Multiple sequence alignment - TraesCS7D01G334800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G334800 chr7D 100.000 7225 0 0 1 7225 426728674 426735898 0.000000e+00 13343.0
1 TraesCS7D01G334800 chr7D 91.165 249 22 0 1 249 381982661 381982909 8.980000e-89 339.0
2 TraesCS7D01G334800 chr7D 89.113 248 27 0 250 497 382081900 382081653 7.040000e-80 309.0
3 TraesCS7D01G334800 chr7A 93.881 5017 214 38 2 4996 506825006 506820061 0.000000e+00 7478.0
4 TraesCS7D01G334800 chr7A 91.548 1053 59 18 5796 6839 506819546 506818515 0.000000e+00 1424.0
5 TraesCS7D01G334800 chr7A 95.533 403 16 2 5153 5553 506820064 506819662 1.700000e-180 643.0
6 TraesCS7D01G334800 chr7A 81.452 124 8 9 5666 5774 506819670 506819547 3.590000e-13 87.9
7 TraesCS7D01G334800 chr7B 97.210 3513 53 14 2890 6372 443739288 443742785 0.000000e+00 5903.0
8 TraesCS7D01G334800 chr7B 98.606 1076 14 1 1815 2890 443737702 443738776 0.000000e+00 1903.0
9 TraesCS7D01G334800 chr7B 92.884 1054 42 16 789 1816 443736575 443737621 0.000000e+00 1500.0
10 TraesCS7D01G334800 chr7B 83.483 999 115 24 2542 3511 648244392 648243415 0.000000e+00 885.0
11 TraesCS7D01G334800 chr7B 82.885 409 49 10 2527 2917 648269781 648269376 1.490000e-91 348.0
12 TraesCS7D01G334800 chr7B 82.057 418 56 10 2516 2917 648162246 648161832 8.980000e-89 339.0
13 TraesCS7D01G334800 chr5D 91.566 249 21 0 1 249 562945147 562945395 1.930000e-90 344.0
14 TraesCS7D01G334800 chrUn 91.165 249 22 0 1 249 86493016 86492768 8.980000e-89 339.0
15 TraesCS7D01G334800 chrUn 91.165 249 22 0 1 249 186176449 186176697 8.980000e-89 339.0
16 TraesCS7D01G334800 chrUn 91.165 249 22 0 1 249 454371993 454372241 8.980000e-89 339.0
17 TraesCS7D01G334800 chr3D 91.165 249 22 0 1 249 154754597 154754845 8.980000e-89 339.0
18 TraesCS7D01G334800 chr3D 89.113 248 27 0 250 497 501870738 501870491 7.040000e-80 309.0
19 TraesCS7D01G334800 chr3D 92.529 174 12 1 4990 5163 87925996 87926168 1.560000e-61 248.0
20 TraesCS7D01G334800 chr2D 91.165 249 22 0 1 249 635054950 635054702 8.980000e-89 339.0
21 TraesCS7D01G334800 chr2D 94.512 164 9 0 4992 5155 299891717 299891554 3.350000e-63 254.0
22 TraesCS7D01G334800 chr1D 91.165 249 22 0 1 249 493806487 493806735 8.980000e-89 339.0
23 TraesCS7D01G334800 chr1A 91.165 249 22 0 1 249 94700031 94700279 8.980000e-89 339.0
24 TraesCS7D01G334800 chr1A 89.787 235 24 0 263 497 94572309 94572075 1.180000e-77 302.0
25 TraesCS7D01G334800 chr6B 89.113 248 27 0 250 497 596609762 596610009 7.040000e-80 309.0
26 TraesCS7D01G334800 chr6B 88.306 248 29 0 250 497 715999238 715999485 1.520000e-76 298.0
27 TraesCS7D01G334800 chr4D 89.113 248 27 0 250 497 414808512 414808265 7.040000e-80 309.0
28 TraesCS7D01G334800 chr4D 88.710 248 28 0 250 497 134955113 134954866 3.280000e-78 303.0
29 TraesCS7D01G334800 chr3A 89.212 241 24 2 259 499 209530998 209530760 4.240000e-77 300.0
30 TraesCS7D01G334800 chr3B 88.306 248 28 1 250 497 173915892 173915646 5.480000e-76 296.0
31 TraesCS7D01G334800 chr5A 95.062 162 8 0 4994 5155 320214244 320214405 9.300000e-64 255.0
32 TraesCS7D01G334800 chr2A 93.976 166 10 0 4990 5155 184561319 184561154 1.200000e-62 252.0
33 TraesCS7D01G334800 chr2A 93.939 165 10 0 4991 5155 419206980 419206816 4.330000e-62 250.0
