTGGTCATAGTGGTGAGTAATA 59.656 45.833 0.00 0.00 0.00 0.98
91 92 3.134804 GGCTGGTCATAGTGGTGAGTAAT 59.865 47.826 0.00 0.00 0.00 1.89
92 93 2.500098 GGCTGGTCATAGTGGTGAGTAA 59.500 50.000 0.00 0.00 0.00 2.24
93 94 2.108168 GGCTGGTCATAGTGGTGAGTA 58.892 52.381 0.00 0.00 0.00 2.59
94 95 0.905357 GGCTGGTCATAGTGGTGAGT 59.095 55.000 0.00 0.00 0.00 3.41
95 96 1.198713 AGGCTGGTCATAGTGGTGAG 58.801 55.000 0.00 0.00 0.00 3.51
96 97 2.500098 GTTAGGCTGGTCATAGTGGTGA 59.500 50.000 0.00 0.00 0.00 4.02
97 98 2.236146 TGTTAGGCTGGTCATAGTGGTG 59.764 50.000 0.00 0.00 0.00 4.17
98 99 2.546899 TGTTAGGCTGGTCATAGTGGT 58.453 47.619 0.00 0.00 0.00 4.16
99 100 3.627395 TTGTTAGGCTGGTCATAGTGG 57.373 47.619 0.00 0.00 0.00 4.00
100 101 6.515272 AATTTTGTTAGGCTGGTCATAGTG 57.485 37.500 0.00 0.00 0.00 2.74
101 102 6.948309 AGAAATTTTGTTAGGCTGGTCATAGT 59.052 34.615 0.00 0.00 0.00 2.12
102 103 7.396540 AGAAATTTTGTTAGGCTGGTCATAG 57.603 36.000 0.00 0.00 0.00 2.23
103 104 7.601856 CAAGAAATTTTGTTAGGCTGGTCATA 58.398 34.615 0.00 0.00 0.00 2.15
104 105 6.458210 CAAGAAATTTTGTTAGGCTGGTCAT 58.542 36.000 0.00 0.00 0.00 3.06
105 106 5.738783 GCAAGAAATTTTGTTAGGCTGGTCA 60.739 40.000 0.00 0.00 0.00 4.02
106 107 4.686091 GCAAGAAATTTTGTTAGGCTGGTC 59.314 41.667 0.00 0.00 0.00 4.02
107 108 4.344968 AGCAAGAAATTTTGTTAGGCTGGT 59.655 37.500 0.00 0.00 0.00 4.00
108 109 4.886579 AGCAAGAAATTTTGTTAGGCTGG 58.113 39.130 0.00 0.00 0.00 4.85
109 110 4.925646 GGAGCAAGAAATTTTGTTAGGCTG 59.074 41.667 8.11 0.00 0.00 4.85
110 111 4.321230 CGGAGCAAGAAATTTTGTTAGGCT 60.321 41.667 4.24 4.24 0.00 4.58
111 112 3.920412 CGGAGCAAGAAATTTTGTTAGGC 59.080 43.478 0.00 0.00 0.00 3.93
112 113 5.121221 ACGGAGCAAGAAATTTTGTTAGG 57.879 39.130 0.00 0.00 0.00 2.69
113 114 5.629435 GGAACGGAGCAAGAAATTTTGTTAG 59.371 40.000 0.00 0.00 0.00 2.34
114 115 5.300792 AGGAACGGAGCAAGAAATTTTGTTA 59.699 36.000 0.00 0.00 0.00 2.41
115 116 4.099419 AGGAACGGAGCAAGAAATTTTGTT 59.901 37.500 0.00 0.00 0.00 2.83
116 117 3.636764 AGGAACGGAGCAAGAAATTTTGT 59.363 39.130 0.00 0.00 0.00 2.83
117 118 3.983344 CAGGAACGGAGCAAGAAATTTTG 59.017 43.478 0.00 0.00 0.00 2.44
118 119 3.888930 TCAGGAACGGAGCAAGAAATTTT 59.111 39.130 0.00 0.00 0.00 1.82
119 120 3.486383 TCAGGAACGGAGCAAGAAATTT 58.514 40.909 0.00 0.00 0.00 1.82
120 121 3.140325 TCAGGAACGGAGCAAGAAATT 57.860 42.857 0.00 0.00 0.00 1.82
121 122 2.859165 TCAGGAACGGAGCAAGAAAT 57.141 45.000 0.00 0.00 0.00 2.17
122 123 2.859165 ATCAGGAACGGAGCAAGAAA 57.141 45.000 0.00 0.00 35.10 2.52
123 124 2.859165 AATCAGGAACGGAGCAAGAA 57.141 45.000 0.00 0.00 35.10 2.52
124 125 2.859165 AAATCAGGAACGGAGCAAGA 57.141 45.000 0.00 0.00 35.10 3.02
125 126 4.215399 TGTTAAAATCAGGAACGGAGCAAG 59.785 41.667 0.00 0.00 35.10 4.01
126 127 4.023536 GTGTTAAAATCAGGAACGGAGCAA 60.024 41.667 0.00 0.00 35.10 3.91
127 128 3.500680 GTGTTAAAATCAGGAACGGAGCA 59.499 43.478 0.00 0.00 35.10 4.26
128 129 3.119955 GGTGTTAAAATCAGGAACGGAGC 60.120 47.826 0.00 0.00 35.10 4.70
129 130 3.439129 GGGTGTTAAAATCAGGAACGGAG 59.561 47.826 0.00 0.00 35.10 4.63
130 131 3.073356 AGGGTGTTAAAATCAGGAACGGA 59.927 43.478 0.00 0.00 36.71 4.69
131 132 3.418047 AGGGTGTTAAAATCAGGAACGG 58.582 45.455 0.00 0.00 0.00 4.44
132 133 4.069304 TGAGGGTGTTAAAATCAGGAACG 58.931 43.478 0.00 0.00 0.00 3.95
133 134 6.590234 AATGAGGGTGTTAAAATCAGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
134 135 8.581578 GTTAAATGAGGGTGTTAAAATCAGGAA 58.418 33.333 0.00 0.00 0.00 3.36
135 136 7.726291 TGTTAAATGAGGGTGTTAAAATCAGGA 59.274 33.333 0.00 0.00 0.00 3.86
136 137 7.891561 TGTTAAATGAGGGTGTTAAAATCAGG 58.108 34.615 0.00 0.00 0.00 3.86
137 138 9.757227 TTTGTTAAATGAGGGTGTTAAAATCAG 57.243 29.630 0.00 0.00 0.00 2.90
138 139 9.535878 GTTTGTTAAATGAGGGTGTTAAAATCA 57.464 29.630 0.00 0.00 0.00 2.57
