Multiple sequence alignment - TraesCS7D01G337200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G337200 chr7D 100.000 2066 0 0 517 2582 430097585 430095520 0.000000e+00 3816.0
1 TraesCS7D01G337200 chr7D 84.991 1106 88 45 947 1993 429711400 429710314 0.000000e+00 1051.0
2 TraesCS7D01G337200 chr7D 93.385 257 12 5 517 770 31475688 31475434 2.430000e-100 375.0
3 TraesCS7D01G337200 chr7D 100.000 135 0 0 1 135 430098101 430097967 1.530000e-62 250.0
4 TraesCS7D01G337200 chr7D 97.778 135 3 0 1 135 145240612 145240746 1.540000e-57 233.0
5 TraesCS7D01G337200 chr7A 90.386 1217 74 21 833 2012 502359923 502361133 0.000000e+00 1559.0
6 TraesCS7D01G337200 chr7A 90.231 737 45 12 907 1619 502621777 502622510 0.000000e+00 937.0
7 TraesCS7D01G337200 chr7A 95.402 87 4 0 2153 2239 502381567 502381653 3.460000e-29 139.0
8 TraesCS7D01G337200 chr7A 89.720 107 11 0 2133 2239 665376367 665376473 1.250000e-28 137.0
9 TraesCS7D01G337200 chr7A 90.000 70 6 1 2511 2579 502381651 502381720 3.540000e-14 89.8
10 TraesCS7D01G337200 chr7A 89.041 73 4 2 2511 2579 665376471 665376543 1.270000e-13 87.9
11 TraesCS7D01G337200 chr7A 94.231 52 3 0 783 834 502359851 502359902 2.130000e-11 80.5
12 TraesCS7D01G337200 chr7A 90.741 54 4 1 2527 2579 502623320 502623373 1.280000e-08 71.3
13 TraesCS7D01G337200 chr7B 92.099 886 48 10 770 1633 447478159 447477274 0.000000e+00 1229.0
14 TraesCS7D01G337200 chr7B 88.749 871 54 19 911 1749 386554221 386555079 0.000000e+00 1026.0
15 TraesCS7D01G337200 chr7B 89.008 837 53 15 947 1749 447219852 447219021 0.000000e+00 1000.0
16 TraesCS7D01G337200 chr7B 96.970 132 4 0 1 132 5328957 5329088 3.340000e-54 222.0
17 TraesCS7D01G337200 chr7B 96.970 132 4 0 1 132 735587768 735587899 3.340000e-54 222.0
18 TraesCS7D01G337200 chr7B 92.929 99 7 0 2133 2231 447476671 447476573 7.450000e-31 145.0
19 TraesCS7D01G337200 chr7B 95.652 69 3 0 2510 2578 447476562 447476494 7.550000e-21 111.0
20 TraesCS7D01G337200 chr1B 85.210 595 71 10 1005 1588 62527888 62528476 1.710000e-166 595.0
21 TraesCS7D01G337200 chr1B 85.473 296 34 7 2223 2514 558228116 558228406 1.500000e-77 300.0
22 TraesCS7D01G337200 chr1B 96.970 132 4 0 1 132 377839392 377839523 3.340000e-54 222.0
23 TraesCS7D01G337200 chr1D 85.142 599 67 15 1041 1622 42344580 42345173 6.150000e-166 593.0
24 TraesCS7D01G337200 chr1D 95.763 236 9 1 538 772 77645764 77645529 1.880000e-101 379.0
25 TraesCS7D01G337200 chr1D 85.616 292 32 5 1304 1588 42345742 42346030 5.400000e-77 298.0
26 TraesCS7D01G337200 chr1D 79.361 407 72 8 1154 1551 42767656 42767253 2.530000e-70 276.0
27 TraesCS7D01G337200 chr1A 82.234 546 83 11 1059 1594 42279933 42279392 2.340000e-125 459.0
28 TraesCS7D01G337200 chr1A 83.636 440 58 10 1043 1468 42258899 42258460 4.000000e-108 401.0
29 TraesCS7D01G337200 chr1A 96.296 135 5 0 1 135 65898379 65898245 3.340000e-54 222.0
30 TraesCS7D01G337200 chr3D 96.887 257 7 1 517 772 446118514 446118770 1.840000e-116 429.0
31 TraesCS7D01G337200 chr3D 97.590 249 5 1 525 772 39043712 39043960 2.370000e-115 425.0
32 TraesCS7D01G337200 chr3D 92.337 261 14 5 517 773 575557241 575556983 1.460000e-97 366.0
33 TraesCS7D01G337200 chr3D 85.000 280 38 3 2237 2512 416394115 416393836 5.440000e-72 281.0
34 TraesCS7D01G337200 chr3D 100.000 135 0 0 1 135 39043272 39043406 1.530000e-62 250.0
35 TraesCS7D01G337200 chr3D 97.778 135 3 0 1 135 446118328 446118462 1.540000e-57 233.0
36 TraesCS7D01G337200 chr2D 94.318 264 10 5 518 778 189944020 189944281 1.440000e-107 399.0
37 TraesCS7D01G337200 chr2D 94.553 257 9 5 517 770 12767957 12768211 2.410000e-105 392.0
38 TraesCS7D01G337200 chr2D 94.048 252 10 5 518 766 528526856 528527105 6.740000e-101 377.0
39 TraesCS7D01G337200 chr2D 85.714 294 36 5 2223 2512 70464031 70463740 3.230000e-79 305.0
40 TraesCS7D01G337200 chr5D 94.208 259 10 5 517 772 403417248 403417504 8.660000e-105 390.0
41 TraesCS7D01G337200 chr2B 84.983 293 29 7 2226 2514 453275093 453275374 1.510000e-72 283.0
42 TraesCS7D01G337200 chr3B 84.615 286 33 7 2233 2513 712995652 712995931 9.100000e-70 274.0
43 TraesCS7D01G337200 chr3B 83.667 300 32 9 2237 2520 370766609 370766311 1.520000e-67 267.0
44 TraesCS7D01G337200 chr3B 82.667 300 35 9 2237 2520 371336690 371336988 1.530000e-62 250.0
45 TraesCS7D01G337200 chr3B 82.101 257 38 5 2237 2489 802720929 802721181 2.010000e-51 213.0
46 TraesCS7D01G337200 chr3A 84.452 283 37 4 2237 2512 646683321 646683603 3.270000e-69 272.0
47 TraesCS7D01G337200 chr5B 82.578 287 35 8 2237 2512 270679391 270679673 3.320000e-59 239.0
48 TraesCS7D01G337200 chr4B 96.296 135 5 0 1 135 83305914 83305780 3.340000e-54 222.0
49 TraesCS7D01G337200 chr4A 96.296 135 5 0 1 135 642548703 642548569 3.340000e-54 222.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G337200 chr7D 430095520 430098101 2581 True 2033.00 3816 100.0000 1 2582 2 chr7D.!!$R3 2581
1 TraesCS7D01G337200 chr7D 429710314 429711400 1086 True 1051.00 1051 84.9910 947 1993 1 chr7D.!!$R2 1046
2 TraesCS7D01G337200 chr7A 502359851 502361133 1282 False 819.75 1559 92.3085 783 2012 2 chr7A.!!$F1 1229
3 TraesCS7D01G337200 chr7A 502621777 502623373 1596 False 504.15 937 90.4860 907 2579 2 chr7A.!!$F3 1672
4 TraesCS7D01G337200 chr7B 386554221 386555079 858 False 1026.00 1026 88.7490 911 1749 1 chr7B.!!$F2 838
5 TraesCS7D01G337200 chr7B 447219021 447219852 831 True 1000.00 1000 89.0080 947 1749 1 chr7B.!!$R1 802
6 TraesCS7D01G337200 chr7B 447476494 447478159 1665 True 495.00 1229 93.5600 770 2578 3 chr7B.!!$R2 1808
7 TraesCS7D01G337200 chr1B 62527888 62528476 588 False 595.00 595 85.2100 1005 1588 1 chr1B.!!$F1 583
8 TraesCS7D01G337200 chr1D 42344580 42346030 1450 False 445.50 593 85.3790 1041 1622 2 chr1D.!!$F1 581
9 TraesCS7D01G337200 chr1A 42279392 42279933 541 True 459.00 459 82.2340 1059 1594 1 chr1A.!!$R2 535
10 TraesCS7D01G337200 chr3D 39043272 39043960 688 False 337.50 425 98.7950 1 772 2 chr3D.!!$F1 771

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
547 548 0.031111 TGAGGTAGGGGATGGGTCTG 60.031 60.0 0.0 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2252 3105 0.032813 TCCGGACGGAGGGAGTATTT 60.033 55.0 9.76 0.0 39.76 1.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 3.995199 CTGTTGAAGCTGTTCTAGGTGA 58.005 45.455 0.00 0.00 37.17 4.02
36 37 3.728845 TGTTGAAGCTGTTCTAGGTGAC 58.271 45.455 0.00 0.00 37.17 3.67
37 38 2.724977 TGAAGCTGTTCTAGGTGACG 57.275 50.000 0.00 0.00 37.17 4.35
38 39 1.272490 TGAAGCTGTTCTAGGTGACGG 59.728 52.381 0.00 0.00 37.17 4.79
39 40 1.272769 GAAGCTGTTCTAGGTGACGGT 59.727 52.381 0.00 0.00 37.17 4.83
40 41 1.339097 AGCTGTTCTAGGTGACGGTT 58.661 50.000 0.00 0.00 35.38 4.44
41 42 1.000955 AGCTGTTCTAGGTGACGGTTG 59.999 52.381 0.00 0.00 35.38 3.77
42 43 1.429463 CTGTTCTAGGTGACGGTTGC 58.571 55.000 0.00 0.00 0.00 4.17
43 44 0.753867 TGTTCTAGGTGACGGTTGCA 59.246 50.000 0.00 0.00 0.00 4.08
44 45 1.139256 TGTTCTAGGTGACGGTTGCAA 59.861 47.619 0.00 0.00 0.00 4.08
45 46 1.529865 GTTCTAGGTGACGGTTGCAAC 59.470 52.381 21.59 21.59 0.00 4.17
46 47 0.753867 TCTAGGTGACGGTTGCAACA 59.246 50.000 29.55 7.67 0.00 3.33
47 48 0.865769 CTAGGTGACGGTTGCAACAC 59.134 55.000 29.55 18.82 0.00 3.32
48 49 0.466543 TAGGTGACGGTTGCAACACT 59.533 50.000 29.55 14.46 34.28 3.55
49 50 0.466543 AGGTGACGGTTGCAACACTA 59.533 50.000 29.55 10.95 34.28 2.74
50 51 0.865769 GGTGACGGTTGCAACACTAG 59.134 55.000 29.55 19.05 34.28 2.57
51 52 1.578583 GTGACGGTTGCAACACTAGT 58.421 50.000 29.55 21.81 0.00 2.57
52 53 2.546373 GGTGACGGTTGCAACACTAGTA 60.546 50.000 29.55 8.88 34.28 1.82
53 54 3.323243 GTGACGGTTGCAACACTAGTAT 58.677 45.455 29.55 7.43 0.00 2.12
