Multiple sequence alignment - TraesCS7D01G336100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G336100 | chr7D | 100.000 | 6183 | 0 | 0 | 1 | 6183 | 428028741 | 428022559 | 0.000000e+00 | 11418 |
1 | TraesCS7D01G336100 | chr7D | 80.889 | 225 | 33 | 6 | 3939 | 4155 | 99616071 | 99616293 | 1.070000e-37 | 169 |
2 | TraesCS7D01G336100 | chr7B | 92.701 | 5576 | 232 | 69 | 16 | 5503 | 445667264 | 445661776 | 0.000000e+00 | 7880 |
3 | TraesCS7D01G336100 | chr7B | 90.909 | 781 | 63 | 6 | 3158 | 3938 | 301759584 | 301758812 | 0.000000e+00 | 1042 |
4 | TraesCS7D01G336100 | chr7B | 85.502 | 269 | 23 | 12 | 5684 | 5938 | 445661555 | 445661289 | 3.670000e-67 | 267 |
5 | TraesCS7D01G336100 | chr7B | 93.865 | 163 | 7 | 2 | 5933 | 6095 | 445661253 | 445661094 | 6.190000e-60 | 243 |
6 | TraesCS7D01G336100 | chr7B | 90.683 | 161 | 14 | 1 | 2986 | 3145 | 445663149 | 445663309 | 4.860000e-51 | 213 |
7 | TraesCS7D01G336100 | chr7B | 92.800 | 125 | 8 | 1 | 5553 | 5676 | 445661759 | 445661635 | 4.920000e-41 | 180 |
8 | TraesCS7D01G336100 | chr6B | 88.227 | 1376 | 109 | 27 | 4165 | 5508 | 140846304 | 140847658 | 0.000000e+00 | 1594 |
9 | TraesCS7D01G336100 | chr6B | 91.784 | 779 | 49 | 9 | 3155 | 3931 | 475702157 | 475701392 | 0.000000e+00 | 1070 |
10 | TraesCS7D01G336100 | chr6B | 89.144 | 654 | 49 | 8 | 615 | 1256 | 140843674 | 140844317 | 0.000000e+00 | 795 |
11 | TraesCS7D01G336100 | chr6B | 85.872 | 545 | 46 | 20 | 1420 | 1937 | 140844324 | 140844864 | 9.060000e-153 | 551 |
12 | TraesCS7D01G336100 | chr6B | 87.037 | 486 | 43 | 14 | 1420 | 1889 | 219670428 | 219670909 | 1.180000e-146 | 531 |
13 | TraesCS7D01G336100 | chr6B | 81.974 | 233 | 31 | 5 | 3935 | 4156 | 17007099 | 17007331 | 2.940000e-43 | 187 |
14 | TraesCS7D01G336100 | chr6B | 86.364 | 176 | 19 | 5 | 2981 | 3154 | 17007317 | 17007145 | 2.940000e-43 | 187 |
15 | TraesCS7D01G336100 | chr6B | 82.447 | 188 | 23 | 2 | 3936 | 4113 | 21125867 | 21126054 | 8.300000e-34 | 156 |
16 | TraesCS7D01G336100 | chr6D | 88.006 | 1384 | 111 | 33 | 4157 | 5508 | 65755573 | 65756933 | 0.000000e+00 | 1585 |
17 | TraesCS7D01G336100 | chr6D | 92.497 | 773 | 48 | 5 | 3155 | 3926 | 296696023 | 296696786 | 0.000000e+00 | 1098 |
18 | TraesCS7D01G336100 | chr6D | 90.459 | 566 | 34 | 9 | 621 | 1174 | 65753174 | 65753731 | 0.000000e+00 | 728 |
19 | TraesCS7D01G336100 | chr6D | 86.148 | 527 | 60 | 9 | 1420 | 1937 | 65753788 | 65754310 | 1.950000e-154 | 556 |
20 | TraesCS7D01G336100 | chr6D | 80.342 | 468 | 49 | 24 | 2372 | 2813 | 65754762 | 65755212 | 1.290000e-81 | 315 |
21 | TraesCS7D01G336100 | chr6D | 87.059 | 170 | 21 | 1 | 2981 | 3150 | 283554002 | 283554170 | 2.270000e-44 | 191 |
22 | TraesCS7D01G336100 | chr6D | 83.439 | 157 | 21 | 3 | 3985 | 4136 | 394128187 | 394128343 | 2.320000e-29 | 141 |
23 | TraesCS7D01G336100 | chr6A | 88.565 | 1268 | 92 | 26 | 4157 | 5393 | 82106755 | 82105510 | 0.000000e+00 | 1489 |
24 | TraesCS7D01G336100 | chr6A | 86.917 | 665 | 54 | 11 | 625 | 1262 | 82109683 | 82109025 | 0.000000e+00 | 715 |
25 | TraesCS7D01G336100 | chr6A | 78.812 | 623 | 78 | 31 | 2372 | 2961 | 82107353 | 82106752 | 2.720000e-98 | 370 |
26 | TraesCS7D01G336100 | chr6A | 87.879 | 165 | 20 | 0 | 2981 | 3145 | 403322966 | 403323130 | 1.760000e-45 | 195 |
27 | TraesCS7D01G336100 | chr6A | 83.544 | 158 | 21 | 3 | 3985 | 4137 | 540273720 | 540273877 | 6.460000e-30 | 143 |
28 | TraesCS7D01G336100 | chr7A | 92.000 | 1075 | 60 | 17 | 4457 | 5508 | 504221545 | 504222616 | 0.000000e+00 | 1485 |
29 | TraesCS7D01G336100 | chr7A | 83.926 | 1294 | 114 | 45 | 787 | 2053 | 504218750 | 504219976 | 0.000000e+00 | 1151 |
30 | TraesCS7D01G336100 | chr7A | 92.497 | 773 | 49 | 5 | 3155 | 3923 | 496823079 | 496823846 | 0.000000e+00 | 1098 |
31 | TraesCS7D01G336100 | chr7A | 88.180 | 533 | 46 | 9 | 2243 | 2760 | 504220674 | 504221204 | 2.450000e-173 | 619 |
32 | TraesCS7D01G336100 | chr3A | 92.061 | 781 | 55 | 5 | 3155 | 3935 | 375017490 | 375018263 | 0.000000e+00 | 1092 |
33 | TraesCS7D01G336100 | chr3A | 86.735 | 196 | 21 | 5 | 2968 | 3163 | 26672082 | 26671892 | 4.860000e-51 | 213 |
34 | TraesCS7D01G336100 | chr5B | 92.021 | 777 | 48 | 8 | 3155 | 3931 | 290450936 | 290451698 | 0.000000e+00 | 1079 |
35 | TraesCS7D01G336100 | chr5B | 83.230 | 161 | 14 | 8 | 3981 | 4137 | 493520999 | 493521150 | 1.080000e-27 | 135 |
36 | TraesCS7D01G336100 | chr3D | 91.154 | 780 | 58 | 8 | 3158 | 3935 | 313293128 | 313292358 | 0.000000e+00 | 1048 |
37 | TraesCS7D01G336100 | chr1D | 91.083 | 785 | 53 | 8 | 3154 | 3929 | 225403218 | 225403994 | 0.000000e+00 | 1046 |
38 | TraesCS7D01G336100 | chr1D | 87.135 | 171 | 18 | 3 | 2985 | 3154 | 79314126 | 79314293 | 2.270000e-44 | 191 |
39 | TraesCS7D01G336100 | chr1D | 91.150 | 113 | 9 | 1 | 4043 | 4155 | 383155049 | 383154938 | 1.070000e-32 | 152 |
40 | TraesCS7D01G336100 | chr1A | 87.255 | 204 | 21 | 3 | 2965 | 3163 | 98227468 | 98227265 | 1.730000e-55 | 228 |
41 | TraesCS7D01G336100 | chr1B | 85.714 | 203 | 21 | 4 | 615 | 816 | 15712719 | 15712914 | 2.260000e-49 | 207 |
42 | TraesCS7D01G336100 | chr1B | 81.567 | 217 | 28 | 3 | 3948 | 4153 | 8014860 | 8015075 | 1.070000e-37 | 169 |
43 | TraesCS7D01G336100 | chr4A | 85.027 | 187 | 22 | 5 | 2975 | 3159 | 514415196 | 514415014 | 1.060000e-42 | 185 |
44 | TraesCS7D01G336100 | chr4A | 81.383 | 188 | 21 | 3 | 3936 | 4113 | 598265328 | 598265511 | 2.320000e-29 | 141 |
45 | TraesCS7D01G336100 | chr2D | 83.770 | 191 | 19 | 6 | 3978 | 4157 | 21657762 | 21657573 | 2.960000e-38 | 171 |
46 | TraesCS7D01G336100 | chr2D | 83.246 | 191 | 20 | 6 | 3978 | 4157 | 21674176 | 21673987 | 1.380000e-36 | 165 |
47 | TraesCS7D01G336100 | chrUn | 83.696 | 184 | 20 | 1 | 3940 | 4113 | 31787717 | 31787534 | 1.380000e-36 | 165 |
48 | TraesCS7D01G336100 | chr3B | 80.087 | 231 | 33 | 5 | 3936 | 4155 | 47194269 | 47194041 | 6.420000e-35 | 159 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G336100 | chr7D | 428022559 | 428028741 | 6182 | True | 11418.0 | 11418 | 100.000000 | 1 | 6183 | 1 | chr7D.!!$R1 | 6182 |
1 | TraesCS7D01G336100 | chr7B | 445661094 | 445667264 | 6170 | True | 2142.5 | 7880 | 91.217000 | 16 | 6095 | 4 | chr7B.!!$R2 | 6079 |
2 | TraesCS7D01G336100 | chr7B | 301758812 | 301759584 | 772 | True | 1042.0 | 1042 | 90.909000 | 3158 | 3938 | 1 | chr7B.!!$R1 | 780 |
3 | TraesCS7D01G336100 | chr6B | 475701392 | 475702157 | 765 | True | 1070.0 | 1070 | 91.784000 | 3155 | 3931 | 1 | chr6B.!!$R2 | 776 |
4 | TraesCS7D01G336100 | chr6B | 140843674 | 140847658 | 3984 | False | 980.0 | 1594 | 87.747667 | 615 | 5508 | 3 | chr6B.!!$F4 | 4893 |
5 | TraesCS7D01G336100 | chr6D | 296696023 | 296696786 | 763 | False | 1098.0 | 1098 | 92.497000 | 3155 | 3926 | 1 | chr6D.!!$F2 | 771 |
6 | TraesCS7D01G336100 | chr6D | 65753174 | 65756933 | 3759 | False | 796.0 | 1585 | 86.238750 | 621 | 5508 | 4 | chr6D.!!$F4 | 4887 |
7 | TraesCS7D01G336100 | chr6A | 82105510 | 82109683 | 4173 | True | 858.0 | 1489 | 84.764667 | 625 | 5393 | 3 | chr6A.!!$R1 | 4768 |
8 | TraesCS7D01G336100 | chr7A | 496823079 | 496823846 | 767 | False | 1098.0 | 1098 | 92.497000 | 3155 | 3923 | 1 | chr7A.!!$F1 | 768 |
9 | TraesCS7D01G336100 | chr7A | 504218750 | 504222616 | 3866 | False | 1085.0 | 1485 | 88.035333 | 787 | 5508 | 3 | chr7A.!!$F2 | 4721 |
10 | TraesCS7D01G336100 | chr3A | 375017490 | 375018263 | 773 | False | 1092.0 | 1092 | 92.061000 | 3155 | 3935 | 1 | chr3A.!!$F1 | 780 |
11 | TraesCS7D01G336100 | chr5B | 290450936 | 290451698 | 762 | False | 1079.0 | 1079 | 92.021000 | 3155 | 3931 | 1 | chr5B.!!$F1 | 776 |
12 | TraesCS7D01G336100 | chr3D | 313292358 | 313293128 | 770 | True | 1048.0 | 1048 | 91.154000 | 3158 | 3935 | 1 | chr3D.!!$R1 | 777 |
13 | TraesCS7D01G336100 | chr1D | 225403218 | 225403994 | 776 | False | 1046.0 | 1046 | 91.083000 | 3154 | 3929 | 1 | chr1D.!!$F2 | 775 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