139 140 9.758651 AGTTTGTTAAATGAGGGTGTTAAAATC 57.241 29.630 0.00 0.00 0.00 2.17
143 144 9.186837 TGTTAGTTTGTTAAATGAGGGTGTTAA 57.813 29.630 0.00 0.00 0.00 2.01
144 145 8.749026 TGTTAGTTTGTTAAATGAGGGTGTTA 57.251 30.769 0.00 0.00 0.00 2.41
145 146 7.558444 TCTGTTAGTTTGTTAAATGAGGGTGTT 59.442 33.333 0.00 0.00 0.00 3.32
146 147 7.012989 GTCTGTTAGTTTGTTAAATGAGGGTGT 59.987 37.037 0.00 0.00 0.00 4.16
147 148 7.012894 TGTCTGTTAGTTTGTTAAATGAGGGTG 59.987 37.037 0.00 0.00 0.00 4.61
148 149 7.057894 TGTCTGTTAGTTTGTTAAATGAGGGT 58.942 34.615 0.00 0.00 0.00 4.34
149 150 7.504924 TGTCTGTTAGTTTGTTAAATGAGGG 57.495 36.000 0.00 0.00 0.00 4.30
150 151 9.796120 TTTTGTCTGTTAGTTTGTTAAATGAGG 57.204 29.630 0.00 0.00 0.00 3.86
163 164 9.520204 CAACAATTCAGATTTTTGTCTGTTAGT 57.480 29.630 4.07 0.00 44.66 2.24
164 165 9.734620 TCAACAATTCAGATTTTTGTCTGTTAG 57.265 29.630 4.07 0.00 44.66 2.34
166 167 9.434420 TTTCAACAATTCAGATTTTTGTCTGTT 57.566 25.926 4.07 0.00 44.66 3.16
167 168 8.872845 GTTTCAACAATTCAGATTTTTGTCTGT 58.127 29.630 4.07 0.00 44.66 3.41
168 169 8.330302 GGTTTCAACAATTCAGATTTTTGTCTG 58.670 33.333 0.00 0.00 45.51 3.51
169 170 8.260114 AGGTTTCAACAATTCAGATTTTTGTCT 58.740 29.630 0.00 0.00 35.45 3.41
170 171 8.424274 AGGTTTCAACAATTCAGATTTTTGTC 57.576 30.769 0.00 0.00 35.45 3.18
171 172 9.883142 TTAGGTTTCAACAATTCAGATTTTTGT 57.117 25.926 0.00 0.00 35.45 2.83
175 176 9.696917 GTCATTAGGTTTCAACAATTCAGATTT 57.303 29.630 0.00 0.00 0.00 2.17
176 177 8.306761 GGTCATTAGGTTTCAACAATTCAGATT 58.693 33.333 0.00 0.00 0.00 2.40
177 178 7.671398 AGGTCATTAGGTTTCAACAATTCAGAT 59.329 33.333 0.00 0.00 0.00 2.90
178 179 7.004086 AGGTCATTAGGTTTCAACAATTCAGA 58.996 34.615 0.00 0.00 0.00 3.27
179 180 7.219484 AGGTCATTAGGTTTCAACAATTCAG 57.781 36.000 0.00 0.00 0.00 3.02
180 181 8.698973 TTAGGTCATTAGGTTTCAACAATTCA 57.301 30.769 0.00 0.00 0.00 2.57
181 182 8.244113 CCTTAGGTCATTAGGTTTCAACAATTC 58.756 37.037 0.00 0.00 0.00 2.17
182 183 7.178451 CCCTTAGGTCATTAGGTTTCAACAATT 59.822 37.037 0.00 0.00 0.00 2.32
183 184 6.663523 CCCTTAGGTCATTAGGTTTCAACAAT 59.336 38.462 0.00 0.00 0.00 2.71
184 185 6.007703 CCCTTAGGTCATTAGGTTTCAACAA 58.992 40.000 0.00 0.00 0.00 2.83
185 186 5.566469 CCCTTAGGTCATTAGGTTTCAACA 58.434 41.667 0.00 0.00 0.00 3.33
186 187 4.398358 GCCCTTAGGTCATTAGGTTTCAAC 59.602 45.833 0.00 0.00 34.57 3.18
187 188 4.569015 GGCCCTTAGGTCATTAGGTTTCAA 60.569 45.833 0.00 0.00 37.86 2.69
188 189 3.053917 GGCCCTTAGGTCATTAGGTTTCA 60.054 47.826 0.00 0.00 37.86 2.69
189 190 3.202373 AGGCCCTTAGGTCATTAGGTTTC 59.798 47.826 0.00 0.00 41.85 2.78
190 191 3.198827 AGGCCCTTAGGTCATTAGGTTT 58.801 45.455 0.00 0.00 41.85 3.27
191 192 2.859951 AGGCCCTTAGGTCATTAGGTT 58.140 47.619 0.00 0.00 41.85 3.50
192 193 2.588925 AGGCCCTTAGGTCATTAGGT 57.411 50.000 0.00 0.00 41.85 3.08
193 194 2.106684 GGAAGGCCCTTAGGTCATTAGG 59.893 54.545 0.00 0.00 41.85 2.69
194 195 2.224305 CGGAAGGCCCTTAGGTCATTAG 60.224 54.545 0.00 0.00 41.85 1.73
195 196 1.766496 CGGAAGGCCCTTAGGTCATTA 59.234 52.381 0.00 0.00 41.85 1.90
196 197 0.546598 CGGAAGGCCCTTAGGTCATT 59.453 55.000 0.00 0.00 41.85 2.57
197 198 0.326238 TCGGAAGGCCCTTAGGTCAT 60.326 55.000 0.00 0.00 41.85 3.06
198 199 0.545787 TTCGGAAGGCCCTTAGGTCA 60.546 55.000 0.00 0.00 41.85 4.02
199 200 0.616891 TTTCGGAAGGCCCTTAGGTC 59.383 55.000 0.00 0.00 38.43 3.85
200 201 0.618981 CTTTCGGAAGGCCCTTAGGT 59.381 55.000 0.00 0.00 34.57 3.08
201 202 0.909623 TCTTTCGGAAGGCCCTTAGG 59.090 55.000 2.97 0.00 33.56 2.69
202 203 2.633488 CTTCTTTCGGAAGGCCCTTAG 58.367 52.381 2.97 0.00 45.55 2.18
203 204 2.781681 CTTCTTTCGGAAGGCCCTTA 57.218 50.000 2.97 0.00 45.55 2.69
204 205 3.652581 CTTCTTTCGGAAGGCCCTT 57.347 52.632 2.97 0.00 45.55 3.95
211 212 4.141779 GGGGTAATAGCTCTTCTTTCGGAA 60.142 45.833 0.00 0.00 0.00 4.30