54 55 4.487948 GTGACGGTTGCAACACTAGTATA 58.512 43.478 29.55 13.20 0.00 1.47
55 56 4.325472 GTGACGGTTGCAACACTAGTATAC 59.675 45.833 29.55 19.01 0.00 1.47
56 57 3.504863 ACGGTTGCAACACTAGTATACG 58.495 45.455 29.55 21.27 0.00 3.06
57 58 2.280708 CGGTTGCAACACTAGTATACGC 59.719 50.000 29.55 7.83 0.00 4.42
58 59 2.280708 GGTTGCAACACTAGTATACGCG 59.719 50.000 29.55 3.53 0.00 6.01
59 60 2.197792 TGCAACACTAGTATACGCGG 57.802 50.000 12.47 0.00 0.00 6.46
60 61 1.202325 TGCAACACTAGTATACGCGGG 60.202 52.381 12.47 0.00 0.00 6.13
61 62 1.484356 CAACACTAGTATACGCGGGC 58.516 55.000 12.47 0.00 0.00 6.13
62 63 1.066605 CAACACTAGTATACGCGGGCT 59.933 52.381 12.47 5.10 0.00 5.19
63 64 0.666913 ACACTAGTATACGCGGGCTG 59.333 55.000 12.47 0.00 0.00 4.85
64 65 0.663568 CACTAGTATACGCGGGCTGC 60.664 60.000 12.47 8.64 41.47 5.25
65 66 1.105167 ACTAGTATACGCGGGCTGCA 61.105 55.000 19.92 0.00 46.97 4.41
66 67 0.243907 CTAGTATACGCGGGCTGCAT 59.756 55.000 19.92 5.37 46.97 3.96
67 68 0.242825 TAGTATACGCGGGCTGCATC 59.757 55.000 19.92 3.28 46.97 3.91
68 69 2.027625 GTATACGCGGGCTGCATCC 61.028 63.158 19.92 0.00 46.97 3.51
69 70 2.503382 TATACGCGGGCTGCATCCA 61.503 57.895 19.92 0.00 46.97 3.41
70 71 2.434658 TATACGCGGGCTGCATCCAG 62.435 60.000 19.92 5.55 46.97 3.86
115 116 4.459089 GGTGAGGGAGCGCCTGAC 62.459 72.222 2.29 0.00 35.56 3.51
116 117 4.459089 GTGAGGGAGCGCCTGACC 62.459 72.222 2.29 0.61 0.00 4.02
533 534 2.357517 CGCGTGAAGGCTTGAGGT 60.358 61.111 3.46 0.00 0.00 3.85
534 535 1.080093 CGCGTGAAGGCTTGAGGTA 60.080 57.895 3.46 0.00 0.00 3.08
535 536 1.078759 CGCGTGAAGGCTTGAGGTAG 61.079 60.000 3.46 0.00 0.00 3.18
536 537 0.741221 GCGTGAAGGCTTGAGGTAGG 60.741 60.000 3.46 0.00 0.00 3.18
537 538 0.108138 CGTGAAGGCTTGAGGTAGGG 60.108 60.000 3.46 0.00 0.00 3.53
538 539 0.253327 GTGAAGGCTTGAGGTAGGGG 59.747 60.000 3.46 0.00 0.00 4.79
539 540 0.118346 TGAAGGCTTGAGGTAGGGGA 59.882 55.000 3.46 0.00 0.00 4.81
540 541 1.274416 TGAAGGCTTGAGGTAGGGGAT 60.274 52.381 3.46 0.00 0.00 3.85
541 542 1.141858 GAAGGCTTGAGGTAGGGGATG 59.858 57.143 3.46 0.00 0.00 3.51
542 543 0.695803 AGGCTTGAGGTAGGGGATGG 60.696 60.000 0.00 0.00 0.00 3.51
543 544 1.709994 GGCTTGAGGTAGGGGATGGG 61.710 65.000 0.00 0.00 0.00 4.00
544 545 0.988678 GCTTGAGGTAGGGGATGGGT 60.989 60.000 0.00 0.00 0.00 4.51
545 546 1.132500 CTTGAGGTAGGGGATGGGTC 58.868 60.000 0.00 0.00 0.00 4.46
546 547 0.722676 TTGAGGTAGGGGATGGGTCT 59.277 55.000 0.00 0.00 0.00 3.85
547 548 0.031111 TGAGGTAGGGGATGGGTCTG 60.031 60.000 0.00 0.00 0.00 3.51
548 549 0.764752 GAGGTAGGGGATGGGTCTGG 60.765 65.000 0.00 0.00 0.00 3.86
549 550 2.452937 GGTAGGGGATGGGTCTGGC 61.453 68.421 0.00 0.00 0.00 4.85
550 551 2.039831 TAGGGGATGGGTCTGGCC 60.040 66.667 0.00 0.00 0.00 5.36
551 552 2.967193 TAGGGGATGGGTCTGGCCA 61.967 63.158 4.71 4.71 39.65 5.36
552 553 2.284211 TAGGGGATGGGTCTGGCCAT 62.284 60.000 5.51 0.00 39.65 4.40
553 554 2.196776 GGGATGGGTCTGGCCATG 59.803 66.667 5.51 0.00 39.65 3.66
554 555 2.196776 GGATGGGTCTGGCCATGG 59.803 66.667 5.51 7.63 39.65 3.66
555 556 2.520260 GATGGGTCTGGCCATGGC 60.520 66.667 29.47 29.47 39.65 4.40
556 557 4.511246 ATGGGTCTGGCCATGGCG 62.511 66.667 29.90 17.63 43.06 5.69
578 579 2.360852 GCAGCCATGGCAGTCAGT 60.361 61.111 37.18 14.13 44.88 3.41
579 580 2.697761 GCAGCCATGGCAGTCAGTG 61.698 63.158 37.18 25.55 44.88 3.66
580 581 1.002990 CAGCCATGGCAGTCAGTGA 60.003 57.895 37.18 0.00 44.88 3.41
581 582 1.025113 CAGCCATGGCAGTCAGTGAG 61.025 60.000 37.18 11.82 44.88 3.51
582 583 1.748122 GCCATGGCAGTCAGTGAGG 60.748 63.158 32.08 0.00 41.49 3.86
583 584 1.077930 CCATGGCAGTCAGTGAGGG 60.078 63.158 0.00 0.00 0.00 4.30
584 585 1.077930 CATGGCAGTCAGTGAGGGG 60.078 63.158 0.00 0.00 0.00 4.79
585 586 1.229625 ATGGCAGTCAGTGAGGGGA 60.230 57.895 0.00 0.00 0.00 4.81
586 587 1.270414 ATGGCAGTCAGTGAGGGGAG 61.270 60.000 0.00 0.00 0.00 4.30
587 588 2.267324 GCAGTCAGTGAGGGGAGC 59.733 66.667 0.00 0.00 0.00 4.70
588 589 2.985456 CAGTCAGTGAGGGGAGCC 59.015 66.667 0.00 0.00 0.00 4.70
589 590 1.611851 CAGTCAGTGAGGGGAGCCT 60.612 63.158 0.00 0.00 0.00 4.58
590 591 1.611851 AGTCAGTGAGGGGAGCCTG 60.612 63.158 0.00 0.00 0.00 4.85
591 592 2.284921 TCAGTGAGGGGAGCCTGG 60.285 66.667 0.00 0.00 0.00 4.45
592 593 4.106925 CAGTGAGGGGAGCCTGGC 62.107 72.222 11.65 11.65 0.00 4.85
612 613 4.873129 CCGGCGATGGAGGTCGTG 62.873 72.222 9.30 0.00 43.27 4.35
613 614 4.873129 CGGCGATGGAGGTCGTGG 62.873 72.222 0.00 0.00 43.27 4.94
614 615 3.771160 GGCGATGGAGGTCGTGGT 61.771 66.667 0.00 0.00 43.27 4.16
615 616 2.509336 GCGATGGAGGTCGTGGTG 60.509 66.667 0.00 0.00 43.27 4.17
616 617 2.184322 CGATGGAGGTCGTGGTGG 59.816 66.667 0.00 0.00 36.88 4.61
617 618 2.125106 GATGGAGGTCGTGGTGGC 60.125 66.667 0.00 0.00 0.00 5.01
618 619 3.682292 GATGGAGGTCGTGGTGGCC 62.682 68.421 0.00 0.00 0.00 5.36
621 622 4.394712 GAGGTCGTGGTGGCCCAG 62.395 72.222 0.00 0.00 42.94 4.45
623 624 4.699522 GGTCGTGGTGGCCCAGTC 62.700 72.222 0.00 0.00 42.94 3.51
635 636 4.069232 CCAGTCGCAGCTCGGGAA 62.069 66.667 0.00 0.00 38.48 3.97
636 637 2.507992 CAGTCGCAGCTCGGGAAG 60.508 66.667 0.00 0.00 38.48 3.46
637 638 2.676822 AGTCGCAGCTCGGGAAGA 60.677 61.111 0.00 0.00 38.48 2.87
639 640 3.452786 TCGCAGCTCGGGAAGAGG 61.453 66.667 0.00 0.00 46.91 3.69
640 641 4.521062 CGCAGCTCGGGAAGAGGG 62.521 72.222 0.00 0.00 46.91 4.30
641 642 4.168291 GCAGCTCGGGAAGAGGGG 62.168 72.222 0.00 0.00 46.91 4.79
642 643 2.364317 CAGCTCGGGAAGAGGGGA 60.364 66.667 0.00 0.00 46.91 4.81
643 644 1.990060 CAGCTCGGGAAGAGGGGAA 60.990 63.158 0.00 0.00 46.91 3.97
644 645 1.687493 AGCTCGGGAAGAGGGGAAG 60.687 63.158 0.00 0.00 46.91 3.46
645 646 2.736826 GCTCGGGAAGAGGGGAAGG 61.737 68.421 0.00 0.00 46.91 3.46
646 647 2.040606 TCGGGAAGAGGGGAAGGG 59.959 66.667 0.00 0.00 0.00 3.95
647 648 2.040606 CGGGAAGAGGGGAAGGGA 59.959 66.667 0.00 0.00 0.00 4.20
648 649 1.384643 CGGGAAGAGGGGAAGGGAT 60.385 63.158 0.00 0.00 0.00 3.85
649 650 1.700042 CGGGAAGAGGGGAAGGGATG 61.700 65.000 0.00 0.00 0.00 3.51
650 651 1.356494 GGGAAGAGGGGAAGGGATGG 61.356 65.000 0.00 0.00 0.00 3.51
651 652 1.356494 GGAAGAGGGGAAGGGATGGG 61.356 65.000 0.00 0.00 0.00 4.00
652 653 1.309102 AAGAGGGGAAGGGATGGGG 60.309 63.158 0.00 0.00 0.00 4.96
653 654 1.848835 AAGAGGGGAAGGGATGGGGA 61.849 60.000 0.00 0.00 0.00 4.81
654 655 1.308746 GAGGGGAAGGGATGGGGAA 60.309 63.158 0.00 0.00 0.00 3.97
655 656 1.309102 AGGGGAAGGGATGGGGAAG 60.309 63.158 0.00 0.00 0.00 3.46
656 657 2.395353 GGGGAAGGGATGGGGAAGG 61.395 68.421 0.00 0.00 0.00 3.46
657 658 2.395353 GGGAAGGGATGGGGAAGGG 61.395 68.421 0.00 0.00 0.00 3.95
658 659 2.395353 GGAAGGGATGGGGAAGGGG 61.395 68.421 0.00 0.00 0.00 4.79
659 660 1.622752 GAAGGGATGGGGAAGGGGT 60.623 63.158 0.00 0.00 0.00 4.95
660 661 1.935931 AAGGGATGGGGAAGGGGTG 60.936 63.158 0.00 0.00 0.00 4.61
661 662 3.429580 GGGATGGGGAAGGGGTGG 61.430 72.222 0.00 0.00 0.00 4.61
662 663 3.429580 GGATGGGGAAGGGGTGGG 61.430 72.222 0.00 0.00 0.00 4.61
663 664 3.429580 GATGGGGAAGGGGTGGGG 61.430 72.222 0.00 0.00 0.00 4.96
664 665 3.980600 ATGGGGAAGGGGTGGGGA 61.981 66.667 0.00 0.00 0.00 4.81
665 666 3.990141 ATGGGGAAGGGGTGGGGAG 62.990 68.421 0.00 0.00 0.00 4.30
667 668 4.364686 GGGAAGGGGTGGGGAGGA 62.365 72.222 0.00 0.00 0.00 3.71
668 669 2.692741 GGAAGGGGTGGGGAGGAG 60.693 72.222 0.00 0.00 0.00 3.69
669 670 2.692741 GAAGGGGTGGGGAGGAGG 60.693 72.222 0.00 0.00 0.00 4.30
670 671 4.371231 AAGGGGTGGGGAGGAGGG 62.371 72.222 0.00 0.00 0.00 4.30
677 678 4.760220 GGGGAGGAGGGGGCAGAA 62.760 72.222 0.00 0.00 0.00 3.02
678 679 3.093172 GGGAGGAGGGGGCAGAAG 61.093 72.222 0.00 0.00 0.00 2.85
679 680 2.041265 GGAGGAGGGGGCAGAAGA 59.959 66.667 0.00 0.00 0.00 2.87
680 681 1.616628 GGAGGAGGGGGCAGAAGAA 60.617 63.158 0.00 0.00 0.00 2.52
