Multiple sequence alignment - TraesCS7D01G343400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G343400 chr7D 100.000 3080 0 0 1 3080 439869650 439866571 0.000000e+00 5688.0
1 TraesCS7D01G343400 chr7D 85.714 644 80 7 992 1623 459427084 459426441 0.000000e+00 669.0
2 TraesCS7D01G343400 chr7D 80.641 811 94 27 948 1737 503291201 503291969 1.240000e-158 569.0
3 TraesCS7D01G343400 chr7D 85.143 525 69 6 948 1467 503738808 503739328 2.100000e-146 529.0
4 TraesCS7D01G343400 chr7D 95.925 319 10 3 2457 2773 277905188 277904871 5.890000e-142 514.0
5 TraesCS7D01G343400 chr7D 84.512 523 72 6 948 1467 503337990 503338506 2.740000e-140 508.0
6 TraesCS7D01G343400 chr7D 88.571 140 8 2 2873 3004 42156840 42156701 2.460000e-36 163.0
7 TraesCS7D01G343400 chr7D 87.770 139 10 1 2873 3004 591202014 591201876 4.110000e-34 156.0
8 TraesCS7D01G343400 chr7D 100.000 67 0 0 2774 2840 602191736 602191670 1.160000e-24 124.0
9 TraesCS7D01G343400 chr7D 97.143 70 2 0 2778 2847 635005379 635005310 5.400000e-23 119.0
10 TraesCS7D01G343400 chr7D 93.056 72 5 0 3009 3080 581389477 581389406 4.200000e-19 106.0
11 TraesCS7D01G343400 chr7D 88.000 75 8 1 107 181 611834840 611834913 1.520000e-13 87.9
12 TraesCS7D01G343400 chr7B 91.195 1590 71 14 926 2457 457531327 457529749 0.000000e+00 2097.0
13 TraesCS7D01G343400 chr7B 86.149 888 78 25 3 865 457532213 457531346 0.000000e+00 917.0
14 TraesCS7D01G343400 chr7B 84.130 523 76 5 948 1465 531816593 531817113 1.650000e-137 499.0
15 TraesCS7D01G343400 chr7B 88.664 247 18 4 2844 3080 457529755 457529509 3.000000e-75 292.0
16 TraesCS7D01G343400 chr7A 91.597 1190 68 15 987 2153 491260496 491259316 0.000000e+00 1615.0
17 TraesCS7D01G343400 chr7A 82.737 782 102 12 985 1738 540798181 540798957 0.000000e+00 665.0
18 TraesCS7D01G343400 chr7A 82.051 741 103 12 1022 1738 540871520 540872254 3.400000e-169 604.0
19 TraesCS7D01G343400 chr7A 84.743 544 65 9 992 1534 571363812 571364338 2.100000e-146 529.0
20 TraesCS7D01G343400 chr7A 83.626 513 43 17 386 865 491261105 491260601 7.840000e-121 444.0
21 TraesCS7D01G343400 chr7A 80.995 221 28 4 2873 3079 285577722 285577502 2.460000e-36 163.0
22 TraesCS7D01G343400 chr7A 74.873 394 45 28 1686 2025 540799139 540799532 2.490000e-26 130.0
23 TraesCS7D01G343400 chr2D 93.233 399 11 4 2457 2840 621490331 621490728 9.580000e-160 573.0
24 TraesCS7D01G343400 chr2D 95.342 322 12 3 2454 2773 18895971 18896291 2.740000e-140 508.0
25 TraesCS7D01G343400 chr2D 80.751 213 26 6 2873 3080 592778113 592778315 5.320000e-33 152.0
26 TraesCS7D01G343400 chr2D 97.101 69 1 1 2776 2843 151430927 151430995 6.980000e-22 115.0
27 TraesCS7D01G343400 chr2D 82.308 130 14 4 2956 3078 394052042 394051915 1.510000e-18 104.0
28 TraesCS7D01G343400 chr1D 92.040 402 14 7 2457 2840 486066541 486066140 1.610000e-152 549.0
29 TraesCS7D01G343400 chr1D 96.215 317 11 1 2457 2773 463949373 463949058 4.550000e-143 518.0
30 TraesCS7D01G343400 chr1D 95.925 319 9 4 2458 2773 339963673 339963990 5.890000e-142 514.0
31 TraesCS7D01G343400 chr1D 81.111 180 18 5 2917 3080 18050111 18049932 2.490000e-26 130.0
32 TraesCS7D01G343400 chr1D 100.000 67 0 0 2774 2840 440138552 440138618 1.160000e-24 124.0
33 TraesCS7D01G343400 chr1D 81.595 163 12 5 2935 3080 203869544 203869705 5.400000e-23 119.0
34 TraesCS7D01G343400 chr4D 92.267 375 16 6 2457 2822 345346710 345347080 1.270000e-143 520.0
35 TraesCS7D01G343400 chr4D 79.793 193 23 8 2904 3080 461222162 461221970 3.220000e-25 126.0
36 TraesCS7D01G343400 chr6D 95.597 318 12 2 2457 2773 133147747 133147431 2.740000e-140 508.0
37 TraesCS7D01G343400 chr6D 89.488 371 18 8 2497 2848 112953913 112953545 1.680000e-122 449.0
38 TraesCS7D01G343400 chr6B 88.804 393 34 6 2455 2840 685209413 685209024 1.000000e-129 473.0
39 TraesCS7D01G343400 chr6B 87.654 81 7 3 109 188 203896735 203896657 1.180000e-14 91.6
40 TraesCS7D01G343400 chr5D 86.266 233 15 5 2864 3080 409448524 409448293 1.430000e-58 237.0
41 TraesCS7D01G343400 chr5D 83.333 222 23 3 2873 3080 404471066 404470845 3.130000e-45 193.0
42 TraesCS7D01G343400 chr5D 82.511 223 23 8 2873 3079 7021709 7021487 6.780000e-42 182.0
43 TraesCS7D01G343400 chr5D 95.833 72 3 0 3009 3080 110351340 110351411 1.940000e-22 117.0
44 TraesCS7D01G343400 chr5D 93.056 72 5 0 3009 3080 486667758 486667687 4.200000e-19 106.0
45 TraesCS7D01G343400 chr5D 77.987 159 29 4 105 258 497024930 497024773 9.090000e-16 95.3
46 TraesCS7D01G343400 chr5D 81.356 118 15 3 107 224 530372698 530372808 4.230000e-14 89.8
47 TraesCS7D01G343400 chr3D 83.258 221 21 8 2873 3080 496345182 496345399 4.050000e-44 189.0
48 TraesCS7D01G343400 chr3D 78.603 229 26 12 2872 3080 84886020 84886245 2.490000e-26 130.0
49 TraesCS7D01G343400 chr3D 98.529 68 1 0 2774 2841 356953453 356953386 1.500000e-23 121.0
50 TraesCS7D01G343400 chr3D 97.183 71 1 1 2776 2846 23783521 23783452 5.400000e-23 119.0
51 TraesCS7D01G343400 chr3B 81.739 230 25 7 2866 3080 449019009 449018782 3.160000e-40 176.0
52 TraesCS7D01G343400 chr5A 83.871 124 17 3 105 227 28756661 28756540 6.980000e-22 115.0
53 TraesCS7D01G343400 chr5A 97.059 34 1 0 106 139 621361585 621361552 1.190000e-04 58.4
54 TraesCS7D01G343400 chr5A 87.755 49 6 0 1533 1581 669579805 669579853 1.190000e-04 58.4
55 TraesCS7D01G343400 chr3A 79.775 178 17 8 2921 3079 345578940 345579117 9.030000e-21 111.0
56 TraesCS7D01G343400 chr1B 78.571 154 28 4 106 258 265662577 265662726 2.530000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G343400 chr7D 439866571 439869650 3079 True 5688.0 5688 100.000000 1 3080 1 chr7D.!!$R3 3079
1 TraesCS7D01G343400 chr7D 459426441 459427084 643 True 669.0 669 85.714000 992 1623 1 chr7D.!!$R4 631
2 TraesCS7D01G343400 chr7D 503291201 503291969 768 False 569.0 569 80.641000 948 1737 1 chr7D.!!$F1 789
3 TraesCS7D01G343400 chr7D 503738808 503739328 520 False 529.0 529 85.143000 948 1467 1 chr7D.!!$F3 519
4 TraesCS7D01G343400 chr7D 503337990 503338506 516 False 508.0 508 84.512000 948 1467 1 chr7D.!!$F2 519
5 TraesCS7D01G343400 chr7B 457529509 457532213 2704 True 1102.0 2097 88.669333 3 3080 3 chr7B.!!$R1 3077
6 TraesCS7D01G343400 chr7B 531816593 531817113 520 False 499.0 499 84.130000 948 1465 1 chr7B.!!$F1 517
7 TraesCS7D01G343400 chr7A 491259316 491261105 1789 True 1029.5 1615 87.611500 386 2153 2 chr7A.!!$R2 1767
8 TraesCS7D01G343400 chr7A 540871520 540872254 734 False 604.0 604 82.051000 1022 1738 1 chr7A.!!$F1 716
9 TraesCS7D01G343400 chr7A 571363812 571364338 526 False 529.0 529 84.743000 992 1534 1 chr7A.!!$F2 542
10 TraesCS7D01G343400 chr7A 540798181 540799532 1351 False 397.5 665 78.805000 985 2025 2 chr7A.!!$F3 1040

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
891 958 0.038159 GAGCCAACGGGATCGGATAG 60.038 60.0 0.0 0.0 40.28 2.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2605 3072 0.107654 GCCACGCCTTCTAGGAATGT 60.108 55.0 0.0 0.0 37.67 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 2.927014 GCCGGCGATCATTTAGACTAGG 60.927 54.545 12.58 0.00 0.00 3.02
94 98 8.950208 ATCAGCTATAGTTTAGTTTCCTCAAC 57.050 34.615 0.84 0.00 35.32 3.18
136 140 9.061610 GTTTAGTTGAAATATGTCCGAAATGTG 57.938 33.333 0.00 0.00 0.00 3.21
170 174 7.241663 TGTCCGGTTTAGATAAAAATCATCG 57.758 36.000 0.00 0.00 0.00 3.84
171 175 6.259167 TGTCCGGTTTAGATAAAAATCATCGG 59.741 38.462 0.00 0.00 0.00 4.18
173 177 5.529800 CCGGTTTAGATAAAAATCATCGGGT 59.470 40.000 0.00 0.00 0.00 5.28
187 191 3.064682 TCATCGGGTTTGCATGTTATTCG 59.935 43.478 0.00 0.00 0.00 3.34
190 194 3.120130 TCGGGTTTGCATGTTATTCGTTC 60.120 43.478 0.00 0.00 0.00 3.95