212 213 3.387050 GGGGTAATAGCTCTTCTTTCGGA 59.613 47.826 0.00 0.00 0.00 4.55
213 214 3.134081 TGGGGTAATAGCTCTTCTTTCGG 59.866 47.826 0.00 0.00 0.00 4.30
214 215 4.120589 GTGGGGTAATAGCTCTTCTTTCG 58.879 47.826 0.00 0.00 0.00 3.46
215 216 5.099042 TGTGGGGTAATAGCTCTTCTTTC 57.901 43.478 0.00 0.00 0.00 2.62
216 217 5.717119 ATGTGGGGTAATAGCTCTTCTTT 57.283 39.130 0.00 0.00 0.00 2.52
217 218 6.824958 TTATGTGGGGTAATAGCTCTTCTT 57.175 37.500 0.00 0.00 0.00 2.52
218 219 7.394144 AATTATGTGGGGTAATAGCTCTTCT 57.606 36.000 0.00 0.00 0.00 2.85
219 220 9.000486 GTAAATTATGTGGGGTAATAGCTCTTC 58.000 37.037 0.00 0.00 0.00 2.87
220 221 8.499406 TGTAAATTATGTGGGGTAATAGCTCTT 58.501 33.333 0.00 0.00 0.00 2.85
221 222 7.937394 GTGTAAATTATGTGGGGTAATAGCTCT 59.063 37.037 0.00 0.00 0.00 4.09
222 223 7.937394 AGTGTAAATTATGTGGGGTAATAGCTC 59.063 37.037 0.00 0.00 0.00 4.09
223 224 7.812306 AGTGTAAATTATGTGGGGTAATAGCT 58.188 34.615 0.00 0.00 0.00 3.32
224 225 8.996271 GTAGTGTAAATTATGTGGGGTAATAGC 58.004 37.037 0.00 0.00 0.00 2.97
225 226 9.199982 CGTAGTGTAAATTATGTGGGGTAATAG 57.800 37.037 0.00 0.00 0.00 1.73
226 227 8.922237 TCGTAGTGTAAATTATGTGGGGTAATA 58.078 33.333 0.00 0.00 0.00 0.98
227 228 7.794041 TCGTAGTGTAAATTATGTGGGGTAAT 58.206 34.615 0.00 0.00 0.00 1.89
228 229 7.180322 TCGTAGTGTAAATTATGTGGGGTAA 57.820 36.000 0.00 0.00 0.00 2.85
229 230 6.788598 TCGTAGTGTAAATTATGTGGGGTA 57.211 37.500 0.00 0.00 0.00 3.69
230 231 5.680594 TCGTAGTGTAAATTATGTGGGGT 57.319 39.130 0.00 0.00 0.00 4.95
231 232 6.342906 TCTTCGTAGTGTAAATTATGTGGGG 58.657 40.000 0.00 0.00 0.00 4.96
250 251 6.338146 TCCATAAGGTTGTGTTATCTCTTCG 58.662 40.000 0.00 0.00 35.89 3.79
285 286 4.725490 TCCCTGTTTAGTTTGCTAGCTTT 58.275 39.130 17.23 1.30 0.00 3.51
286 287 4.367039 TCCCTGTTTAGTTTGCTAGCTT 57.633 40.909 17.23 1.67 0.00 3.74
287 288 4.367039 TTCCCTGTTTAGTTTGCTAGCT 57.633 40.909 17.23 0.00 0.00 3.32
288 289 4.321008 GGTTTCCCTGTTTAGTTTGCTAGC 60.321 45.833 8.10 8.10 0.00 3.42
289 290 4.825085 TGGTTTCCCTGTTTAGTTTGCTAG 59.175 41.667 0.00 0.00 0.00 3.42
290 291 4.794334 TGGTTTCCCTGTTTAGTTTGCTA 58.206 39.130 0.00 0.00 0.00 3.49
291 292 3.637769 TGGTTTCCCTGTTTAGTTTGCT 58.362 40.909 0.00 0.00 0.00 3.91
292 293 4.556233 GATGGTTTCCCTGTTTAGTTTGC 58.444 43.478 0.00 0.00 0.00 3.68
293 294 4.586841 TGGATGGTTTCCCTGTTTAGTTTG 59.413 41.667 0.00 0.00 44.77 2.93
294 295 4.810345 TGGATGGTTTCCCTGTTTAGTTT 58.190 39.130 0.00 0.00 44.77 2.66
295 296 4.105697 TCTGGATGGTTTCCCTGTTTAGTT 59.894 41.667 0.00 0.00 44.77 2.24
299 300 2.447047 AGTCTGGATGGTTTCCCTGTTT 59.553 45.455 0.00 0.00 44.77 2.83
301 302 1.747444 AGTCTGGATGGTTTCCCTGT 58.253 50.000 0.00 0.00 44.77 4.00
315 316 8.043710 AGAGGGAGTAATAAATTGTCAAGTCTG 58.956 37.037 0.00 0.00 0.00 3.51
331 332 8.810041 ACGAGTATTTTAGAAAAGAGGGAGTAA 58.190 33.333 0.00 0.00 0.00 2.24
336 337 7.764443 TCATGACGAGTATTTTAGAAAAGAGGG 59.236 37.037 0.00 0.00 0.00 4.30
355 356 6.338146 TCCCTCTGTAACTAAAATCATGACG 58.662 40.000 0.00 0.00 0.00 4.35
362 363 7.553044 GCAACATACTCCCTCTGTAACTAAAAT 59.447 37.037 0.00 0.00 0.00 1.82
363 364 6.877322 GCAACATACTCCCTCTGTAACTAAAA 59.123 38.462 0.00 0.00 0.00 1.52
372 373 2.477825 CGATGCAACATACTCCCTCTG 58.522 52.381 0.00 0.00 0.00 3.35
404 405 4.213270 CGTTCAACAATAGGAAGCAAGACA 59.787 41.667 0.00 0.00 0.00 3.41
412 413 4.868171 CCGATCTTCGTTCAACAATAGGAA 59.132 41.667 0.00 0.00 38.40 3.36
416 417 2.601314 CGCCGATCTTCGTTCAACAATA 59.399 45.455 0.00 0.00 38.40 1.90
426 427 2.284150 TGATTTTAAGCGCCGATCTTCG 59.716 45.455 2.29 0.00 40.07 3.79
433 434 1.737793 AGTCCTTGATTTTAAGCGCCG 59.262 47.619 2.29 0.00 0.00 6.46
434 435 3.850122 AAGTCCTTGATTTTAAGCGCC 57.150 42.857 2.29 0.00 0.00 6.53
436 437 7.095187 ACTGTTCTAAGTCCTTGATTTTAAGCG 60.095 37.037 0.00 0.00 0.00 4.68
444 445 6.064717 AGCAAAACTGTTCTAAGTCCTTGAT 58.935 36.000 0.00 0.00 30.16 2.57