36 | 37 | 0.603065 | GGTGCCATGAAACCTCCAAC | 59.397 | 55.000 | 8.97 | 0.0 | 33.40 | 3.77 | F |
871 | 897 | 2.127232 | GTTGTTGTGGCCTGCTGGT | 61.127 | 57.895 | 11.69 | 0.0 | 35.27 | 4.00 | F |
2656 | 3822 | 0.762842 | ACATGCGTAGGGGCCAGATA | 60.763 | 55.000 | 4.39 | 0.0 | 0.00 | 1.98 | F |
3232 | 4661 | 0.183014 | TACTAGGCACGAGGAGGAGG | 59.817 | 60.000 | 0.00 | 0.0 | 34.62 | 4.30 | F |
3663 | 5100 | 0.625316 | TGGGCATATTCAGTGCAGGT | 59.375 | 50.000 | 0.00 | 0.0 | 44.25 | 4.00 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1179 | 1231 | 0.606604 | ACGACCGGCTACACAGAAAT | 59.393 | 50.000 | 0.0 | 0.0 | 0.00 | 2.17 | R |
2684 | 3850 | 0.033642 | TGATTTGCCCGTGTCGTACA | 59.966 | 50.000 | 0.0 | 0.0 | 0.00 | 2.90 | R |
3503 | 4939 | 0.392461 | GCATCTCCGCCACACCTAAA | 60.392 | 55.000 | 0.0 | 0.0 | 0.00 | 1.85 | R |
4095 | 5561 | 1.944024 | CTACACCCACGCAAGAAAACA | 59.056 | 47.619 | 0.0 | 0.0 | 43.62 | 2.83 | R |
5540 | 7244 | 1.058284 | AGGCCCGTACCTTACAAACA | 58.942 | 50.000 | 0.0 | 0.0 | 36.28 | 2.83 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
34 | 35 | 1.076549 | GGGTGCCATGAAACCTCCA | 59.923 | 57.895 | 14.25 | 0.00 | 36.64 | 3.86 |
36 | 37 | 0.603065 | GGTGCCATGAAACCTCCAAC | 59.397 | 55.000 | 8.97 | 0.00 | 33.40 | 3.77 |
41 | 42 | 3.390639 | TGCCATGAAACCTCCAACAAAAT | 59.609 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
83 | 85 | 6.381498 | TGTACCTCAAATCCAACTATCCAA | 57.619 | 37.500 | 0.00 | 0.00 | 0.00 | 3.53 |
86 | 88 | 5.203528 | ACCTCAAATCCAACTATCCAATGG | 58.796 | 41.667 | 0.00 | 0.00 | 35.49 | 3.16 |
194 | 196 | 9.599866 | TTTTATCAGAATTAGACACATCGACAT | 57.400 | 29.630 | 0.00 | 0.00 | 0.00 | 3.06 |
197 | 199 | 4.567959 | CAGAATTAGACACATCGACATGCA | 59.432 | 41.667 | 0.00 | 0.00 | 32.57 | 3.96 |
224 | 226 | 9.634021 | TGCCACATGGTTAAACAATCTATATTA | 57.366 | 29.630 | 0.00 | 0.00 | 37.57 | 0.98 |
233 | 235 | 6.861065 | AAACAATCTATATTAGCCACGTGG | 57.139 | 37.500 | 30.66 | 30.66 | 38.53 | 4.94 |
239 | 241 | 6.413783 | TCTATATTAGCCACGTGGAATTCA | 57.586 | 37.500 | 38.30 | 18.90 | 37.39 | 2.57 |
266 | 268 | 4.990543 | AATGGCAATCGTATATGTGTCG | 57.009 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
267 | 269 | 2.131972 | TGGCAATCGTATATGTGTCGC | 58.868 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
268 | 270 | 2.223947 | TGGCAATCGTATATGTGTCGCT | 60.224 | 45.455 | 0.00 | 0.00 | 0.00 | 4.93 |
269 | 271 | 3.004944 | TGGCAATCGTATATGTGTCGCTA | 59.995 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
270 | 272 | 3.364023 | GGCAATCGTATATGTGTCGCTAC | 59.636 | 47.826 | 0.00 | 0.00 | 0.00 | 3.58 |
271 | 273 | 3.978855 | GCAATCGTATATGTGTCGCTACA | 59.021 | 43.478 | 0.00 | 0.00 | 34.63 | 2.74 |
284 | 286 | 5.933187 | TGTCGCTACACACAATTTTACAT | 57.067 | 34.783 | 0.00 | 0.00 | 0.00 | 2.29 |
286 | 288 | 7.422878 | TGTCGCTACACACAATTTTACATAA | 57.577 | 32.000 | 0.00 | 0.00 | 0.00 | 1.90 |
287 | 289 | 8.035165 | TGTCGCTACACACAATTTTACATAAT | 57.965 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
288 | 290 | 9.152595 | TGTCGCTACACACAATTTTACATAATA | 57.847 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
372 | 374 | 4.290093 | TGTACATATGGGCAGAGAAGACT | 58.710 | 43.478 | 7.80 | 0.00 | 0.00 | 3.24 |
377 | 379 | 5.772672 | ACATATGGGCAGAGAAGACTACTAG | 59.227 | 44.000 | 7.80 | 0.00 | 0.00 | 2.57 |
385 | 387 | 5.180271 | CAGAGAAGACTACTAGAGTTCGGT | 58.820 | 45.833 | 0.00 | 0.00 | 39.06 | 4.69 |
389 | 391 | 2.748532 | AGACTACTAGAGTTCGGTGTGC | 59.251 | 50.000 | 0.00 | 0.00 | 39.06 | 4.57 |
546 | 553 | 6.430962 | TTTTTGGATGGTTTGGATTGATCA | 57.569 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
597 | 604 | 9.084164 | CGGTATAGATTTTTGTTAGGGATATCG | 57.916 | 37.037 | 0.00 | 0.00 | 0.00 | 2.92 |
599 | 606 | 9.939802 | GTATAGATTTTTGTTAGGGATATCGGT | 57.060 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
682 | 697 | 4.864334 | CCGCACATCCTCCCAGGC | 62.864 | 72.222 | 0.00 | 0.00 | 34.61 | 4.85 |
871 | 897 | 2.127232 | GTTGTTGTGGCCTGCTGGT | 61.127 | 57.895 | 11.69 | 0.00 | 35.27 | 4.00 |
1034 | 1086 | 3.452919 | CCTAGCCCCTCCCCCTCT | 61.453 | 72.222 | 0.00 | 0.00 | 0.00 | 3.69 |
1179 | 1231 | 1.682323 | GGGTTCAACCGTTTGCCTTTA | 59.318 | 47.619 | 0.00 | 0.00 | 39.83 | 1.85 |
1220 | 1272 | 1.165270 | GGTTGTCTGCCGCAACTATT | 58.835 | 50.000 | 12.59 | 0.00 | 43.93 | 1.73 |
1444 | 1502 | 1.406539 | CAACATTGCTGCTATCCACCC | 59.593 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
1502 | 1560 | 4.764308 | TGTTAGTGTCAAAATGGCATGCTA | 59.236 | 37.500 | 18.92 | 12.99 | 33.03 | 3.49 |
1599 | 1669 | 1.739562 | CAGGCAGGAGCAAGACGTC | 60.740 | 63.158 | 7.70 | 7.70 | 44.61 | 4.34 |
1614 | 1684 | 3.643763 | AGACGTCTCAACAACATCTGAC | 58.356 | 45.455 | 13.58 | 0.00 | 0.00 | 3.51 |
1746 | 1816 | 3.740115 | AGACTGGTTTGTTAGAACGCAT | 58.260 | 40.909 | 0.00 | 0.00 | 0.00 | 4.73 |
1806 | 1877 | 7.378181 | ACATTGTGTTTGACCAATAGGAATTC | 58.622 | 34.615 | 0.00 | 0.00 | 38.69 | 2.17 |
1955 | 2056 | 3.899980 | AGATAGCCAGCAGTCATGTATGA | 59.100 | 43.478 | 4.42 | 0.00 | 0.00 | 2.15 |
2027 | 2131 | 4.630069 | ACTCCGTTATCCAATTTGAGTTCG | 59.370 | 41.667 | 0.00 | 0.00 | 0.00 | 3.95 |
2037 | 2141 | 7.129109 | TCCAATTTGAGTTCGTAACTTGATC | 57.871 | 36.000 | 0.00 | 0.00 | 43.03 | 2.92 |
2047 | 2151 | 8.252964 | AGTTCGTAACTTGATCTGTTAAATCC | 57.747 | 34.615 | 11.49 | 2.45 | 39.04 | 3.01 |
2052 | 2156 | 4.273318 | ACTTGATCTGTTAAATCCTGGGC | 58.727 | 43.478 | 0.00 | 0.00 | 0.00 | 5.36 |
2055 | 2159 | 3.010027 | TGATCTGTTAAATCCTGGGCACA | 59.990 | 43.478 | 0.00 | 0.00 | 0.00 | 4.57 |
2117 | 2459 | 6.238374 | CCAGTATTAATCGGCCTGTTAACAAG | 60.238 | 42.308 | 10.03 | 4.67 | 0.00 | 3.16 |
2206 | 2550 | 1.691976 | AGTCAATGTGTGGACCGAAGA | 59.308 | 47.619 | 0.00 | 0.00 | 34.58 | 2.87 |
2270 | 3253 | 8.135529 | GGGATTTGCAGTTATTTGGTAGAATAC | 58.864 | 37.037 | 0.00 | 0.00 | 42.04 | 1.89 |
2343 | 3326 | 3.251004 | GGATATTTGATCGGTTCAGGTGC | 59.749 | 47.826 | 0.00 | 0.00 | 35.27 | 5.01 |
2469 | 3621 | 6.702282 | GTCTCCCAGATAAAGGAAAATCTACG | 59.298 | 42.308 | 0.00 | 0.00 | 31.25 | 3.51 |
2557 | 3709 | 6.595716 | CCCAGGTTAGTTCTCAACTTATTCTG | 59.404 | 42.308 | 0.00 | 0.00 | 42.81 | 3.02 |
2594 | 3760 | 4.729227 | AGTTTTGGTTTTGTCGGACATT | 57.271 | 36.364 | 12.26 | 0.00 | 0.00 | 2.71 |
2642 | 3808 | 3.840666 | TCTGGATATCCTAAGGGACATGC | 59.159 | 47.826 | 22.35 | 0.00 | 45.43 | 4.06 |
2656 | 3822 | 0.762842 | ACATGCGTAGGGGCCAGATA | 60.763 | 55.000 | 4.39 | 0.00 | 0.00 | 1.98 |
2670 | 3836 | 5.170748 | GGGCCAGATATTGTTTTTCTTGTG | 58.829 | 41.667 | 4.39 | 0.00 | 0.00 | 3.33 |
2684 | 3850 | 8.091449 | TGTTTTTCTTGTGTTGTAATTTGTCCT | 58.909 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
2685 | 3851 | 8.379902 | GTTTTTCTTGTGTTGTAATTTGTCCTG | 58.620 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
2686 | 3852 | 6.767524 | TTCTTGTGTTGTAATTTGTCCTGT | 57.232 | 33.333 | 0.00 | 0.00 | 0.00 | 4.00 |
2687 | 3853 | 7.867305 | TTCTTGTGTTGTAATTTGTCCTGTA | 57.133 | 32.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2688 | 3854 | 7.254227 | TCTTGTGTTGTAATTTGTCCTGTAC | 57.746 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2906 | 4304 | 1.002868 | GCTCAAAGCTCAGCTCCCA | 60.003 | 57.895 | 0.00 | 0.00 | 38.25 | 4.37 |
2958 | 4366 | 2.340210 | TTTGCTGCCGCCTCATATAA | 57.660 | 45.000 | 0.00 | 0.00 | 34.43 | 0.98 |
2960 | 4368 | 1.882912 | TGCTGCCGCCTCATATAAAG | 58.117 | 50.000 | 0.00 | 0.00 | 34.43 | 1.85 |
2961 | 4369 | 1.140852 | TGCTGCCGCCTCATATAAAGT | 59.859 | 47.619 | 0.00 | 0.00 | 34.43 | 2.66 |
2974 | 4389 | 6.536582 | CCTCATATAAAGTGTCTTGAGTGTGG | 59.463 | 42.308 | 0.00 | 0.00 | 30.97 | 4.17 |
2989 | 4404 | 0.324738 | TGTGGTTTTTCTGCACCCCA | 60.325 | 50.000 | 0.00 | 0.00 | 31.24 | 4.96 |
2991 | 4406 | 1.367471 | GGTTTTTCTGCACCCCAGC | 59.633 | 57.895 | 0.00 | 0.00 | 41.50 | 4.85 |
2992 | 4407 | 1.115326 | GGTTTTTCTGCACCCCAGCT | 61.115 | 55.000 | 0.00 | 0.00 | 41.50 | 4.24 |
2993 | 4408 | 0.315251 | GTTTTTCTGCACCCCAGCTC | 59.685 | 55.000 | 0.00 | 0.00 | 41.50 | 4.09 |