205 209 9.771915 TGTTATTCGTTCGGTTTATTTAAATCC 57.228 29.630 3.39 0.00 0.00 3.01
211 215 6.412653 CGTTCGGTTTATTTAAATCCGGATTG 59.587 38.462 29.84 13.24 38.81 2.67
222 227 4.488126 AATCCGGATTGAAATGTATGCG 57.512 40.909 28.72 0.00 35.69 4.73
223 228 2.686558 CCGGATTGAAATGTATGCGG 57.313 50.000 0.00 0.00 46.60 5.69
228 233 4.611355 CGGATTGAAATGTATGCGGACATC 60.611 45.833 3.96 0.00 39.16 3.06
229 234 4.516698 GGATTGAAATGTATGCGGACATCT 59.483 41.667 3.96 0.00 39.16 2.90
239 244 3.627395 TGCGGACATCTTTGGATTACT 57.373 42.857 0.00 0.00 0.00 2.24
245 250 3.879892 GACATCTTTGGATTACTGGCTCC 59.120 47.826 0.00 0.00 0.00 4.70
246 251 3.217626 CATCTTTGGATTACTGGCTCCC 58.782 50.000 0.00 0.00 0.00 4.30
253 258 2.288886 GGATTACTGGCTCCCGTATCAC 60.289 54.545 0.00 0.00 0.00 3.06
258 263 0.613572 TGGCTCCCGTATCACTGTCA 60.614 55.000 0.00 0.00 0.00 3.58
267 272 2.055838 GTATCACTGTCAACGAACGCA 58.944 47.619 0.00 0.00 0.00 5.24
293 298 0.385751 CGCGTCCATGGACAGATACT 59.614 55.000 37.42 0.00 44.77 2.12
298 303 3.735208 CGTCCATGGACAGATACTGTGTC 60.735 52.174 37.42 12.13 45.44 3.67
315 320 2.599082 GTGTCCGATTTAAGAGTCTGCG 59.401 50.000 0.00 0.00 0.00 5.18
316 321 2.230508 TGTCCGATTTAAGAGTCTGCGT 59.769 45.455 0.00 0.00 0.00 5.24
317 322 3.251571 GTCCGATTTAAGAGTCTGCGTT 58.748 45.455 0.00 0.00 0.00 4.84
319 324 4.860907 GTCCGATTTAAGAGTCTGCGTTAA 59.139 41.667 0.00 0.00 0.00 2.01
320 325 5.346822 GTCCGATTTAAGAGTCTGCGTTAAA 59.653 40.000 0.00 0.00 31.90 1.52
321 326 5.575606 TCCGATTTAAGAGTCTGCGTTAAAG 59.424 40.000 0.00 0.00 31.10 1.85
322 327 5.575606 CCGATTTAAGAGTCTGCGTTAAAGA 59.424 40.000 0.00 0.00 31.10 2.52
323 328 6.453922 CCGATTTAAGAGTCTGCGTTAAAGAC 60.454 42.308 0.00 0.00 43.66 3.01
358 363 6.086222 CGTGTCTGAAATTCACCCTAAATTG 58.914 40.000 0.00 0.00 0.00 2.32
359 364 5.863935 GTGTCTGAAATTCACCCTAAATTGC 59.136 40.000 0.00 0.00 0.00 3.56
369 374 6.861065 TCACCCTAAATTGCTCGAATTATC 57.139 37.500 0.00 0.00 32.76 1.75
370 375 5.763204 TCACCCTAAATTGCTCGAATTATCC 59.237 40.000 0.00 0.00 32.76 2.59
413 420 1.410517 GCTAGCTGAGCCTGATACACA 59.589 52.381 7.70 0.00 46.41 3.72
426 433 2.498078 TGATACACAAGCACCGGTCATA 59.502 45.455 2.59 0.00 0.00 2.15
439 446 1.931172 CGGTCATAGCCGTACCAAAAG 59.069 52.381 0.00 0.00 46.11 2.27
483 499 3.602483 GTGCCAAGTAGAAACCGGATTA 58.398 45.455 9.46 0.00 0.00 1.75
613 636 2.996631 AGCAAGCATCACCTTCCTTAG 58.003 47.619 0.00 0.00 0.00 2.18
627 650 6.488683 CACCTTCCTTAGTTTGGTTAATCACA 59.511 38.462 0.00 0.00 0.00 3.58
651 674 4.910585 CGCCTTAATCCGCGCCCT 62.911 66.667 0.00 0.00 42.17 5.19
652 675 2.973052 GCCTTAATCCGCGCCCTC 60.973 66.667 0.00 0.00 0.00 4.30
653 676 2.504032 CCTTAATCCGCGCCCTCA 59.496 61.111 0.00 0.00 0.00 3.86
654 677 1.153249 CCTTAATCCGCGCCCTCAA 60.153 57.895 0.00 0.00 0.00 3.02
655 678 0.746563 CCTTAATCCGCGCCCTCAAA 60.747 55.000 0.00 0.00 0.00 2.69
656 679 1.091537 CTTAATCCGCGCCCTCAAAA 58.908 50.000 0.00 0.00 0.00 2.44
657 680 1.470890 CTTAATCCGCGCCCTCAAAAA 59.529 47.619 0.00 0.00 0.00 1.94
689 715 1.031571 TTTCCGCAGCTAATGGCAGG 61.032 55.000 0.00 0.00 44.79 4.85
756 784 6.560253 AATGCAAGATTACGGGCTTAATAG 57.440 37.500 0.00 0.00 0.00 1.73
890 957 2.046938 GAGCCAACGGGATCGGATA 58.953 57.895 0.00 0.00 40.28 2.59
891 958 0.038159 GAGCCAACGGGATCGGATAG 60.038 60.000 0.00 0.00 40.28 2.08
892 959 0.469331 AGCCAACGGGATCGGATAGA 60.469 55.000 0.00 0.00 41.39 1.98
894 961 1.605712 GCCAACGGGATCGGATAGAAG 60.606 57.143 0.00 0.00 41.39 2.85
895 962 1.000955 CCAACGGGATCGGATAGAAGG 59.999 57.143 0.00 0.00 41.39 3.46
896 963 1.961394 CAACGGGATCGGATAGAAGGA 59.039 52.381 0.00 0.00 41.39 3.36
897 964 1.912417 ACGGGATCGGATAGAAGGAG 58.088 55.000 0.00 0.00 41.39 3.69
898 965 1.178276 CGGGATCGGATAGAAGGAGG 58.822 60.000 0.00 0.00 0.00 4.30
899 966 0.899019 GGGATCGGATAGAAGGAGGC 59.101 60.000 0.00 0.00 0.00 4.70
900 967 0.899019 GGATCGGATAGAAGGAGGCC 59.101 60.000 0.00 0.00 0.00 5.19
901 968 1.633774 GATCGGATAGAAGGAGGCCA 58.366 55.000 5.01 0.00 0.00 5.36
902 969 1.548269 GATCGGATAGAAGGAGGCCAG 59.452 57.143 5.01 0.00 0.00 4.85
903 970 1.115930 TCGGATAGAAGGAGGCCAGC 61.116 60.000 5.01 0.00 0.00 4.85
904 971 1.757949 GGATAGAAGGAGGCCAGCC 59.242 63.158 5.01 5.93 0.00 4.85
905 972 1.056700 GGATAGAAGGAGGCCAGCCA 61.057 60.000 16.09 0.00 38.92 4.75
906 973 0.396060 GATAGAAGGAGGCCAGCCAG 59.604 60.000 16.09 0.00 38.92 4.85
907 974 1.704007 ATAGAAGGAGGCCAGCCAGC 61.704 60.000 16.09 7.80 38.92 4.85
908 975 4.039092 GAAGGAGGCCAGCCAGCA 62.039 66.667 16.09 0.00 38.92 4.41
909 976 3.574074 GAAGGAGGCCAGCCAGCAA 62.574 63.158 16.09 0.00 38.92 3.91
910 977 2.850828 GAAGGAGGCCAGCCAGCAAT 62.851 60.000 16.09 0.00 38.92 3.56
911 978 3.145551 GGAGGCCAGCCAGCAATG 61.146 66.667 12.03 0.00 38.92 2.82
912 979 2.362120 GAGGCCAGCCAGCAATGT 60.362 61.111 12.03 0.00 38.92 2.71
913 980 1.077501 GAGGCCAGCCAGCAATGTA 60.078 57.895 12.03 0.00 38.92 2.29
914 981 1.077212 AGGCCAGCCAGCAATGTAG 60.077 57.895 12.03 0.00 38.92 2.74
915 982 1.077501 GGCCAGCCAGCAATGTAGA 60.078 57.895 3.12 0.00 35.81 2.59
916 983 1.099879 GGCCAGCCAGCAATGTAGAG 61.100 60.000 3.12 0.00 35.81 2.43
917 984 1.099879 GCCAGCCAGCAATGTAGAGG 61.100 60.000 0.00 0.00 0.00 3.69
918 985 1.099879 CCAGCCAGCAATGTAGAGGC 61.100 60.000 0.00 0.00 45.54 4.70
919 986 4.972875 GCCAGCAATGTAGAGGCT 57.027 55.556 0.00 0.00 42.01 4.58
920 987 2.700329 GCCAGCAATGTAGAGGCTC 58.300 57.895 6.34 6.34 42.01 4.70
921 988 1.156645 GCCAGCAATGTAGAGGCTCG 61.157 60.000 9.22 0.00 42.01 5.03
922 989 0.176680 CCAGCAATGTAGAGGCTCGT 59.823 55.000 9.22 0.15 35.27 4.18
923 990 1.565305 CAGCAATGTAGAGGCTCGTC 58.435 55.000 9.22 6.93 35.27 4.20
924 991 1.134995 CAGCAATGTAGAGGCTCGTCA 60.135 52.381 9.22 12.48 35.27 4.35
925 992 1.135915 AGCAATGTAGAGGCTCGTCAG 59.864 52.381 9.22 3.37 30.74 3.51
926 993 1.565305 CAATGTAGAGGCTCGTCAGC 58.435 55.000 9.22 0.00 46.06 4.26
942 1009 2.746277 GCAACGAGCCAACGGGAT 60.746 61.111 0.00 0.00 37.23 3.85
943 1010 3.039202 GCAACGAGCCAACGGGATG 62.039 63.158 0.00 0.00 37.23 3.51
944 1011 2.046314 AACGAGCCAACGGGATGG 60.046 61.111 0.00 0.24 43.70 3.51
945 1012 2.589157 AACGAGCCAACGGGATGGA 61.589 57.895 8.18 0.00 43.54 3.41
946 1013 2.119484 AACGAGCCAACGGGATGGAA 62.119 55.000 8.18 0.00 43.54 3.53
1107 1205 3.325753 AAGGCCAAGGAGCTCGCT 61.326 61.111 5.01 3.11 0.00 4.93
1581 1703 4.388499 ATGGACGTCGCCGGCTTT 62.388 61.111 26.68 5.11 43.49 3.51
1639 1776 2.140792 GGCCTGCTCGGGGAAGATA 61.141 63.158 0.00 0.00 0.00 1.98
1994 2423 3.222855 CCCCGGCACAAGCACAAA 61.223 61.111 0.00 0.00 44.61 2.83
2096 2525 7.834681 TCTCCACTAGACTAGTATTGTTGTCAT 59.165 37.037 14.79 0.00 37.23 3.06
2192 2645 5.437289 TGATTCTCACGCATTTGAAGTTT 57.563 34.783 0.00 0.00 0.00 2.66
2193 2646 6.552859 TGATTCTCACGCATTTGAAGTTTA 57.447 33.333 0.00 0.00 0.00 2.01
2238 2691 4.264623 TGGGTAATTCCAGTTTTATGCCCT 60.265 41.667 0.00 0.00 38.11 5.19
2248 2701 6.268847 TCCAGTTTTATGCCCTATGTTTTTGT 59.731 34.615 0.00 0.00 0.00 2.83
2282 2749 5.947228 ACAGGATTACACAGTTTGTCATG 57.053 39.130 0.00 0.00 39.91 3.07
2313 2780 3.552684 CCATTTGGTGTAAGTTGTGCCAG 60.553 47.826 0.00 0.00 0.00 4.85
2351 2818 7.886191 TTTTCGTTTTGAACTTATTCTGTCG 57.114 32.000 0.00 0.00 35.97 4.35
2369 2836 1.060713 CGTGTTGCTCCTAGTTGTCG 58.939 55.000 0.00 0.00 0.00 4.35
2371 2838 0.320421 TGTTGCTCCTAGTTGTCGGC 60.320 55.000 0.00 0.00 0.00 5.54
2397 2864 1.718757 GCAAAGGCATAGCTGACCCG 61.719 60.000 0.00 0.00 40.72 5.28
2407 2874 1.889573 GCTGACCCGCAAGCTATCC 60.890 63.158 0.00 0.00 0.00 2.59
2411 2878 1.510480 GACCCGCAAGCTATCCATGC 61.510 60.000 0.00 0.00 36.74 4.06
2449 2916 8.119845 GCGTGGAAAATGTTTAAAAATGAAAGT 58.880 29.630 0.00 0.00 0.00 2.66