445 446 5.437060 AGCAAAACTGTTCTAAGTCCTTGA 58.563 37.500 0.00 0.00 30.16 3.02
446 447 5.757850 AGCAAAACTGTTCTAAGTCCTTG 57.242 39.130 0.00 0.00 0.00 3.61
448 449 7.704271 GTTTTAGCAAAACTGTTCTAAGTCCT 58.296 34.615 13.73 0.00 45.55 3.85
449 450 7.909777 GTTTTAGCAAAACTGTTCTAAGTCC 57.090 36.000 13.73 0.00 45.55 3.85
475 1571 6.589907 TGCAATACTTACGGCACATCTATATG 59.410 38.462 0.00 0.00 39.17 1.78
477 1573 6.091718 TGCAATACTTACGGCACATCTATA 57.908 37.500 0.00 0.00 0.00 1.31
485 1581 3.260475 AGATGTGCAATACTTACGGCA 57.740 42.857 0.00 0.00 0.00 5.69
486 1582 4.809426 ACTTAGATGTGCAATACTTACGGC 59.191 41.667 0.00 0.00 0.00 5.68
487 1583 5.462398 GGACTTAGATGTGCAATACTTACGG 59.538 44.000 0.00 0.00 0.00 4.02
488 1584 6.273825 AGGACTTAGATGTGCAATACTTACG 58.726 40.000 0.00 0.00 0.00 3.18
489 1585 9.197694 CATAGGACTTAGATGTGCAATACTTAC 57.802 37.037 0.00 0.00 0.00 2.34
490 1586 9.143155 TCATAGGACTTAGATGTGCAATACTTA 57.857 33.333 0.00 0.00 0.00 2.24
491 1587 7.928706 GTCATAGGACTTAGATGTGCAATACTT 59.071 37.037 0.00 0.00 40.99 2.24
492 1588 7.069950 TGTCATAGGACTTAGATGTGCAATACT 59.930 37.037 9.22 0.00 44.61 2.12
493 1589 7.210174 TGTCATAGGACTTAGATGTGCAATAC 58.790 38.462 9.22 0.00 44.61 1.89
494 1590 7.360113 TGTCATAGGACTTAGATGTGCAATA 57.640 36.000 9.22 0.00 44.61 1.90
495 1591 6.239217 TGTCATAGGACTTAGATGTGCAAT 57.761 37.500 9.22 0.00 44.61 3.56
496 1592 5.675684 TGTCATAGGACTTAGATGTGCAA 57.324 39.130 9.22 0.00 44.61 4.08
497 1593 5.876651 ATGTCATAGGACTTAGATGTGCA 57.123 39.130 9.22 0.00 44.61 4.57
498 1594 6.283694 TCAATGTCATAGGACTTAGATGTGC 58.716 40.000 9.22 0.00 44.61 4.57
499 1595 8.366401 AGATCAATGTCATAGGACTTAGATGTG 58.634 37.037 9.22 0.00 44.61 3.21
500 1596 8.489676 AGATCAATGTCATAGGACTTAGATGT 57.510 34.615 9.22 5.08 44.61 3.06
503 1599 8.568794 CGTAAGATCAATGTCATAGGACTTAGA 58.431 37.037 9.22 4.21 42.35 2.10
504 1600 8.353684 ACGTAAGATCAATGTCATAGGACTTAG 58.646 37.037 9.22 0.00 42.62 2.18
505 1601 8.234136 ACGTAAGATCAATGTCATAGGACTTA 57.766 34.615 9.22 0.00 42.62 2.24
506 1602 7.113658 ACGTAAGATCAATGTCATAGGACTT 57.886 36.000 9.22 0.00 42.62 3.01
507 1603 6.716934 ACGTAAGATCAATGTCATAGGACT 57.283 37.500 9.22 0.00 42.62 3.85
508 1604 6.978659 TCAACGTAAGATCAATGTCATAGGAC 59.021 38.462 0.00 0.00 42.53 3.85
509 1605 7.068226 TCTCAACGTAAGATCAATGTCATAGGA 59.932 37.037 0.00 0.00 43.62 2.94
510 1606 7.203218 TCTCAACGTAAGATCAATGTCATAGG 58.797 38.462 0.00 0.00 43.62 2.57
511 1607 8.809159 ATCTCAACGTAAGATCAATGTCATAG 57.191 34.615 7.39 0.00 43.62 2.23
512 1608 9.249457 GAATCTCAACGTAAGATCAATGTCATA 57.751 33.333 12.34 0.00 43.62 2.15
513 1609 7.043125 CGAATCTCAACGTAAGATCAATGTCAT 60.043 37.037 12.34 0.00 43.62 3.06
514 1610 6.253512 CGAATCTCAACGTAAGATCAATGTCA 59.746 38.462 12.34 0.00 43.62 3.58
515 1611 6.253727 ACGAATCTCAACGTAAGATCAATGTC 59.746 38.462 12.34 6.62 40.92 3.06
516 1612 6.035005 CACGAATCTCAACGTAAGATCAATGT 59.965 38.462 12.34 7.30 40.76 2.71
517 1613 6.035005 ACACGAATCTCAACGTAAGATCAATG 59.965 38.462 12.34 12.21 40.76 2.82
518 1614 6.035005 CACACGAATCTCAACGTAAGATCAAT 59.965 38.462 12.34 0.02 40.76 2.57
519 1615 5.344933 CACACGAATCTCAACGTAAGATCAA 59.655 40.000 12.34 0.00 40.76 2.57
520 1616 4.857037 CACACGAATCTCAACGTAAGATCA 59.143 41.667 12.34 0.00 40.76 2.92
521 1617 4.265556 CCACACGAATCTCAACGTAAGATC 59.734 45.833 12.34 6.90 40.76 2.75
522 1618 4.082408 TCCACACGAATCTCAACGTAAGAT 60.082 41.667 7.39 7.39 40.76 2.40
523 1619 3.253921 TCCACACGAATCTCAACGTAAGA 59.746 43.478 3.32 3.32 40.76 2.10
524 1620 3.571571 TCCACACGAATCTCAACGTAAG 58.428 45.455 0.00 0.00 40.76 2.34
525 1621 3.646611 TCCACACGAATCTCAACGTAA 57.353 42.857 0.00 0.00 40.76 3.18
526 1622 3.861276 ATCCACACGAATCTCAACGTA 57.139 42.857 0.00 0.00 40.76 3.57
527 1623 2.743636 ATCCACACGAATCTCAACGT 57.256 45.000 0.00 0.00 43.50 3.99