2994 | 4409 | 1.172180 | TTTTTCTGCACCCCAGCTCG | 61.172 | 55.000 | 0.00 | 0.00 | 41.50 | 5.03 |
2995 | 4410 | 3.551496 | TTTCTGCACCCCAGCTCGG | 62.551 | 63.158 | 0.00 | 0.00 | 41.50 | 4.63 |
3072 | 4487 | 8.599624 | ATCTAAAAGTTTGTGGGAATGATCAT | 57.400 | 30.769 | 1.18 | 1.18 | 0.00 | 2.45 |
3073 | 4488 | 8.055279 | TCTAAAAGTTTGTGGGAATGATCATC | 57.945 | 34.615 | 9.06 | 2.77 | 0.00 | 2.92 |
3074 | 4489 | 6.669125 | AAAAGTTTGTGGGAATGATCATCA | 57.331 | 33.333 | 9.06 | 0.00 | 0.00 | 3.07 |
3088 | 4503 | 8.680903 | GGAATGATCATCAACAAATGTTAGAGT | 58.319 | 33.333 | 9.06 | 0.00 | 36.32 | 3.24 |
3198 | 4624 | 6.342338 | AGAACTAAAACCGAGTACATGAGT | 57.658 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
3232 | 4661 | 0.183014 | TACTAGGCACGAGGAGGAGG | 59.817 | 60.000 | 0.00 | 0.00 | 34.62 | 4.30 |
3233 | 4662 | 1.227664 | CTAGGCACGAGGAGGAGGA | 59.772 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
3234 | 4663 | 0.821711 | CTAGGCACGAGGAGGAGGAG | 60.822 | 65.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3235 | 4664 | 2.285889 | TAGGCACGAGGAGGAGGAGG | 62.286 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3236 | 4665 | 3.151022 | GCACGAGGAGGAGGAGGG | 61.151 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
3237 | 4666 | 2.443016 | CACGAGGAGGAGGAGGGG | 60.443 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
3274 | 4707 | 2.061220 | CAGGTGGTGCCTCAGAAGA | 58.939 | 57.895 | 0.00 | 0.00 | 46.96 | 2.87 |
3292 | 4725 | 6.934645 | TCAGAAGAACACCTTTCGATATTTGT | 59.065 | 34.615 | 0.00 | 0.00 | 34.68 | 2.83 |
3398 | 4831 | 3.001414 | CTGGCATTCTCTGTGACAAGAG | 58.999 | 50.000 | 5.92 | 5.92 | 44.34 | 2.85 |
3417 | 4850 | 2.485814 | GAGGAGTGCCACAAAAGCTAAG | 59.514 | 50.000 | 0.00 | 0.00 | 36.29 | 2.18 |
3429 | 4862 | 4.889995 | ACAAAAGCTAAGAGGCAAGTTCTT | 59.110 | 37.500 | 0.00 | 0.00 | 38.40 | 2.52 |
3430 | 4863 | 6.017109 | CACAAAAGCTAAGAGGCAAGTTCTTA | 60.017 | 38.462 | 0.00 | 0.00 | 36.38 | 2.10 |
3431 | 4864 | 6.717084 | ACAAAAGCTAAGAGGCAAGTTCTTAT | 59.283 | 34.615 | 0.00 | 0.00 | 36.75 | 1.73 |
3503 | 4939 | 6.569179 | ACTAAAAGGCGACATGTTTAACAT | 57.431 | 33.333 | 4.56 | 4.56 | 39.91 | 2.71 |
3604 | 5041 | 3.301274 | GAGATAGAGTTGGGGTAGCACT | 58.699 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
3607 | 5044 | 1.729586 | AGAGTTGGGGTAGCACTGAA | 58.270 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3663 | 5100 | 0.625316 | TGGGCATATTCAGTGCAGGT | 59.375 | 50.000 | 0.00 | 0.00 | 44.25 | 4.00 |
3713 | 5151 | 3.546815 | GGCTAAAGCGTGCTGATAATGTG | 60.547 | 47.826 | 0.00 | 0.00 | 43.26 | 3.21 |
3755 | 5193 | 2.334006 | ACTTGACATGGGAGGAGTCT | 57.666 | 50.000 | 0.00 | 0.00 | 33.56 | 3.24 |
3773 | 5211 | 7.967908 | AGGAGTCTGTAAAGAAAGATCTGAAA | 58.032 | 34.615 | 0.00 | 0.00 | 35.59 | 2.69 |
3820 | 5258 | 4.394712 | GGACAGGGGTGCGTGGAG | 62.395 | 72.222 | 0.00 | 0.00 | 0.00 | 3.86 |
3869 | 5310 | 4.038763 | TGAGTTGGTTGTGAGATCTTACGT | 59.961 | 41.667 | 12.51 | 0.00 | 0.00 | 3.57 |
4017 | 5473 | 4.193826 | TGTACAGAGCTTCTTGGATGTC | 57.806 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
4023 | 5479 | 4.698780 | CAGAGCTTCTTGGATGTCATTTGA | 59.301 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
4036 | 5492 | 6.295011 | GGATGTCATTTGACCACCAAACATTA | 60.295 | 38.462 | 8.16 | 0.00 | 46.41 | 1.90 |
4066 | 5532 | 5.648178 | TGTTGATGATCATTCCCACAAAG | 57.352 | 39.130 | 10.14 | 0.00 | 0.00 | 2.77 |
4075 | 5541 | 8.421249 | TGATCATTCCCACAAAGTTTTAGATT | 57.579 | 30.769 | 0.00 | 0.00 | 0.00 | 2.40 |
4383 | 5853 | 1.111116 | AATGAATGGATGCCGCTGGG | 61.111 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
4404 | 5874 | 7.176589 | TGGGAATATGTTGGTTATTTGGTTC | 57.823 | 36.000 | 0.00 | 0.00 | 0.00 | 3.62 |
4467 | 6134 | 7.047891 | TGGTATAATGGTCTCTTAGCAGTTTG | 58.952 | 38.462 | 0.00 | 0.00 | 39.39 | 2.93 |
5104 | 6771 | 1.067295 | TGATGGGAGGTGTCTTTGCT | 58.933 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
5130 | 6797 | 0.304705 | CGCAACCTATTGGCATCGAC | 59.695 | 55.000 | 0.00 | 0.00 | 36.23 | 4.20 |
5279 | 6961 | 5.064071 | GCATGGAGTAGAGAAGCTAACAAAC | 59.936 | 44.000 | 0.00 | 0.00 | 0.00 | 2.93 |
5305 | 7005 | 6.655003 | GGATGTTCAGTGGAGATTAGACAAAA | 59.345 | 38.462 | 0.00 | 0.00 | 0.00 | 2.44 |
5306 | 7006 | 7.148340 | GGATGTTCAGTGGAGATTAGACAAAAG | 60.148 | 40.741 | 0.00 | 0.00 | 0.00 | 2.27 |
5307 | 7007 | 6.826668 | TGTTCAGTGGAGATTAGACAAAAGA | 58.173 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
5308 | 7008 | 6.706270 | TGTTCAGTGGAGATTAGACAAAAGAC | 59.294 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
5311 | 7011 | 6.042093 | TCAGTGGAGATTAGACAAAAGACAGT | 59.958 | 38.462 | 0.00 | 0.00 | 0.00 | 3.55 |
5312 | 7012 | 6.708054 | CAGTGGAGATTAGACAAAAGACAGTT | 59.292 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
5348 | 7051 | 7.676683 | TTTTGTATAGGGTCAGAAGATAGCT | 57.323 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
5365 | 7068 | 1.486726 | AGCTATAGGACTTGTGCCCAC | 59.513 | 52.381 | 1.04 | 0.00 | 0.00 | 4.61 |
5510 | 7214 | 8.469309 | AATTCCTTGGTATATCTTGTCCAATG | 57.531 | 34.615 | 0.00 | 0.00 | 38.90 | 2.82 |
5511 | 7215 | 5.376625 | TCCTTGGTATATCTTGTCCAATGC | 58.623 | 41.667 | 0.00 | 0.00 | 38.90 | 3.56 |
5515 | 7219 | 7.667219 | CCTTGGTATATCTTGTCCAATGCTATT | 59.333 | 37.037 | 0.00 | 0.00 | 38.90 | 1.73 |
5517 | 7221 | 8.621532 | TGGTATATCTTGTCCAATGCTATTTC | 57.378 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
5518 | 7222 | 8.217111 | TGGTATATCTTGTCCAATGCTATTTCA | 58.783 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
5519 | 7223 | 8.725148 | GGTATATCTTGTCCAATGCTATTTCAG | 58.275 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
5520 | 7224 | 9.494271 | GTATATCTTGTCCAATGCTATTTCAGA | 57.506 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
5523 | 7227 | 8.618702 | ATCTTGTCCAATGCTATTTCAGATAG | 57.381 | 34.615 | 0.00 | 0.00 | 0.00 | 2.08 |
5524 | 7228 | 6.484643 | TCTTGTCCAATGCTATTTCAGATAGC | 59.515 | 38.462 | 10.32 | 10.32 | 45.28 | 2.97 |
5534 | 7238 | 6.840075 | GCTATTTCAGATAGCATGATGGAAC | 58.160 | 40.000 | 11.93 | 0.00 | 44.64 | 3.62 |
5535 | 7239 | 6.429078 | GCTATTTCAGATAGCATGATGGAACA | 59.571 | 38.462 | 11.93 | 0.00 | 44.64 | 3.18 |
5536 | 7240 | 7.120873 | GCTATTTCAGATAGCATGATGGAACAT | 59.879 | 37.037 | 11.93 | 0.00 | 44.31 | 2.71 |
5544 | 7248 | 5.217978 | AGCATGATGGAACATGTTTGTTT | 57.782 | 34.783 | 13.36 | 0.00 | 46.01 | 2.83 |
5545 | 7249 | 4.992319 | AGCATGATGGAACATGTTTGTTTG | 59.008 | 37.500 | 13.36 | 7.52 | 46.01 | 2.93 |
5546 | 7250 | 4.751098 | GCATGATGGAACATGTTTGTTTGT | 59.249 | 37.500 | 13.36 | 0.00 | 46.01 | 2.83 |
5547 | 7251 | 5.925397 | GCATGATGGAACATGTTTGTTTGTA | 59.075 | 36.000 | 13.36 | 0.00 | 46.01 | 2.41 |
5548 | 7252 | 6.423302 | GCATGATGGAACATGTTTGTTTGTAA | 59.577 | 34.615 | 13.36 | 0.00 | 46.01 | 2.41 |
5549 | 7253 | 7.359431 | GCATGATGGAACATGTTTGTTTGTAAG | 60.359 | 37.037 | 13.36 | 0.38 | 46.01 | 2.34 |
5550 | 7254 | 6.511416 | TGATGGAACATGTTTGTTTGTAAGG | 58.489 | 36.000 | 13.36 | 0.00 | 46.01 | 2.69 |
5551 | 7255 | 5.923733 | TGGAACATGTTTGTTTGTAAGGT | 57.076 | 34.783 | 13.36 | 0.00 | 46.01 | 3.50 |
5556 | 7260 | 4.276431 | ACATGTTTGTTTGTAAGGTACGGG | 59.724 | 41.667 | 0.00 | 0.00 | 29.55 | 5.28 |
5565 | 7269 | 1.956477 | GTAAGGTACGGGCCTATTCGA | 59.044 | 52.381 | 0.84 | 0.00 | 38.03 | 3.71 |
5590 | 7294 | 6.874278 | TCAAGGGAATCTGATGAGTTAAGA | 57.126 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
5592 | 7296 | 7.865820 | TCAAGGGAATCTGATGAGTTAAGAAT | 58.134 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
5593 | 7297 | 7.989741 | TCAAGGGAATCTGATGAGTTAAGAATC | 59.010 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
5602 | 7307 | 8.534496 | TCTGATGAGTTAAGAATCATTGTCTCA | 58.466 | 33.333 | 0.00 | 0.00 | 36.30 | 3.27 |
5638 | 7343 | 2.287608 | GGAGTTTGTTTCGCTTTCAGGG | 60.288 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
5676 | 7381 | 4.066646 | TGTTGCTGTGAGCTAGTTTGTA | 57.933 | 40.909 | 0.00 | 0.00 | 42.97 | 2.41 |