2461 2928 9.667989 TTTAAAAATGAAAGTAAACTAGGACGC 57.332 29.630 0.00 0.00 0.00 5.19
2462 2929 5.526010 AAATGAAAGTAAACTAGGACGCG 57.474 39.130 3.53 3.53 0.00 6.01
2463 2930 2.950433 TGAAAGTAAACTAGGACGCGG 58.050 47.619 12.47 0.00 0.00 6.46
2464 2931 1.657594 GAAAGTAAACTAGGACGCGGC 59.342 52.381 12.47 7.53 0.00 6.53
2465 2932 0.893447 AAGTAAACTAGGACGCGGCT 59.107 50.000 13.91 0.00 0.00 5.52
2466 2933 1.755179 AGTAAACTAGGACGCGGCTA 58.245 50.000 13.91 0.74 0.00 3.93
2467 2934 2.094675 AGTAAACTAGGACGCGGCTAA 58.905 47.619 13.91 0.00 0.00 3.09
2468 2935 2.692041 AGTAAACTAGGACGCGGCTAAT 59.308 45.455 13.91 0.00 0.00 1.73
2469 2936 2.220479 AAACTAGGACGCGGCTAATC 57.780 50.000 13.91 0.00 0.00 1.75
2470 2937 1.400737 AACTAGGACGCGGCTAATCT 58.599 50.000 13.91 1.91 0.00 2.40
2471 2938 0.669077 ACTAGGACGCGGCTAATCTG 59.331 55.000 13.91 0.00 0.00 2.90
2472 2939 0.664767 CTAGGACGCGGCTAATCTGC 60.665 60.000 13.91 0.00 43.66 4.26
2473 2940 1.107538 TAGGACGCGGCTAATCTGCT 61.108 55.000 13.91 0.00 44.92 4.24
2474 2941 1.951631 GGACGCGGCTAATCTGCTC 60.952 63.158 13.91 0.00 44.92 4.26
2475 2942 1.951631 GACGCGGCTAATCTGCTCC 60.952 63.158 12.47 0.00 44.92 4.70
2476 2943 2.663188 CGCGGCTAATCTGCTCCC 60.663 66.667 0.00 0.00 44.92 4.30
2477 2944 2.663188 GCGGCTAATCTGCTCCCG 60.663 66.667 0.00 0.00 43.74 5.14
2478 2945 3.129300 CGGCTAATCTGCTCCCGA 58.871 61.111 0.00 0.00 41.34 5.14
2479 2946 1.006805 CGGCTAATCTGCTCCCGAG 60.007 63.158 0.00 0.00 41.34 4.63
2498 2965 2.024176 GCTTAAATGAGCTCGGGTGA 57.976 50.000 9.64 0.00 39.57 4.02
2499 2966 2.356135 GCTTAAATGAGCTCGGGTGAA 58.644 47.619 9.64 0.00 39.57 3.18
2500 2967 2.096013 GCTTAAATGAGCTCGGGTGAAC 59.904 50.000 9.64 0.00 39.57 3.18
2501 2968 2.396590 TAAATGAGCTCGGGTGAACC 57.603 50.000 9.64 0.00 0.00 3.62
2515 2982 5.190992 GGGTGAACCGTAAAATCAAAACT 57.809 39.130 0.00 0.00 36.71 2.66
2516 2983 6.316440 GGGTGAACCGTAAAATCAAAACTA 57.684 37.500 0.00 0.00 36.71 2.24
2517 2984 6.737118 GGGTGAACCGTAAAATCAAAACTAA 58.263 36.000 0.00 0.00 36.71 2.24
2518 2985 7.201835 GGGTGAACCGTAAAATCAAAACTAAA 58.798 34.615 0.00 0.00 36.71 1.85
2519 2986 7.868922 GGGTGAACCGTAAAATCAAAACTAAAT 59.131 33.333 0.00 0.00 36.71 1.40
2520 2987 8.908678 GGTGAACCGTAAAATCAAAACTAAATC 58.091 33.333 0.00 0.00 0.00 2.17
2521 2988 9.453325 GTGAACCGTAAAATCAAAACTAAATCA 57.547 29.630 0.00 0.00 0.00 2.57
2579 3046 9.178758 AGAGAAACATTGACAAAAGTTCTAAGT 57.821 29.630 9.09 0.00 0.00 2.24
2580 3047 9.226345 GAGAAACATTGACAAAAGTTCTAAGTG 57.774 33.333 9.09 0.00 0.00 3.16
2581 3048 7.702348 AGAAACATTGACAAAAGTTCTAAGTGC 59.298 33.333 9.09 0.00 0.00 4.40
2582 3049 5.831997 ACATTGACAAAAGTTCTAAGTGCC 58.168 37.500 0.00 0.00 0.00 5.01
2583 3050 5.594317 ACATTGACAAAAGTTCTAAGTGCCT 59.406 36.000 0.00 0.00 0.00 4.75
2584 3051 5.499139 TTGACAAAAGTTCTAAGTGCCTG 57.501 39.130 0.00 0.00 0.00 4.85
2585 3052 3.315191 TGACAAAAGTTCTAAGTGCCTGC 59.685 43.478 0.00 0.00 0.00 4.85
2586 3053 3.287222 ACAAAAGTTCTAAGTGCCTGCA 58.713 40.909 0.00 0.00 0.00 4.41
2587 3054 3.699038 ACAAAAGTTCTAAGTGCCTGCAA 59.301 39.130 0.00 0.00 0.00 4.08
2588 3055 4.159506 ACAAAAGTTCTAAGTGCCTGCAAA 59.840 37.500 0.00 0.00 0.00 3.68
2589 3056 5.108517 CAAAAGTTCTAAGTGCCTGCAAAA 58.891 37.500 0.00 0.00 0.00 2.44
2590 3057 5.337578 AAAGTTCTAAGTGCCTGCAAAAA 57.662 34.783 0.00 0.00 0.00 1.94
2591 3058 5.535753 AAGTTCTAAGTGCCTGCAAAAAT 57.464 34.783 0.00 0.00 0.00 1.82
2592 3059 5.535753 AGTTCTAAGTGCCTGCAAAAATT 57.464 34.783 0.00 0.00 0.00 1.82
2593 3060 5.532557 AGTTCTAAGTGCCTGCAAAAATTC 58.467 37.500 0.00 0.00 0.00 2.17
2594 3061 4.159377 TCTAAGTGCCTGCAAAAATTCG 57.841 40.909 0.00 0.00 0.00 3.34
2595 3062 2.888834 AAGTGCCTGCAAAAATTCGT 57.111 40.000 0.00 0.00 0.00 3.85
2596 3063 2.422276 AGTGCCTGCAAAAATTCGTC 57.578 45.000 0.00 0.00 0.00 4.20
2597 3064 1.680735 AGTGCCTGCAAAAATTCGTCA 59.319 42.857 0.00 0.00 0.00 4.35
2598 3065 2.297033 AGTGCCTGCAAAAATTCGTCAT 59.703 40.909 0.00 0.00 0.00 3.06
2599 3066 2.409378 GTGCCTGCAAAAATTCGTCATG 59.591 45.455 0.00 0.00 0.00 3.07
2600 3067 2.295629 TGCCTGCAAAAATTCGTCATGA 59.704 40.909 0.00 0.00 0.00 3.07
2601 3068 3.243670 TGCCTGCAAAAATTCGTCATGAA 60.244 39.130 0.00 0.00 41.81 2.57
2602 3069 3.740321 GCCTGCAAAAATTCGTCATGAAA 59.260 39.130 0.00 0.00 40.71 2.69
2603 3070 4.389687 GCCTGCAAAAATTCGTCATGAAAT 59.610 37.500 0.00 0.00 40.71 2.17
2604 3071 5.445010 GCCTGCAAAAATTCGTCATGAAATC 60.445 40.000 0.00 0.00 40.71 2.17
2605 3072 5.634439 CCTGCAAAAATTCGTCATGAAATCA 59.366 36.000 0.00 0.00 40.71 2.57
2606 3073 6.400303 CCTGCAAAAATTCGTCATGAAATCAC 60.400 38.462 0.00 0.00 40.71 3.06
2607 3074 5.981915 TGCAAAAATTCGTCATGAAATCACA 59.018 32.000 0.00 0.00 40.71 3.58
2608 3075 6.645827 TGCAAAAATTCGTCATGAAATCACAT 59.354 30.769 0.00 0.00 40.71 3.21
2609 3076 7.171167 TGCAAAAATTCGTCATGAAATCACATT 59.829 29.630 0.00 0.00 40.71 2.71
2610 3077 7.685304 GCAAAAATTCGTCATGAAATCACATTC 59.315 33.333 0.00 0.00 40.71 2.67
2611 3078 7.816945 AAAATTCGTCATGAAATCACATTCC 57.183 32.000 0.00 0.00 40.71 3.01
2612 3079 6.764308 AATTCGTCATGAAATCACATTCCT 57.236 33.333 0.00 0.00 40.71 3.36
2613 3080 7.864108 AATTCGTCATGAAATCACATTCCTA 57.136 32.000 0.00 0.00 40.71 2.94
2614 3081 6.908870 TTCGTCATGAAATCACATTCCTAG 57.091 37.500 0.00 0.00 32.37 3.02
2615 3082 6.220726 TCGTCATGAAATCACATTCCTAGA 57.779 37.500 0.00 0.00 0.00 2.43
2616 3083 6.639563 TCGTCATGAAATCACATTCCTAGAA 58.360 36.000 0.00 0.00 0.00 2.10
2617 3084 6.758416 TCGTCATGAAATCACATTCCTAGAAG 59.242 38.462 0.00 0.00 0.00 2.85
2618 3085 6.018425 CGTCATGAAATCACATTCCTAGAAGG 60.018 42.308 0.00 0.00 36.46 3.46
2619 3086 5.824624 TCATGAAATCACATTCCTAGAAGGC 59.175 40.000 0.00 0.00 34.61 4.35
2620 3087 4.191544 TGAAATCACATTCCTAGAAGGCG 58.808 43.478 0.00 0.00 34.61 5.52
2621 3088 3.914426 AATCACATTCCTAGAAGGCGT 57.086 42.857 0.00 0.00 34.61 5.68
2622 3089 2.672961 TCACATTCCTAGAAGGCGTG 57.327 50.000 0.00 0.00 34.61 5.34
2623 3090 1.207089 TCACATTCCTAGAAGGCGTGG 59.793 52.381 0.00 0.00 34.61 4.94
2624 3091 0.107654 ACATTCCTAGAAGGCGTGGC 60.108 55.000 0.00 0.00 34.61 5.01
2625 3092 0.107703 CATTCCTAGAAGGCGTGGCA 60.108 55.000 0.00 0.00 34.61 4.92
2626 3093 0.618458 ATTCCTAGAAGGCGTGGCAA 59.382 50.000 0.00 0.00 34.61 4.52
2627 3094 0.398696 TTCCTAGAAGGCGTGGCAAA 59.601 50.000 0.00 0.00 34.61 3.68
2628 3095 0.398696 TCCTAGAAGGCGTGGCAAAA 59.601 50.000 0.00 0.00 34.61 2.44
2629 3096 1.202830 TCCTAGAAGGCGTGGCAAAAA 60.203 47.619 0.00 0.00 34.61 1.94
2655 3122 7.812309 AACAAAAACAGTACTCTGAAAAAGC 57.188 32.000 0.00 0.00 43.76 3.51
2656 3123 7.158099 ACAAAAACAGTACTCTGAAAAAGCT 57.842 32.000 0.00 0.00 43.76 3.74
2657 3124 8.276252 ACAAAAACAGTACTCTGAAAAAGCTA 57.724 30.769 0.00 0.00 43.76 3.32
2658 3125 8.182227 ACAAAAACAGTACTCTGAAAAAGCTAC 58.818 33.333 0.00 0.00 43.76 3.58
2659 3126 8.398665 CAAAAACAGTACTCTGAAAAAGCTACT 58.601 33.333 0.00 0.00 43.76 2.57
2660 3127 8.507524 AAAACAGTACTCTGAAAAAGCTACTT 57.492 30.769 0.00 0.00 43.76 2.24
2661 3128 8.507524 AAACAGTACTCTGAAAAAGCTACTTT 57.492 30.769 0.00 0.00 43.76 2.66
2662 3129 7.716768 ACAGTACTCTGAAAAAGCTACTTTC 57.283 36.000 12.26 12.26 43.76 2.62
2663 3130 7.272978 ACAGTACTCTGAAAAAGCTACTTTCA 58.727 34.615 18.13 18.13 43.76 2.69
2664 3131 7.769044 ACAGTACTCTGAAAAAGCTACTTTCAA 59.231 33.333 19.14 12.10 41.10 2.69
2665 3132 8.612619 CAGTACTCTGAAAAAGCTACTTTCAAA 58.387 33.333 19.14 9.92 41.10 2.69
2666 3133 8.613482 AGTACTCTGAAAAAGCTACTTTCAAAC 58.387 33.333 19.14 15.25 41.10 2.93
2667 3134 6.487103 ACTCTGAAAAAGCTACTTTCAAACG 58.513 36.000 19.14 14.03 41.10 3.60
2668 3135 5.270853 TCTGAAAAAGCTACTTTCAAACGC 58.729 37.500 19.14 0.00 41.10 4.84