681 682 1.631071 GGAGGAGGGGGCAGAAGAAG 61.631 65.000 0.00 0.00 0.00 2.85
682 683 0.618968 GAGGAGGGGGCAGAAGAAGA 60.619 60.000 0.00 0.00 0.00 2.87
683 684 0.178861 AGGAGGGGGCAGAAGAAGAA 60.179 55.000 0.00 0.00 0.00 2.52
684 685 0.254462 GGAGGGGGCAGAAGAAGAAG 59.746 60.000 0.00 0.00 0.00 2.85
685 686 1.280457 GAGGGGGCAGAAGAAGAAGA 58.720 55.000 0.00 0.00 0.00 2.87
686 687 1.209261 GAGGGGGCAGAAGAAGAAGAG 59.791 57.143 0.00 0.00 0.00 2.85
687 688 0.254462 GGGGGCAGAAGAAGAAGAGG 59.746 60.000 0.00 0.00 0.00 3.69
688 689 0.254462 GGGGCAGAAGAAGAAGAGGG 59.746 60.000 0.00 0.00 0.00 4.30
689 690 0.393673 GGGCAGAAGAAGAAGAGGGC 60.394 60.000 0.00 0.00 0.00 5.19
690 691 0.742635 GGCAGAAGAAGAAGAGGGCG 60.743 60.000 0.00 0.00 0.00 6.13
691 692 0.247736 GCAGAAGAAGAAGAGGGCGA 59.752 55.000 0.00 0.00 0.00 5.54
692 693 2.003196 CAGAAGAAGAAGAGGGCGAC 57.997 55.000 0.00 0.00 0.00 5.19
693 694 0.528470 AGAAGAAGAAGAGGGCGACG 59.472 55.000 0.00 0.00 0.00 5.12
694 695 1.079317 GAAGAAGAAGAGGGCGACGC 61.079 60.000 12.43 12.43 0.00 5.19
695 696 2.820767 AAGAAGAAGAGGGCGACGCG 62.821 60.000 14.61 3.53 0.00 6.01
709 710 2.876645 CGCGCTCGTGAAGGAGAC 60.877 66.667 5.56 0.00 36.08 3.36
710 711 2.876645 GCGCTCGTGAAGGAGACG 60.877 66.667 0.00 7.96 36.08 4.18
711 712 2.876645 CGCTCGTGAAGGAGACGC 60.877 66.667 4.26 0.00 36.08 5.19
712 713 2.876645 GCTCGTGAAGGAGACGCG 60.877 66.667 3.53 3.53 41.61 6.01
713 714 2.868196 CTCGTGAAGGAGACGCGA 59.132 61.111 15.93 0.00 45.51 5.87
714 715 2.868196 TCGTGAAGGAGACGCGAG 59.132 61.111 15.93 0.00 43.48 5.03
715 716 2.202492 CGTGAAGGAGACGCGAGG 60.202 66.667 15.93 0.00 42.62 4.63
716 717 2.687805 CGTGAAGGAGACGCGAGGA 61.688 63.158 15.93 0.00 42.62 3.71
717 718 1.585006 GTGAAGGAGACGCGAGGAA 59.415 57.895 15.93 0.00 0.00 3.36
718 719 0.456995 GTGAAGGAGACGCGAGGAAG 60.457 60.000 15.93 0.00 0.00 3.46
719 720 0.608308 TGAAGGAGACGCGAGGAAGA 60.608 55.000 15.93 0.00 0.00 2.87
720 721 0.099791 GAAGGAGACGCGAGGAAGAG 59.900 60.000 15.93 0.00 0.00 2.85
721 722 1.316706 AAGGAGACGCGAGGAAGAGG 61.317 60.000 15.93 0.00 0.00 3.69
722 723 2.776913 GGAGACGCGAGGAAGAGGG 61.777 68.421 15.93 0.00 0.00 4.30
723 724 1.749638 GAGACGCGAGGAAGAGGGA 60.750 63.158 15.93 0.00 0.00 4.20
724 725 1.720694 GAGACGCGAGGAAGAGGGAG 61.721 65.000 15.93 0.00 0.00 4.30
725 726 1.749638 GACGCGAGGAAGAGGGAGA 60.750 63.158 15.93 0.00 0.00 3.71
726 727 1.995646 GACGCGAGGAAGAGGGAGAC 61.996 65.000 15.93 0.00 0.00 3.36
737 738 3.728373 GGGAGACCGGCCCAATGT 61.728 66.667 10.56 0.00 45.31 2.71
738 739 2.355115 GGAGACCGGCCCAATGTT 59.645 61.111 0.00 0.00 0.00 2.71
739 740 1.304134 GGAGACCGGCCCAATGTTT 60.304 57.895 0.00 0.00 0.00 2.83
740 741 1.313091 GGAGACCGGCCCAATGTTTC 61.313 60.000 0.00 0.00 0.00 2.78
741 742 1.304134 AGACCGGCCCAATGTTTCC 60.304 57.895 0.00 0.00 0.00 3.13
742 743 2.675075 ACCGGCCCAATGTTTCCG 60.675 61.111 0.00 0.00 41.41 4.30
743 744 4.128388 CCGGCCCAATGTTTCCGC 62.128 66.667 0.00 0.00 40.49 5.54
744 745 4.128388 CGGCCCAATGTTTCCGCC 62.128 66.667 0.00 0.00 35.20 6.13
745 746 4.128388 GGCCCAATGTTTCCGCCG 62.128 66.667 0.00 0.00 0.00 6.46
746 747 4.128388 GCCCAATGTTTCCGCCGG 62.128 66.667 0.00 0.00 0.00 6.13
747 748 2.675075 CCCAATGTTTCCGCCGGT 60.675 61.111 1.63 0.00 0.00 5.28
748 749 2.566010 CCAATGTTTCCGCCGGTG 59.434 61.111 8.42 8.42 0.00 4.94
749 750 2.126502 CAATGTTTCCGCCGGTGC 60.127 61.111 10.27 0.00 0.00 5.01
750 751 3.370231 AATGTTTCCGCCGGTGCC 61.370 61.111 10.27 0.00 0.00 5.01
766 767 3.228017 CCCGGCCCCAAACGTTTT 61.228 61.111 11.66 0.00 0.00 2.43
767 768 2.337170 CCGGCCCCAAACGTTTTC 59.663 61.111 11.66 0.98 0.00 2.29
768 769 2.337170 CGGCCCCAAACGTTTTCC 59.663 61.111 11.66 9.23 0.00 3.13
794 795 3.990092 AGGAAATTTTCTTCCAAACCGC 58.010 40.909 8.93 0.00 46.38 5.68
798 799 2.478547 TTTTCTTCCAAACCGCGAAC 57.521 45.000 8.23 0.00 0.00 3.95
847 880 1.738099 CTTTGTCACCGCCTCTCCG 60.738 63.158 0.00 0.00 0.00 4.63
903 949 1.623542 ATATATCCCCCTTCCGCCGC 61.624 60.000 0.00 0.00 0.00 6.53
1083 1163 1.374947 CAAGAAGACCAAGGGGCGA 59.625 57.895 0.00 0.00 34.63 5.54
1560 2109 2.268920 GCCGACAAGATGCCCTCA 59.731 61.111 0.00 0.00 0.00 3.86
1633 2190 6.946340 TGCCAGTGTTCTTAGATCATCTTTA 58.054 36.000 0.00 0.00 0.00 1.85
1701 2310 7.500227 TGCTAGTACTGTACCGTGTAAGATTAT 59.500 37.037 14.05 0.00 0.00 1.28
1728 2339 7.148323 TGGATTATTGTTCACGAGTACAATTGG 60.148 37.037 19.36 0.00 41.22 3.16
1750 2362 7.739498 TGGAAGTTACTGGTTTCAAGATTAC 57.261 36.000 0.00 0.00 0.00 1.89
1751 2363 6.713450 TGGAAGTTACTGGTTTCAAGATTACC 59.287 38.462 0.00 0.00 0.00 2.85
1758 2375 6.993079 ACTGGTTTCAAGATTACCATTTTCC 58.007 36.000 0.00 0.00 40.89 3.13
1920 2568 2.844348 AGTAGGACAATCCGGAACCAAT 59.156 45.455 9.01 0.00 42.75 3.16
1949 2597 0.592637 CTTTCGAACATGCTGCACCA 59.407 50.000 3.57 0.00 0.00 4.17
1967 2615 1.396996 CCATTCGTAAAGGGCAAGACG 59.603 52.381 0.00 0.00 36.66 4.18
2012 2660 8.135529 CAGGACGAAAATAAAAGTTTCCTTTCT 58.864 33.333 11.89 3.91 40.01 2.52
2014 2662 9.309516 GGACGAAAATAAAAGTTTCCTTTCTTT 57.690 29.630 11.89 0.00 40.01 2.52
2024 2672 9.554395 AAAAGTTTCCTTTCTTTTCAAGAACAA 57.446 25.926 0.00 0.00 46.53 2.83
2025 2673 9.554395 AAAGTTTCCTTTCTTTTCAAGAACAAA 57.446 25.926 0.00 0.00 46.53 2.83
2026 2674 9.554395 AAGTTTCCTTTCTTTTCAAGAACAAAA 57.446 25.926 0.00 0.00 46.53 2.44
2027 2675 9.554395 AGTTTCCTTTCTTTTCAAGAACAAAAA 57.446 25.926 0.00 0.00 46.53 1.94
2028 2676 9.811655 GTTTCCTTTCTTTTCAAGAACAAAAAG 57.188 29.630 0.00 0.00 46.53 2.27
2029 2677 9.554395 TTTCCTTTCTTTTCAAGAACAAAAAGT 57.446 25.926 0.00 0.00 46.53 2.66
2030 2678 9.554395 TTCCTTTCTTTTCAAGAACAAAAAGTT 57.446 25.926 0.00 0.00 46.53 2.66
2031 2679 9.554395 TCCTTTCTTTTCAAGAACAAAAAGTTT 57.446 25.926 0.00 0.00 46.53 2.66
2032 2680 9.811655 CCTTTCTTTTCAAGAACAAAAAGTTTC 57.188 29.630 0.00 0.00 46.53 2.78
2033 2681 9.811655 CTTTCTTTTCAAGAACAAAAAGTTTCC 57.188 29.630 0.00 0.00 46.53 3.13
2034 2682 9.554395 TTTCTTTTCAAGAACAAAAAGTTTCCT 57.446 25.926 0.00 0.00 46.53 3.36
2049 2697 3.632145 AGTTTCCTTTCGAACATGTTGCT 59.368 39.130 17.58 0.00 0.00 3.91
2050 2698 3.624326 TTCCTTTCGAACATGTTGCTG 57.376 42.857 17.58 5.78 0.00 4.41
2053 2701 2.313234 CTTTCGAACATGTTGCTGCTG 58.687 47.619 17.58 0.00 0.00 4.41
2054 2702 1.592064 TTCGAACATGTTGCTGCTGA 58.408 45.000 17.58 1.24 0.00 4.26
2083 2775 5.934625 CCACTTGACATAGCTGAGTTAACTT 59.065 40.000 10.02 0.00 0.00 2.66
2090 2782 5.355350 ACATAGCTGAGTTAACTTCAATGCC 59.645 40.000 10.02 0.00 0.00 4.40
2119 2873 7.066766 GTCTAAATCTTCTGATTGCACCTTCAT 59.933 37.037 0.00 0.00 41.62 2.57
2135 2977 4.700213 ACCTTCATTTTGGACGTTGATAGG 59.300 41.667 0.00 1.42 0.00 2.57
2147 2989 5.241949 GGACGTTGATAGGTAGTCATGAGAT 59.758 44.000 0.00 0.00 33.84 2.75
2151 2993 7.085116 CGTTGATAGGTAGTCATGAGATAACC 58.915 42.308 0.00 1.48 33.74 2.85
2198 3051 2.642311 TCAGGCAATAGTGGAAGGAACA 59.358 45.455 0.00 0.00 0.00 3.18
2220 3073 3.855689 ACTGGCATGCATTCAGTTAAC 57.144 42.857 21.36 0.00 38.44 2.01
2231 3084 6.205784 TGCATTCAGTTAACTTGCAAGTAAC 58.794 36.000 31.31 28.58 40.11 2.50
2234 3087 7.061094 GCATTCAGTTAACTTGCAAGTAACATC 59.939 37.037 31.31 18.80 38.57 3.06
2245 3098 4.141711 TGCAAGTAACATCATACTCCCTCC 60.142 45.833 0.00 0.00 35.09 4.30
2248 3101 4.287552 AGTAACATCATACTCCCTCCGTT 58.712 43.478 0.00 0.00 30.26 4.44
2251 3104 2.320781 CATCATACTCCCTCCGTTCCT 58.679 52.381 0.00 0.00 0.00 3.36
2252 3105 3.117246 ACATCATACTCCCTCCGTTCCTA 60.117 47.826 0.00 0.00 0.00 2.94
2257 3110 5.537674 TCATACTCCCTCCGTTCCTAAATAC 59.462 44.000 0.00 0.00 0.00 1.89
2258 3111 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
2259 3112 3.959449 ACTCCCTCCGTTCCTAAATACTC 59.041 47.826 0.00 0.00 0.00 2.59