5678 | 7383 | 3.040147 | TGCTGTGAGCTAGTTTGTACC | 57.960 | 47.619 | 0.00 | 0.00 | 42.97 | 3.34 |
5679 | 7384 | 2.367241 | TGCTGTGAGCTAGTTTGTACCA | 59.633 | 45.455 | 0.00 | 0.00 | 42.97 | 3.25 |
5680 | 7385 | 3.181459 | TGCTGTGAGCTAGTTTGTACCAA | 60.181 | 43.478 | 0.00 | 0.00 | 42.97 | 3.67 |
5681 | 7386 | 4.003648 | GCTGTGAGCTAGTTTGTACCAAT | 58.996 | 43.478 | 0.00 | 0.00 | 38.45 | 3.16 |
5682 | 7387 | 5.175859 | GCTGTGAGCTAGTTTGTACCAATA | 58.824 | 41.667 | 0.00 | 0.00 | 38.45 | 1.90 |
5721 | 7498 | 3.476552 | CCGATTTATAGAGCTGGGCAAA | 58.523 | 45.455 | 0.00 | 0.00 | 0.00 | 3.68 |
5726 | 7503 | 2.706339 | ATAGAGCTGGGCAAAGTCTG | 57.294 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5732 | 7511 | 1.002544 | GCTGGGCAAAGTCTGACTACT | 59.997 | 52.381 | 11.30 | 0.00 | 31.36 | 2.57 |
5748 | 7527 | 5.506708 | TGACTACTATCACTTGGACTAGCA | 58.493 | 41.667 | 0.00 | 0.00 | 0.00 | 3.49 |
5788 | 7567 | 8.802267 | TCAGCTAGCTAAACAATAAACCAAAAT | 58.198 | 29.630 | 18.86 | 0.00 | 0.00 | 1.82 |
5828 | 7607 | 9.314321 | TCGAGTCTGTTCTTATGGAATTATTTC | 57.686 | 33.333 | 0.00 | 0.00 | 36.24 | 2.17 |
5866 | 7645 | 0.240945 | GATGGCAAACAACCGGTCTG | 59.759 | 55.000 | 8.04 | 11.45 | 0.00 | 3.51 |
5869 | 7648 | 0.310854 | GGCAAACAACCGGTCTGAAG | 59.689 | 55.000 | 8.04 | 0.00 | 0.00 | 3.02 |
5874 | 7653 | 4.351192 | CAAACAACCGGTCTGAAGAAAAG | 58.649 | 43.478 | 8.04 | 0.00 | 0.00 | 2.27 |
5875 | 7654 | 3.553828 | ACAACCGGTCTGAAGAAAAGA | 57.446 | 42.857 | 8.04 | 0.00 | 0.00 | 2.52 |
5876 | 7655 | 4.086706 | ACAACCGGTCTGAAGAAAAGAT | 57.913 | 40.909 | 8.04 | 0.00 | 0.00 | 2.40 |
5877 | 7656 | 3.815401 | ACAACCGGTCTGAAGAAAAGATG | 59.185 | 43.478 | 8.04 | 0.00 | 0.00 | 2.90 |
5878 | 7657 | 4.065088 | CAACCGGTCTGAAGAAAAGATGA | 58.935 | 43.478 | 8.04 | 0.00 | 0.00 | 2.92 |
5880 | 7659 | 4.911390 | ACCGGTCTGAAGAAAAGATGAAT | 58.089 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
5881 | 7660 | 4.938226 | ACCGGTCTGAAGAAAAGATGAATC | 59.062 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
5883 | 7662 | 5.181748 | CGGTCTGAAGAAAAGATGAATCCT | 58.818 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
5884 | 7663 | 5.064452 | CGGTCTGAAGAAAAGATGAATCCTG | 59.936 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5885 | 7664 | 5.163673 | GGTCTGAAGAAAAGATGAATCCTGC | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 4.85 |
5887 | 7666 | 5.413833 | TCTGAAGAAAAGATGAATCCTGCAC | 59.586 | 40.000 | 0.00 | 0.00 | 0.00 | 4.57 |
5889 | 7668 | 5.771666 | TGAAGAAAAGATGAATCCTGCACTT | 59.228 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5891 | 7670 | 5.568392 | AGAAAAGATGAATCCTGCACTTCT | 58.432 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
5893 | 7672 | 5.893897 | AAAGATGAATCCTGCACTTCTTC | 57.106 | 39.130 | 3.78 | 5.34 | 31.19 | 2.87 |
5894 | 7673 | 4.564782 | AGATGAATCCTGCACTTCTTCA | 57.435 | 40.909 | 13.07 | 7.64 | 31.45 | 3.02 |
5895 | 7674 | 4.260170 | AGATGAATCCTGCACTTCTTCAC | 58.740 | 43.478 | 13.07 | 4.33 | 31.45 | 3.18 |
5896 | 7675 | 2.416747 | TGAATCCTGCACTTCTTCACG | 58.583 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
5897 | 7676 | 1.129437 | GAATCCTGCACTTCTTCACGC | 59.871 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
5898 | 7677 | 0.674895 | ATCCTGCACTTCTTCACGCC | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
5922 | 7709 | 2.542595 | CGTGTTGACAACCAGTTCCTAC | 59.457 | 50.000 | 15.59 | 3.80 | 0.00 | 3.18 |
5923 | 7710 | 2.542595 | GTGTTGACAACCAGTTCCTACG | 59.457 | 50.000 | 15.59 | 0.00 | 0.00 | 3.51 |
5924 | 7711 | 2.168936 | TGTTGACAACCAGTTCCTACGT | 59.831 | 45.455 | 15.59 | 0.00 | 0.00 | 3.57 |
5925 | 7712 | 3.200483 | GTTGACAACCAGTTCCTACGTT | 58.800 | 45.455 | 7.10 | 0.00 | 0.00 | 3.99 |
5926 | 7713 | 3.547054 | TGACAACCAGTTCCTACGTTT | 57.453 | 42.857 | 0.00 | 0.00 | 0.00 | 3.60 |
5959 | 7791 | 2.104170 | CCGTTAGGAAAGAGAGAGCCT | 58.896 | 52.381 | 0.00 | 0.00 | 41.02 | 4.58 |
5960 | 7792 | 2.100087 | CCGTTAGGAAAGAGAGAGCCTC | 59.900 | 54.545 | 0.00 | 0.00 | 41.02 | 4.70 |
5961 | 7793 | 2.100087 | CGTTAGGAAAGAGAGAGCCTCC | 59.900 | 54.545 | 0.00 | 0.00 | 42.97 | 4.30 |
5962 | 7794 | 2.060050 | TAGGAAAGAGAGAGCCTCCG | 57.940 | 55.000 | 0.00 | 0.00 | 42.97 | 4.63 |
5963 | 7795 | 0.040499 | AGGAAAGAGAGAGCCTCCGT | 59.960 | 55.000 | 0.00 | 0.00 | 42.97 | 4.69 |
5964 | 7796 | 0.899019 | GGAAAGAGAGAGCCTCCGTT | 59.101 | 55.000 | 0.00 | 0.00 | 42.97 | 4.44 |
5965 | 7797 | 2.100989 | GGAAAGAGAGAGCCTCCGTTA | 58.899 | 52.381 | 0.00 | 0.00 | 42.97 | 3.18 |
6007 | 7839 | 5.358160 | TCAGCTGATCGTTTGAATCTCTCTA | 59.642 | 40.000 | 13.74 | 0.00 | 0.00 | 2.43 |
6020 | 7852 | 3.963428 | TCTCTCTAAGAACTGGTTGCC | 57.037 | 47.619 | 0.00 | 0.00 | 0.00 | 4.52 |
6025 | 7857 | 0.771127 | TAAGAACTGGTTGCCCTGCT | 59.229 | 50.000 | 0.00 | 0.00 | 33.14 | 4.24 |
6043 | 7875 | 6.070538 | GCCCTGCTCTAAAGGAGATATGAATA | 60.071 | 42.308 | 0.00 | 0.00 | 43.27 | 1.75 |
6075 | 7907 | 1.138671 | GCATAACGCGGGTGCAAAT | 59.861 | 52.632 | 22.05 | 0.00 | 42.97 | 2.32 |
6095 | 7927 | 6.075046 | GCAAATAATATCCGAAGCGTTTTTCC | 60.075 | 38.462 | 0.00 | 0.00 | 0.00 | 3.13 |
6096 | 7928 | 6.687081 | AATAATATCCGAAGCGTTTTTCCA | 57.313 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
6097 | 7929 | 4.351131 | AATATCCGAAGCGTTTTTCCAC | 57.649 | 40.909 | 0.00 | 0.00 | 0.00 | 4.02 |
6098 | 7930 | 0.515564 | ATCCGAAGCGTTTTTCCACG | 59.484 | 50.000 | 0.00 | 0.00 | 43.36 | 4.94 |
6099 | 7931 | 0.810823 | TCCGAAGCGTTTTTCCACGT | 60.811 | 50.000 | 0.00 | 0.00 | 42.43 | 4.49 |
6100 | 7932 | 0.656205 | CCGAAGCGTTTTTCCACGTG | 60.656 | 55.000 | 9.08 | 9.08 | 42.43 | 4.49 |
6101 | 7933 | 0.656205 | CGAAGCGTTTTTCCACGTGG | 60.656 | 55.000 | 29.26 | 29.26 | 42.43 | 4.94 |
6102 | 7934 | 0.933047 | GAAGCGTTTTTCCACGTGGC | 60.933 | 55.000 | 30.25 | 15.83 | 42.43 | 5.01 |
6103 | 7935 | 1.658686 | AAGCGTTTTTCCACGTGGCA | 61.659 | 50.000 | 30.25 | 17.74 | 42.43 | 4.92 |
6104 | 7936 | 1.226717 | GCGTTTTTCCACGTGGCAA | 60.227 | 52.632 | 30.25 | 23.22 | 42.43 | 4.52 |
6105 | 7937 | 0.596341 | GCGTTTTTCCACGTGGCAAT | 60.596 | 50.000 | 30.25 | 0.00 | 42.43 | 3.56 |
6106 | 7938 | 1.127701 | CGTTTTTCCACGTGGCAATG | 58.872 | 50.000 | 30.25 | 20.99 | 35.34 | 2.82 |
6107 | 7939 | 1.496934 | GTTTTTCCACGTGGCAATGG | 58.503 | 50.000 | 30.25 | 11.92 | 37.32 | 3.16 |
6108 | 7940 | 0.249657 | TTTTTCCACGTGGCAATGGC | 60.250 | 50.000 | 30.25 | 0.00 | 35.81 | 4.40 |
6118 | 7950 | 2.486966 | GCAATGGCCGAGAACAGC | 59.513 | 61.111 | 0.00 | 0.00 | 0.00 | 4.40 |
6119 | 7951 | 2.334946 | GCAATGGCCGAGAACAGCA | 61.335 | 57.895 | 0.00 | 0.00 | 0.00 | 4.41 |
6120 | 7952 | 1.798735 | CAATGGCCGAGAACAGCAG | 59.201 | 57.895 | 0.00 | 0.00 | 0.00 | 4.24 |
6121 | 7953 | 0.674581 | CAATGGCCGAGAACAGCAGA | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
6122 | 7954 | 0.036732 | AATGGCCGAGAACAGCAGAA | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
6123 | 7955 | 0.392193 | ATGGCCGAGAACAGCAGAAG | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
6124 | 7956 | 2.394563 | GGCCGAGAACAGCAGAAGC | 61.395 | 63.158 | 0.00 | 0.00 | 42.56 | 3.86 |
6125 | 7957 | 1.669115 | GCCGAGAACAGCAGAAGCA | 60.669 | 57.895 | 0.00 | 0.00 | 45.49 | 3.91 |
6126 | 7958 | 1.023513 | GCCGAGAACAGCAGAAGCAT | 61.024 | 55.000 | 0.00 | 0.00 | 45.49 | 3.79 |
6127 | 7959 | 0.725686 | CCGAGAACAGCAGAAGCATG | 59.274 | 55.000 | 0.00 | 0.00 | 45.49 | 4.06 |
6128 | 7960 | 0.725686 | CGAGAACAGCAGAAGCATGG | 59.274 | 55.000 | 0.00 | 0.00 | 45.49 | 3.66 |
6129 | 7961 | 0.450983 | GAGAACAGCAGAAGCATGGC | 59.549 | 55.000 | 0.00 | 0.00 | 45.49 | 4.40 |
6130 | 7962 | 0.251033 | AGAACAGCAGAAGCATGGCA | 60.251 | 50.000 | 0.00 | 0.00 | 45.49 | 4.92 |
6131 | 7963 | 0.599558 | GAACAGCAGAAGCATGGCAA | 59.400 | 50.000 | 0.00 | 0.00 | 45.49 | 4.52 |
6132 | 7964 | 0.316204 | AACAGCAGAAGCATGGCAAC | 59.684 | 50.000 | 0.00 | 0.00 | 45.49 | 4.17 |
6133 | 7965 | 0.538977 | ACAGCAGAAGCATGGCAACT | 60.539 | 50.000 | 0.00 | 0.00 | 45.49 | 3.16 |