2669 3136 4.987832 TGAAAAAGCTACTTTCAAACGCA 58.012 34.783 17.31 0.00 39.28 5.24
2670 3137 5.587289 TGAAAAAGCTACTTTCAAACGCAT 58.413 33.333 17.31 0.00 39.28 4.73
2671 3138 6.039616 TGAAAAAGCTACTTTCAAACGCATT 58.960 32.000 17.31 0.00 39.28 3.56
2672 3139 6.533367 TGAAAAAGCTACTTTCAAACGCATTT 59.467 30.769 17.31 0.00 39.28 2.32
2673 3140 6.902224 AAAAGCTACTTTCAAACGCATTTT 57.098 29.167 0.00 0.00 31.99 1.82
2674 3141 5.888412 AAGCTACTTTCAAACGCATTTTG 57.112 34.783 0.00 2.03 45.38 2.44
2682 3149 3.492725 CAAACGCATTTTGAAGCACTG 57.507 42.857 2.24 0.00 46.76 3.66
2683 3150 3.114809 CAAACGCATTTTGAAGCACTGA 58.885 40.909 2.24 0.00 46.76 3.41
2684 3151 3.435105 AACGCATTTTGAAGCACTGAA 57.565 38.095 0.00 0.00 0.00 3.02
2685 3152 3.648339 ACGCATTTTGAAGCACTGAAT 57.352 38.095 0.00 0.00 0.00 2.57
2686 3153 3.981211 ACGCATTTTGAAGCACTGAATT 58.019 36.364 0.00 0.00 0.00 2.17
2687 3154 4.370917 ACGCATTTTGAAGCACTGAATTT 58.629 34.783 0.00 0.00 0.00 1.82
2688 3155 4.209703 ACGCATTTTGAAGCACTGAATTTG 59.790 37.500 0.00 0.00 0.00 2.32
2689 3156 4.209703 CGCATTTTGAAGCACTGAATTTGT 59.790 37.500 0.00 0.00 0.00 2.83
2690 3157 5.276963 CGCATTTTGAAGCACTGAATTTGTT 60.277 36.000 0.00 0.00 0.00 2.83
2691 3158 6.488817 GCATTTTGAAGCACTGAATTTGTTT 58.511 32.000 0.00 0.00 0.00 2.83
2692 3159 6.968335 GCATTTTGAAGCACTGAATTTGTTTT 59.032 30.769 0.00 0.00 0.00 2.43
2693 3160 7.485595 GCATTTTGAAGCACTGAATTTGTTTTT 59.514 29.630 0.00 0.00 0.00 1.94
2711 3178 0.671251 TTTTTGCCACGCCTTACAGG 59.329 50.000 0.00 0.00 38.80 4.00
2712 3179 0.179015 TTTTGCCACGCCTTACAGGA 60.179 50.000 0.00 0.00 37.67 3.86
2713 3180 0.179015 TTTGCCACGCCTTACAGGAA 60.179 50.000 0.00 0.00 37.67 3.36
2714 3181 0.037590 TTGCCACGCCTTACAGGAAT 59.962 50.000 0.00 0.00 37.67 3.01
2715 3182 0.676466 TGCCACGCCTTACAGGAATG 60.676 55.000 0.00 0.00 37.67 2.67
2716 3183 0.676782 GCCACGCCTTACAGGAATGT 60.677 55.000 0.00 0.00 37.67 2.71
2717 3184 1.086696 CCACGCCTTACAGGAATGTG 58.913 55.000 0.00 0.00 37.67 3.21
2718 3185 1.338674 CCACGCCTTACAGGAATGTGA 60.339 52.381 10.25 0.00 37.67 3.58
2719 3186 2.632377 CACGCCTTACAGGAATGTGAT 58.368 47.619 0.00 0.00 37.67 3.06
2720 3187 3.009723 CACGCCTTACAGGAATGTGATT 58.990 45.455 0.00 0.00 37.67 2.57
2721 3188 3.440173 CACGCCTTACAGGAATGTGATTT 59.560 43.478 0.00 0.00 37.67 2.17
2722 3189 3.689649 ACGCCTTACAGGAATGTGATTTC 59.310 43.478 0.00 0.00 37.67 2.17
2723 3190 3.689161 CGCCTTACAGGAATGTGATTTCA 59.311 43.478 0.00 0.00 37.67 2.69
2724 3191 4.336433 CGCCTTACAGGAATGTGATTTCAT 59.664 41.667 0.00 0.00 37.67 2.57
2725 3192 5.585390 GCCTTACAGGAATGTGATTTCATG 58.415 41.667 0.00 0.00 41.77 3.07
2726 3193 5.357878 GCCTTACAGGAATGTGATTTCATGA 59.642 40.000 5.92 0.00 39.18 3.07
2727 3194 6.040166 GCCTTACAGGAATGTGATTTCATGAT 59.960 38.462 0.00 0.00 39.18 2.45
2728 3195 7.423199 CCTTACAGGAATGTGATTTCATGATG 58.577 38.462 0.00 0.00 39.18 3.07
2729 3196 7.283807 CCTTACAGGAATGTGATTTCATGATGA 59.716 37.037 0.00 0.00 39.18 2.92
2730 3197 8.578448 TTACAGGAATGTGATTTCATGATGAA 57.422 30.769 3.29 3.29 39.18 2.57
2731 3198 7.655521 ACAGGAATGTGATTTCATGATGAAT 57.344 32.000 8.90 0.00 39.18 2.57
2732 3199 8.074613 ACAGGAATGTGATTTCATGATGAATT 57.925 30.769 8.90 5.47 39.18 2.17
2733 3200 8.537016 ACAGGAATGTGATTTCATGATGAATTT 58.463 29.630 8.90 0.00 39.18 1.82
2734 3201 9.378551 CAGGAATGTGATTTCATGATGAATTTT 57.621 29.630 8.90 0.00 39.18 1.82
2735 3202 9.953565 AGGAATGTGATTTCATGATGAATTTTT 57.046 25.926 8.90 0.00 36.11 1.94
2736 3203 9.982291 GGAATGTGATTTCATGATGAATTTTTG 57.018 29.630 8.90 0.00 36.11 2.44
2737 3204 9.485591 GAATGTGATTTCATGATGAATTTTTGC 57.514 29.630 8.90 0.00 36.11 3.68
2738 3205 7.964604 TGTGATTTCATGATGAATTTTTGCA 57.035 28.000 8.90 1.87 36.11 4.08
2739 3206 8.024146 TGTGATTTCATGATGAATTTTTGCAG 57.976 30.769 8.90 0.00 36.11 4.41
2740 3207 7.118535 TGTGATTTCATGATGAATTTTTGCAGG 59.881 33.333 8.90 0.00 36.11 4.85
2741 3208 5.866335 TTTCATGATGAATTTTTGCAGGC 57.134 34.783 8.90 0.00 36.11 4.85
2742 3209 4.538746 TCATGATGAATTTTTGCAGGCA 57.461 36.364 0.00 0.00 0.00 4.75
2743 3210 4.247258 TCATGATGAATTTTTGCAGGCAC 58.753 39.130 0.00 0.00 0.00 5.01
2744 3211 4.020928 TCATGATGAATTTTTGCAGGCACT 60.021 37.500 0.00 0.00 43.88 4.40
2745 3212 4.339872 TGATGAATTTTTGCAGGCACTT 57.660 36.364 0.00 0.00 34.60 3.16
2746 3213 5.465532 TGATGAATTTTTGCAGGCACTTA 57.534 34.783 0.00 0.00 34.60 2.24
2747 3214 5.472148 TGATGAATTTTTGCAGGCACTTAG 58.528 37.500 0.00 0.00 34.60 2.18
2748 3215 5.243507 TGATGAATTTTTGCAGGCACTTAGA 59.756 36.000 0.00 0.00 34.60 2.10
2749 3216 5.528043 TGAATTTTTGCAGGCACTTAGAA 57.472 34.783 0.00 0.00 34.60 2.10
2750 3217 5.288804 TGAATTTTTGCAGGCACTTAGAAC 58.711 37.500 0.00 0.00 34.60 3.01
2751 3218 5.068987 TGAATTTTTGCAGGCACTTAGAACT 59.931 36.000 0.00 0.00 34.60 3.01
2752 3219 5.535753 ATTTTTGCAGGCACTTAGAACTT 57.464 34.783 0.00 0.00 34.60 2.66
2753 3220 5.337578 TTTTTGCAGGCACTTAGAACTTT 57.662 34.783 0.00 0.00 34.60 2.66
2754 3221 5.337578 TTTTGCAGGCACTTAGAACTTTT 57.662 34.783 0.00 0.00 34.60 2.27
2755 3222 3.988379 TGCAGGCACTTAGAACTTTTG 57.012 42.857 0.00 0.00 34.60 2.44
2756 3223 3.287222 TGCAGGCACTTAGAACTTTTGT 58.713 40.909 0.00 0.00 34.60 2.83
2757 3224 3.315191 TGCAGGCACTTAGAACTTTTGTC 59.685 43.478 0.00 0.00 34.60 3.18
2758 3225 3.315191 GCAGGCACTTAGAACTTTTGTCA 59.685 43.478 0.00 0.00 34.60 3.58
2759 3226 4.202010 GCAGGCACTTAGAACTTTTGTCAA 60.202 41.667 0.00 0.00 34.60 3.18
2760 3227 5.507985 GCAGGCACTTAGAACTTTTGTCAAT 60.508 40.000 0.00 0.00 34.60 2.57
2761 3228 5.916883 CAGGCACTTAGAACTTTTGTCAATG 59.083 40.000 0.00 0.00 34.60 2.82
2762 3229 5.594317 AGGCACTTAGAACTTTTGTCAATGT 59.406 36.000 0.00 0.00 27.25 2.71
2763 3230 6.096846 AGGCACTTAGAACTTTTGTCAATGTT 59.903 34.615 4.72 4.72 27.25 2.71
2764 3231 6.756542 GGCACTTAGAACTTTTGTCAATGTTT 59.243 34.615 6.10 0.00 31.96 2.83
2765 3232 7.043391 GGCACTTAGAACTTTTGTCAATGTTTC 60.043 37.037 6.10 1.04 31.96 2.78
2766 3233 7.702348 GCACTTAGAACTTTTGTCAATGTTTCT 59.298 33.333 6.10 6.96 31.96 2.52
2767 3234 9.226345 CACTTAGAACTTTTGTCAATGTTTCTC 57.774 33.333 6.42 0.00 31.96 2.87
2768 3235 9.178758 ACTTAGAACTTTTGTCAATGTTTCTCT 57.821 29.630 6.42 3.36 31.96 3.10
2769 3236 9.657121 CTTAGAACTTTTGTCAATGTTTCTCTC 57.343 33.333 6.42 0.00 31.96 3.20
2770 3237 7.630242 AGAACTTTTGTCAATGTTTCTCTCA 57.370 32.000 6.10 0.00 31.96 3.27
2771 3238 8.055279 AGAACTTTTGTCAATGTTTCTCTCAA 57.945 30.769 6.10 0.00 31.96 3.02
2772 3239 8.522830 AGAACTTTTGTCAATGTTTCTCTCAAA 58.477 29.630 6.10 0.00 31.96 2.69
2773 3240 9.305925 GAACTTTTGTCAATGTTTCTCTCAAAT 57.694 29.630 6.10 0.00 31.96 2.32
2774 3241 8.862550 ACTTTTGTCAATGTTTCTCTCAAATC 57.137 30.769 0.00 0.00 0.00 2.17
2775 3242 7.645340 ACTTTTGTCAATGTTTCTCTCAAATCG 59.355 33.333 0.00 0.00 0.00 3.34
2776 3243 6.859420 TTGTCAATGTTTCTCTCAAATCGA 57.141 33.333 0.00 0.00 0.00 3.59
2777 3244 7.439157 TTGTCAATGTTTCTCTCAAATCGAT 57.561 32.000 0.00 0.00 0.00 3.59
2778 3245 7.439157 TGTCAATGTTTCTCTCAAATCGATT 57.561 32.000 4.39 4.39 0.00 3.34
2779 3246 7.874940 TGTCAATGTTTCTCTCAAATCGATTT 58.125 30.769 17.60 17.60 0.00 2.17
2780 3247 8.352201 TGTCAATGTTTCTCTCAAATCGATTTT 58.648 29.630 20.56 3.98 0.00 1.82
2781 3248 9.185192 GTCAATGTTTCTCTCAAATCGATTTTT 57.815 29.630 20.56 6.03 0.00 1.94
2803 3270 6.667981 TTTTTCGATTTTACTGTTCATGCG 57.332 33.333 0.00 0.00 0.00 4.73
2804 3271 4.335082 TTCGATTTTACTGTTCATGCGG 57.665 40.909 0.00 0.00 0.00 5.69
2805 3272 2.675844 TCGATTTTACTGTTCATGCGGG 59.324 45.455 0.00 0.00 0.00 6.13
2806 3273 2.675844 CGATTTTACTGTTCATGCGGGA 59.324 45.455 0.00 0.00 0.00 5.14
2807 3274 3.242413 CGATTTTACTGTTCATGCGGGAG 60.242 47.826 0.00 0.00 0.00 4.30