528 1624 5.718649 AAATATCCACACGAATCTCAACG 57.281 39.130 0.00 0.00 0.00 4.10
529 1625 7.308782 AGAAAATATCCACACGAATCTCAAC 57.691 36.000 0.00 0.00 0.00 3.18
530 1626 7.921786 AAGAAAATATCCACACGAATCTCAA 57.078 32.000 0.00 0.00 0.00 3.02
531 1627 7.921786 AAAGAAAATATCCACACGAATCTCA 57.078 32.000 0.00 0.00 0.00 3.27
572 1668 9.421399 TCCATCTAAGTGAGTGAATCAAGTATA 57.579 33.333 0.00 0.00 40.43 1.47
573 1669 8.200792 GTCCATCTAAGTGAGTGAATCAAGTAT 58.799 37.037 0.00 0.00 40.43 2.12
574 1670 7.178451 TGTCCATCTAAGTGAGTGAATCAAGTA 59.822 37.037 0.00 0.00 40.43 2.24
575 1671 6.014242 TGTCCATCTAAGTGAGTGAATCAAGT 60.014 38.462 0.00 0.00 40.43 3.16
576 1672 6.401394 TGTCCATCTAAGTGAGTGAATCAAG 58.599 40.000 0.00 0.00 40.43 3.02
577 1673 6.358974 TGTCCATCTAAGTGAGTGAATCAA 57.641 37.500 0.00 0.00 40.43 2.57
578 1674 6.358974 TTGTCCATCTAAGTGAGTGAATCA 57.641 37.500 0.00 0.00 34.79 2.57
579 1675 8.821894 GTTATTGTCCATCTAAGTGAGTGAATC 58.178 37.037 0.00 0.00 0.00 2.52
580 1676 8.543774 AGTTATTGTCCATCTAAGTGAGTGAAT 58.456 33.333 0.00 0.00 0.00 2.57
581 1677 7.907389 AGTTATTGTCCATCTAAGTGAGTGAA 58.093 34.615 0.00 0.00 0.00 3.18
582 1678 7.482169 AGTTATTGTCCATCTAAGTGAGTGA 57.518 36.000 0.00 0.00 0.00 3.41
583 1679 8.687242 TCTAGTTATTGTCCATCTAAGTGAGTG 58.313 37.037 0.00 0.00 0.00 3.51
584 1680 8.824756 TCTAGTTATTGTCCATCTAAGTGAGT 57.175 34.615 0.00 0.00 0.00 3.41
585 1681 7.865385 GCTCTAGTTATTGTCCATCTAAGTGAG 59.135 40.741 0.00 0.00 0.00 3.51
586 1682 7.342026 TGCTCTAGTTATTGTCCATCTAAGTGA 59.658 37.037 0.00 0.00 0.00 3.41
587 1683 7.436673 GTGCTCTAGTTATTGTCCATCTAAGTG 59.563 40.741 0.00 0.00 0.00 3.16
588 1684 7.124298 TGTGCTCTAGTTATTGTCCATCTAAGT 59.876 37.037 0.00 0.00 0.00 2.24
589 1685 7.492524 TGTGCTCTAGTTATTGTCCATCTAAG 58.507 38.462 0.00 0.00 0.00 2.18
590 1686 7.418337 TGTGCTCTAGTTATTGTCCATCTAA 57.582 36.000 0.00 0.00 0.00 2.10
591 1687 7.603180 ATGTGCTCTAGTTATTGTCCATCTA 57.397 36.000 0.00 0.00 0.00 1.98
592 1688 5.939764 TGTGCTCTAGTTATTGTCCATCT 57.060 39.130 0.00 0.00 0.00 2.90
593 1689 7.559590 AAATGTGCTCTAGTTATTGTCCATC 57.440 36.000 0.00 0.00 0.00 3.51
594 1690 8.486210 TCTAAATGTGCTCTAGTTATTGTCCAT 58.514 33.333 0.00 0.00 0.00 3.41
595 1691 7.847096 TCTAAATGTGCTCTAGTTATTGTCCA 58.153 34.615 0.00 0.00 0.00 4.02
596 1692 8.768955 CATCTAAATGTGCTCTAGTTATTGTCC 58.231 37.037 0.00 0.00 0.00 4.02
597 1693 9.319143 ACATCTAAATGTGCTCTAGTTATTGTC 57.681 33.333 0.00 0.00 44.51 3.18
600 1696 9.765795 GGTACATCTAAATGTGCTCTAGTTATT 57.234 33.333 6.59 0.00 45.72 1.40
601 1697 8.368668 GGGTACATCTAAATGTGCTCTAGTTAT 58.631 37.037 6.59 0.00 45.72 1.89
602 1698 7.723324 GGGTACATCTAAATGTGCTCTAGTTA 58.277 38.462 6.59 0.00 45.72 2.24
603 1699 6.583562 GGGTACATCTAAATGTGCTCTAGTT 58.416 40.000 6.59 0.00 45.72 2.24
604 1700 6.163135 GGGTACATCTAAATGTGCTCTAGT 57.837 41.667 6.59 0.00 45.72 2.57
608 1704 6.183360 TGTCTAGGGTACATCTAAATGTGCTC 60.183 42.308 6.59 3.02 46.17 4.26
609 1705 5.661312 TGTCTAGGGTACATCTAAATGTGCT 59.339 40.000 6.59 0.00 45.72 4.40
610 1706 5.753921 GTGTCTAGGGTACATCTAAATGTGC 59.246 44.000 0.00 0.06 45.72 4.57
611 1707 6.757010 GTGTGTCTAGGGTACATCTAAATGTG 59.243 42.308 0.00 0.00 45.72 3.21
613 1709 6.281405 GGTGTGTCTAGGGTACATCTAAATG 58.719 44.000 0.00 0.00 38.93 2.32
614 1710 5.365895 GGGTGTGTCTAGGGTACATCTAAAT 59.634 44.000 0.00 0.00 0.00 1.40
615 1711 4.713321 GGGTGTGTCTAGGGTACATCTAAA 59.287 45.833 0.00 0.00 0.00 1.85
616 1712 4.284178 GGGTGTGTCTAGGGTACATCTAA 58.716 47.826 0.00 0.00 0.00 2.10
617 1713 3.686405 CGGGTGTGTCTAGGGTACATCTA 60.686 52.174 0.00 0.00 0.00 1.98
618 1714 2.748388 GGGTGTGTCTAGGGTACATCT 58.252 52.381 0.00 0.00 0.00 2.90
619 1715 1.407979 CGGGTGTGTCTAGGGTACATC 59.592 57.143 0.00 0.00 0.00 3.06
620 1716 1.006281 TCGGGTGTGTCTAGGGTACAT 59.994 52.381 0.00 0.00 0.00 2.29