2260 3113 3.303049 TCCCTCCGTTCCTAAATACTCC 58.697 50.000 0.00 0.00 0.00 3.85
2261 3114 2.367894 CCCTCCGTTCCTAAATACTCCC 59.632 54.545 0.00 0.00 0.00 4.30
2262 3115 3.306613 CCTCCGTTCCTAAATACTCCCT 58.693 50.000 0.00 0.00 0.00 4.20
2263 3116 3.321396 CCTCCGTTCCTAAATACTCCCTC 59.679 52.174 0.00 0.00 0.00 4.30
2264 3117 3.303049 TCCGTTCCTAAATACTCCCTCC 58.697 50.000 0.00 0.00 0.00 4.30
2265 3118 2.035576 CCGTTCCTAAATACTCCCTCCG 59.964 54.545 0.00 0.00 0.00 4.63
2267 3120 3.243334 CGTTCCTAAATACTCCCTCCGTC 60.243 52.174 0.00 0.00 0.00 4.79
2268 3121 2.954792 TCCTAAATACTCCCTCCGTCC 58.045 52.381 0.00 0.00 0.00 4.79
2270 3123 1.612463 CTAAATACTCCCTCCGTCCGG 59.388 57.143 0.00 0.00 0.00 5.14
2273 3126 0.187851 ATACTCCCTCCGTCCGGAAT 59.812 55.000 5.23 0.00 44.66 3.01
2274 3127 0.032813 TACTCCCTCCGTCCGGAATT 60.033 55.000 5.23 0.00 44.66 2.17
2275 3128 0.032813 ACTCCCTCCGTCCGGAATTA 60.033 55.000 5.23 0.00 44.66 1.40
2276 3129 0.388294 CTCCCTCCGTCCGGAATTAC 59.612 60.000 5.23 0.00 44.66 1.89
2277 3130 0.032813 TCCCTCCGTCCGGAATTACT 60.033 55.000 5.23 0.00 44.66 2.24
2278 3131 0.828677 CCCTCCGTCCGGAATTACTT 59.171 55.000 5.23 0.00 44.66 2.24
2279 3132 1.472728 CCCTCCGTCCGGAATTACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2280 3133 1.206371 CCTCCGTCCGGAATTACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2281 3134 2.537401 CTCCGTCCGGAATTACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2282 3135 1.135315 TCCGTCCGGAATTACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
2283 3136 0.643820 CGTCCGGAATTACTTGTCGC 59.356 55.000 5.23 0.00 0.00 5.19
2284 3137 1.004595 GTCCGGAATTACTTGTCGCC 58.995 55.000 5.23 0.00 0.00 5.54
2285 3138 0.458889 TCCGGAATTACTTGTCGCCG 60.459 55.000 0.00 0.00 38.54 6.46
2286 3139 0.458889 CCGGAATTACTTGTCGCCGA 60.459 55.000 0.00 0.00 41.11 5.54
2287 3140 1.352114 CGGAATTACTTGTCGCCGAA 58.648 50.000 0.00 0.00 41.11 4.30
2288 3141 1.727880 CGGAATTACTTGTCGCCGAAA 59.272 47.619 0.00 0.00 41.11 3.46
2289 3142 2.350498 CGGAATTACTTGTCGCCGAAAT 59.650 45.455 0.00 0.00 41.11 2.17
2290 3143 3.680789 GGAATTACTTGTCGCCGAAATG 58.319 45.455 0.00 0.00 0.00 2.32
2291 3144 3.486875 GGAATTACTTGTCGCCGAAATGG 60.487 47.826 0.00 0.00 42.50 3.16
2292 3145 2.459060 TTACTTGTCGCCGAAATGGA 57.541 45.000 0.00 0.00 42.00 3.41
2293 3146 2.684001 TACTTGTCGCCGAAATGGAT 57.316 45.000 0.00 0.00 42.00 3.41
2294 3147 2.684001 ACTTGTCGCCGAAATGGATA 57.316 45.000 0.00 0.00 42.00 2.59
2295 3148 2.980568 ACTTGTCGCCGAAATGGATAA 58.019 42.857 0.00 0.00 42.00 1.75
2296 3149 3.340034 ACTTGTCGCCGAAATGGATAAA 58.660 40.909 0.00 0.00 42.00 1.40
2297 3150 3.754323 ACTTGTCGCCGAAATGGATAAAA 59.246 39.130 0.00 0.00 42.00 1.52
2298 3151 4.216687 ACTTGTCGCCGAAATGGATAAAAA 59.783 37.500 0.00 0.00 42.00 1.94
2299 3152 4.974368 TGTCGCCGAAATGGATAAAAAT 57.026 36.364 0.00 0.00 42.00 1.82
2300 3153 4.667262 TGTCGCCGAAATGGATAAAAATG 58.333 39.130 0.00 0.00 42.00 2.32
2301 3154 4.041723 GTCGCCGAAATGGATAAAAATGG 58.958 43.478 0.00 0.00 42.00 3.16
2302 3155 3.948473 TCGCCGAAATGGATAAAAATGGA 59.052 39.130 0.00 0.00 42.00 3.41
2303 3156 4.582656 TCGCCGAAATGGATAAAAATGGAT 59.417 37.500 0.00 0.00 42.00 3.41
2304 3157 4.681025 CGCCGAAATGGATAAAAATGGATG 59.319 41.667 0.00 0.00 42.00 3.51
2305 3158 5.600696 GCCGAAATGGATAAAAATGGATGT 58.399 37.500 0.00 0.00 42.00 3.06
2306 3159 6.514212 CGCCGAAATGGATAAAAATGGATGTA 60.514 38.462 0.00 0.00 42.00 2.29
2307 3160 7.378181 GCCGAAATGGATAAAAATGGATGTAT 58.622 34.615 0.00 0.00 42.00 2.29
2308 3161 7.542130 GCCGAAATGGATAAAAATGGATGTATC 59.458 37.037 0.00 0.00 42.00 2.24
2309 3162 8.796475 CCGAAATGGATAAAAATGGATGTATCT 58.204 33.333 0.00 0.00 42.00 1.98
2347 3200 8.948631 TGTCTAGATACATCCATTTCTTTGAC 57.051 34.615 0.00 0.00 0.00 3.18
2348 3201 8.539544 TGTCTAGATACATCCATTTCTTTGACA 58.460 33.333 0.00 0.00 32.89 3.58
2349 3202 9.383519 GTCTAGATACATCCATTTCTTTGACAA 57.616 33.333 0.00 0.00 0.00 3.18
2350 3203 9.605275 TCTAGATACATCCATTTCTTTGACAAG 57.395 33.333 0.00 0.00 0.00 3.16
2351 3204 9.388506 CTAGATACATCCATTTCTTTGACAAGT 57.611 33.333 0.00 0.00 0.00 3.16
2353 3206 9.911788 AGATACATCCATTTCTTTGACAAGTAT 57.088 29.630 0.00 0.00 0.00 2.12
2357 3210 9.696917 ACATCCATTTCTTTGACAAGTATTTTC 57.303 29.630 0.00 0.00 0.00 2.29
2358 3211 8.853345 CATCCATTTCTTTGACAAGTATTTTCG 58.147 33.333 0.00 0.00 0.00 3.46
2359 3212 7.367285 TCCATTTCTTTGACAAGTATTTTCGG 58.633 34.615 0.00 0.00 0.00 4.30
2360 3213 7.229707 TCCATTTCTTTGACAAGTATTTTCGGA 59.770 33.333 0.00 0.00 0.00 4.55
2361 3214 7.326063 CCATTTCTTTGACAAGTATTTTCGGAC 59.674 37.037 0.00 0.00 0.00 4.79
2362 3215 5.585500 TCTTTGACAAGTATTTTCGGACG 57.415 39.130 0.00 0.00 0.00 4.79
2363 3216 4.449743 TCTTTGACAAGTATTTTCGGACGG 59.550 41.667 0.00 0.00 0.00 4.79
2364 3217 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2365 3218 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2366 3219 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2367 3220 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2368 3221 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2369 3222 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2370 3223 0.462789 TATTTTCGGACGGAGGGAGC 59.537 55.000 0.00 0.00 0.00 4.70
2371 3224 1.550130 ATTTTCGGACGGAGGGAGCA 61.550 55.000 0.00 0.00 0.00 4.26
2372 3225 2.444700 TTTTCGGACGGAGGGAGCAC 62.445 60.000 0.00 0.00 0.00 4.40
2373 3226 4.671590 TCGGACGGAGGGAGCACA 62.672 66.667 0.00 0.00 0.00 4.57
2374 3227 3.691342 CGGACGGAGGGAGCACAA 61.691 66.667 0.00 0.00 0.00 3.33
2375 3228 2.266055 GGACGGAGGGAGCACAAG 59.734 66.667 0.00 0.00 0.00 3.16
2376 3229 2.584391 GGACGGAGGGAGCACAAGT 61.584 63.158 0.00 0.00 0.00 3.16
2377 3230 1.079750 GACGGAGGGAGCACAAGTC 60.080 63.158 0.00 0.00 0.00 3.01
2378 3231 1.534235 ACGGAGGGAGCACAAGTCT 60.534 57.895 0.00 0.00 0.00 3.24
2379 3232 1.122019 ACGGAGGGAGCACAAGTCTT 61.122 55.000 0.00 0.00 0.00 3.01
2380 3233 0.035458 CGGAGGGAGCACAAGTCTTT 59.965 55.000 0.00 0.00 0.00 2.52
2381 3234 1.814793 GGAGGGAGCACAAGTCTTTC 58.185 55.000 0.00 0.00 0.00 2.62
2382 3235 1.349357 GGAGGGAGCACAAGTCTTTCT 59.651 52.381 0.00 0.00 0.00 2.52
2383 3236 2.567615 GGAGGGAGCACAAGTCTTTCTA 59.432 50.000 0.00 0.00 0.00 2.10
2384 3237 3.368948 GGAGGGAGCACAAGTCTTTCTAG 60.369 52.174 0.00 0.00 0.00 2.43
2385 3238 3.511477 AGGGAGCACAAGTCTTTCTAGA 58.489 45.455 0.00 0.00 0.00 2.43
2386 3239 3.513515 AGGGAGCACAAGTCTTTCTAGAG 59.486 47.826 0.00 0.00 0.00 2.43
2387 3240 3.511934 GGGAGCACAAGTCTTTCTAGAGA 59.488 47.826 0.00 0.00 0.00 3.10
2388 3241 4.161377 GGGAGCACAAGTCTTTCTAGAGAT 59.839 45.833 0.00 0.00 0.00 2.75
2389 3242 5.337975 GGGAGCACAAGTCTTTCTAGAGATT 60.338 44.000 0.00 0.00 0.00 2.40
2390 3243 5.810074 GGAGCACAAGTCTTTCTAGAGATTC 59.190 44.000 0.00 0.00 0.00 2.52
2391 3244 5.729510 AGCACAAGTCTTTCTAGAGATTCC 58.270 41.667 0.00 0.00 0.00 3.01
2392 3245 5.247110 AGCACAAGTCTTTCTAGAGATTCCA 59.753 40.000 0.00 0.00 0.00 3.53
2393 3246 5.934625 GCACAAGTCTTTCTAGAGATTCCAA 59.065 40.000 0.00 0.00 0.00 3.53
2394 3247 6.128418 GCACAAGTCTTTCTAGAGATTCCAAC 60.128 42.308 0.00 0.00 0.00 3.77
2395 3248 6.931281 CACAAGTCTTTCTAGAGATTCCAACA 59.069 38.462 0.00 0.00 0.00 3.33
2396 3249 7.442364 CACAAGTCTTTCTAGAGATTCCAACAA 59.558 37.037 0.00 0.00 0.00 2.83
2397 3250 7.659390 ACAAGTCTTTCTAGAGATTCCAACAAG 59.341 37.037 0.00 0.00 0.00 3.16
2398 3251 7.309770 AGTCTTTCTAGAGATTCCAACAAGT 57.690 36.000 0.00 0.00 0.00 3.16
2399 3252 8.423906 AGTCTTTCTAGAGATTCCAACAAGTA 57.576 34.615 0.00 0.00 0.00 2.24
2400 3253 9.041354 AGTCTTTCTAGAGATTCCAACAAGTAT 57.959 33.333 0.00 0.00 0.00 2.12
2406 3259 9.011095 TCTAGAGATTCCAACAAGTATATACGG 57.989 37.037 7.23 6.64 0.00 4.02