2825 3292 1.637338 AGCATATGAGCTCGGGATCA 58.363 50.000 5.33 5.33 42.18 2.92
2826 3293 1.973515 AGCATATGAGCTCGGGATCAA 59.026 47.619 7.61 0.00 42.18 2.57
2827 3294 2.369860 AGCATATGAGCTCGGGATCAAA 59.630 45.455 7.61 0.00 42.18 2.69
2828 3295 3.141398 GCATATGAGCTCGGGATCAAAA 58.859 45.455 7.61 0.00 41.37 2.44
2829 3296 3.188048 GCATATGAGCTCGGGATCAAAAG 59.812 47.826 7.61 0.72 41.37 2.27
2830 3297 4.635223 CATATGAGCTCGGGATCAAAAGA 58.365 43.478 7.61 0.00 41.37 2.52
2831 3298 3.853355 ATGAGCTCGGGATCAAAAGAT 57.147 42.857 7.61 0.00 41.37 2.40
2832 3299 2.910199 TGAGCTCGGGATCAAAAGATG 58.090 47.619 0.00 0.00 34.74 2.90
2833 3300 2.501316 TGAGCTCGGGATCAAAAGATGA 59.499 45.455 0.00 0.00 43.67 2.92
2834 3301 2.869192 GAGCTCGGGATCAAAAGATGAC 59.131 50.000 0.00 0.00 41.93 3.06
2835 3302 2.503356 AGCTCGGGATCAAAAGATGACT 59.497 45.455 0.00 0.00 41.93 3.41
2836 3303 3.054802 AGCTCGGGATCAAAAGATGACTT 60.055 43.478 0.00 0.00 41.93 3.01
2837 3304 3.691609 GCTCGGGATCAAAAGATGACTTT 59.308 43.478 0.00 0.00 46.64 2.66
2838 3305 4.201861 GCTCGGGATCAAAAGATGACTTTC 60.202 45.833 0.00 0.00 44.32 2.62
2839 3306 3.932710 TCGGGATCAAAAGATGACTTTCG 59.067 43.478 0.00 0.00 44.32 3.46
2840 3307 3.932710 CGGGATCAAAAGATGACTTTCGA 59.067 43.478 0.00 0.00 44.32 3.71
2841 3308 4.033358 CGGGATCAAAAGATGACTTTCGAG 59.967 45.833 0.00 0.00 44.32 4.04
2842 3309 4.938226 GGGATCAAAAGATGACTTTCGAGT 59.062 41.667 0.00 0.00 44.32 4.18
2843 3310 6.106673 GGGATCAAAAGATGACTTTCGAGTA 58.893 40.000 0.00 0.00 44.32 2.59
2844 3311 6.594159 GGGATCAAAAGATGACTTTCGAGTAA 59.406 38.462 0.00 0.00 44.32 2.24
2845 3312 7.119262 GGGATCAAAAGATGACTTTCGAGTAAA 59.881 37.037 0.00 0.00 44.32 2.01
2846 3313 7.958025 GGATCAAAAGATGACTTTCGAGTAAAC 59.042 37.037 0.00 0.00 44.32 2.01
2847 3314 8.608844 ATCAAAAGATGACTTTCGAGTAAACT 57.391 30.769 0.00 0.00 44.32 2.66
2848 3315 9.706691 ATCAAAAGATGACTTTCGAGTAAACTA 57.293 29.630 0.00 0.00 44.32 2.24
2849 3316 9.193133 TCAAAAGATGACTTTCGAGTAAACTAG 57.807 33.333 0.00 0.00 44.32 2.57
2850 3317 8.436200 CAAAAGATGACTTTCGAGTAAACTAGG 58.564 37.037 0.00 0.00 44.32 3.02
2851 3318 6.210287 AGATGACTTTCGAGTAAACTAGGG 57.790 41.667 0.00 0.00 0.00 3.53
2852 3319 5.950549 AGATGACTTTCGAGTAAACTAGGGA 59.049 40.000 0.00 0.00 0.00 4.20
2853 3320 6.436532 AGATGACTTTCGAGTAAACTAGGGAA 59.563 38.462 0.00 0.00 0.00 3.97
2854 3321 6.600882 TGACTTTCGAGTAAACTAGGGAAT 57.399 37.500 0.00 0.00 0.00 3.01
2901 3368 0.394216 TTGGAATCCGAGCACCATGG 60.394 55.000 11.19 11.19 32.31 3.66
3027 3502 4.360951 TGAAATAGGTTGAAACGAGGGT 57.639 40.909 0.00 0.00 0.00 4.34
3033 3508 0.736053 GTTGAAACGAGGGTTGTGCA 59.264 50.000 0.00 0.00 36.25 4.57
3069 3544 4.020543 TGGGGCCTTTTAACACATGATAC 58.979 43.478 0.84 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.804748 GTTTCCCGTGACATGTCTTCC 59.195 52.381 25.55 12.85 0.00 3.46
13 14 2.882132 GGCATTTCCCGTTTCCCG 59.118 61.111 0.00 0.00 0.00 5.14
14 15 2.882132 CGGCATTTCCCGTTTCCC 59.118 61.111 0.00 0.00 43.24 3.97
69 73 8.950208 GTTGAGGAAACTAAACTATAGCTGAT 57.050 34.615 0.00 0.00 46.75 2.90
165 169 3.064682 CGAATAACATGCAAACCCGATGA 59.935 43.478 0.00 0.00 0.00 2.92
170 174 3.168193 CGAACGAATAACATGCAAACCC 58.832 45.455 0.00 0.00 0.00 4.11
171 175 3.168193 CCGAACGAATAACATGCAAACC 58.832 45.455 0.00 0.00 0.00 3.27
173 177 4.491234 AACCGAACGAATAACATGCAAA 57.509 36.364 0.00 0.00 0.00 3.68
187 191 7.474190 TCAATCCGGATTTAAATAAACCGAAC 58.526 34.615 27.21 0.72 39.71 3.95
190 194 8.751335 CATTTCAATCCGGATTTAAATAAACCG 58.249 33.333 33.33 22.92 34.30 4.44
205 209 2.611751 TGTCCGCATACATTTCAATCCG 59.388 45.455 0.00 0.00 0.00 4.18
211 215 4.335315 TCCAAAGATGTCCGCATACATTTC 59.665 41.667 2.71 0.00 40.17 2.17
222 227 3.879892 GAGCCAGTAATCCAAAGATGTCC 59.120 47.826 0.00 0.00 31.29 4.02
223 228 3.879892 GGAGCCAGTAATCCAAAGATGTC 59.120 47.826 0.00 0.00 35.54 3.06
228 233 1.065418 ACGGGAGCCAGTAATCCAAAG 60.065 52.381 0.00 0.00 37.33 2.77
229 234 0.988832 ACGGGAGCCAGTAATCCAAA 59.011 50.000 0.00 0.00 37.33 3.28
239 244 0.613572 TGACAGTGATACGGGAGCCA 60.614 55.000 0.00 0.00 0.00 4.75
245 250 1.647213 CGTTCGTTGACAGTGATACGG 59.353 52.381 0.00 0.00 34.93 4.02
246 251 1.057285 GCGTTCGTTGACAGTGATACG 59.943 52.381 0.00 3.63 35.46 3.06
253 258 1.282248 ACGGATGCGTTCGTTGACAG 61.282 55.000 6.39 0.00 36.04 3.51
258 263 2.438954 GCGTACGGATGCGTTCGTT 61.439 57.895 31.59 6.30 40.31 3.85
267 272 2.122797 TCCATGGACGCGTACGGAT 61.123 57.895 18.23 2.12 46.04 4.18
277 282 3.786635 GACACAGTATCTGTCCATGGAC 58.213 50.000 33.97 33.97 43.43 4.02
293 298 3.585862 GCAGACTCTTAAATCGGACACA 58.414 45.455 0.00 0.00 0.00 3.72
298 303 5.575606 TCTTTAACGCAGACTCTTAAATCGG 59.424 40.000 0.00 0.00 0.00 4.18
324 329 3.602390 TTTCAGACACGCACTTAAAGC 57.398 42.857 0.00 0.00 0.00 3.51
325 330 5.621228 GTGAATTTCAGACACGCACTTAAAG 59.379 40.000 0.00 0.00 0.00 1.85
326 331 5.504994 GGTGAATTTCAGACACGCACTTAAA 60.505 40.000 0.00 0.00 35.68 1.52
328 333 3.496884 GGTGAATTTCAGACACGCACTTA 59.503 43.478 0.00 0.00 35.68 2.24
329 334 2.290641 GGTGAATTTCAGACACGCACTT 59.709 45.455 0.00 0.00 35.68 3.16
330 335 1.873591 GGTGAATTTCAGACACGCACT 59.126 47.619 0.00 0.00 35.68 4.40
331 336 1.069227 GGGTGAATTTCAGACACGCAC 60.069 52.381 0.00 0.00 43.49 5.34
332 337 1.202758 AGGGTGAATTTCAGACACGCA 60.203 47.619 0.00 0.00 45.36 5.24
333 338 1.523758 AGGGTGAATTTCAGACACGC 58.476 50.000 0.00 0.00 44.04 5.34
334 339 5.880054 ATTTAGGGTGAATTTCAGACACG 57.120 39.130 0.00 0.00 35.68 4.49
358 363 5.560966 TTTCTTTGTGGGATAATTCGAGC 57.439 39.130 0.00 0.00 0.00 5.03
359 364 7.377766 TCTTTTCTTTGTGGGATAATTCGAG 57.622 36.000 0.00 0.00 0.00 4.04
369 374 5.222631 CCGAAGAATTCTTTTCTTTGTGGG 58.777 41.667 21.33 4.35 44.75 4.61
370 375 5.222631 CCCGAAGAATTCTTTTCTTTGTGG 58.777 41.667 21.33 12.35 44.75 4.17
426 433 1.612676 GTTTCCCTTTTGGTACGGCT 58.387 50.000 0.00 0.00 38.10 5.52
434 441 6.054860 TCTCTGAGATAGGTTTCCCTTTTG 57.945 41.667 2.58 0.00 42.66 2.44
435 442 6.216456 ACATCTCTGAGATAGGTTTCCCTTTT 59.784 38.462 19.16 0.00 42.66 2.27
439 446 4.261825 CGACATCTCTGAGATAGGTTTCCC 60.262 50.000 19.16 3.02 32.12 3.97
454 461 2.941453 TCTACTTGGCACGACATCTC 57.059 50.000 0.00 0.00 0.00 2.75
613 636 3.126343 CGTAGGGCTGTGATTAACCAAAC 59.874 47.826 0.00 0.00 0.00 2.93
654 677 4.340950 TGCGGAAAGATTCACCTTCTTTTT 59.659 37.500 0.70 0.00 42.08 1.94
655 678 3.888930 TGCGGAAAGATTCACCTTCTTTT 59.111 39.130 0.70 0.00 42.08 2.27
656 679 3.486383 TGCGGAAAGATTCACCTTCTTT 58.514 40.909 0.00 0.00 44.09 2.52
657 680 3.077359 CTGCGGAAAGATTCACCTTCTT 58.923 45.455 0.00 0.00 34.95 2.52
658 681 2.704572 CTGCGGAAAGATTCACCTTCT 58.295 47.619 0.00 0.00 0.00 2.85
659 682 1.131315 GCTGCGGAAAGATTCACCTTC 59.869 52.381 0.00 0.00 0.00 3.46
660 683 1.168714 GCTGCGGAAAGATTCACCTT 58.831 50.000 0.00 0.00 0.00 3.50
661 684 0.326264 AGCTGCGGAAAGATTCACCT 59.674 50.000 0.00 0.00 0.00 4.00
662 685 2.024176 TAGCTGCGGAAAGATTCACC 57.976 50.000 0.00 0.00 0.00 4.02
663 686 3.242870 CCATTAGCTGCGGAAAGATTCAC 60.243 47.826 0.00 0.00 0.00 3.18
664 687 2.945008 CCATTAGCTGCGGAAAGATTCA 59.055 45.455 0.00 0.00 0.00 2.57
666 689 1.678101 GCCATTAGCTGCGGAAAGATT 59.322 47.619 0.00 0.00 38.99 2.40
667 690 1.312815 GCCATTAGCTGCGGAAAGAT 58.687 50.000 0.00 0.00 38.99 2.40
668 691 0.035534 TGCCATTAGCTGCGGAAAGA 60.036 50.000 0.00 0.00 44.23 2.52
669 692 0.379669 CTGCCATTAGCTGCGGAAAG 59.620 55.000 0.00 0.00 44.23 2.62
708 734 5.713861 AGCTCCAAAAATGATGATATAGCCC 59.286 40.000 0.00 0.00 0.00 5.19
714 740 7.585579 TGCATTAGCTCCAAAAATGATGATA 57.414 32.000 9.80 0.00 42.74 2.15
793 843 4.131088 GGACTCGTCCGTCTGCCC 62.131 72.222 0.00 0.00 40.36 5.36