621 1717 0.405198 TCGGGTGTGTCTAGGGTACA 59.595 55.000 0.00 0.00 0.00 2.90
622 1718 0.813821 GTCGGGTGTGTCTAGGGTAC 59.186 60.000 0.00 0.00 0.00 3.34
623 1719 0.700564 AGTCGGGTGTGTCTAGGGTA 59.299 55.000 0.00 0.00 0.00 3.69
624 1720 0.178941 AAGTCGGGTGTGTCTAGGGT 60.179 55.000 0.00 0.00 0.00 4.34
625 1721 1.749634 CTAAGTCGGGTGTGTCTAGGG 59.250 57.143 0.00 0.00 0.00 3.53
626 1722 2.719739 TCTAAGTCGGGTGTGTCTAGG 58.280 52.381 0.00 0.00 0.00 3.02
627 1723 4.778534 TTTCTAAGTCGGGTGTGTCTAG 57.221 45.455 0.00 0.00 0.00 2.43
628 1724 5.711506 TGTATTTCTAAGTCGGGTGTGTCTA 59.288 40.000 0.00 0.00 0.00 2.59
629 1725 4.525487 TGTATTTCTAAGTCGGGTGTGTCT 59.475 41.667 0.00 0.00 0.00 3.41
630 1726 4.813027 TGTATTTCTAAGTCGGGTGTGTC 58.187 43.478 0.00 0.00 0.00 3.67
631 1727 4.877378 TGTATTTCTAAGTCGGGTGTGT 57.123 40.909 0.00 0.00 0.00 3.72
632 1728 6.548441 TTTTGTATTTCTAAGTCGGGTGTG 57.452 37.500 0.00 0.00 0.00 3.82
633 1729 6.713450 ACATTTTGTATTTCTAAGTCGGGTGT 59.287 34.615 0.00 0.00 0.00 4.16
634 1730 7.094975 TGACATTTTGTATTTCTAAGTCGGGTG 60.095 37.037 0.00 0.00 0.00 4.61
635 1731 6.938030 TGACATTTTGTATTTCTAAGTCGGGT 59.062 34.615 0.00 0.00 0.00 5.28
636 1732 7.119262 ACTGACATTTTGTATTTCTAAGTCGGG 59.881 37.037 0.00 0.00 34.93 5.14
637 1733 8.029642 ACTGACATTTTGTATTTCTAAGTCGG 57.970 34.615 0.00 0.00 36.28 4.79
638 1734 7.893236 CGACTGACATTTTGTATTTCTAAGTCG 59.107 37.037 0.00 0.00 36.49 4.18
657 1753 3.126831 CCTATTTGCTGGATCGACTGAC 58.873 50.000 0.00 0.00 0.00 3.51
682 1778 9.347240 CTTAAATATTGATCAAGGTGTGAGGAT 57.653 33.333 14.54 0.00 40.43 3.24
759 2008 6.441093 AAGGAAGTGTATATGCAATGTGTG 57.559 37.500 0.00 0.00 0.00 3.82
760 2009 7.466746 AAAAGGAAGTGTATATGCAATGTGT 57.533 32.000 0.00 0.00 0.00 3.72
817 2067 8.971073 CCTGGTTTGGATGAAATTAGACTAAAT 58.029 33.333 0.00 0.00 0.00 1.40
840 2090 9.059260 TGATTATCATCATGTCAATGTAACCTG 57.941 33.333 0.00 0.00 34.22 4.00
863 2113 4.827692 TGCCGTGTAAGTTCTGTAATGAT 58.172 39.130 0.00 0.00 0.00 2.45
876 2126 1.268352 GACCAGCAAATTGCCGTGTAA 59.732 47.619 15.04 0.00 46.52 2.41
877 2127 0.878416 GACCAGCAAATTGCCGTGTA 59.122 50.000 15.04 0.00 46.52 2.90
878 2128 0.823356 AGACCAGCAAATTGCCGTGT 60.823 50.000 15.04 9.23 46.52 4.49
879 2129 1.164411 TAGACCAGCAAATTGCCGTG 58.836 50.000 15.04 7.28 46.52 4.94
880 2130 1.539827 GTTAGACCAGCAAATTGCCGT 59.460 47.619 15.04 11.10 46.52 5.68
881 2131 1.135402 GGTTAGACCAGCAAATTGCCG 60.135 52.381 15.04 3.98 46.52 5.69
882 2132 1.204704 GGGTTAGACCAGCAAATTGCC 59.795 52.381 15.04 0.00 41.02 4.52
883 2133 2.171003 AGGGTTAGACCAGCAAATTGC 58.829 47.619 10.41 10.41 41.02 3.56
884 2134 4.589908 ACTAGGGTTAGACCAGCAAATTG 58.410 43.478 0.00 0.00 41.02 2.32
885 2135 4.929146 ACTAGGGTTAGACCAGCAAATT 57.071 40.909 0.00 0.00 41.02 1.82
886 2136 4.929146 AACTAGGGTTAGACCAGCAAAT 57.071 40.909 0.00 0.00 41.02 2.32
887 2137 5.829062 TTAACTAGGGTTAGACCAGCAAA 57.171 39.130 0.00 0.00 41.02 3.68
888 2138 5.249852 ACATTAACTAGGGTTAGACCAGCAA 59.750 40.000 0.00 0.00 41.02 3.91
889 2139 4.781087 ACATTAACTAGGGTTAGACCAGCA 59.219 41.667 0.00 0.00 41.02 4.41
890 2140 5.128991 AGACATTAACTAGGGTTAGACCAGC 59.871 44.000 0.00 0.00 41.02 4.85
891 2141 6.574350 CAGACATTAACTAGGGTTAGACCAG 58.426 44.000 0.00 0.00 41.02 4.00
892 2142 5.105064 GCAGACATTAACTAGGGTTAGACCA 60.105 44.000 0.00 0.00 41.02 4.02
893 2143 5.105064 TGCAGACATTAACTAGGGTTAGACC 60.105 44.000 0.00 0.00 38.86 3.85
894 2144 5.974108 TGCAGACATTAACTAGGGTTAGAC 58.026 41.667 0.00 0.00 38.86 2.59
895 2145 6.014070 TGTTGCAGACATTAACTAGGGTTAGA 60.014 38.462 0.00 0.00 35.00 2.10
896 2146 6.170506 TGTTGCAGACATTAACTAGGGTTAG 58.829 40.000 0.00 0.00 35.00 2.34
897 2147 6.116711 TGTTGCAGACATTAACTAGGGTTA 57.883 37.500 0.00 0.00 33.57 2.85
907 2157 6.987404 TGTAGTACACTTTGTTGCAGACATTA 59.013 34.615 0.00 0.00 38.26 1.90