2407 3260 7.834881 AGAGATTCCAACAAGTATATACGGA 57.165 36.000 7.23 4.99 0.00 4.69
2408 3261 7.887381 AGAGATTCCAACAAGTATATACGGAG 58.113 38.462 7.23 4.34 0.00 4.63
2409 3262 6.456501 AGATTCCAACAAGTATATACGGAGC 58.543 40.000 7.23 4.57 0.00 4.70
2410 3263 5.601583 TTCCAACAAGTATATACGGAGCA 57.398 39.130 7.23 0.00 0.00 4.26
2411 3264 5.601583 TCCAACAAGTATATACGGAGCAA 57.398 39.130 7.23 0.00 0.00 3.91
2412 3265 5.979993 TCCAACAAGTATATACGGAGCAAA 58.020 37.500 7.23 0.00 0.00 3.68
2413 3266 6.408035 TCCAACAAGTATATACGGAGCAAAA 58.592 36.000 7.23 0.00 0.00 2.44
2414 3267 7.051623 TCCAACAAGTATATACGGAGCAAAAT 58.948 34.615 7.23 0.00 0.00 1.82
2415 3268 7.011950 TCCAACAAGTATATACGGAGCAAAATG 59.988 37.037 7.23 0.85 0.00 2.32
2416 3269 7.011950 CCAACAAGTATATACGGAGCAAAATGA 59.988 37.037 7.23 0.00 0.00 2.57
2417 3270 7.715265 ACAAGTATATACGGAGCAAAATGAG 57.285 36.000 7.23 0.00 0.00 2.90
2418 3271 7.272978 ACAAGTATATACGGAGCAAAATGAGT 58.727 34.615 7.23 0.00 0.00 3.41
2419 3272 8.418662 ACAAGTATATACGGAGCAAAATGAGTA 58.581 33.333 7.23 0.00 0.00 2.59
2420 3273 9.256477 CAAGTATATACGGAGCAAAATGAGTAA 57.744 33.333 7.23 0.00 0.00 2.24
2421 3274 9.826574 AAGTATATACGGAGCAAAATGAGTAAA 57.173 29.630 7.23 0.00 0.00 2.01
2422 3275 9.998106 AGTATATACGGAGCAAAATGAGTAAAT 57.002 29.630 7.23 0.00 0.00 1.40
2426 3279 6.663944 ACGGAGCAAAATGAGTAAATCTAC 57.336 37.500 0.00 0.00 0.00 2.59
2427 3280 6.170506 ACGGAGCAAAATGAGTAAATCTACA 58.829 36.000 0.00 0.00 0.00 2.74
2428 3281 6.092259 ACGGAGCAAAATGAGTAAATCTACAC 59.908 38.462 0.00 0.00 0.00 2.90
2429 3282 6.313905 CGGAGCAAAATGAGTAAATCTACACT 59.686 38.462 0.00 0.00 0.00 3.55
2430 3283 7.464710 CGGAGCAAAATGAGTAAATCTACACTC 60.465 40.741 0.00 0.00 41.31 3.51
2431 3284 7.550906 GGAGCAAAATGAGTAAATCTACACTCT 59.449 37.037 3.65 0.00 41.46 3.24
2432 3285 9.587772 GAGCAAAATGAGTAAATCTACACTCTA 57.412 33.333 3.65 0.00 41.46 2.43
2433 3286 9.944376 AGCAAAATGAGTAAATCTACACTCTAA 57.056 29.630 3.65 0.00 41.46 2.10
2451 3304 9.587772 ACACTCTAAAACATGTCTACATACATC 57.412 33.333 0.00 0.00 38.01 3.06
2452 3305 9.809096 CACTCTAAAACATGTCTACATACATCT 57.191 33.333 0.00 0.00 38.01 2.90
2453 3306 9.809096 ACTCTAAAACATGTCTACATACATCTG 57.191 33.333 0.00 0.00 38.01 2.90
2454 3307 9.809096 CTCTAAAACATGTCTACATACATCTGT 57.191 33.333 0.00 0.00 38.01 3.41
2475 3328 8.862325 TCTGTATGTTGTAGTCCATTTGAAAT 57.138 30.769 0.00 0.00 0.00 2.17
2481 3334 8.684386 TGTTGTAGTCCATTTGAAATGTCTAA 57.316 30.769 15.93 4.89 0.00 2.10
2537 3498 9.751542 ACATGAGTAATGCACTAATTCTAGTAC 57.248 33.333 0.00 0.00 40.22 2.73
2538 3499 8.906693 CATGAGTAATGCACTAATTCTAGTACG 58.093 37.037 0.00 0.00 37.72 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 3.743396 GTCACCTAGAACAGCTTCAACAG 59.257 47.826 0.00 0.00 0.00 3.16
15 16 3.728845 GTCACCTAGAACAGCTTCAACA 58.271 45.455 0.00 0.00 0.00 3.33
16 17 2.731976 CGTCACCTAGAACAGCTTCAAC 59.268 50.000 0.00 0.00 0.00 3.18
17 18 2.288825 CCGTCACCTAGAACAGCTTCAA 60.289 50.000 0.00 0.00 0.00 2.69
18 19 1.272490 CCGTCACCTAGAACAGCTTCA 59.728 52.381 0.00 0.00 0.00 3.02
19 20 1.272769 ACCGTCACCTAGAACAGCTTC 59.727 52.381 0.00 0.00 0.00 3.86
20 21 1.339097 ACCGTCACCTAGAACAGCTT 58.661 50.000 0.00 0.00 0.00 3.74
21 22 1.000955 CAACCGTCACCTAGAACAGCT 59.999 52.381 0.00 0.00 0.00 4.24
22 23 1.429463 CAACCGTCACCTAGAACAGC 58.571 55.000 0.00 0.00 0.00 4.40
23 24 1.270094 TGCAACCGTCACCTAGAACAG 60.270 52.381 0.00 0.00 0.00 3.16
24 25 0.753867 TGCAACCGTCACCTAGAACA 59.246 50.000 0.00 0.00 0.00 3.18
25 26 1.529865 GTTGCAACCGTCACCTAGAAC 59.470 52.381 19.15 0.00 0.00 3.01
26 27 1.139256 TGTTGCAACCGTCACCTAGAA 59.861 47.619 26.14 0.21 0.00 2.10
27 28 0.753867 TGTTGCAACCGTCACCTAGA 59.246 50.000 26.14 0.76 0.00 2.43
28 29 0.865769 GTGTTGCAACCGTCACCTAG 59.134 55.000 26.14 0.00 0.00 3.02
29 30 0.466543 AGTGTTGCAACCGTCACCTA 59.533 50.000 26.14 2.32 0.00 3.08
30 31 0.466543 TAGTGTTGCAACCGTCACCT 59.533 50.000 26.14 13.79 0.00 4.00
31 32 0.865769 CTAGTGTTGCAACCGTCACC 59.134 55.000 26.14 7.59 0.00 4.02
32 33 1.578583 ACTAGTGTTGCAACCGTCAC 58.421 50.000 26.14 17.20 0.00 3.67
33 34 3.671008 ATACTAGTGTTGCAACCGTCA 57.329 42.857 26.14 5.18 0.00 4.35
34 35 3.545078 CGTATACTAGTGTTGCAACCGTC 59.455 47.826 26.14 16.01 0.00 4.79
35 36 3.504863 CGTATACTAGTGTTGCAACCGT 58.495 45.455 26.14 18.51 0.00 4.83
36 37 2.280708 GCGTATACTAGTGTTGCAACCG 59.719 50.000 26.14 18.57 0.00 4.44
37 38 2.280708 CGCGTATACTAGTGTTGCAACC 59.719 50.000 26.14 17.03 0.00 3.77
38 39 2.280708 CCGCGTATACTAGTGTTGCAAC 59.719 50.000 22.83 22.83 0.00 4.17
39 40 2.532235 CCGCGTATACTAGTGTTGCAA 58.468 47.619 5.39 0.00 0.00 4.08
40 41 1.202325 CCCGCGTATACTAGTGTTGCA 60.202 52.381 5.39 0.00 0.00 4.08
41 42 1.484356 CCCGCGTATACTAGTGTTGC 58.516 55.000 5.39 6.08 0.00 4.17
42 43 1.066605 AGCCCGCGTATACTAGTGTTG 59.933 52.381 5.39 0.00 0.00 3.33
43 44 1.066605 CAGCCCGCGTATACTAGTGTT 59.933 52.381 5.39 0.00 0.00 3.32
44 45 0.666913 CAGCCCGCGTATACTAGTGT 59.333 55.000 5.39 0.39 0.00 3.55
45 46 0.663568 GCAGCCCGCGTATACTAGTG 60.664 60.000 5.39 0.00 0.00 2.74
46 47 1.105167 TGCAGCCCGCGTATACTAGT 61.105 55.000 4.92 0.00 46.97 2.57
47 48 0.243907 ATGCAGCCCGCGTATACTAG 59.756 55.000 4.92 0.00 46.97 2.57
48 49 0.242825 GATGCAGCCCGCGTATACTA 59.757 55.000 4.92 0.00 46.97 1.82
49 50 1.006102 GATGCAGCCCGCGTATACT 60.006 57.895 4.92 0.00 46.97 2.12
50 51 2.027625 GGATGCAGCCCGCGTATAC 61.028 63.158 10.76 0.00 46.97 1.47
51 52 2.342279 GGATGCAGCCCGCGTATA 59.658 61.111 10.76 0.00 46.97 1.47
52 53 3.814615 CTGGATGCAGCCCGCGTAT 62.815 63.158 20.33 0.00 46.97 3.06
53 54 4.529219 CTGGATGCAGCCCGCGTA 62.529 66.667 20.33 0.00 46.97 4.42
60 61 2.441532 ACCATGGCTGGATGCAGC 60.442 61.111 29.26 29.26 46.37 5.25
61 62 2.125326 CCACCATGGCTGGATGCAG 61.125 63.158 22.11 10.32 46.37 4.41
62 63 2.043752 CCACCATGGCTGGATGCA 60.044 61.111 22.11 0.00 46.37 3.96
98 99 4.459089 GTCAGGCGCTCCCTCACC 62.459 72.222 7.64 0.00 44.09 4.02
99 100 4.459089 GGTCAGGCGCTCCCTCAC 62.459 72.222 7.64 0.00 44.09 3.51
516 517 1.078759 CTACCTCAAGCCTTCACGCG 61.079 60.000 3.53 3.53 0.00 6.01
517 518 0.741221 CCTACCTCAAGCCTTCACGC 60.741 60.000 0.00 0.00 0.00 5.34
518 519 0.108138 CCCTACCTCAAGCCTTCACG 60.108 60.000 0.00 0.00 0.00 4.35
519 520 0.253327 CCCCTACCTCAAGCCTTCAC 59.747 60.000 0.00 0.00 0.00 3.18
520 521 0.118346 TCCCCTACCTCAAGCCTTCA 59.882 55.000 0.00 0.00 0.00 3.02
521 522 1.141858 CATCCCCTACCTCAAGCCTTC 59.858 57.143 0.00 0.00 0.00 3.46
522 523 1.216990 CATCCCCTACCTCAAGCCTT 58.783 55.000 0.00 0.00 0.00 4.35
523 524 0.695803 CCATCCCCTACCTCAAGCCT 60.696 60.000 0.00 0.00 0.00 4.58
524 525 1.709994 CCCATCCCCTACCTCAAGCC 61.710 65.000 0.00 0.00 0.00 4.35
525 526 0.988678 ACCCATCCCCTACCTCAAGC 60.989 60.000 0.00 0.00 0.00 4.01
526 527 1.132500 GACCCATCCCCTACCTCAAG 58.868 60.000 0.00 0.00 0.00 3.02
527 528 0.722676 AGACCCATCCCCTACCTCAA 59.277 55.000 0.00 0.00 0.00 3.02
528 529 0.031111 CAGACCCATCCCCTACCTCA 60.031 60.000 0.00 0.00 0.00 3.86
529 530 0.764752 CCAGACCCATCCCCTACCTC 60.765 65.000 0.00 0.00 0.00 3.85
530 531 1.318380 CCAGACCCATCCCCTACCT 59.682 63.158 0.00 0.00 0.00 3.08
531 532 2.452937 GCCAGACCCATCCCCTACC 61.453 68.421 0.00 0.00 0.00 3.18
532 533 2.452937 GGCCAGACCCATCCCCTAC 61.453 68.421 0.00 0.00 0.00 3.18
533 534 2.039831 GGCCAGACCCATCCCCTA 60.040 66.667 0.00 0.00 0.00 3.53
534 535 3.683017 ATGGCCAGACCCATCCCCT 62.683 63.158 13.05 0.00 41.75 4.79
535 536 3.105928 ATGGCCAGACCCATCCCC 61.106 66.667 13.05 0.00 41.75 4.81
536 537 2.196776 CATGGCCAGACCCATCCC 59.803 66.667 13.05 0.00 43.63 3.85
537 538 2.196776 CCATGGCCAGACCCATCC 59.803 66.667 13.05 0.00 43.63 3.51
538 539 2.520260 GCCATGGCCAGACCCATC 60.520 66.667 27.24 0.00 43.63 3.51