6134 | 7966 | 0.601558 | CAGCAGAAGCATGGCAACTT | 59.398 | 50.000 | 5.89 | 5.89 | 45.49 | 2.66 |
6135 | 7967 | 1.000506 | CAGCAGAAGCATGGCAACTTT | 59.999 | 47.619 | 7.47 | 0.00 | 45.49 | 2.66 |
6136 | 7968 | 2.229543 | CAGCAGAAGCATGGCAACTTTA | 59.770 | 45.455 | 7.47 | 0.00 | 45.49 | 1.85 |
6137 | 7969 | 2.892852 | AGCAGAAGCATGGCAACTTTAA | 59.107 | 40.909 | 7.47 | 0.00 | 45.49 | 1.52 |
6138 | 7970 | 3.057033 | AGCAGAAGCATGGCAACTTTAAG | 60.057 | 43.478 | 7.47 | 0.00 | 45.49 | 1.85 |
6139 | 7971 | 3.248266 | CAGAAGCATGGCAACTTTAAGC | 58.752 | 45.455 | 7.47 | 0.00 | 37.61 | 3.09 |
6140 | 7972 | 3.057033 | CAGAAGCATGGCAACTTTAAGCT | 60.057 | 43.478 | 7.47 | 0.00 | 37.61 | 3.74 |
6141 | 7973 | 3.575687 | AGAAGCATGGCAACTTTAAGCTT | 59.424 | 39.130 | 3.48 | 3.48 | 42.82 | 3.74 |
6142 | 7974 | 3.582714 | AGCATGGCAACTTTAAGCTTC | 57.417 | 42.857 | 0.00 | 0.00 | 37.61 | 3.86 |
6143 | 7975 | 3.160269 | AGCATGGCAACTTTAAGCTTCT | 58.840 | 40.909 | 0.00 | 0.00 | 37.61 | 2.85 |
6144 | 7976 | 3.192212 | AGCATGGCAACTTTAAGCTTCTC | 59.808 | 43.478 | 0.00 | 0.00 | 37.61 | 2.87 |
6145 | 7977 | 3.674410 | GCATGGCAACTTTAAGCTTCTCC | 60.674 | 47.826 | 0.00 | 0.00 | 37.61 | 3.71 |
6146 | 7978 | 2.514803 | TGGCAACTTTAAGCTTCTCCC | 58.485 | 47.619 | 0.00 | 0.00 | 37.61 | 4.30 |
6147 | 7979 | 2.108250 | TGGCAACTTTAAGCTTCTCCCT | 59.892 | 45.455 | 0.00 | 0.00 | 37.61 | 4.20 |
6148 | 7980 | 3.329520 | TGGCAACTTTAAGCTTCTCCCTA | 59.670 | 43.478 | 0.00 | 0.00 | 37.61 | 3.53 |
6149 | 7981 | 3.690139 | GGCAACTTTAAGCTTCTCCCTAC | 59.310 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
6150 | 7982 | 4.324267 | GCAACTTTAAGCTTCTCCCTACA | 58.676 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
6151 | 7983 | 4.760204 | GCAACTTTAAGCTTCTCCCTACAA | 59.240 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
6152 | 7984 | 5.334957 | GCAACTTTAAGCTTCTCCCTACAAC | 60.335 | 44.000 | 0.00 | 0.00 | 0.00 | 3.32 |
6153 | 7985 | 4.907809 | ACTTTAAGCTTCTCCCTACAACC | 58.092 | 43.478 | 0.00 | 0.00 | 0.00 | 3.77 |
6154 | 7986 | 4.597940 | ACTTTAAGCTTCTCCCTACAACCT | 59.402 | 41.667 | 0.00 | 0.00 | 0.00 | 3.50 |
6155 | 7987 | 5.783875 | ACTTTAAGCTTCTCCCTACAACCTA | 59.216 | 40.000 | 0.00 | 0.00 | 0.00 | 3.08 |
6156 | 7988 | 6.444171 | ACTTTAAGCTTCTCCCTACAACCTAT | 59.556 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
6157 | 7989 | 6.481434 | TTAAGCTTCTCCCTACAACCTATC | 57.519 | 41.667 | 0.00 | 0.00 | 0.00 | 2.08 |
6158 | 7990 | 3.995636 | AGCTTCTCCCTACAACCTATCA | 58.004 | 45.455 | 0.00 | 0.00 | 0.00 | 2.15 |
6159 | 7991 | 4.362677 | AGCTTCTCCCTACAACCTATCAA | 58.637 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
6160 | 7992 | 4.407296 | AGCTTCTCCCTACAACCTATCAAG | 59.593 | 45.833 | 0.00 | 0.00 | 0.00 | 3.02 |
6161 | 7993 | 4.698575 | CTTCTCCCTACAACCTATCAAGC | 58.301 | 47.826 | 0.00 | 0.00 | 0.00 | 4.01 |
6162 | 7994 | 2.693591 | TCTCCCTACAACCTATCAAGCG | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 4.68 |
6163 | 7995 | 2.693591 | CTCCCTACAACCTATCAAGCGA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 4.93 |
6164 | 7996 | 2.429610 | TCCCTACAACCTATCAAGCGAC | 59.570 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
6165 | 7997 | 2.167693 | CCCTACAACCTATCAAGCGACA | 59.832 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
6166 | 7998 | 3.187700 | CCTACAACCTATCAAGCGACAC | 58.812 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
6167 | 7999 | 3.119101 | CCTACAACCTATCAAGCGACACT | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 3.55 |
6168 | 8000 | 4.097437 | CCTACAACCTATCAAGCGACACTA | 59.903 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
6169 | 8001 | 3.846360 | ACAACCTATCAAGCGACACTAC | 58.154 | 45.455 | 0.00 | 0.00 | 0.00 | 2.73 |
6170 | 8002 | 3.187700 | CAACCTATCAAGCGACACTACC | 58.812 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
6171 | 8003 | 2.736347 | ACCTATCAAGCGACACTACCT | 58.264 | 47.619 | 0.00 | 0.00 | 0.00 | 3.08 |
6172 | 8004 | 2.427453 | ACCTATCAAGCGACACTACCTG | 59.573 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6173 | 8005 | 2.464865 | CTATCAAGCGACACTACCTGC | 58.535 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
6174 | 8006 | 0.608130 | ATCAAGCGACACTACCTGCA | 59.392 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
6175 | 8007 | 0.319555 | TCAAGCGACACTACCTGCAC | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
6176 | 8008 | 0.599991 | CAAGCGACACTACCTGCACA | 60.600 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
6177 | 8009 | 0.600255 | AAGCGACACTACCTGCACAC | 60.600 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
6178 | 8010 | 1.300620 | GCGACACTACCTGCACACA | 60.301 | 57.895 | 0.00 | 0.00 | 0.00 | 3.72 |
6179 | 8011 | 0.878523 | GCGACACTACCTGCACACAA | 60.879 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
6180 | 8012 | 1.795768 | CGACACTACCTGCACACAAT | 58.204 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
6181 | 8013 | 2.929161 | GCGACACTACCTGCACACAATA | 60.929 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
6182 | 8014 | 3.322369 | CGACACTACCTGCACACAATAA | 58.678 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 2.743183 | GCACCCACAGTATAGAGGCAAG | 60.743 | 54.545 | 0.00 | 0.00 | 0.00 | 4.01 |
1 | 2 | 1.209504 | GCACCCACAGTATAGAGGCAA | 59.790 | 52.381 | 0.00 | 0.00 | 0.00 | 4.52 |
2 | 3 | 0.830648 | GCACCCACAGTATAGAGGCA | 59.169 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
3 | 4 | 0.106894 | GGCACCCACAGTATAGAGGC | 59.893 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
4 | 5 | 1.496060 | TGGCACCCACAGTATAGAGG | 58.504 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
5 | 6 | 2.700371 | TCATGGCACCCACAGTATAGAG | 59.300 | 50.000 | 0.00 | 0.00 | 35.80 | 2.43 |
6 | 7 | 2.758130 | TCATGGCACCCACAGTATAGA | 58.242 | 47.619 | 0.00 | 0.00 | 35.80 | 1.98 |
7 | 8 | 3.558931 | TTCATGGCACCCACAGTATAG | 57.441 | 47.619 | 0.00 | 0.00 | 35.80 | 1.31 |
8 | 9 | 3.616219 | GTTTCATGGCACCCACAGTATA | 58.384 | 45.455 | 0.00 | 0.00 | 35.80 | 1.47 |
9 | 10 | 2.446435 | GTTTCATGGCACCCACAGTAT | 58.554 | 47.619 | 0.00 | 0.00 | 35.80 | 2.12 |
10 | 11 | 1.546773 | GGTTTCATGGCACCCACAGTA | 60.547 | 52.381 | 0.00 | 0.00 | 35.80 | 2.74 |
11 | 12 | 0.827507 | GGTTTCATGGCACCCACAGT | 60.828 | 55.000 | 0.00 | 0.00 | 35.80 | 3.55 |
12 | 13 | 0.540365 | AGGTTTCATGGCACCCACAG | 60.540 | 55.000 | 9.86 | 0.00 | 35.80 | 3.66 |
13 | 14 | 0.539438 | GAGGTTTCATGGCACCCACA | 60.539 | 55.000 | 9.86 | 0.00 | 35.80 | 4.17 |
14 | 15 | 1.250840 | GGAGGTTTCATGGCACCCAC | 61.251 | 60.000 | 9.86 | 5.83 | 35.80 | 4.61 |
139 | 141 | 9.796120 | CTTGTTGTTTAGAATTTACCAAGACAA | 57.204 | 29.630 | 0.00 | 0.00 | 30.90 | 3.18 |
172 | 174 | 5.464722 | GCATGTCGATGTGTCTAATTCTGAT | 59.535 | 40.000 | 0.00 | 0.00 | 31.50 | 2.90 |
178 | 180 | 3.249320 | GCATGCATGTCGATGTGTCTAAT | 59.751 | 43.478 | 26.79 | 0.00 | 31.50 | 1.73 |
189 | 191 | 1.065109 | CCATGTGGCATGCATGTCG | 59.935 | 57.895 | 25.23 | 11.47 | 41.38 | 4.35 |
194 | 196 | 1.966354 | TGTTTAACCATGTGGCATGCA | 59.034 | 42.857 | 21.36 | 2.54 | 39.32 | 3.96 |
197 | 199 | 8.710749 | ATATAGATTGTTTAACCATGTGGCAT | 57.289 | 30.769 | 0.00 | 0.00 | 39.32 | 4.40 |
207 | 209 | 8.280497 | CCACGTGGCTAATATAGATTGTTTAAC | 58.720 | 37.037 | 24.02 | 0.00 | 0.00 | 2.01 |
208 | 210 | 8.205512 | TCCACGTGGCTAATATAGATTGTTTAA | 58.794 | 33.333 | 30.25 | 2.14 | 34.44 | 1.52 |
224 | 226 | 6.239008 | CCATTAATTATGAATTCCACGTGGCT | 60.239 | 38.462 | 30.25 | 16.44 | 36.26 | 4.75 |
229 | 231 | 7.060979 | CGATTGCCATTAATTATGAATTCCACG | 59.939 | 37.037 | 2.27 | 0.00 | 36.26 | 4.94 |
262 | 264 | 5.933187 | ATGTAAAATTGTGTGTAGCGACA | 57.067 | 34.783 | 0.00 | 0.00 | 0.00 | 4.35 |
360 | 362 | 4.034742 | CGAACTCTAGTAGTCTTCTCTGCC | 59.965 | 50.000 | 0.00 | 0.00 | 37.50 | 4.85 |
372 | 374 | 2.486982 | GTCTGCACACCGAACTCTAGTA | 59.513 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
377 | 379 | 1.195448 | CATTGTCTGCACACCGAACTC | 59.805 | 52.381 | 0.00 | 0.00 | 29.76 | 3.01 |