804 854 4.477975 GAGCCGGACGTGGACTCG 62.478 72.222 5.05 0.00 0.00 4.18
805 855 4.131088 GGAGCCGGACGTGGACTC 62.131 72.222 5.05 0.00 33.85 3.36
861 912 3.663176 TTGGCTCGTTGCTGCTGC 61.663 61.111 8.89 8.89 42.39 5.25
865 916 3.726517 CCCGTTGGCTCGTTGCTG 61.727 66.667 3.58 0.00 42.39 4.41
866 917 3.254024 ATCCCGTTGGCTCGTTGCT 62.254 57.895 3.58 0.00 42.39 3.91
890 957 3.726144 GCTGGCTGGCCTCCTTCT 61.726 66.667 13.05 0.00 36.94 2.85
891 958 2.850828 ATTGCTGGCTGGCCTCCTTC 62.851 60.000 13.05 2.38 36.94 3.46
892 959 2.927537 ATTGCTGGCTGGCCTCCTT 61.928 57.895 13.05 0.00 36.94 3.36
894 961 2.556840 TACATTGCTGGCTGGCCTCC 62.557 60.000 13.05 5.92 36.94 4.30
895 962 1.077501 TACATTGCTGGCTGGCCTC 60.078 57.895 13.05 5.49 36.94 4.70
896 963 1.077212 CTACATTGCTGGCTGGCCT 60.077 57.895 13.05 0.00 36.94 5.19
897 964 1.077501 TCTACATTGCTGGCTGGCC 60.078 57.895 4.43 4.43 0.00 5.36
898 965 1.099879 CCTCTACATTGCTGGCTGGC 61.100 60.000 0.00 0.00 0.00 4.85
899 966 1.099879 GCCTCTACATTGCTGGCTGG 61.100 60.000 0.00 0.00 40.36 4.85
900 967 2.401967 GCCTCTACATTGCTGGCTG 58.598 57.895 0.00 0.00 40.36 4.85
901 968 4.972875 GCCTCTACATTGCTGGCT 57.027 55.556 0.00 0.00 40.36 4.75
902 969 1.156645 CGAGCCTCTACATTGCTGGC 61.157 60.000 0.00 0.00 43.52 4.85
903 970 0.176680 ACGAGCCTCTACATTGCTGG 59.823 55.000 0.00 0.00 34.99 4.85
904 971 1.134995 TGACGAGCCTCTACATTGCTG 60.135 52.381 0.00 0.00 34.99 4.41
905 972 1.135915 CTGACGAGCCTCTACATTGCT 59.864 52.381 0.00 0.00 38.24 3.91
906 973 1.565305 CTGACGAGCCTCTACATTGC 58.435 55.000 0.00 0.00 0.00 3.56
907 974 1.134995 TGCTGACGAGCCTCTACATTG 60.135 52.381 0.00 0.00 45.57 2.82
908 975 1.186200 TGCTGACGAGCCTCTACATT 58.814 50.000 0.00 0.00 45.57 2.71
909 976 1.134965 GTTGCTGACGAGCCTCTACAT 60.135 52.381 0.00 0.00 45.57 2.29
910 977 0.243907 GTTGCTGACGAGCCTCTACA 59.756 55.000 0.00 0.00 45.57 2.74
911 978 3.037485 GTTGCTGACGAGCCTCTAC 57.963 57.895 0.00 0.00 45.57 2.59
921 988 2.551270 CGTTGGCTCGTTGCTGAC 59.449 61.111 3.58 2.68 42.39 3.51
922 989 2.664851 CCGTTGGCTCGTTGCTGA 60.665 61.111 3.58 0.00 42.39 4.26
923 990 3.726517 CCCGTTGGCTCGTTGCTG 61.727 66.667 3.58 0.00 42.39 4.41
924 991 3.254024 ATCCCGTTGGCTCGTTGCT 62.254 57.895 3.58 0.00 42.39 3.91
925 992 2.746277 ATCCCGTTGGCTCGTTGC 60.746 61.111 2.67 0.00 41.94 4.17
926 993 2.398554 CCATCCCGTTGGCTCGTTG 61.399 63.158 2.67 0.00 0.00 4.10
927 994 2.046314 CCATCCCGTTGGCTCGTT 60.046 61.111 2.67 0.00 0.00 3.85
928 995 2.521958 CTTCCATCCCGTTGGCTCGT 62.522 60.000 2.67 0.00 36.66 4.18
929 996 1.815421 CTTCCATCCCGTTGGCTCG 60.815 63.158 0.00 0.00 36.66 5.03
930 997 0.462759 CTCTTCCATCCCGTTGGCTC 60.463 60.000 0.00 0.00 36.66 4.70
931 998 1.604378 CTCTTCCATCCCGTTGGCT 59.396 57.895 0.00 0.00 36.66 4.75
932 999 1.452108 CCTCTTCCATCCCGTTGGC 60.452 63.158 0.00 0.00 36.66 4.52
933 1000 0.179000 CTCCTCTTCCATCCCGTTGG 59.821 60.000 0.00 0.00 38.18 3.77
934 1001 0.462759 GCTCCTCTTCCATCCCGTTG 60.463 60.000 0.00 0.00 0.00 4.10
935 1002 0.909610 TGCTCCTCTTCCATCCCGTT 60.910 55.000 0.00 0.00 0.00 4.44
936 1003 1.306141 TGCTCCTCTTCCATCCCGT 60.306 57.895 0.00 0.00 0.00 5.28
937 1004 1.045350 TCTGCTCCTCTTCCATCCCG 61.045 60.000 0.00 0.00 0.00 5.14
938 1005 0.758123 CTCTGCTCCTCTTCCATCCC 59.242 60.000 0.00 0.00 0.00 3.85
939 1006 0.758123 CCTCTGCTCCTCTTCCATCC 59.242 60.000 0.00 0.00 0.00 3.51
940 1007 1.786937 TCCTCTGCTCCTCTTCCATC 58.213 55.000 0.00 0.00 0.00 3.51
941 1008 2.117865 CTTCCTCTGCTCCTCTTCCAT 58.882 52.381 0.00 0.00 0.00 3.41
942 1009 1.077828 TCTTCCTCTGCTCCTCTTCCA 59.922 52.381 0.00 0.00 0.00 3.53
943 1010 1.859302 TCTTCCTCTGCTCCTCTTCC 58.141 55.000 0.00 0.00 0.00 3.46
944 1011 2.418609 GCTTCTTCCTCTGCTCCTCTTC 60.419 54.545 0.00 0.00 0.00 2.87
945 1012 1.554617 GCTTCTTCCTCTGCTCCTCTT 59.445 52.381 0.00 0.00 0.00 2.85
946 1013 1.194218 GCTTCTTCCTCTGCTCCTCT 58.806 55.000 0.00 0.00 0.00 3.69
1409 1519 1.690633 GCCTCCATCCTGTCTCCCA 60.691 63.158 0.00 0.00 0.00 4.37
1639 1776 0.323178 CCTGGTTGCATCTGGAAGCT 60.323 55.000 13.48 0.00 42.96 3.74
1742 2117 1.520342 GTCAGATCAGGCCAGTCGC 60.520 63.158 5.01 0.00 0.00 5.19
2096 2525 2.561419 CTCTTCGACCTAACACCTTCCA 59.439 50.000 0.00 0.00 0.00 3.53
2211 2664 6.937465 GGCATAAAACTGGAATTACCCAAAAA 59.063 34.615 0.00 0.00 35.47 1.94
2212 2665 6.468543 GGCATAAAACTGGAATTACCCAAAA 58.531 36.000 0.00 0.00 35.47 2.44
2253 2706 9.431887 GACAAACTGTGTAATCCTGTAGAATAA 57.568 33.333 0.00 0.00 41.96 1.40
2255 2708 7.450074 TGACAAACTGTGTAATCCTGTAGAAT 58.550 34.615 0.00 0.00 41.96 2.40
2258 2711 6.092670 CCATGACAAACTGTGTAATCCTGTAG 59.907 42.308 0.00 0.00 41.96 2.74
2260 2713 4.761739 CCATGACAAACTGTGTAATCCTGT 59.238 41.667 0.00 0.00 41.96 4.00
2261 2714 4.156556 CCCATGACAAACTGTGTAATCCTG 59.843 45.833 0.00 0.00 41.96 3.86
2262 2715 4.335416 CCCATGACAAACTGTGTAATCCT 58.665 43.478 0.00 0.00 41.96 3.24
2263 2716 3.443681 CCCCATGACAAACTGTGTAATCC 59.556 47.826 0.00 0.00 41.96 3.01
2264 2717 4.331968 TCCCCATGACAAACTGTGTAATC 58.668 43.478 0.00 0.00 41.96 1.75
2266 2719 3.866703 TCCCCATGACAAACTGTGTAA 57.133 42.857 0.00 0.00 41.96 2.41
2267 2720 4.380843 AATCCCCATGACAAACTGTGTA 57.619 40.909 0.00 0.00 41.96 2.90
2302 2769 2.741145 TGGTAAAACCTGGCACAACTT 58.259 42.857 0.00 0.00 39.58 2.66
2313 2780 8.187354 TCAAAACGAAAAAGAATGGTAAAACC 57.813 30.769 0.00 0.00 39.22 3.27
2343 2810 2.563179 ACTAGGAGCAACACGACAGAAT 59.437 45.455 0.00 0.00 0.00 2.40
2351 2818 1.429463 CCGACAACTAGGAGCAACAC 58.571 55.000 0.00 0.00 0.00 3.32
2393 2860 1.526917 GCATGGATAGCTTGCGGGT 60.527 57.895 0.00 0.00 0.00 5.28
2394 2861 2.263741 GGCATGGATAGCTTGCGGG 61.264 63.158 0.00 0.00 37.25 6.13
2449 2916 2.954318 AGATTAGCCGCGTCCTAGTTTA 59.046 45.455 4.92 0.00 0.00 2.01
2457 2924 1.951631 GGAGCAGATTAGCCGCGTC 60.952 63.158 4.92 0.00 34.23 5.19
2458 2925 2.107141 GGAGCAGATTAGCCGCGT 59.893 61.111 4.92 0.00 34.23 6.01
2459 2926 2.663188 GGGAGCAGATTAGCCGCG 60.663 66.667 0.00 0.00 34.23 6.46
2460 2927 2.663188 CGGGAGCAGATTAGCCGC 60.663 66.667 0.00 0.00 34.23 6.53
2461 2928 1.006805 CTCGGGAGCAGATTAGCCG 60.007 63.158 0.00 0.00 34.23 5.52
2479 2946 2.024176 TCACCCGAGCTCATTTAAGC 57.976 50.000 15.40 0.00 42.82 3.09
2480 2947 2.678336 GGTTCACCCGAGCTCATTTAAG 59.322 50.000 15.40 0.00 0.00 1.85
2481 2948 2.706890 GGTTCACCCGAGCTCATTTAA 58.293 47.619 15.40 0.00 0.00 1.52
2482 2949 2.396590 GGTTCACCCGAGCTCATTTA 57.603 50.000 15.40 0.00 0.00 1.40
2483 2950 3.249687 GGTTCACCCGAGCTCATTT 57.750 52.632 15.40 0.00 0.00 2.32
2493 2960 5.190992 AGTTTTGATTTTACGGTTCACCC 57.809 39.130 0.00 0.00 0.00 4.61
2494 2961 8.806177 ATTTAGTTTTGATTTTACGGTTCACC 57.194 30.769 0.00 0.00 0.00 4.02
2495 2962 9.453325 TGATTTAGTTTTGATTTTACGGTTCAC 57.547 29.630 0.00 0.00 0.00 3.18
2553 3020 9.178758 ACTTAGAACTTTTGTCAATGTTTCTCT 57.821 29.630 6.42 3.36 31.96 3.10
2554 3021 9.226345 CACTTAGAACTTTTGTCAATGTTTCTC 57.774 33.333 6.42 0.00 31.96 2.87
2555 3022 7.702348 GCACTTAGAACTTTTGTCAATGTTTCT 59.298 33.333 6.10 6.96 31.96 2.52
2556 3023 7.043391 GGCACTTAGAACTTTTGTCAATGTTTC 60.043 37.037 6.10 1.04 31.96 2.78
2557 3024 6.756542 GGCACTTAGAACTTTTGTCAATGTTT 59.243 34.615 6.10 0.00 31.96 2.83
2558 3025 6.096846 AGGCACTTAGAACTTTTGTCAATGTT 59.903 34.615 4.72 4.72 27.25 2.71
2559 3026 5.594317 AGGCACTTAGAACTTTTGTCAATGT 59.406 36.000 0.00 0.00 27.25 2.71
2560 3027 5.916883 CAGGCACTTAGAACTTTTGTCAATG 59.083 40.000 0.00 0.00 34.60 2.82
2561 3028 5.507985 GCAGGCACTTAGAACTTTTGTCAAT 60.508 40.000 0.00 0.00 34.60 2.57
2562 3029 4.202010 GCAGGCACTTAGAACTTTTGTCAA 60.202 41.667 0.00 0.00 34.60 3.18
2563 3030 3.315191 GCAGGCACTTAGAACTTTTGTCA 59.685 43.478 0.00 0.00 34.60 3.58