539 540 4.511246 CGCCATGGCCAGACCCAT 62.511 66.667 30.79 0.00 46.35 4.00
558 559 3.138798 GACTGCCATGGCTGCCTG 61.139 66.667 35.67 22.47 42.60 4.85
559 560 3.640257 CTGACTGCCATGGCTGCCT 62.640 63.158 35.67 22.07 42.60 4.75
560 561 3.138798 CTGACTGCCATGGCTGCC 61.139 66.667 35.67 28.54 42.60 4.85
561 562 2.360852 ACTGACTGCCATGGCTGC 60.361 61.111 35.67 28.28 42.60 5.25
562 563 1.002990 TCACTGACTGCCATGGCTG 60.003 57.895 34.54 34.54 44.06 4.85
563 564 1.298993 CTCACTGACTGCCATGGCT 59.701 57.895 35.53 18.67 42.51 4.75
564 565 1.748122 CCTCACTGACTGCCATGGC 60.748 63.158 30.54 30.54 42.35 4.40
565 566 1.077930 CCCTCACTGACTGCCATGG 60.078 63.158 7.63 7.63 0.00 3.66
566 567 1.077930 CCCCTCACTGACTGCCATG 60.078 63.158 0.00 0.00 0.00 3.66
567 568 1.229625 TCCCCTCACTGACTGCCAT 60.230 57.895 0.00 0.00 0.00 4.40
568 569 1.915266 CTCCCCTCACTGACTGCCA 60.915 63.158 0.00 0.00 0.00 4.92
569 570 2.985456 CTCCCCTCACTGACTGCC 59.015 66.667 0.00 0.00 0.00 4.85
570 571 2.267324 GCTCCCCTCACTGACTGC 59.733 66.667 0.00 0.00 0.00 4.40
571 572 1.611851 AGGCTCCCCTCACTGACTG 60.612 63.158 0.00 0.00 36.46 3.51
572 573 1.611851 CAGGCTCCCCTCACTGACT 60.612 63.158 0.00 0.00 40.33 3.41
573 574 2.664081 CCAGGCTCCCCTCACTGAC 61.664 68.421 0.00 0.00 40.33 3.51
574 575 2.284921 CCAGGCTCCCCTCACTGA 60.285 66.667 0.00 0.00 40.33 3.41
575 576 4.106925 GCCAGGCTCCCCTCACTG 62.107 72.222 3.29 0.00 40.33 3.66
595 596 4.873129 CACGACCTCCATCGCCGG 62.873 72.222 0.00 0.00 46.22 6.13
596 597 4.873129 CCACGACCTCCATCGCCG 62.873 72.222 0.00 0.00 46.22 6.46
597 598 3.771160 ACCACGACCTCCATCGCC 61.771 66.667 0.00 0.00 46.22 5.54
598 599 2.509336 CACCACGACCTCCATCGC 60.509 66.667 0.00 0.00 46.22 4.58
600 601 2.125106 GCCACCACGACCTCCATC 60.125 66.667 0.00 0.00 0.00 3.51
601 602 3.717294 GGCCACCACGACCTCCAT 61.717 66.667 0.00 0.00 0.00 3.41
604 605 4.394712 CTGGGCCACCACGACCTC 62.395 72.222 0.00 0.00 43.37 3.85
606 607 4.699522 GACTGGGCCACCACGACC 62.700 72.222 0.00 0.00 43.37 4.79
618 619 3.997064 CTTCCCGAGCTGCGACTGG 62.997 68.421 0.00 0.00 44.57 4.00
619 620 2.507992 CTTCCCGAGCTGCGACTG 60.508 66.667 0.00 0.00 44.57 3.51
620 621 2.676822 TCTTCCCGAGCTGCGACT 60.677 61.111 0.00 0.00 44.57 4.18
621 622 2.202676 CTCTTCCCGAGCTGCGAC 60.203 66.667 0.00 0.00 44.57 5.19
622 623 3.452786 CCTCTTCCCGAGCTGCGA 61.453 66.667 0.00 0.00 44.57 5.10
623 624 4.521062 CCCTCTTCCCGAGCTGCG 62.521 72.222 0.00 0.00 38.49 5.18
624 625 4.168291 CCCCTCTTCCCGAGCTGC 62.168 72.222 0.00 0.00 38.49 5.25
625 626 1.965754 CTTCCCCTCTTCCCGAGCTG 61.966 65.000 0.00 0.00 38.49 4.24
626 627 1.687493 CTTCCCCTCTTCCCGAGCT 60.687 63.158 0.00 0.00 38.49 4.09
627 628 2.736826 CCTTCCCCTCTTCCCGAGC 61.737 68.421 0.00 0.00 38.49 5.03
628 629 2.066999 CCCTTCCCCTCTTCCCGAG 61.067 68.421 0.00 0.00 39.57 4.63
629 630 1.898190 ATCCCTTCCCCTCTTCCCGA 61.898 60.000 0.00 0.00 0.00 5.14
630 631 1.384643 ATCCCTTCCCCTCTTCCCG 60.385 63.158 0.00 0.00 0.00 5.14
631 632 1.356494 CCATCCCTTCCCCTCTTCCC 61.356 65.000 0.00 0.00 0.00 3.97
632 633 1.356494 CCCATCCCTTCCCCTCTTCC 61.356 65.000 0.00 0.00 0.00 3.46
633 634 1.356494 CCCCATCCCTTCCCCTCTTC 61.356 65.000 0.00 0.00 0.00 2.87
634 635 1.309102 CCCCATCCCTTCCCCTCTT 60.309 63.158 0.00 0.00 0.00 2.85
635 636 1.848835 TTCCCCATCCCTTCCCCTCT 61.849 60.000 0.00 0.00 0.00 3.69
636 637 1.308746 TTCCCCATCCCTTCCCCTC 60.309 63.158 0.00 0.00 0.00 4.30
637 638 1.309102 CTTCCCCATCCCTTCCCCT 60.309 63.158 0.00 0.00 0.00 4.79
638 639 2.395353 CCTTCCCCATCCCTTCCCC 61.395 68.421 0.00 0.00 0.00 4.81
639 640 2.395353 CCCTTCCCCATCCCTTCCC 61.395 68.421 0.00 0.00 0.00 3.97
640 641 2.395353 CCCCTTCCCCATCCCTTCC 61.395 68.421 0.00 0.00 0.00 3.46
641 642 1.622752 ACCCCTTCCCCATCCCTTC 60.623 63.158 0.00 0.00 0.00 3.46
642 643 1.935931 CACCCCTTCCCCATCCCTT 60.936 63.158 0.00 0.00 0.00 3.95
643 644 2.287194 CACCCCTTCCCCATCCCT 60.287 66.667 0.00 0.00 0.00 4.20
644 645 3.429580 CCACCCCTTCCCCATCCC 61.430 72.222 0.00 0.00 0.00 3.85
645 646 3.429580 CCCACCCCTTCCCCATCC 61.430 72.222 0.00 0.00 0.00 3.51
646 647 3.429580 CCCCACCCCTTCCCCATC 61.430 72.222 0.00 0.00 0.00 3.51
647 648 3.980600 TCCCCACCCCTTCCCCAT 61.981 66.667 0.00 0.00 0.00 4.00
648 649 4.693915 CTCCCCACCCCTTCCCCA 62.694 72.222 0.00 0.00 0.00 4.96
650 651 4.364686 TCCTCCCCACCCCTTCCC 62.365 72.222 0.00 0.00 0.00 3.97
651 652 2.692741 CTCCTCCCCACCCCTTCC 60.693 72.222 0.00 0.00 0.00 3.46
652 653 2.692741 CCTCCTCCCCACCCCTTC 60.693 72.222 0.00 0.00 0.00 3.46
653 654 4.371231 CCCTCCTCCCCACCCCTT 62.371 72.222 0.00 0.00 0.00 3.95
660 661 4.760220 TTCTGCCCCCTCCTCCCC 62.760 72.222 0.00 0.00 0.00 4.81
661 662 3.093172 CTTCTGCCCCCTCCTCCC 61.093 72.222 0.00 0.00 0.00 4.30
662 663 1.616628 TTCTTCTGCCCCCTCCTCC 60.617 63.158 0.00 0.00 0.00 4.30
663 664 0.618968 TCTTCTTCTGCCCCCTCCTC 60.619 60.000 0.00 0.00 0.00 3.71
664 665 0.178861 TTCTTCTTCTGCCCCCTCCT 60.179 55.000 0.00 0.00 0.00 3.69
665 666 0.254462 CTTCTTCTTCTGCCCCCTCC 59.746 60.000 0.00 0.00 0.00 4.30
666 667 1.209261 CTCTTCTTCTTCTGCCCCCTC 59.791 57.143 0.00 0.00 0.00 4.30
667 668 1.284313 CTCTTCTTCTTCTGCCCCCT 58.716 55.000 0.00 0.00 0.00 4.79
668 669 0.254462 CCTCTTCTTCTTCTGCCCCC 59.746 60.000 0.00 0.00 0.00 5.40
669 670 0.254462 CCCTCTTCTTCTTCTGCCCC 59.746 60.000 0.00 0.00 0.00 5.80
670 671 0.393673 GCCCTCTTCTTCTTCTGCCC 60.394 60.000 0.00 0.00 0.00 5.36
671 672 0.742635 CGCCCTCTTCTTCTTCTGCC 60.743 60.000 0.00 0.00 0.00 4.85
672 673 0.247736 TCGCCCTCTTCTTCTTCTGC 59.752 55.000 0.00 0.00 0.00 4.26
673 674 1.734047 CGTCGCCCTCTTCTTCTTCTG 60.734 57.143 0.00 0.00 0.00 3.02
674 675 0.528470 CGTCGCCCTCTTCTTCTTCT 59.472 55.000 0.00 0.00 0.00 2.85
675 676 1.079317 GCGTCGCCCTCTTCTTCTTC 61.079 60.000 5.75 0.00 0.00 2.87
676 677 1.079750 GCGTCGCCCTCTTCTTCTT 60.080 57.895 5.75 0.00 0.00 2.52
677 678 2.574399 GCGTCGCCCTCTTCTTCT 59.426 61.111 5.75 0.00 0.00 2.85
678 679 2.881352 CGCGTCGCCCTCTTCTTC 60.881 66.667 12.44 0.00 0.00 2.87
692 693 2.876645 GTCTCCTTCACGAGCGCG 60.877 66.667 8.75 8.75 44.79 6.86
693 694 2.876645 CGTCTCCTTCACGAGCGC 60.877 66.667 0.00 0.00 39.75 5.92
694 695 2.876645 GCGTCTCCTTCACGAGCG 60.877 66.667 0.00 0.00 39.75 5.03
695 696 2.876645 CGCGTCTCCTTCACGAGC 60.877 66.667 0.00 0.00 39.75 5.03
696 697 1.226156 CTCGCGTCTCCTTCACGAG 60.226 63.158 5.77 0.00 43.46 4.18
697 698 2.687805 CCTCGCGTCTCCTTCACGA 61.688 63.158 5.77 0.00 39.75 4.35
698 699 2.196382 TTCCTCGCGTCTCCTTCACG 62.196 60.000 5.77 0.00 40.35 4.35
699 700 0.456995 CTTCCTCGCGTCTCCTTCAC 60.457 60.000 5.77 0.00 0.00 3.18
700 701 0.608308 TCTTCCTCGCGTCTCCTTCA 60.608 55.000 5.77 0.00 0.00 3.02
701 702 0.099791 CTCTTCCTCGCGTCTCCTTC 59.900 60.000 5.77 0.00 0.00 3.46
702 703 1.316706 CCTCTTCCTCGCGTCTCCTT 61.317 60.000 5.77 0.00 0.00 3.36
703 704 1.751162 CCTCTTCCTCGCGTCTCCT 60.751 63.158 5.77 0.00 0.00 3.69
704 705 2.776913 CCCTCTTCCTCGCGTCTCC 61.777 68.421 5.77 0.00 0.00 3.71
705 706 1.720694 CTCCCTCTTCCTCGCGTCTC 61.721 65.000 5.77 0.00 0.00 3.36
706 707 1.751162 CTCCCTCTTCCTCGCGTCT 60.751 63.158 5.77 0.00 0.00 4.18
707 708 1.749638 TCTCCCTCTTCCTCGCGTC 60.750 63.158 5.77 0.00 0.00 5.19
708 709 2.047443 GTCTCCCTCTTCCTCGCGT 61.047 63.158 5.77 0.00 0.00 6.01
709 710 2.776913 GGTCTCCCTCTTCCTCGCG 61.777 68.421 0.00 0.00 0.00 5.87
710 711 2.776913 CGGTCTCCCTCTTCCTCGC 61.777 68.421 0.00 0.00 0.00 5.03
711 712 2.122167 CCGGTCTCCCTCTTCCTCG 61.122 68.421 0.00 0.00 0.00 4.63
712 713 2.428085 GCCGGTCTCCCTCTTCCTC 61.428 68.421 1.90 0.00 0.00 3.71
713 714 2.364448 GCCGGTCTCCCTCTTCCT 60.364 66.667 1.90 0.00 0.00 3.36
714 715 3.471806 GGCCGGTCTCCCTCTTCC 61.472 72.222 1.90 0.00 0.00 3.46