389 | 391 | 8.586570 | TTTTATTTTACACCTTGCATTGTCTG | 57.413 | 30.769 | 0.00 | 0.00 | 0.00 | 3.51 |
455 | 457 | 5.508200 | TCCCCGCAATTGTGTAATTATTC | 57.492 | 39.130 | 17.34 | 0.00 | 34.81 | 1.75 |
595 | 602 | 5.048013 | CCTGTGCAGTTGATATCTATACCGA | 60.048 | 44.000 | 3.98 | 0.00 | 0.00 | 4.69 |
596 | 603 | 5.164233 | CCTGTGCAGTTGATATCTATACCG | 58.836 | 45.833 | 3.98 | 0.00 | 0.00 | 4.02 |
597 | 604 | 5.928839 | CACCTGTGCAGTTGATATCTATACC | 59.071 | 44.000 | 3.98 | 0.00 | 0.00 | 2.73 |
599 | 606 | 6.976934 | TCACCTGTGCAGTTGATATCTATA | 57.023 | 37.500 | 3.98 | 0.00 | 0.00 | 1.31 |
602 | 609 | 4.767578 | ATCACCTGTGCAGTTGATATCT | 57.232 | 40.909 | 9.93 | 0.00 | 38.55 | 1.98 |
776 | 792 | 3.043713 | CTGCGCGCCAGAGACAAA | 61.044 | 61.111 | 30.77 | 5.02 | 44.64 | 2.83 |
1174 | 1226 | 3.606687 | ACCGGCTACACAGAAATAAAGG | 58.393 | 45.455 | 0.00 | 0.00 | 0.00 | 3.11 |
1179 | 1231 | 0.606604 | ACGACCGGCTACACAGAAAT | 59.393 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
1220 | 1272 | 1.965930 | CGTACAAGGCTTGCCTGCA | 60.966 | 57.895 | 26.45 | 4.70 | 34.04 | 4.41 |
1444 | 1502 | 1.928503 | GCATGACATTCAAATTGGCCG | 59.071 | 47.619 | 0.00 | 0.00 | 0.00 | 6.13 |
1614 | 1684 | 1.656818 | ATTTGAAGCCGGTGCCATCG | 61.657 | 55.000 | 1.90 | 0.00 | 38.69 | 3.84 |
1746 | 1816 | 7.068839 | TGCAGAAAATAAACCAGACAAACCTTA | 59.931 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
1955 | 2056 | 8.462811 | TGTGTATAATGTTTTATGCCACGATTT | 58.537 | 29.630 | 0.00 | 0.00 | 35.68 | 2.17 |
2027 | 2131 | 6.183360 | GCCCAGGATTTAACAGATCAAGTTAC | 60.183 | 42.308 | 9.49 | 1.34 | 31.67 | 2.50 |
2037 | 2141 | 2.795329 | ACTGTGCCCAGGATTTAACAG | 58.205 | 47.619 | 0.05 | 0.00 | 43.36 | 3.16 |
2047 | 2151 | 3.189285 | CAAACTTGAAAACTGTGCCCAG | 58.811 | 45.455 | 0.00 | 0.00 | 44.68 | 4.45 |
2052 | 2156 | 9.221775 | GTTCAGTATACAAACTTGAAAACTGTG | 57.778 | 33.333 | 5.50 | 0.00 | 36.64 | 3.66 |
2055 | 2159 | 7.636326 | CGGTTCAGTATACAAACTTGAAAACT | 58.364 | 34.615 | 16.23 | 0.00 | 0.00 | 2.66 |
2230 | 2595 | 3.322828 | GCAAATCCCACGGTAGTATAGGA | 59.677 | 47.826 | 0.00 | 0.00 | 0.00 | 2.94 |
2234 | 2599 | 2.504175 | ACTGCAAATCCCACGGTAGTAT | 59.496 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
2236 | 2601 | 0.690762 | ACTGCAAATCCCACGGTAGT | 59.309 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2241 | 2606 | 3.056891 | ACCAAATAACTGCAAATCCCACG | 60.057 | 43.478 | 0.00 | 0.00 | 0.00 | 4.94 |
2343 | 3326 | 8.188531 | CCAATTGGCACTAAACAAAATATGAG | 57.811 | 34.615 | 12.53 | 0.00 | 0.00 | 2.90 |
2417 | 3569 | 9.820725 | AAATTCAGAATTTTCATTGACTCACAA | 57.179 | 25.926 | 14.43 | 0.00 | 37.84 | 3.33 |
2594 | 3760 | 8.750515 | TGATATCTGATGAATTAGCAAAACCA | 57.249 | 30.769 | 3.98 | 0.00 | 0.00 | 3.67 |
2642 | 3808 | 2.930826 | AACAATATCTGGCCCCTACG | 57.069 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2670 | 3836 | 5.910637 | TGTCGTACAGGACAAATTACAAC | 57.089 | 39.130 | 2.43 | 0.00 | 43.55 | 3.32 |
2684 | 3850 | 0.033642 | TGATTTGCCCGTGTCGTACA | 59.966 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2685 | 3851 | 1.149987 | TTGATTTGCCCGTGTCGTAC | 58.850 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2686 | 3852 | 2.102070 | ATTGATTTGCCCGTGTCGTA | 57.898 | 45.000 | 0.00 | 0.00 | 0.00 | 3.43 |
2687 | 3853 | 2.006888 | CTATTGATTTGCCCGTGTCGT | 58.993 | 47.619 | 0.00 | 0.00 | 0.00 | 4.34 |
2688 | 3854 | 2.006888 | ACTATTGATTTGCCCGTGTCG | 58.993 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
2820 | 4011 | 9.706691 | CTTGTTGTAACTTATAAGACTTCCTCA | 57.293 | 33.333 | 19.38 | 7.04 | 0.00 | 3.86 |
2884 | 4282 | 1.817447 | GGAGCTGAGCTTTGAGCAATT | 59.183 | 47.619 | 9.00 | 0.00 | 45.56 | 2.32 |
2885 | 4283 | 1.461559 | GGAGCTGAGCTTTGAGCAAT | 58.538 | 50.000 | 9.00 | 0.00 | 45.56 | 3.56 |
2906 | 4304 | 1.064537 | TGCATAGCACATGTCCCACAT | 60.065 | 47.619 | 0.00 | 0.00 | 34.31 | 3.21 |
2958 | 4366 | 5.010282 | AGAAAAACCACACTCAAGACACTT | 58.990 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
2960 | 4368 | 4.662145 | CAGAAAAACCACACTCAAGACAC | 58.338 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
2961 | 4369 | 3.128589 | GCAGAAAAACCACACTCAAGACA | 59.871 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
2974 | 4389 | 0.315251 | GAGCTGGGGTGCAGAAAAAC | 59.685 | 55.000 | 0.00 | 0.00 | 34.99 | 2.43 |
2991 | 4406 | 2.363795 | TAGAGGGGGTGCACCGAG | 60.364 | 66.667 | 29.08 | 0.00 | 41.60 | 4.63 |
2992 | 4407 | 2.682494 | GTAGAGGGGGTGCACCGA | 60.682 | 66.667 | 29.08 | 7.41 | 41.60 | 4.69 |
2993 | 4408 | 3.000819 | TGTAGAGGGGGTGCACCG | 61.001 | 66.667 | 29.08 | 0.00 | 41.60 | 4.94 |
2994 | 4409 | 2.669240 | GTGTAGAGGGGGTGCACC | 59.331 | 66.667 | 28.57 | 28.57 | 39.11 | 5.01 |
2995 | 4410 | 2.669240 | GGTGTAGAGGGGGTGCAC | 59.331 | 66.667 | 8.80 | 8.80 | 0.00 | 4.57 |
2996 | 4411 | 2.609610 | GGGTGTAGAGGGGGTGCA | 60.610 | 66.667 | 0.00 | 0.00 | 0.00 | 4.57 |
2997 | 4412 | 2.609610 | TGGGTGTAGAGGGGGTGC | 60.610 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
2998 | 4413 | 2.656069 | CGTGGGTGTAGAGGGGGTG | 61.656 | 68.421 | 0.00 | 0.00 | 0.00 | 4.61 |
2999 | 4414 | 2.284405 | CGTGGGTGTAGAGGGGGT | 60.284 | 66.667 | 0.00 | 0.00 | 0.00 | 4.95 |
3000 | 4415 | 3.782443 | GCGTGGGTGTAGAGGGGG | 61.782 | 72.222 | 0.00 | 0.00 | 0.00 | 5.40 |
3001 | 4416 | 2.521958 | CTTGCGTGGGTGTAGAGGGG | 62.522 | 65.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3002 | 4417 | 1.079127 | CTTGCGTGGGTGTAGAGGG | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
3003 | 4418 | 0.320374 | TTCTTGCGTGGGTGTAGAGG | 59.680 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3004 | 4419 | 2.163818 | TTTCTTGCGTGGGTGTAGAG | 57.836 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
3005 | 4420 | 2.215196 | GTTTTCTTGCGTGGGTGTAGA | 58.785 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
3043 | 4458 | 8.885494 | TCATTCCCACAAACTTTTAGATTTTG | 57.115 | 30.769 | 0.00 | 0.00 | 36.49 | 2.44 |
3072 | 4487 | 4.261572 | GCAAGCCACTCTAACATTTGTTGA | 60.262 | 41.667 | 6.21 | 1.84 | 38.90 | 3.18 |
3073 | 4488 | 3.983344 | GCAAGCCACTCTAACATTTGTTG | 59.017 | 43.478 | 6.21 | 0.00 | 38.90 | 3.33 |
3074 | 4489 | 3.636300 | TGCAAGCCACTCTAACATTTGTT | 59.364 | 39.130 | 1.08 | 1.08 | 41.73 | 2.83 |
3088 | 4503 | 0.177604 | CCACCAAACTTTGCAAGCCA | 59.822 | 50.000 | 0.00 | 0.00 | 0.00 | 4.75 |
3148 | 4563 | 8.847196 | ACCAAGTCTAAAACCTTTTGAGTAATC | 58.153 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
3149 | 4564 | 8.762481 | ACCAAGTCTAAAACCTTTTGAGTAAT | 57.238 | 30.769 | 0.00 | 0.00 | 0.00 | 1.89 |
3150 | 4565 | 9.333724 | CTACCAAGTCTAAAACCTTTTGAGTAA | 57.666 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
3151 | 4566 | 8.707449 | TCTACCAAGTCTAAAACCTTTTGAGTA | 58.293 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
3172 | 4596 | 6.624423 | TCATGTACTCGGTTTTAGTTCTACC | 58.376 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3198 | 4624 | 3.367703 | GCCTAGTAGTACTGAAACCGCAA | 60.368 | 47.826 | 13.29 | 0.00 | 0.00 | 4.85 |
3274 | 4707 | 5.067273 | TGACCACAAATATCGAAAGGTGTT | 58.933 | 37.500 | 0.00 | 0.00 | 0.00 | 3.32 |
3292 | 4725 | 0.401356 | TCCTTCTGCAGCATTGACCA | 59.599 | 50.000 | 9.47 | 0.00 | 0.00 | 4.02 |
3341 | 4774 | 5.591472 | CACTTCATCCATCTGGCTTTGATTA | 59.409 | 40.000 | 0.00 | 0.00 | 34.44 | 1.75 |
3398 | 4831 | 2.485814 | CTCTTAGCTTTTGTGGCACTCC | 59.514 | 50.000 | 19.83 | 2.59 | 0.00 | 3.85 |
3417 | 4850 | 4.068599 | GCCATCCTATAAGAACTTGCCTC | 58.931 | 47.826 | 0.00 | 0.00 | 0.00 | 4.70 |
3429 | 4862 | 0.963962 | GGTCGAACCGCCATCCTATA | 59.036 | 55.000 | 0.00 | 0.00 | 0.00 | 1.31 |
3430 | 4863 | 1.746517 | GGTCGAACCGCCATCCTAT | 59.253 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
3431 | 4864 | 2.428925 | GGGTCGAACCGCCATCCTA | 61.429 | 63.158 | 2.28 | 0.00 | 39.83 | 2.94 |
3503 | 4939 | 0.392461 | GCATCTCCGCCACACCTAAA | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 1.85 |
3604 | 5041 | 4.356405 | TGGACAAGCTTCTCTTCATTCA | 57.644 | 40.909 | 0.00 | 0.00 | 31.27 | 2.57 |