2564 3031 3.315191 TGCAGGCACTTAGAACTTTTGTC 59.685 43.478 0.00 0.00 34.60 3.18
2565 3032 3.287222 TGCAGGCACTTAGAACTTTTGT 58.713 40.909 0.00 0.00 34.60 2.83
2566 3033 3.988379 TGCAGGCACTTAGAACTTTTG 57.012 42.857 0.00 0.00 34.60 2.44
2567 3034 5.337578 TTTTGCAGGCACTTAGAACTTTT 57.662 34.783 0.00 0.00 34.60 2.27
2568 3035 5.337578 TTTTTGCAGGCACTTAGAACTTT 57.662 34.783 0.00 0.00 34.60 2.66
2569 3036 5.535753 ATTTTTGCAGGCACTTAGAACTT 57.464 34.783 0.00 0.00 34.60 2.66
2570 3037 5.532557 GAATTTTTGCAGGCACTTAGAACT 58.467 37.500 0.00 0.00 34.60 3.01
2571 3038 4.382754 CGAATTTTTGCAGGCACTTAGAAC 59.617 41.667 0.00 0.00 34.60 3.01
2572 3039 4.037446 ACGAATTTTTGCAGGCACTTAGAA 59.963 37.500 0.00 0.00 34.60 2.10
2573 3040 3.568007 ACGAATTTTTGCAGGCACTTAGA 59.432 39.130 0.00 0.00 34.60 2.10
2574 3041 3.900941 ACGAATTTTTGCAGGCACTTAG 58.099 40.909 0.00 0.00 34.60 2.18
2575 3042 3.316588 TGACGAATTTTTGCAGGCACTTA 59.683 39.130 0.00 0.00 34.60 2.24
2576 3043 2.100584 TGACGAATTTTTGCAGGCACTT 59.899 40.909 0.00 0.00 34.60 3.16
2577 3044 1.680735 TGACGAATTTTTGCAGGCACT 59.319 42.857 0.00 0.00 43.88 4.40
2578 3045 2.132740 TGACGAATTTTTGCAGGCAC 57.867 45.000 0.00 0.00 0.00 5.01
2579 3046 2.295629 TCATGACGAATTTTTGCAGGCA 59.704 40.909 0.00 0.00 0.00 4.75
2580 3047 2.945278 TCATGACGAATTTTTGCAGGC 58.055 42.857 0.00 0.00 0.00 4.85
2581 3048 5.634439 TGATTTCATGACGAATTTTTGCAGG 59.366 36.000 0.00 0.00 32.32 4.85
2582 3049 6.144241 TGTGATTTCATGACGAATTTTTGCAG 59.856 34.615 0.00 0.00 32.32 4.41
2583 3050 5.981915 TGTGATTTCATGACGAATTTTTGCA 59.018 32.000 0.00 0.00 32.32 4.08
2584 3051 6.450845 TGTGATTTCATGACGAATTTTTGC 57.549 33.333 0.00 0.00 32.32 3.68
2585 3052 8.164153 GGAATGTGATTTCATGACGAATTTTTG 58.836 33.333 0.00 0.00 32.32 2.44
2586 3053 8.090214 AGGAATGTGATTTCATGACGAATTTTT 58.910 29.630 0.00 0.00 32.32 1.94
2587 3054 7.605449 AGGAATGTGATTTCATGACGAATTTT 58.395 30.769 0.00 0.00 32.32 1.82
2588 3055 7.161773 AGGAATGTGATTTCATGACGAATTT 57.838 32.000 0.00 0.00 32.32 1.82
2589 3056 6.764308 AGGAATGTGATTTCATGACGAATT 57.236 33.333 0.00 0.00 32.32 2.17
2590 3057 7.275183 TCTAGGAATGTGATTTCATGACGAAT 58.725 34.615 0.00 0.00 32.32 3.34
2591 3058 6.639563 TCTAGGAATGTGATTTCATGACGAA 58.360 36.000 0.00 0.00 0.00 3.85
2592 3059 6.220726 TCTAGGAATGTGATTTCATGACGA 57.779 37.500 0.00 0.00 0.00 4.20
2593 3060 6.018425 CCTTCTAGGAATGTGATTTCATGACG 60.018 42.308 0.00 0.00 37.67 4.35
2594 3061 6.238593 GCCTTCTAGGAATGTGATTTCATGAC 60.239 42.308 0.00 0.00 37.67 3.06
2595 3062 5.824624 GCCTTCTAGGAATGTGATTTCATGA 59.175 40.000 0.00 0.00 37.67 3.07
2596 3063 5.277683 CGCCTTCTAGGAATGTGATTTCATG 60.278 44.000 0.00 0.00 37.67 3.07
2597 3064 4.818546 CGCCTTCTAGGAATGTGATTTCAT 59.181 41.667 0.00 0.00 37.67 2.57
2598 3065 4.191544 CGCCTTCTAGGAATGTGATTTCA 58.808 43.478 0.00 0.00 37.67 2.69
2599 3066 4.034510 CACGCCTTCTAGGAATGTGATTTC 59.965 45.833 0.00 0.00 37.67 2.17
2600 3067 3.941483 CACGCCTTCTAGGAATGTGATTT 59.059 43.478 0.00 0.00 37.67 2.17
2601 3068 3.535561 CACGCCTTCTAGGAATGTGATT 58.464 45.455 0.00 0.00 37.67 2.57
2602 3069 2.158900 CCACGCCTTCTAGGAATGTGAT 60.159 50.000 12.05 0.00 37.67 3.06
2603 3070 1.207089 CCACGCCTTCTAGGAATGTGA 59.793 52.381 12.05 0.00 37.67 3.58
2604 3071 1.656652 CCACGCCTTCTAGGAATGTG 58.343 55.000 0.00 2.20 37.67 3.21
2605 3072 0.107654 GCCACGCCTTCTAGGAATGT 60.108 55.000 0.00 0.00 37.67 2.71
2606 3073 0.107703 TGCCACGCCTTCTAGGAATG 60.108 55.000 0.00 0.00 37.67 2.67
2607 3074 0.618458 TTGCCACGCCTTCTAGGAAT 59.382 50.000 0.00 0.00 37.67 3.01
2608 3075 0.398696 TTTGCCACGCCTTCTAGGAA 59.601 50.000 0.00 0.00 37.67 3.36
2609 3076 0.398696 TTTTGCCACGCCTTCTAGGA 59.601 50.000 0.00 0.00 37.67 2.94
2610 3077 1.243902 TTTTTGCCACGCCTTCTAGG 58.756 50.000 0.00 0.00 38.80 3.02
2629 3096 8.708742 GCTTTTTCAGAGTACTGTTTTTGTTTT 58.291 29.630 0.00 0.00 43.81 2.43
2630 3097 8.088365 AGCTTTTTCAGAGTACTGTTTTTGTTT 58.912 29.630 0.00 0.00 43.81 2.83
2631 3098 7.602753 AGCTTTTTCAGAGTACTGTTTTTGTT 58.397 30.769 0.00 0.00 43.81 2.83
2632 3099 7.158099 AGCTTTTTCAGAGTACTGTTTTTGT 57.842 32.000 0.00 0.00 43.81 2.83
2633 3100 8.398665 AGTAGCTTTTTCAGAGTACTGTTTTTG 58.601 33.333 0.00 0.00 43.81 2.44
2634 3101 8.507524 AGTAGCTTTTTCAGAGTACTGTTTTT 57.492 30.769 0.00 0.00 43.81 1.94
2635 3102 8.507524 AAGTAGCTTTTTCAGAGTACTGTTTT 57.492 30.769 0.00 0.00 43.81 2.43
2636 3103 8.507524 AAAGTAGCTTTTTCAGAGTACTGTTT 57.492 30.769 0.00 0.00 36.62 2.83
2637 3104 7.769044 TGAAAGTAGCTTTTTCAGAGTACTGTT 59.231 33.333 17.30 0.00 39.05 3.16
2638 3105 7.272978 TGAAAGTAGCTTTTTCAGAGTACTGT 58.727 34.615 17.30 0.00 39.05 3.55
2639 3106 7.715265 TGAAAGTAGCTTTTTCAGAGTACTG 57.285 36.000 17.30 0.00 39.05 2.74
2640 3107 8.613482 GTTTGAAAGTAGCTTTTTCAGAGTACT 58.387 33.333 19.21 0.00 43.22 2.73
2641 3108 7.583040 CGTTTGAAAGTAGCTTTTTCAGAGTAC 59.417 37.037 19.21 15.67 43.22 2.73
2642 3109 7.627340 CGTTTGAAAGTAGCTTTTTCAGAGTA 58.373 34.615 19.21 8.08 43.22 2.59
2643 3110 6.487103 CGTTTGAAAGTAGCTTTTTCAGAGT 58.513 36.000 19.21 0.00 43.22 3.24
2644 3111 5.396654 GCGTTTGAAAGTAGCTTTTTCAGAG 59.603 40.000 19.21 16.17 43.22 3.35
2645 3112 5.163703 TGCGTTTGAAAGTAGCTTTTTCAGA 60.164 36.000 19.21 15.01 43.22 3.27
2646 3113 5.034152 TGCGTTTGAAAGTAGCTTTTTCAG 58.966 37.500 19.21 12.77 43.22 3.02
2647 3114 4.987832 TGCGTTTGAAAGTAGCTTTTTCA 58.012 34.783 17.30 17.30 41.40 2.69
2648 3115 6.510746 AATGCGTTTGAAAGTAGCTTTTTC 57.489 33.333 13.56 13.56 33.49 2.29
2649 3116 6.902224 AAATGCGTTTGAAAGTAGCTTTTT 57.098 29.167 2.32 0.00 33.49 1.94
2650 3117 6.902224 AAAATGCGTTTGAAAGTAGCTTTT 57.098 29.167 4.29 0.00 36.97 2.27
2662 3129 3.114809 TCAGTGCTTCAAAATGCGTTTG 58.885 40.909 4.29 5.51 46.86 2.93
2663 3130 3.435105 TCAGTGCTTCAAAATGCGTTT 57.565 38.095 0.00 0.00 0.00 3.60
2664 3131 3.435105 TTCAGTGCTTCAAAATGCGTT 57.565 38.095 0.00 0.00 0.00 4.84
2665 3132 3.648339 ATTCAGTGCTTCAAAATGCGT 57.352 38.095 0.00 0.00 0.00 5.24
2666 3133 4.209703 ACAAATTCAGTGCTTCAAAATGCG 59.790 37.500 0.00 0.00 0.00 4.73
2667 3134 5.662211 ACAAATTCAGTGCTTCAAAATGC 57.338 34.783 0.00 0.00 0.00 3.56
2668 3135 8.898983 AAAAACAAATTCAGTGCTTCAAAATG 57.101 26.923 0.00 0.00 0.00 2.32
2704 3171 8.217131 TCATCATGAAATCACATTCCTGTAAG 57.783 34.615 0.00 0.00 33.14 2.34
2705 3172 8.578448 TTCATCATGAAATCACATTCCTGTAA 57.422 30.769 0.00 0.00 32.71 2.41
2706 3173 8.756486 ATTCATCATGAAATCACATTCCTGTA 57.244 30.769 3.63 0.00 40.12 2.74
2707 3174 7.655521 ATTCATCATGAAATCACATTCCTGT 57.344 32.000 3.63 0.00 40.12 4.00
2708 3175 8.942338 AAATTCATCATGAAATCACATTCCTG 57.058 30.769 3.63 0.00 40.12 3.86
2709 3176 9.953565 AAAAATTCATCATGAAATCACATTCCT 57.046 25.926 3.63 0.00 40.12 3.36
2710 3177 9.982291 CAAAAATTCATCATGAAATCACATTCC 57.018 29.630 3.63 0.00 40.12 3.01
2711 3178 9.485591 GCAAAAATTCATCATGAAATCACATTC 57.514 29.630 3.63 0.00 40.12 2.67
2712 3179 9.004717 TGCAAAAATTCATCATGAAATCACATT 57.995 25.926 3.63 0.00 40.12 2.71
2713 3180 8.554835 TGCAAAAATTCATCATGAAATCACAT 57.445 26.923 3.63 0.00 40.12 3.21
2714 3181 7.118535 CCTGCAAAAATTCATCATGAAATCACA 59.881 33.333 3.63 0.00 40.12 3.58
2715 3182 7.461107 CCTGCAAAAATTCATCATGAAATCAC 58.539 34.615 3.63 0.00 40.12 3.06
2716 3183 6.092944 GCCTGCAAAAATTCATCATGAAATCA 59.907 34.615 3.63 0.00 40.12 2.57
2717 3184 6.092944 TGCCTGCAAAAATTCATCATGAAATC 59.907 34.615 3.63 0.00 40.12 2.17
2718 3185 5.941058 TGCCTGCAAAAATTCATCATGAAAT 59.059 32.000 3.63 0.00 40.12 2.17
2719 3186 5.179742 GTGCCTGCAAAAATTCATCATGAAA 59.820 36.000 3.63 0.00 40.12 2.69
2720 3187 4.691685 GTGCCTGCAAAAATTCATCATGAA 59.308 37.500 1.59 1.59 41.09 2.57