715 716 3.471806 GGGCCGGTCTCCCTCTTC 61.472 72.222 5.77 0.00 40.66 2.87
716 717 3.864983 TTGGGCCGGTCTCCCTCTT 62.865 63.158 15.79 0.00 44.23 2.85
717 718 3.642741 ATTGGGCCGGTCTCCCTCT 62.643 63.158 15.79 1.69 44.23 3.69
718 719 3.090532 ATTGGGCCGGTCTCCCTC 61.091 66.667 15.79 0.00 44.23 4.30
719 720 3.411517 CATTGGGCCGGTCTCCCT 61.412 66.667 15.79 0.00 44.23 4.20
720 721 2.781431 AAACATTGGGCCGGTCTCCC 62.781 60.000 5.77 7.46 44.17 4.30
721 722 1.304134 AAACATTGGGCCGGTCTCC 60.304 57.895 5.77 4.72 0.00 3.71
722 723 1.313091 GGAAACATTGGGCCGGTCTC 61.313 60.000 5.77 0.00 0.00 3.36
723 724 1.304134 GGAAACATTGGGCCGGTCT 60.304 57.895 5.77 0.00 0.00 3.85
724 725 2.696759 CGGAAACATTGGGCCGGTC 61.697 63.158 1.90 0.00 40.08 4.79
725 726 2.675075 CGGAAACATTGGGCCGGT 60.675 61.111 1.90 0.00 40.08 5.28
726 727 4.128388 GCGGAAACATTGGGCCGG 62.128 66.667 0.00 0.00 43.73 6.13
727 728 4.128388 GGCGGAAACATTGGGCCG 62.128 66.667 0.00 0.00 46.14 6.13
728 729 4.128388 CGGCGGAAACATTGGGCC 62.128 66.667 0.00 0.00 40.36 5.80
729 730 4.128388 CCGGCGGAAACATTGGGC 62.128 66.667 24.41 0.00 0.00 5.36
730 731 2.675075 ACCGGCGGAAACATTGGG 60.675 61.111 35.78 1.17 0.00 4.12
731 732 2.566010 CACCGGCGGAAACATTGG 59.434 61.111 35.78 2.05 0.00 3.16
732 733 2.126502 GCACCGGCGGAAACATTG 60.127 61.111 35.78 20.36 0.00 2.82
733 734 3.370231 GGCACCGGCGGAAACATT 61.370 61.111 35.78 5.60 42.47 2.71
749 750 3.215597 GAAAACGTTTGGGGCCGGG 62.216 63.158 15.46 0.00 0.00 5.73
750 751 2.337170 GAAAACGTTTGGGGCCGG 59.663 61.111 15.46 0.00 0.00 6.13
751 752 1.740332 AAGGAAAACGTTTGGGGCCG 61.740 55.000 15.46 0.00 0.00 6.13
752 753 0.466543 AAAGGAAAACGTTTGGGGCC 59.533 50.000 15.46 13.36 0.00 5.80
753 754 3.386486 CTTAAAGGAAAACGTTTGGGGC 58.614 45.455 15.46 4.72 0.00 5.80
754 755 3.637694 TCCTTAAAGGAAAACGTTTGGGG 59.362 43.478 15.46 8.10 42.51 4.96
755 756 4.922471 TCCTTAAAGGAAAACGTTTGGG 57.078 40.909 15.46 7.14 42.51 4.12
766 767 8.208224 GGTTTGGAAGAAAATTTCCTTAAAGGA 58.792 33.333 1.57 0.00 45.59 3.36
767 768 7.170828 CGGTTTGGAAGAAAATTTCCTTAAAGG 59.829 37.037 1.57 0.00 45.59 3.11
768 769 7.307160 GCGGTTTGGAAGAAAATTTCCTTAAAG 60.307 37.037 1.57 0.00 45.59 1.85
798 799 3.843117 GAATAGCGCTCCCGTCGGG 62.843 68.421 25.31 25.31 46.11 5.14
945 1005 1.468985 GCAGGTGCTGTCTCTCTCTA 58.531 55.000 0.00 0.00 38.21 2.43
1083 1163 4.379243 CGGTTCTCCCTGCGCTGT 62.379 66.667 9.73 0.00 0.00 4.40
1104 1184 0.456995 GCGACTCCTTCTTCTCCACG 60.457 60.000 0.00 0.00 0.00 4.94
1158 1238 4.388499 TCGGCGGCCTTCTTCCAC 62.388 66.667 18.34 0.00 0.00 4.02
1437 1957 1.228124 CCACCAGAAACGCTTCCCA 60.228 57.895 0.00 0.00 31.28 4.37
1446 1966 2.528127 TCCGCCTCCCACCAGAAA 60.528 61.111 0.00 0.00 0.00 2.52
1701 2310 7.915293 ATTGTACTCGTGAACAATAATCCAA 57.085 32.000 9.25 0.00 42.87 3.53
1728 2339 7.739498 TGGTAATCTTGAAACCAGTAACTTC 57.261 36.000 4.68 0.00 38.36 3.01
1750 2362 3.618351 ACTGCTCATGAGAGGAAAATGG 58.382 45.455 27.04 6.78 41.98 3.16
1751 2363 3.626670 GGACTGCTCATGAGAGGAAAATG 59.373 47.826 27.04 8.21 41.98 2.32
1758 2375 0.535797 TGCTGGACTGCTCATGAGAG 59.464 55.000 27.04 20.52 44.96 3.20
1896 2544 2.537401 GTTCCGGATTGTCCTACTTCG 58.463 52.381 4.15 0.00 33.30 3.79
1903 2551 5.374071 ACTTATATTGGTTCCGGATTGTCC 58.626 41.667 4.15 6.77 0.00 4.02
1920 2568 6.403200 GCAGCATGTTCGAAAGGAAACTTATA 60.403 38.462 0.00 0.00 45.80 0.98
1949 2597 2.618053 CTCGTCTTGCCCTTTACGAAT 58.382 47.619 0.00 0.00 43.06 3.34
1967 2615 1.401552 TGGATATTTGCGTTGCTGCTC 59.598 47.619 0.00 0.00 35.36 4.26
2028 2676 3.730715 CAGCAACATGTTCGAAAGGAAAC 59.269 43.478 8.48 0.00 36.14 2.78
2029 2677 3.795150 GCAGCAACATGTTCGAAAGGAAA 60.795 43.478 8.48 0.00 36.14 3.13
2030 2678 2.287547 GCAGCAACATGTTCGAAAGGAA 60.288 45.455 8.48 0.00 0.00 3.36
2031 2679 1.266718 GCAGCAACATGTTCGAAAGGA 59.733 47.619 8.48 0.00 0.00 3.36
2032 2680 1.267806 AGCAGCAACATGTTCGAAAGG 59.732 47.619 8.48 0.00 0.00 3.11
2033 2681 2.031769 TCAGCAGCAACATGTTCGAAAG 60.032 45.455 8.48 0.00 0.00 2.62
2034 2682 1.946081 TCAGCAGCAACATGTTCGAAA 59.054 42.857 8.48 0.00 0.00 3.46
2049 2697 2.636647 TGTCAAGTGGTTCATCAGCA 57.363 45.000 0.00 0.00 0.00 4.41
2050 2698 3.064545 GCTATGTCAAGTGGTTCATCAGC 59.935 47.826 0.00 0.00 0.00 4.26
2053 2701 4.507710 TCAGCTATGTCAAGTGGTTCATC 58.492 43.478 0.00 0.00 0.00 2.92
2054 2702 4.019860 ACTCAGCTATGTCAAGTGGTTCAT 60.020 41.667 0.00 0.00 0.00 2.57
2083 2775 6.475504 TCAGAAGATTTAGACTTGGCATTGA 58.524 36.000 0.00 0.00 0.00 2.57
2090 2782 6.373774 AGGTGCAATCAGAAGATTTAGACTTG 59.626 38.462 0.00 0.00 42.46 3.16
2119 2873 5.471556 TGACTACCTATCAACGTCCAAAA 57.528 39.130 0.00 0.00 0.00 2.44
2135 2977 5.175856 GCACAATCGGTTATCTCATGACTAC 59.824 44.000 0.00 0.00 0.00 2.73
2147 2989 1.155889 CTGCAGTGCACAATCGGTTA 58.844 50.000 21.04 0.00 33.79 2.85
2151 2993 0.165295 CACTCTGCAGTGCACAATCG 59.835 55.000 21.04 4.10 43.77 3.34
2198 3051 4.281688 AGTTAACTGAATGCATGCCAGTTT 59.718 37.500 33.59 22.18 45.59 2.66
2220 3073 5.431765 AGGGAGTATGATGTTACTTGCAAG 58.568 41.667 24.84 24.84 32.59 4.01
2231 3084 2.320781 AGGAACGGAGGGAGTATGATG 58.679 52.381 0.00 0.00 0.00 3.07
2234 3087 4.957684 ATTTAGGAACGGAGGGAGTATG 57.042 45.455 0.00 0.00 0.00 2.39
2245 3098 2.692041 ACGGAGGGAGTATTTAGGAACG 59.308 50.000 0.00 0.00 0.00 3.95
2248 3101 2.750807 CGGACGGAGGGAGTATTTAGGA 60.751 54.545 0.00 0.00 0.00 2.94
2251 3104 1.215173 TCCGGACGGAGGGAGTATTTA 59.785 52.381 9.76 0.00 39.76 1.40
2252 3105 0.032813 TCCGGACGGAGGGAGTATTT 60.033 55.000 9.76 0.00 39.76 1.40
2257 3110 0.388294 GTAATTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2258 3111 0.032813 AGTAATTCCGGACGGAGGGA 60.033 55.000 13.64 0.00 46.06 4.20
2259 3112 0.828677 AAGTAATTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2260 3113 1.206371 ACAAGTAATTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2261 3114 2.537401 GACAAGTAATTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
2262 3115 1.135315 CGACAAGTAATTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
2263 3116 1.274596 CGACAAGTAATTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
2264 3117 0.643820 GCGACAAGTAATTCCGGACG 59.356 55.000 1.83 1.53 0.00 4.79
2265 3118 1.004595 GGCGACAAGTAATTCCGGAC 58.995 55.000 1.83 0.00 0.00 4.79
2267 3120 0.458889 TCGGCGACAAGTAATTCCGG 60.459 55.000 4.99 0.00 37.65 5.14
2268 3121 1.352114 TTCGGCGACAAGTAATTCCG 58.648 50.000 10.16 0.00 38.34 4.30
2270 3123 3.372822 TCCATTTCGGCGACAAGTAATTC 59.627 43.478 10.16 0.00 33.14 2.17
2273 3126 2.459060 TCCATTTCGGCGACAAGTAA 57.541 45.000 10.16 0.01 33.14 2.24
2274 3127 2.684001 ATCCATTTCGGCGACAAGTA 57.316 45.000 10.16 0.00 33.14 2.24
2275 3128 2.684001 TATCCATTTCGGCGACAAGT 57.316 45.000 10.16 0.00 33.14 3.16
2276 3129 4.349663 TTTTATCCATTTCGGCGACAAG 57.650 40.909 10.16 0.00 33.14 3.16
2277 3130 4.768130 TTTTTATCCATTTCGGCGACAA 57.232 36.364 10.16 8.07 33.14 3.18
2278 3131 4.439426 CCATTTTTATCCATTTCGGCGACA 60.439 41.667 10.16 2.52 33.14 4.35
2279 3132 4.041723 CCATTTTTATCCATTTCGGCGAC 58.958 43.478 10.16 0.00 33.14 5.19
2280 3133 3.948473 TCCATTTTTATCCATTTCGGCGA 59.052 39.130 4.99 4.99 33.14 5.54
2281 3134 4.300189 TCCATTTTTATCCATTTCGGCG 57.700 40.909 0.00 0.00 33.14 6.46
2282 3135 5.600696 ACATCCATTTTTATCCATTTCGGC 58.399 37.500 0.00 0.00 33.14 5.54
2283 3136 8.796475 AGATACATCCATTTTTATCCATTTCGG 58.204 33.333 0.00 0.00 0.00 4.30
2321 3174 9.553064 GTCAAAGAAATGGATGTATCTAGACAT 57.447 33.333 0.00 0.00 42.82 3.06
2322 3175 8.539544 TGTCAAAGAAATGGATGTATCTAGACA 58.460 33.333 0.00 0.00 36.03 3.41
2323 3176 8.948631 TGTCAAAGAAATGGATGTATCTAGAC 57.051 34.615 0.00 0.00 32.32 2.59
2324 3177 9.605275 CTTGTCAAAGAAATGGATGTATCTAGA 57.395 33.333 0.00 0.00 35.19 2.43