3607 | 5044 | 4.090761 | TGTTGGACAAGCTTCTCTTCAT | 57.909 | 40.909 | 0.00 | 0.00 | 31.27 | 2.57 |
3663 | 5100 | 2.659016 | CACTGGCGCTTCTGGAGA | 59.341 | 61.111 | 7.64 | 0.00 | 0.00 | 3.71 |
3713 | 5151 | 1.391577 | GTCTACCCCGACCTCTCTTC | 58.608 | 60.000 | 0.00 | 0.00 | 0.00 | 2.87 |
3755 | 5193 | 7.735917 | TCCAGTCTTTCAGATCTTTCTTTACA | 58.264 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
3820 | 5258 | 0.752743 | TGGCACATGGATAGCAAGCC | 60.753 | 55.000 | 0.00 | 0.00 | 40.93 | 4.35 |
3869 | 5310 | 2.185387 | GGGTAGGCTAGAGGTGAAACA | 58.815 | 52.381 | 0.00 | 0.00 | 39.98 | 2.83 |
3902 | 5349 | 5.789521 | ACAACAACAACAAAGCCTTTAGTT | 58.210 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
4000 | 5456 | 4.698780 | TCAAATGACATCCAAGAAGCTCTG | 59.301 | 41.667 | 0.00 | 0.00 | 0.00 | 3.35 |
4010 | 5466 | 2.967745 | TGGTGGTCAAATGACATCCA | 57.032 | 45.000 | 18.29 | 18.29 | 46.47 | 3.41 |
4017 | 5473 | 5.177327 | GCTTGTAATGTTTGGTGGTCAAATG | 59.823 | 40.000 | 0.00 | 0.00 | 45.79 | 2.32 |
4023 | 5479 | 4.161377 | ACAAAGCTTGTAATGTTTGGTGGT | 59.839 | 37.500 | 0.00 | 0.00 | 43.27 | 4.16 |
4095 | 5561 | 1.944024 | CTACACCCACGCAAGAAAACA | 59.056 | 47.619 | 0.00 | 0.00 | 43.62 | 2.83 |
4332 | 5798 | 8.302965 | ATATACATAATATGCTAGCACATGCG | 57.697 | 34.615 | 22.07 | 8.72 | 36.39 | 4.73 |
4383 | 5853 | 9.573133 | CAAGAGAACCAAATAACCAACATATTC | 57.427 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
4404 | 5874 | 7.288672 | CGTTTAACTGGTAACTTTAGCAAGAG | 58.711 | 38.462 | 2.74 | 0.00 | 40.23 | 2.85 |
4467 | 6134 | 8.295288 | CAGATTCTCTTAATACCAAATCCATGC | 58.705 | 37.037 | 0.00 | 0.00 | 0.00 | 4.06 |
5104 | 6771 | 2.169561 | TGCCAATAGGTTGCGTGATCTA | 59.830 | 45.455 | 0.00 | 0.00 | 37.19 | 1.98 |
5279 | 6961 | 4.142160 | TGTCTAATCTCCACTGAACATCCG | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 4.18 |
5318 | 7018 | 9.981460 | ATCTTCTGACCCTATACAAAAATCTTT | 57.019 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
5365 | 7068 | 9.630098 | AATTTACATGAGTAAGAAACATGCTTG | 57.370 | 29.630 | 0.00 | 0.00 | 43.21 | 4.01 |
5510 | 7214 | 6.429078 | TGTTCCATCATGCTATCTGAAATAGC | 59.571 | 38.462 | 9.56 | 9.56 | 45.28 | 2.97 |
5511 | 7215 | 7.974482 | TGTTCCATCATGCTATCTGAAATAG | 57.026 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
5515 | 7219 | 5.687780 | ACATGTTCCATCATGCTATCTGAA | 58.312 | 37.500 | 0.00 | 0.00 | 46.15 | 3.02 |
5517 | 7221 | 6.183360 | ACAAACATGTTCCATCATGCTATCTG | 60.183 | 38.462 | 12.39 | 3.67 | 46.15 | 2.90 |
5518 | 7222 | 5.889853 | ACAAACATGTTCCATCATGCTATCT | 59.110 | 36.000 | 12.39 | 0.00 | 46.15 | 1.98 |
5519 | 7223 | 6.140303 | ACAAACATGTTCCATCATGCTATC | 57.860 | 37.500 | 12.39 | 0.00 | 46.15 | 2.08 |
5520 | 7224 | 6.534475 | AACAAACATGTTCCATCATGCTAT | 57.466 | 33.333 | 12.39 | 0.00 | 46.15 | 2.97 |
5521 | 7225 | 5.981088 | AACAAACATGTTCCATCATGCTA | 57.019 | 34.783 | 12.39 | 0.00 | 46.15 | 3.49 |
5522 | 7226 | 4.877378 | AACAAACATGTTCCATCATGCT | 57.123 | 36.364 | 12.39 | 0.00 | 46.15 | 3.79 |
5523 | 7227 | 4.751098 | ACAAACAAACATGTTCCATCATGC | 59.249 | 37.500 | 12.39 | 0.00 | 46.15 | 4.06 |
5525 | 7229 | 7.153985 | CCTTACAAACAAACATGTTCCATCAT | 58.846 | 34.615 | 12.39 | 0.00 | 0.00 | 2.45 |
5526 | 7230 | 6.097554 | ACCTTACAAACAAACATGTTCCATCA | 59.902 | 34.615 | 12.39 | 0.00 | 0.00 | 3.07 |
5527 | 7231 | 6.512297 | ACCTTACAAACAAACATGTTCCATC | 58.488 | 36.000 | 12.39 | 0.00 | 0.00 | 3.51 |
5528 | 7232 | 6.478512 | ACCTTACAAACAAACATGTTCCAT | 57.521 | 33.333 | 12.39 | 0.00 | 0.00 | 3.41 |
5529 | 7233 | 5.923733 | ACCTTACAAACAAACATGTTCCA | 57.076 | 34.783 | 12.39 | 0.00 | 0.00 | 3.53 |
5530 | 7234 | 5.910723 | CGTACCTTACAAACAAACATGTTCC | 59.089 | 40.000 | 12.39 | 0.00 | 0.00 | 3.62 |
5531 | 7235 | 5.910723 | CCGTACCTTACAAACAAACATGTTC | 59.089 | 40.000 | 12.39 | 0.00 | 0.00 | 3.18 |
5532 | 7236 | 5.221087 | CCCGTACCTTACAAACAAACATGTT | 60.221 | 40.000 | 4.92 | 4.92 | 0.00 | 2.71 |
5533 | 7237 | 4.276431 | CCCGTACCTTACAAACAAACATGT | 59.724 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
5534 | 7238 | 4.789784 | CCCGTACCTTACAAACAAACATG | 58.210 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
5535 | 7239 | 3.253921 | GCCCGTACCTTACAAACAAACAT | 59.746 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
5536 | 7240 | 2.617774 | GCCCGTACCTTACAAACAAACA | 59.382 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
5537 | 7241 | 2.030893 | GGCCCGTACCTTACAAACAAAC | 60.031 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
5538 | 7242 | 2.158638 | AGGCCCGTACCTTACAAACAAA | 60.159 | 45.455 | 0.00 | 0.00 | 36.28 | 2.83 |
5539 | 7243 | 1.420891 | AGGCCCGTACCTTACAAACAA | 59.579 | 47.619 | 0.00 | 0.00 | 36.28 | 2.83 |
5540 | 7244 | 1.058284 | AGGCCCGTACCTTACAAACA | 58.942 | 50.000 | 0.00 | 0.00 | 36.28 | 2.83 |
5541 | 7245 | 3.548745 | ATAGGCCCGTACCTTACAAAC | 57.451 | 47.619 | 0.00 | 0.00 | 41.50 | 2.93 |
5542 | 7246 | 3.430651 | CGAATAGGCCCGTACCTTACAAA | 60.431 | 47.826 | 0.00 | 0.00 | 41.50 | 2.83 |
5543 | 7247 | 2.101249 | CGAATAGGCCCGTACCTTACAA | 59.899 | 50.000 | 0.00 | 0.00 | 41.50 | 2.41 |
5544 | 7248 | 1.682854 | CGAATAGGCCCGTACCTTACA | 59.317 | 52.381 | 0.00 | 0.00 | 41.50 | 2.41 |
5545 | 7249 | 1.956477 | TCGAATAGGCCCGTACCTTAC | 59.044 | 52.381 | 0.00 | 0.00 | 41.50 | 2.34 |
5546 | 7250 | 2.363306 | TCGAATAGGCCCGTACCTTA | 57.637 | 50.000 | 0.00 | 0.00 | 41.50 | 2.69 |
5547 | 7251 | 1.713297 | ATCGAATAGGCCCGTACCTT | 58.287 | 50.000 | 0.00 | 0.00 | 41.50 | 3.50 |
5548 | 7252 | 1.617357 | GAATCGAATAGGCCCGTACCT | 59.383 | 52.381 | 0.00 | 0.00 | 44.31 | 3.08 |
5549 | 7253 | 1.342174 | TGAATCGAATAGGCCCGTACC | 59.658 | 52.381 | 0.00 | 0.00 | 0.00 | 3.34 |
5550 | 7254 | 2.806608 | TGAATCGAATAGGCCCGTAC | 57.193 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
5551 | 7255 | 2.036733 | CCTTGAATCGAATAGGCCCGTA | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
5565 | 7269 | 7.865820 | TCTTAACTCATCAGATTCCCTTGAAT | 58.134 | 34.615 | 0.00 | 0.00 | 43.91 | 2.57 |
5587 | 7291 | 7.965107 | GCTAAAAATCGTGAGACAATGATTCTT | 59.035 | 33.333 | 0.00 | 0.00 | 46.97 | 2.52 |
5588 | 7292 | 7.335422 | AGCTAAAAATCGTGAGACAATGATTCT | 59.665 | 33.333 | 0.00 | 0.00 | 46.97 | 2.40 |
5590 | 7294 | 7.335422 | AGAGCTAAAAATCGTGAGACAATGATT | 59.665 | 33.333 | 0.00 | 0.00 | 46.97 | 2.57 |
5592 | 7296 | 6.091305 | CAGAGCTAAAAATCGTGAGACAATGA | 59.909 | 38.462 | 0.00 | 0.00 | 46.97 | 2.57 |
5593 | 7297 | 6.246449 | CAGAGCTAAAAATCGTGAGACAATG | 58.754 | 40.000 | 0.00 | 0.00 | 46.97 | 2.82 |
5602 | 7307 | 5.063880 | ACAAACTCCAGAGCTAAAAATCGT | 58.936 | 37.500 | 0.00 | 0.00 | 0.00 | 3.73 |
5638 | 7343 | 5.290158 | CAGCAACAATTCATATGGTTTCAGC | 59.710 | 40.000 | 2.13 | 0.32 | 0.00 | 4.26 |
5676 | 7381 | 3.199880 | GCTCTGCCACTGTATATTGGT | 57.800 | 47.619 | 0.00 | 0.00 | 35.09 | 3.67 |
5721 | 7498 | 5.822204 | AGTCCAAGTGATAGTAGTCAGACT | 58.178 | 41.667 | 8.50 | 8.50 | 29.95 | 3.24 |
5726 | 7503 | 6.642707 | ATGCTAGTCCAAGTGATAGTAGTC | 57.357 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
5748 | 7527 | 3.568853 | GCTAGCTGATTCCATGAGCAAAT | 59.431 | 43.478 | 7.70 | 0.00 | 42.27 | 2.32 |
5802 | 7581 | 9.314321 | GAAATAATTCCATAAGAACAGACTCGA | 57.686 | 33.333 | 0.00 | 0.00 | 37.29 | 4.04 |
5866 | 7645 | 5.893897 | AGTGCAGGATTCATCTTTTCTTC | 57.106 | 39.130 | 0.00 | 0.00 | 0.00 | 2.87 |
5869 | 7648 | 5.893897 | AGAAGTGCAGGATTCATCTTTTC | 57.106 | 39.130 | 8.48 | 0.00 | 0.00 | 2.29 |
5874 | 7653 | 3.063180 | CGTGAAGAAGTGCAGGATTCATC | 59.937 | 47.826 | 8.48 | 6.73 | 32.93 | 2.92 |
5875 | 7654 | 3.005554 | CGTGAAGAAGTGCAGGATTCAT | 58.994 | 45.455 | 8.48 | 0.00 | 32.93 | 2.57 |
5876 | 7655 | 2.416747 | CGTGAAGAAGTGCAGGATTCA | 58.583 | 47.619 | 8.48 | 4.71 | 0.00 | 2.57 |
5877 | 7656 | 1.129437 | GCGTGAAGAAGTGCAGGATTC | 59.871 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
5878 | 7657 | 1.160137 | GCGTGAAGAAGTGCAGGATT | 58.840 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5880 | 7659 | 1.301716 | GGCGTGAAGAAGTGCAGGA | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