972 2235 1.898574 GTGGCCTGTGGGTCTGTTG 60.899 63.158 3.32 0.00 38.23 3.33
1074 2337 1.300697 GGTGACGTGGAGCTTTCGT 60.301 57.895 10.55 10.55 40.49 3.85
1137 2400 2.048127 GTCGTCTTCTTGGCGCCT 60.048 61.111 29.70 0.00 44.46 5.52
1278 2541 1.538876 CTGGAGGTTGGGGTCCTGA 60.539 63.158 0.00 0.00 34.52 3.86
1491 2757 1.500783 CCTTCCAGGGAGCAAAGGGA 61.501 60.000 0.00 0.00 35.63 4.20
1517 2789 1.336517 TGAACTCCTACTTCGGTTGCG 60.337 52.381 0.00 0.00 0.00 4.85
1666 2945 2.233271 CATGCTTCCACAAGGTTCACT 58.767 47.619 0.00 0.00 35.89 3.41
1672 2951 1.243342 TTCGGCATGCTTCCACAAGG 61.243 55.000 18.92 0.00 0.00 3.61
1858 3137 1.693640 CCCTCCAGGCCTCACAATT 59.306 57.895 0.00 0.00 0.00 2.32
1941 3220 3.011032 AGCAAGGTTCCATGGAGAAGAAT 59.989 43.478 15.53 0.00 0.00 2.40
1948 3227 1.339055 CGAAGAGCAAGGTTCCATGGA 60.339 52.381 11.44 11.44 0.00 3.41
1962 3241 8.315398 TTGTATGAGCAACAATCTCTCGAAGAG 61.315 40.741 5.76 5.76 43.07 2.85
1964 3243 5.105063 TGTATGAGCAACAATCTCTCGAAG 58.895 41.667 0.00 0.00 0.00 3.79
2126 3430 2.887568 GCATCAGCTCGGGTGACG 60.888 66.667 7.75 2.10 42.86 4.35
2249 3553 5.739161 GCAAGTTAGAAGAACAACACACTTG 59.261 40.000 0.00 0.00 41.77 3.16
2264 3569 2.902705 ACCACGACTTGCAAGTTAGA 57.097 45.000 31.58 0.00 39.88 2.10
2265 3570 2.869801 TGAACCACGACTTGCAAGTTAG 59.130 45.455 31.58 27.74 39.88 2.34
2266 3571 2.907634 TGAACCACGACTTGCAAGTTA 58.092 42.857 31.58 9.46 39.88 2.24
2292 3597 8.316214 ACGGTAGGTTTTATACTTCTGAATTCA 58.684 33.333 8.12 8.12 0.00 2.57
2317 3623 3.195661 AGAAGTTCCACAGACGAAACAC 58.804 45.455 0.00 0.00 0.00 3.32
2324 3630 0.868406 CGGCAAGAAGTTCCACAGAC 59.132 55.000 0.00 0.00 0.00 3.51
2377 3684 0.396435 TATGATGGGATGTCGTGGGC 59.604 55.000 0.00 0.00 0.00 5.36
2395 3702 2.809446 CGGTCGAGCACTGAATGAATA 58.191 47.619 15.89 0.00 32.23 1.75
2415 4217 1.805943 GCAACCAATTTCCAACCATGC 59.194 47.619 0.00 0.00 0.00 4.06
2429 4231 4.386867 TTTATTTTCCAACGTGCAACCA 57.613 36.364 0.00 0.00 0.00 3.67
2459 4261 7.116519 GTCTTCTCTCCTATTGTTGTGTTGTAC 59.883 40.741 0.00 0.00 0.00 2.90
2460 4262 7.152645 GTCTTCTCTCCTATTGTTGTGTTGTA 58.847 38.462 0.00 0.00 0.00 2.41
2461 4263 5.992217 GTCTTCTCTCCTATTGTTGTGTTGT 59.008 40.000 0.00 0.00 0.00 3.32
2462 4264 5.991606 TGTCTTCTCTCCTATTGTTGTGTTG 59.008 40.000 0.00 0.00 0.00 3.33
2463 4265 5.992217 GTGTCTTCTCTCCTATTGTTGTGTT 59.008 40.000 0.00 0.00 0.00 3.32
2464 4266 5.070446 TGTGTCTTCTCTCCTATTGTTGTGT 59.930 40.000 0.00 0.00 0.00 3.72
2465 4267 5.541845 TGTGTCTTCTCTCCTATTGTTGTG 58.458 41.667 0.00 0.00 0.00 3.33
2467 4269 6.401394 TCATGTGTCTTCTCTCCTATTGTTG 58.599 40.000 0.00 0.00 0.00 3.33
2468 4270 6.611613 TCATGTGTCTTCTCTCCTATTGTT 57.388 37.500 0.00 0.00 0.00 2.83
2469 4271 6.611613 TTCATGTGTCTTCTCTCCTATTGT 57.388 37.500 0.00 0.00 0.00 2.71
2470 4272 8.637099 TCTATTCATGTGTCTTCTCTCCTATTG 58.363 37.037 0.00 0.00 0.00 1.90
2516 4642 1.153978 CGTGCAATCATGTGGTGGC 60.154 57.895 0.00 0.00 0.00 5.01
2541 4667 2.076100 TCATGCGTGGAACTGAATCAC 58.924 47.619 5.98 0.00 31.75 3.06
2588 4714 6.690194 AGGATTCTTTTCCATCAGAATTCG 57.310 37.500 0.00 0.00 39.27 3.34
2591 4717 9.759473 TTTCTTAGGATTCTTTTCCATCAGAAT 57.241 29.630 0.00 0.00 41.54 2.40
2621 4747 7.878644 TCGTAGATCGCAGCTTATAGGATATAT 59.121 37.037 0.00 0.00 39.67 0.86
2635 4761 4.091365 TGTTGTTTGATTCGTAGATCGCAG 59.909 41.667 0.00 0.00 39.67 5.18
2642 4768 4.446857 ACGTGTGTTGTTTGATTCGTAG 57.553 40.909 0.00 0.00 0.00 3.51
2645 4771 4.184889 TGTACGTGTGTTGTTTGATTCG 57.815 40.909 0.00 0.00 0.00 3.34
2662 4790 1.525619 GCGTCGCCCAAGATATTGTAC 59.474 52.381 5.75 0.00 0.00 2.90
2665 4984 1.261619 GAAGCGTCGCCCAAGATATTG 59.738 52.381 14.86 0.00 0.00 1.90
2682 5001 0.613260 TTGATCTGACGGTGGGGAAG 59.387 55.000 0.00 0.00 0.00 3.46
2685 5004 1.078426 GGTTGATCTGACGGTGGGG 60.078 63.158 0.00 0.00 0.00 4.96