2325 3178 9.388506 ACTTGTCAAAGAAATGGATGTATCTAG 57.611 33.333 0.00 0.00 36.84 2.43
2327 3180 9.911788 ATACTTGTCAAAGAAATGGATGTATCT 57.088 29.630 0.00 0.00 36.84 1.98
2331 3184 9.696917 GAAAATACTTGTCAAAGAAATGGATGT 57.303 29.630 0.00 0.00 36.84 3.06
2332 3185 8.853345 CGAAAATACTTGTCAAAGAAATGGATG 58.147 33.333 0.00 0.00 36.84 3.51
2333 3186 8.028938 CCGAAAATACTTGTCAAAGAAATGGAT 58.971 33.333 0.00 0.00 36.84 3.41
2334 3187 7.229707 TCCGAAAATACTTGTCAAAGAAATGGA 59.770 33.333 0.00 0.00 36.84 3.41
2335 3188 7.326063 GTCCGAAAATACTTGTCAAAGAAATGG 59.674 37.037 0.00 0.00 36.84 3.16
2336 3189 7.059488 CGTCCGAAAATACTTGTCAAAGAAATG 59.941 37.037 0.00 0.00 36.84 2.32
2337 3190 7.075741 CGTCCGAAAATACTTGTCAAAGAAAT 58.924 34.615 0.00 0.00 36.84 2.17
2338 3191 6.423862 CGTCCGAAAATACTTGTCAAAGAAA 58.576 36.000 0.00 0.00 36.84 2.52
2339 3192 5.049954 CCGTCCGAAAATACTTGTCAAAGAA 60.050 40.000 0.00 0.00 36.84 2.52
2340 3193 4.449743 CCGTCCGAAAATACTTGTCAAAGA 59.550 41.667 0.00 0.00 36.84 2.52
2341 3194 4.449743 TCCGTCCGAAAATACTTGTCAAAG 59.550 41.667 0.00 0.00 39.49 2.77
2342 3195 4.378774 TCCGTCCGAAAATACTTGTCAAA 58.621 39.130 0.00 0.00 0.00 2.69
2343 3196 3.991773 CTCCGTCCGAAAATACTTGTCAA 59.008 43.478 0.00 0.00 0.00 3.18
2344 3197 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2345 3198 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2346 3199 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2347 3200 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2348 3201 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2349 3202 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2350 3203 1.805495 GCTCCCTCCGTCCGAAAATAC 60.805 57.143 0.00 0.00 0.00 1.89
2351 3204 0.462789 GCTCCCTCCGTCCGAAAATA 59.537 55.000 0.00 0.00 0.00 1.40
2352 3205 1.221021 GCTCCCTCCGTCCGAAAAT 59.779 57.895 0.00 0.00 0.00 1.82
2353 3206 2.211410 TGCTCCCTCCGTCCGAAAA 61.211 57.895 0.00 0.00 0.00 2.29
2354 3207 2.602267 TGCTCCCTCCGTCCGAAA 60.602 61.111 0.00 0.00 0.00 3.46
2355 3208 3.379445 GTGCTCCCTCCGTCCGAA 61.379 66.667 0.00 0.00 0.00 4.30
2356 3209 4.671590 TGTGCTCCCTCCGTCCGA 62.672 66.667 0.00 0.00 0.00 4.55
2357 3210 3.649277 CTTGTGCTCCCTCCGTCCG 62.649 68.421 0.00 0.00 0.00 4.79
2358 3211 2.266055 CTTGTGCTCCCTCCGTCC 59.734 66.667 0.00 0.00 0.00 4.79
2359 3212 1.079750 GACTTGTGCTCCCTCCGTC 60.080 63.158 0.00 0.00 0.00 4.79
2360 3213 1.122019 AAGACTTGTGCTCCCTCCGT 61.122 55.000 0.00 0.00 0.00 4.69
2361 3214 0.035458 AAAGACTTGTGCTCCCTCCG 59.965 55.000 0.00 0.00 0.00 4.63
2362 3215 1.349357 AGAAAGACTTGTGCTCCCTCC 59.651 52.381 0.00 0.00 0.00 4.30
2363 3216 2.849294 AGAAAGACTTGTGCTCCCTC 57.151 50.000 0.00 0.00 0.00 4.30
2364 3217 3.511477 TCTAGAAAGACTTGTGCTCCCT 58.489 45.455 0.00 0.00 0.00 4.20
2365 3218 3.511934 TCTCTAGAAAGACTTGTGCTCCC 59.488 47.826 0.00 0.00 0.00 4.30
2366 3219 4.792521 TCTCTAGAAAGACTTGTGCTCC 57.207 45.455 0.00 0.00 0.00 4.70
2367 3220 5.810074 GGAATCTCTAGAAAGACTTGTGCTC 59.190 44.000 0.00 0.00 0.00 4.26
2368 3221 5.247110 TGGAATCTCTAGAAAGACTTGTGCT 59.753 40.000 0.00 0.00 0.00 4.40
2369 3222 5.482908 TGGAATCTCTAGAAAGACTTGTGC 58.517 41.667 0.00 0.00 0.00 4.57
2370 3223 6.931281 TGTTGGAATCTCTAGAAAGACTTGTG 59.069 38.462 0.00 0.00 0.00 3.33
2371 3224 7.067496 TGTTGGAATCTCTAGAAAGACTTGT 57.933 36.000 0.00 0.00 0.00 3.16
2372 3225 7.659390 ACTTGTTGGAATCTCTAGAAAGACTTG 59.341 37.037 0.00 0.00 0.00 3.16
2373 3226 7.740805 ACTTGTTGGAATCTCTAGAAAGACTT 58.259 34.615 0.00 0.00 0.00 3.01
2374 3227 7.309770 ACTTGTTGGAATCTCTAGAAAGACT 57.690 36.000 0.00 0.00 0.00 3.24
2380 3233 9.011095 CCGTATATACTTGTTGGAATCTCTAGA 57.989 37.037 11.05 0.00 0.00 2.43
2381 3234 9.011095 TCCGTATATACTTGTTGGAATCTCTAG 57.989 37.037 11.05 0.00 0.00 2.43
2382 3235 8.929260 TCCGTATATACTTGTTGGAATCTCTA 57.071 34.615 11.05 0.00 0.00 2.43
2383 3236 7.524038 GCTCCGTATATACTTGTTGGAATCTCT 60.524 40.741 11.05 0.00 0.00 3.10
2384 3237 6.586844 GCTCCGTATATACTTGTTGGAATCTC 59.413 42.308 11.05 0.00 0.00 2.75
2385 3238 6.041637 TGCTCCGTATATACTTGTTGGAATCT 59.958 38.462 11.05 0.00 0.00 2.40
2386 3239 6.220930 TGCTCCGTATATACTTGTTGGAATC 58.779 40.000 11.05 5.44 0.00 2.52
2387 3240 6.169557 TGCTCCGTATATACTTGTTGGAAT 57.830 37.500 11.05 0.00 0.00 3.01
2388 3241 5.601583 TGCTCCGTATATACTTGTTGGAA 57.398 39.130 11.05 0.00 0.00 3.53
2389 3242 5.601583 TTGCTCCGTATATACTTGTTGGA 57.398 39.130 11.05 8.43 0.00 3.53
2390 3243 6.671614 TTTTGCTCCGTATATACTTGTTGG 57.328 37.500 11.05 4.61 0.00 3.77
2391 3244 7.915508 TCATTTTGCTCCGTATATACTTGTTG 58.084 34.615 11.05 0.00 0.00 3.33
2392 3245 7.769044 ACTCATTTTGCTCCGTATATACTTGTT 59.231 33.333 11.05 0.00 0.00 2.83
2393 3246 7.272978 ACTCATTTTGCTCCGTATATACTTGT 58.727 34.615 11.05 0.00 0.00 3.16
2394 3247 7.715265 ACTCATTTTGCTCCGTATATACTTG 57.285 36.000 11.05 2.61 0.00 3.16
2395 3248 9.826574 TTTACTCATTTTGCTCCGTATATACTT 57.173 29.630 11.05 0.00 0.00 2.24
2396 3249 9.998106 ATTTACTCATTTTGCTCCGTATATACT 57.002 29.630 11.05 0.00 0.00 2.12
2400 3253 9.472361 GTAGATTTACTCATTTTGCTCCGTATA 57.528 33.333 0.00 0.00 0.00 1.47
2401 3254 7.985184 TGTAGATTTACTCATTTTGCTCCGTAT 59.015 33.333 0.00 0.00 0.00 3.06
2402 3255 7.277098 GTGTAGATTTACTCATTTTGCTCCGTA 59.723 37.037 0.00 0.00 0.00 4.02
2403 3256 6.092259 GTGTAGATTTACTCATTTTGCTCCGT 59.908 38.462 0.00 0.00 0.00 4.69
2404 3257 6.313905 AGTGTAGATTTACTCATTTTGCTCCG 59.686 38.462 0.00 0.00 0.00 4.63
2405 3258 7.550906 AGAGTGTAGATTTACTCATTTTGCTCC 59.449 37.037 7.09 0.00 44.41 4.70
2406 3259 8.485976 AGAGTGTAGATTTACTCATTTTGCTC 57.514 34.615 7.09 0.00 44.41 4.26
2407 3260 9.944376 TTAGAGTGTAGATTTACTCATTTTGCT 57.056 29.630 7.09 0.00 44.41 3.91
2425 3278 9.587772 GATGTATGTAGACATGTTTTAGAGTGT 57.412 33.333 0.00 0.00 40.18 3.55
2426 3279 9.809096 AGATGTATGTAGACATGTTTTAGAGTG 57.191 33.333 0.00 0.00 40.18 3.51
2427 3280 9.809096 CAGATGTATGTAGACATGTTTTAGAGT 57.191 33.333 0.00 0.00 40.18 3.24
2428 3281 9.809096 ACAGATGTATGTAGACATGTTTTAGAG 57.191 33.333 0.00 0.00 40.18 2.43
2445 3298 9.330063 CAAATGGACTACAACATACAGATGTAT 57.670 33.333 0.00 0.00 45.93 2.29
2446 3299 8.536175 TCAAATGGACTACAACATACAGATGTA 58.464 33.333 0.00 0.00 45.93 2.29
2448 3301 7.848223 TCAAATGGACTACAACATACAGATG 57.152 36.000 0.00 0.00 39.16 2.90
2449 3302 8.862325 TTTCAAATGGACTACAACATACAGAT 57.138 30.769 0.00 0.00 0.00 2.90
2450 3303 8.729756 CATTTCAAATGGACTACAACATACAGA 58.270 33.333 1.73 0.00 0.00 3.41
2451 3304 8.514594 ACATTTCAAATGGACTACAACATACAG 58.485 33.333 14.70 0.00 0.00 2.74
2452 3305 8.402798 ACATTTCAAATGGACTACAACATACA 57.597 30.769 14.70 0.00 0.00 2.29
2453 3306 8.730680 AGACATTTCAAATGGACTACAACATAC 58.269 33.333 14.70 0.00 0.00 2.39
2454 3307 8.862325 AGACATTTCAAATGGACTACAACATA 57.138 30.769 14.70 0.00 0.00 2.29
2455 3308 7.765695 AGACATTTCAAATGGACTACAACAT 57.234 32.000 14.70 0.00 0.00 2.71
2456 3309 8.684386 TTAGACATTTCAAATGGACTACAACA 57.316 30.769 14.70 1.25 0.00 3.33
2457 3310 9.959749 TTTTAGACATTTCAAATGGACTACAAC 57.040 29.630 14.70 0.00 0.00 3.32
2462 3315 9.136323 AGTCTTTTTAGACATTTCAAATGGACT 57.864 29.630 14.70 14.18 41.02 3.85
2481 3334 7.991460 CCCTCCGTTCCTAAATATTAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
2489 3342 5.901276 TGTACTCCCTCCGTTCCTAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
2495 3348 2.242965 TCATGTACTCCCTCCGTTCCTA 59.757 50.000 0.00 0.00 0.00 2.94
2499 3352 2.233305 ACTCATGTACTCCCTCCGTT 57.767 50.000 0.00 0.00 0.00 4.44
2502 3355 3.388024 TGCATTACTCATGTACTCCCTCC 59.612 47.826 0.00 0.00 34.98 4.30
2537 3498 5.577835 TCACTTGATTTGTTTTGGAGTTCG 58.422 37.500 0.00 0.00 0.00 3.95
2538 3499 7.545615 AGTTTCACTTGATTTGTTTTGGAGTTC 59.454 33.333 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.