5881 | 7660 | 0.886490 | AAGGCGTGAAGAAGTGCAGG | 60.886 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
5883 | 7662 | 1.221466 | CGAAGGCGTGAAGAAGTGCA | 61.221 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
5884 | 7663 | 1.493311 | CGAAGGCGTGAAGAAGTGC | 59.507 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
5895 | 7674 | 1.278637 | GGTTGTCAACACGAAGGCG | 59.721 | 57.895 | 17.29 | 0.00 | 44.79 | 5.52 |
5896 | 7675 | 0.307760 | CTGGTTGTCAACACGAAGGC | 59.692 | 55.000 | 17.29 | 0.00 | 0.00 | 4.35 |
5897 | 7676 | 1.663695 | ACTGGTTGTCAACACGAAGG | 58.336 | 50.000 | 17.29 | 3.40 | 0.00 | 3.46 |
5898 | 7677 | 2.031683 | GGAACTGGTTGTCAACACGAAG | 59.968 | 50.000 | 17.29 | 10.69 | 0.00 | 3.79 |
5925 | 7712 | 2.552315 | CCTAACGGAGCAAGCAGAAAAA | 59.448 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
5926 | 7713 | 2.151202 | CCTAACGGAGCAAGCAGAAAA | 58.849 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
5930 | 7717 | 1.734465 | CTTTCCTAACGGAGCAAGCAG | 59.266 | 52.381 | 0.00 | 0.00 | 41.25 | 4.24 |
5980 | 7812 | 4.180057 | AGATTCAAACGATCAGCTGAGTC | 58.820 | 43.478 | 22.96 | 17.13 | 0.00 | 3.36 |
5984 | 7816 | 4.431809 | AGAGAGATTCAAACGATCAGCTG | 58.568 | 43.478 | 7.63 | 7.63 | 0.00 | 4.24 |
6020 | 7852 | 7.032580 | CGTATTCATATCTCCTTTAGAGCAGG | 58.967 | 42.308 | 0.00 | 0.00 | 42.90 | 4.85 |
6025 | 7857 | 7.152645 | GCCAACGTATTCATATCTCCTTTAGA | 58.847 | 38.462 | 0.00 | 0.00 | 39.02 | 2.10 |
6043 | 7875 | 2.032799 | CGTTATGCCATTATGCCAACGT | 59.967 | 45.455 | 10.12 | 0.00 | 40.66 | 3.99 |
6075 | 7907 | 4.033129 | CGTGGAAAAACGCTTCGGATATTA | 59.967 | 41.667 | 0.00 | 0.00 | 36.65 | 0.98 |
6101 | 7933 | 2.262471 | CTGCTGTTCTCGGCCATTGC | 62.262 | 60.000 | 2.24 | 0.00 | 44.62 | 3.56 |
6102 | 7934 | 0.674581 | TCTGCTGTTCTCGGCCATTG | 60.675 | 55.000 | 2.24 | 0.00 | 44.62 | 2.82 |
6103 | 7935 | 0.036732 | TTCTGCTGTTCTCGGCCATT | 59.963 | 50.000 | 2.24 | 0.00 | 44.62 | 3.16 |
6104 | 7936 | 0.392193 | CTTCTGCTGTTCTCGGCCAT | 60.392 | 55.000 | 2.24 | 0.00 | 44.62 | 4.40 |
6105 | 7937 | 1.004560 | CTTCTGCTGTTCTCGGCCA | 60.005 | 57.895 | 2.24 | 0.00 | 44.62 | 5.36 |
6106 | 7938 | 2.394563 | GCTTCTGCTGTTCTCGGCC | 61.395 | 63.158 | 0.00 | 0.00 | 44.62 | 6.13 |
6107 | 7939 | 1.023513 | ATGCTTCTGCTGTTCTCGGC | 61.024 | 55.000 | 0.00 | 0.00 | 45.37 | 5.54 |
6108 | 7940 | 0.725686 | CATGCTTCTGCTGTTCTCGG | 59.274 | 55.000 | 0.00 | 0.00 | 40.48 | 4.63 |
6109 | 7941 | 0.725686 | CCATGCTTCTGCTGTTCTCG | 59.274 | 55.000 | 0.00 | 0.00 | 40.48 | 4.04 |
6110 | 7942 | 0.450983 | GCCATGCTTCTGCTGTTCTC | 59.549 | 55.000 | 0.00 | 0.00 | 40.48 | 2.87 |
6111 | 7943 | 0.251033 | TGCCATGCTTCTGCTGTTCT | 60.251 | 50.000 | 0.00 | 0.00 | 40.48 | 3.01 |
6112 | 7944 | 0.599558 | TTGCCATGCTTCTGCTGTTC | 59.400 | 50.000 | 0.00 | 0.00 | 40.48 | 3.18 |
6113 | 7945 | 0.316204 | GTTGCCATGCTTCTGCTGTT | 59.684 | 50.000 | 0.00 | 0.00 | 40.48 | 3.16 |
6114 | 7946 | 0.538977 | AGTTGCCATGCTTCTGCTGT | 60.539 | 50.000 | 0.00 | 0.00 | 40.48 | 4.40 |
6115 | 7947 | 0.601558 | AAGTTGCCATGCTTCTGCTG | 59.398 | 50.000 | 0.00 | 0.00 | 40.48 | 4.41 |
6116 | 7948 | 1.335145 | AAAGTTGCCATGCTTCTGCT | 58.665 | 45.000 | 0.00 | 0.00 | 40.48 | 4.24 |
6117 | 7949 | 3.248266 | CTTAAAGTTGCCATGCTTCTGC | 58.752 | 45.455 | 0.00 | 0.00 | 40.20 | 4.26 |
6118 | 7950 | 3.057033 | AGCTTAAAGTTGCCATGCTTCTG | 60.057 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
6119 | 7951 | 3.160269 | AGCTTAAAGTTGCCATGCTTCT | 58.840 | 40.909 | 0.00 | 0.00 | 0.00 | 2.85 |
6120 | 7952 | 3.582714 | AGCTTAAAGTTGCCATGCTTC | 57.417 | 42.857 | 0.00 | 0.00 | 0.00 | 3.86 |
6121 | 7953 | 3.575687 | AGAAGCTTAAAGTTGCCATGCTT | 59.424 | 39.130 | 0.00 | 0.00 | 41.18 | 3.91 |
6122 | 7954 | 3.160269 | AGAAGCTTAAAGTTGCCATGCT | 58.840 | 40.909 | 0.00 | 0.00 | 0.00 | 3.79 |
6123 | 7955 | 3.505836 | GAGAAGCTTAAAGTTGCCATGC | 58.494 | 45.455 | 0.00 | 0.00 | 0.00 | 4.06 |
6124 | 7956 | 3.119352 | GGGAGAAGCTTAAAGTTGCCATG | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
6125 | 7957 | 3.092301 | GGGAGAAGCTTAAAGTTGCCAT | 58.908 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
6126 | 7958 | 2.108250 | AGGGAGAAGCTTAAAGTTGCCA | 59.892 | 45.455 | 0.00 | 0.00 | 0.00 | 4.92 |
6127 | 7959 | 2.796557 | AGGGAGAAGCTTAAAGTTGCC | 58.203 | 47.619 | 0.00 | 0.00 | 0.00 | 4.52 |
6128 | 7960 | 4.324267 | TGTAGGGAGAAGCTTAAAGTTGC | 58.676 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
6129 | 7961 | 5.181433 | GGTTGTAGGGAGAAGCTTAAAGTTG | 59.819 | 44.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6130 | 7962 | 5.073280 | AGGTTGTAGGGAGAAGCTTAAAGTT | 59.927 | 40.000 | 0.00 | 0.00 | 33.15 | 2.66 |
6131 | 7963 | 4.597940 | AGGTTGTAGGGAGAAGCTTAAAGT | 59.402 | 41.667 | 0.00 | 0.00 | 33.15 | 2.66 |
6132 | 7964 | 5.167303 | AGGTTGTAGGGAGAAGCTTAAAG | 57.833 | 43.478 | 0.00 | 0.00 | 33.15 | 1.85 |
6133 | 7965 | 6.442564 | TGATAGGTTGTAGGGAGAAGCTTAAA | 59.557 | 38.462 | 0.00 | 0.00 | 37.75 | 1.52 |
6134 | 7966 | 5.962031 | TGATAGGTTGTAGGGAGAAGCTTAA | 59.038 | 40.000 | 0.00 | 0.00 | 37.75 | 1.85 |
6135 | 7967 | 5.525484 | TGATAGGTTGTAGGGAGAAGCTTA | 58.475 | 41.667 | 0.00 | 0.00 | 37.75 | 3.09 |
6136 | 7968 | 4.362677 | TGATAGGTTGTAGGGAGAAGCTT | 58.637 | 43.478 | 0.00 | 0.00 | 37.75 | 3.74 |
6137 | 7969 | 3.995636 | TGATAGGTTGTAGGGAGAAGCT | 58.004 | 45.455 | 0.00 | 0.00 | 39.71 | 3.74 |
6138 | 7970 | 4.698575 | CTTGATAGGTTGTAGGGAGAAGC | 58.301 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
6139 | 7971 | 4.698575 | GCTTGATAGGTTGTAGGGAGAAG | 58.301 | 47.826 | 0.00 | 0.00 | 0.00 | 2.85 |
6140 | 7972 | 3.132289 | CGCTTGATAGGTTGTAGGGAGAA | 59.868 | 47.826 | 0.00 | 0.00 | 0.00 | 2.87 |
6141 | 7973 | 2.693591 | CGCTTGATAGGTTGTAGGGAGA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
6142 | 7974 | 2.693591 | TCGCTTGATAGGTTGTAGGGAG | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6143 | 7975 | 2.429610 | GTCGCTTGATAGGTTGTAGGGA | 59.570 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
6144 | 7976 | 2.167693 | TGTCGCTTGATAGGTTGTAGGG | 59.832 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
6145 | 7977 | 3.119101 | AGTGTCGCTTGATAGGTTGTAGG | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
6146 | 7978 | 4.111375 | AGTGTCGCTTGATAGGTTGTAG | 57.889 | 45.455 | 0.00 | 0.00 | 0.00 | 2.74 |
6147 | 7979 | 4.142315 | GGTAGTGTCGCTTGATAGGTTGTA | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 2.41 |
6148 | 7980 | 3.368116 | GGTAGTGTCGCTTGATAGGTTGT | 60.368 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
6149 | 7981 | 3.119101 | AGGTAGTGTCGCTTGATAGGTTG | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 3.77 |
6150 | 7982 | 3.097614 | AGGTAGTGTCGCTTGATAGGTT | 58.902 | 45.455 | 0.00 | 0.00 | 0.00 | 3.50 |
6151 | 7983 | 2.427453 | CAGGTAGTGTCGCTTGATAGGT | 59.573 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
6152 | 7984 | 2.799917 | GCAGGTAGTGTCGCTTGATAGG | 60.800 | 54.545 | 0.00 | 0.00 | 0.00 | 2.57 |
6153 | 7985 | 2.159240 | TGCAGGTAGTGTCGCTTGATAG | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 2.08 |
6154 | 7986 | 1.822371 | TGCAGGTAGTGTCGCTTGATA | 59.178 | 47.619 | 0.00 | 0.00 | 0.00 | 2.15 |
6155 | 7987 | 0.608130 | TGCAGGTAGTGTCGCTTGAT | 59.392 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
6156 | 7988 | 0.319555 | GTGCAGGTAGTGTCGCTTGA | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
6157 | 7989 | 0.599991 | TGTGCAGGTAGTGTCGCTTG | 60.600 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
6158 | 7990 | 0.600255 | GTGTGCAGGTAGTGTCGCTT | 60.600 | 55.000 | 0.00 | 0.00 | 0.00 | 4.68 |
6159 | 7991 | 1.006102 | GTGTGCAGGTAGTGTCGCT | 60.006 | 57.895 | 0.00 | 0.00 | 0.00 | 4.93 |
6160 | 7992 | 0.878523 | TTGTGTGCAGGTAGTGTCGC | 60.879 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
6161 | 7993 | 1.795768 | ATTGTGTGCAGGTAGTGTCG | 58.204 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.