2709 5028 1.358725 ATCGGTGTTGCGGACATTCG 61.359 55.000 10.27 10.27 41.10 3.34
2726 5045 3.186613 GGGACGCTTTCGGAAATATCATC 59.813 47.826 3.24 0.00 40.69 2.92
2732 5051 0.323629 TGAGGGACGCTTTCGGAAAT 59.676 50.000 3.24 0.00 40.69 2.17
2738 5057 2.151202 TGTGAAATGAGGGACGCTTTC 58.849 47.619 0.00 0.00 0.00 2.62
2765 5102 2.034066 CAGACCGGCCATGTTGGT 59.966 61.111 0.00 0.00 40.46 3.67
2791 5128 3.184178 CGCCCATGTTTTGAAAACATCAC 59.816 43.478 27.88 19.66 38.69 3.06
2810 5147 2.408835 CCGGATTGCAACATCGCC 59.591 61.111 0.00 0.00 0.00 5.54
2815 5152 3.053291 GGTCGCCGGATTGCAACA 61.053 61.111 5.05 0.00 0.00 3.33
2826 5163 2.887568 CTGATGACGCAGGTCGCC 60.888 66.667 0.00 0.00 46.49 5.54
2836 5173 0.166814 GTTGTGAAGGCGCTGATGAC 59.833 55.000 7.64 0.00 0.00 3.06
2841 5178 2.664851 TCGGTTGTGAAGGCGCTG 60.665 61.111 7.64 0.00 0.00 5.18
2849 5186 1.504359 GGAAACATCGTCGGTTGTGA 58.496 50.000 3.08 0.00 0.00 3.58
2868 5205 5.233050 TGGTTTTAACATGTCAATTGTTGCG 59.767 36.000 5.13 0.00 37.81 4.85
2877 5214 3.067461 GGTGCACTGGTTTTAACATGTCA 59.933 43.478 17.98 0.00 0.00 3.58
2879 5216 3.027412 TGGTGCACTGGTTTTAACATGT 58.973 40.909 17.98 0.00 0.00 3.21
2884 5221 4.744795 ATGTTTGGTGCACTGGTTTTAA 57.255 36.364 17.98 0.00 0.00 1.52
2886 5223 3.449018 TGTATGTTTGGTGCACTGGTTTT 59.551 39.130 17.98 1.07 0.00 2.43
2891 5229 3.921119 ACATGTATGTTTGGTGCACTG 57.079 42.857 17.98 5.31 37.90 3.66
2906 5244 6.708949 ACTACCAGTATGTTTCGAAAACATGT 59.291 34.615 24.04 18.39 40.70 3.21
2913 5251 6.762187 TGTTTCAACTACCAGTATGTTTCGAA 59.238 34.615 0.00 0.00 0.00 3.71
2914 5252 6.282167 TGTTTCAACTACCAGTATGTTTCGA 58.718 36.000 0.00 0.00 0.00 3.71
2915 5253 6.533819 TGTTTCAACTACCAGTATGTTTCG 57.466 37.500 0.00 0.00 0.00 3.46
2916 5254 8.015658 GTGATGTTTCAACTACCAGTATGTTTC 58.984 37.037 0.00 0.00 32.48 2.78
2917 5255 7.719633 AGTGATGTTTCAACTACCAGTATGTTT 59.280 33.333 0.00 0.00 32.48 2.83
2918 5256 7.173218 CAGTGATGTTTCAACTACCAGTATGTT 59.827 37.037 0.00 0.00 32.48 2.71
2919 5257 6.650807 CAGTGATGTTTCAACTACCAGTATGT 59.349 38.462 0.00 0.00 32.48 2.29
2920 5258 6.650807 ACAGTGATGTTTCAACTACCAGTATG 59.349 38.462 0.00 0.00 32.48 2.39
2921 5259 6.769512 ACAGTGATGTTTCAACTACCAGTAT 58.230 36.000 0.00 0.00 32.48 2.12
2927 5265 3.120649 GCCGACAGTGATGTTTCAACTAC 60.121 47.826 0.00 0.00 32.48 2.73
2932 5270 2.076100 GATGCCGACAGTGATGTTTCA 58.924 47.619 0.00 0.00 0.00 2.69
2934 5272 1.271325 TGGATGCCGACAGTGATGTTT 60.271 47.619 0.00 0.00 0.00 2.83
2985 5324 1.832719 TTGTGCTACAAGCCCCGCTA 61.833 55.000 0.00 0.00 41.51 4.26
2987 5326 2.671619 TTGTGCTACAAGCCCCGC 60.672 61.111 0.00 0.00 41.51 6.13
3012 5351 0.109919 CGCTACAAAAGGGGTTTCGC 60.110 55.000 0.00 0.00 34.56 4.70
3046 5386 0.959553 GATGGCCTCATGGATGCAAG 59.040 55.000 3.32 0.00 32.98 4.01
3083 5423 1.446272 CTCTTGTCGTCGGAAGCCC 60.446 63.158 0.00 0.00 0.00 5.19
3090 5430 1.081376 ACCGAAGCTCTTGTCGTCG 60.081 57.895 4.94 0.04 35.48 5.12
3092 5432 1.006102 CCACCGAAGCTCTTGTCGT 60.006 57.895 4.94 0.00 35.48 4.34
3093 5433 1.738099 CCCACCGAAGCTCTTGTCG 60.738 63.158 0.00 0.00 37.01 4.35
3096 5436 3.121030 CGCCCACCGAAGCTCTTG 61.121 66.667 0.00 0.00 40.02 3.02
3097 5437 4.394712 CCGCCCACCGAAGCTCTT 62.395 66.667 0.00 0.00 40.02 2.85
3114 5454 4.910585 CATGGAGGTACCGCCCGC 62.911 72.222 29.48 7.77 42.61 6.13
3117 5457 4.564110 GGGCATGGAGGTACCGCC 62.564 72.222 26.59 26.59 42.10 6.13
3118 5458 4.910585 CGGGCATGGAGGTACCGC 62.911 72.222 7.18 7.18 42.61 5.68
3119 5459 4.235762 CCGGGCATGGAGGTACCG 62.236 72.222 6.18 0.00 43.89 4.02
3121 5461 2.504519 GACCGGGCATGGAGGTAC 59.495 66.667 0.00 0.00 38.57 3.34
3160 5500 4.803426 CTCCGCCGCACCTCAGAC 62.803 72.222 0.00 0.00 0.00 3.51
3173 5513 2.124901 TACCCAAATGCCGCTCCG 60.125 61.111 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.