2721 3188 4.020928 AGTGCCTGCAAAAATTCATCATGA 60.021 37.500 0.00 0.00 0.00 3.07
2722 3189 4.250464 AGTGCCTGCAAAAATTCATCATG 58.750 39.130 0.00 0.00 0.00 3.07
2723 3190 4.546829 AGTGCCTGCAAAAATTCATCAT 57.453 36.364 0.00 0.00 0.00 2.45
2724 3191 4.339872 AAGTGCCTGCAAAAATTCATCA 57.660 36.364 0.00 0.00 0.00 3.07
2725 3192 5.713025 TCTAAGTGCCTGCAAAAATTCATC 58.287 37.500 0.00 0.00 0.00 2.92
2726 3193 5.726980 TCTAAGTGCCTGCAAAAATTCAT 57.273 34.783 0.00 0.00 0.00 2.57
2727 3194 5.068987 AGTTCTAAGTGCCTGCAAAAATTCA 59.931 36.000 0.00 0.00 0.00 2.57
2728 3195 5.532557 AGTTCTAAGTGCCTGCAAAAATTC 58.467 37.500 0.00 0.00 0.00 2.17
2729 3196 5.535753 AGTTCTAAGTGCCTGCAAAAATT 57.464 34.783 0.00 0.00 0.00 1.82
2730 3197 5.535753 AAGTTCTAAGTGCCTGCAAAAAT 57.464 34.783 0.00 0.00 0.00 1.82
2731 3198 5.337578 AAAGTTCTAAGTGCCTGCAAAAA 57.662 34.783 0.00 0.00 0.00 1.94
2732 3199 5.108517 CAAAAGTTCTAAGTGCCTGCAAAA 58.891 37.500 0.00 0.00 0.00 2.44
2733 3200 4.159506 ACAAAAGTTCTAAGTGCCTGCAAA 59.840 37.500 0.00 0.00 0.00 3.68
2734 3201 3.699038 ACAAAAGTTCTAAGTGCCTGCAA 59.301 39.130 0.00 0.00 0.00 4.08
2735 3202 3.287222 ACAAAAGTTCTAAGTGCCTGCA 58.713 40.909 0.00 0.00 0.00 4.41
2736 3203 3.315191 TGACAAAAGTTCTAAGTGCCTGC 59.685 43.478 0.00 0.00 0.00 4.85
2737 3204 5.499139 TTGACAAAAGTTCTAAGTGCCTG 57.501 39.130 0.00 0.00 0.00 4.85
2738 3205 5.594317 ACATTGACAAAAGTTCTAAGTGCCT 59.406 36.000 0.00 0.00 0.00 4.75
2739 3206 5.831997 ACATTGACAAAAGTTCTAAGTGCC 58.168 37.500 0.00 0.00 0.00 5.01
2740 3207 7.702348 AGAAACATTGACAAAAGTTCTAAGTGC 59.298 33.333 9.09 0.00 0.00 4.40
2741 3208 9.226345 GAGAAACATTGACAAAAGTTCTAAGTG 57.774 33.333 9.09 0.00 0.00 3.16
2742 3209 9.178758 AGAGAAACATTGACAAAAGTTCTAAGT 57.821 29.630 9.09 0.00 0.00 2.24
2743 3210 9.657121 GAGAGAAACATTGACAAAAGTTCTAAG 57.343 33.333 9.09 0.00 0.00 2.18
2744 3211 9.173021 TGAGAGAAACATTGACAAAAGTTCTAA 57.827 29.630 9.09 0.00 0.00 2.10
2745 3212 8.731275 TGAGAGAAACATTGACAAAAGTTCTA 57.269 30.769 9.09 0.00 0.00 2.10
2746 3213 7.630242 TGAGAGAAACATTGACAAAAGTTCT 57.370 32.000 9.09 9.17 0.00 3.01
2747 3214 8.687824 TTTGAGAGAAACATTGACAAAAGTTC 57.312 30.769 9.09 5.33 0.00 3.01
2748 3215 9.305925 GATTTGAGAGAAACATTGACAAAAGTT 57.694 29.630 0.00 0.00 31.45 2.66
2749 3216 7.645340 CGATTTGAGAGAAACATTGACAAAAGT 59.355 33.333 0.00 0.00 31.45 2.66
2750 3217 7.857389 TCGATTTGAGAGAAACATTGACAAAAG 59.143 33.333 0.00 0.00 31.45 2.27
2751 3218 7.702386 TCGATTTGAGAGAAACATTGACAAAA 58.298 30.769 0.00 0.00 31.45 2.44
2752 3219 7.258022 TCGATTTGAGAGAAACATTGACAAA 57.742 32.000 0.00 0.00 0.00 2.83
2753 3220 6.859420 TCGATTTGAGAGAAACATTGACAA 57.141 33.333 0.00 0.00 0.00 3.18
2754 3221 7.439157 AATCGATTTGAGAGAAACATTGACA 57.561 32.000 4.39 0.00 0.00 3.58
2755 3222 8.733857 AAAATCGATTTGAGAGAAACATTGAC 57.266 30.769 23.38 0.00 0.00 3.18
2780 3247 5.627367 CCGCATGAACAGTAAAATCGAAAAA 59.373 36.000 0.00 0.00 0.00 1.94
2781 3248 5.150683 CCGCATGAACAGTAAAATCGAAAA 58.849 37.500 0.00 0.00 0.00 2.29
2782 3249 4.378978 CCCGCATGAACAGTAAAATCGAAA 60.379 41.667 0.00 0.00 0.00 3.46
2783 3250 3.126171 CCCGCATGAACAGTAAAATCGAA 59.874 43.478 0.00 0.00 0.00 3.71
2784 3251 2.675844 CCCGCATGAACAGTAAAATCGA 59.324 45.455 0.00 0.00 0.00 3.59
2785 3252 2.675844 TCCCGCATGAACAGTAAAATCG 59.324 45.455 0.00 0.00 0.00 3.34
2786 3253 3.487544 GCTCCCGCATGAACAGTAAAATC 60.488 47.826 0.00 0.00 35.78 2.17
2787 3254 2.423538 GCTCCCGCATGAACAGTAAAAT 59.576 45.455 0.00 0.00 35.78 1.82
2788 3255 1.810151 GCTCCCGCATGAACAGTAAAA 59.190 47.619 0.00 0.00 35.78 1.52
2789 3256 1.271108 TGCTCCCGCATGAACAGTAAA 60.271 47.619 0.00 0.00 42.25 2.01
2790 3257 0.323302 TGCTCCCGCATGAACAGTAA 59.677 50.000 0.00 0.00 42.25 2.24
2791 3258 1.979262 TGCTCCCGCATGAACAGTA 59.021 52.632 0.00 0.00 42.25 2.74
2792 3259 2.749682 TGCTCCCGCATGAACAGT 59.250 55.556 0.00 0.00 42.25 3.55
2806 3273 8.431815 ATCTTTTGATCCCGAGCTCATATGCT 62.432 42.308 15.40 0.00 39.52 3.79
2807 3274 2.462456 TTGATCCCGAGCTCATATGC 57.538 50.000 15.40 0.11 0.00 3.14
2808 3275 4.635223 TCTTTTGATCCCGAGCTCATATG 58.365 43.478 15.40 0.00 0.00 1.78
2809 3276 4.963318 TCTTTTGATCCCGAGCTCATAT 57.037 40.909 15.40 3.21 0.00 1.78
2810 3277 4.344968 TCATCTTTTGATCCCGAGCTCATA 59.655 41.667 15.40 0.00 36.97 2.15
2811 3278 3.135348 TCATCTTTTGATCCCGAGCTCAT 59.865 43.478 15.40 0.00 36.97 2.90
2812 3279 2.501316 TCATCTTTTGATCCCGAGCTCA 59.499 45.455 15.40 0.00 36.97 4.26
2813 3280 2.869192 GTCATCTTTTGATCCCGAGCTC 59.131 50.000 2.73 2.73 36.97 4.09
2814 3281 2.503356 AGTCATCTTTTGATCCCGAGCT 59.497 45.455 0.00 0.00 36.97 4.09
2815 3282 2.911484 AGTCATCTTTTGATCCCGAGC 58.089 47.619 0.00 0.00 36.97 5.03
2816 3283 4.033358 CGAAAGTCATCTTTTGATCCCGAG 59.967 45.833 2.79 0.00 43.87 4.63
2817 3284 3.932710 CGAAAGTCATCTTTTGATCCCGA 59.067 43.478 2.79 0.00 43.87 5.14
2818 3285 3.932710 TCGAAAGTCATCTTTTGATCCCG 59.067 43.478 6.56 0.00 44.43 5.14
2819 3286 4.938226 ACTCGAAAGTCATCTTTTGATCCC 59.062 41.667 9.98 0.00 46.57 3.85
2820 3287 7.596749 TTACTCGAAAGTCATCTTTTGATCC 57.403 36.000 9.98 0.00 46.57 3.36
2821 3288 8.713271 AGTTTACTCGAAAGTCATCTTTTGATC 58.287 33.333 9.98 0.00 46.57 2.92
2822 3289 8.608844 AGTTTACTCGAAAGTCATCTTTTGAT 57.391 30.769 9.98 5.31 46.57 2.57
2823 3290 9.193133 CTAGTTTACTCGAAAGTCATCTTTTGA 57.807 33.333 9.39 9.39 46.02 2.69
2824 3291 8.436200 CCTAGTTTACTCGAAAGTCATCTTTTG 58.564 37.037 0.00 0.00 42.99 2.44
2825 3292 7.603024 CCCTAGTTTACTCGAAAGTCATCTTTT 59.397 37.037 0.00 0.00 42.99 2.27
2826 3293 7.039223 TCCCTAGTTTACTCGAAAGTCATCTTT 60.039 37.037 0.00 0.00 45.24 2.52
2827 3294 6.436532 TCCCTAGTTTACTCGAAAGTCATCTT 59.563 38.462 0.00 0.00 36.92 2.40
2828 3295 5.950549 TCCCTAGTTTACTCGAAAGTCATCT 59.049 40.000 0.00 0.00 36.92 2.90
2829 3296 6.205101 TCCCTAGTTTACTCGAAAGTCATC 57.795 41.667 0.00 0.00 36.92 2.92
2830 3297 6.600882 TTCCCTAGTTTACTCGAAAGTCAT 57.399 37.500 0.00 0.00 36.92 3.06
2831 3298 6.600882 ATTCCCTAGTTTACTCGAAAGTCA 57.399 37.500 0.00 0.00 36.92 3.41
2832 3299 9.247126 GATAATTCCCTAGTTTACTCGAAAGTC 57.753 37.037 0.00 0.00 36.92 3.01
2833 3300 8.755977 TGATAATTCCCTAGTTTACTCGAAAGT 58.244 33.333 0.00 0.00 39.66 2.66
2834 3301 9.032420 GTGATAATTCCCTAGTTTACTCGAAAG 57.968 37.037 0.00 0.00 0.00 2.62
2835 3302 8.533657 TGTGATAATTCCCTAGTTTACTCGAAA 58.466 33.333 0.00 0.00 0.00 3.46
2836 3303 8.070034 TGTGATAATTCCCTAGTTTACTCGAA 57.930 34.615 0.00 0.00 0.00 3.71
2837 3304 7.649533 TGTGATAATTCCCTAGTTTACTCGA 57.350 36.000 0.00 0.00 0.00 4.04
2838 3305 8.888579 ATTGTGATAATTCCCTAGTTTACTCG 57.111 34.615 0.00 0.00 0.00 4.18
2887 3354 3.112205 GCCTCCATGGTGCTCGGAT 62.112 63.158 12.58 0.00 38.35 4.18
2888 3355 3.785859 GCCTCCATGGTGCTCGGA 61.786 66.667 12.58 0.00 38.35 4.55
2901 3368 9.836864 ATTTTGAATTTTATATTTGGAGGCCTC 57.163 29.630 25.59 25.59 0.00 4.70
2970 3437 5.439721 TGTGCACTATGCCTTCATCTATTT 58.560 37.500 19.41 0.00 44.23 1.40
2971 3438 5.039920 TGTGCACTATGCCTTCATCTATT 57.960 39.130 19.41 0.00 44.23 1.73
3004 3479 5.321927 ACCCTCGTTTCAACCTATTTCATT 58.678 37.500 0.00 0.00 0.00 2.57
3006 3481 4.360951 ACCCTCGTTTCAACCTATTTCA 57.639 40.909 0.00 0.00 0.00 2.69
3007 3482 4.517832 ACAACCCTCGTTTCAACCTATTTC 59.482 41.667 0.00 0.00 0.00 2.17
3013 3488 0.030235 GCACAACCCTCGTTTCAACC 59.970 55.000 0.00 0.00 0.00 3.77
3015 3490 1.464734 TTGCACAACCCTCGTTTCAA 58.535 45.000 0.00 0.00 0.00 2.69
3042 3517 3.582164 TGTGTTAAAAGGCCCCAGATTT 58.418 40.909 0.00 0.00 0.00 2.17
3048 3523 4.278310 AGTATCATGTGTTAAAAGGCCCC 58.722 43.478 0.00 0.00 0.00 5.80
3049 3524 7.284489 TGAATAGTATCATGTGTTAAAAGGCCC 59.716 37.037 0.00 0.00 0.00 5.80


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.