34 TraesCS7D01G334800 chr5B 92.899 169 12 0 4987 5155 472754675 472754843 5.600000e-61 246.0
35 TraesCS7D01G334800 chr5B 91.061 179 14 2 4985 5162 70793551 70793374 2.600000e-59 241.0
36 TraesCS7D01G334800 chr2B 92.899 169 12 0 4990 5158 117888407 117888239 5.600000e-61 246.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G334800 chr7D 426728674 426735898 7224 False 13343.000 13343 100.000000 1 7225 1 chr7D.!!$F2 7224
1 TraesCS7D01G334800 chr7A 506818515 506825006 6491 True 2408.225 7478 90.603500 2 6839 4 chr7A.!!$R1 6837
2 TraesCS7D01G334800 chr7B 443736575 443742785 6210 False 3102.000 5903 96.233333 789 6372 3 chr7B.!!$F1 5583
3 TraesCS7D01G334800 chr7B 648243415 648244392 977 True 885.000 885 83.483000 2542 3511 1 chr7B.!!$R2 969

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
511 517 0.096976 GTGTGTGTGTGTGTGTGCTC 59.903 55.000 0.00 0.00 0.00 4.26 F
626 633 0.104672 TCTCACCTTCCCTTCCACCA 60.105 55.000 0.00 0.00 0.00 4.17 F
767 774 0.177141 TCGTCGGCCTTAGAAATGGG 59.823 55.000 0.00 0.00 0.00 4.00 F
1160 1190 0.815615 GAGAACCAATAGCCTGGCCG 60.816 60.000 16.57 1.27 40.45 6.13 F
1921 2045 1.210478 CAGTTGCTAGCCCCTACACAT 59.790 52.381 13.29 0.00 0.00 3.21 F
3130 3790 4.686091 GTGATGAAAGTTCTGATGACGACA 59.314 41.667 0.00 0.00 0.00 4.35 F
3715 4379 1.560860 GGACTGCACTGCTCGACAAC 61.561 60.000 1.98 0.00 0.00 3.32 F
4650 5316 3.737774 GCAGGCTGAAAAACTTTTAGCAG 59.262 43.478 20.86 10.86 32.98 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1885 2007 3.554324 GCAACTGTTACGAAACACAGAGA 59.446 43.478 6.32 0.00 42.74 3.10 R
1886 2008 3.555956 AGCAACTGTTACGAAACACAGAG 59.444 43.478 6.32 0.38 42.74 3.35 R
1965 2089 3.642848 ACAAGGACCAAACTTTCATGCAT 59.357 39.130 0.00 0.00 0.00 3.96 R
2503 2627 5.038033 GGTCTAGTGAAGTGAGATAAAGCG 58.962 45.833 0.00 0.00 0.00 4.68 R
3514 4178 3.132111 TCACAGGCCCAAAAGTTCTTTTC 59.868 43.478 0.00 0.00 0.00 2.29 R
4650 5316 1.931841 GTACGGGAAAGGAAGATTCGC 59.068 52.381 0.00 0.00 36.65 4.70 R
5553 6226 0.116342 AAATCCCCAAGTCAACCCCC 59.884 55.000 0.00 0.00 0.00 5.40 R
6519 7235 1.332178 CAGACGAGACGAGAAGCAAC 58.668 55.000 0.00 0.00 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.278669 TGACTCCCAAGAGCTATTATCGAC 59.721 45.833 0.00 0.00 44.65 4.20
26 27 3.253677 ACTCCCAAGAGCTATTATCGACG 59.746 47.826 0.00 0.00 44.65 5.12
63 64 4.574599 TCGATGTCGAATCATCACATCT 57.425 40.909 14.31 0.00 46.30 2.90
66 67 4.741676 CGATGTCGAATCATCACATCTTGA 59.258 41.667 14.31 0.00 42.82 3.02
82 83 3.318313 TCTTGAGGTTGAAGAAGGTCCT 58.682 45.455 0.00 0.00 0.00 3.85
90 91 2.547990 TGAAGAAGGTCCTAAGGGTCC 58.452 52.381 0.00 0.00 40.40 4.46
91 92 1.481363 GAAGAAGGTCCTAAGGGTCCG 59.519 57.143 0.00 0.00 43.92 4.79
98 99 0.978907 TCCTAAGGGTCCGGTTGTTC 59.021 55.000 0.00 0.00 0.00 3.18
99 100 0.688487 CCTAAGGGTCCGGTTGTTCA 59.312 55.000 0.00 0.00 0.00 3.18
101 102 1.346722 CTAAGGGTCCGGTTGTTCACT 59.653 52.381 0.00 0.00 0.00 3.41
102 103 0.108019 AAGGGTCCGGTTGTTCACTC 59.892 55.000 0.00 0.00 0.00 3.51
113 114 3.632145 GGTTGTTCACTCATGAAAGTGGT 59.368 43.478 13.44 0.00 46.40 4.16
137 138 3.460103 GTGAGTTGGGTTTAGAACGTCA 58.540 45.455 0.00 0.00 0.00 4.35
139 140 4.062293 TGAGTTGGGTTTAGAACGTCATG 58.938 43.478 0.00 0.00 0.00 3.07
144 145 3.322541 TGGGTTTAGAACGTCATGAGACA 59.677 43.478 0.00 0.00 45.23 3.41
148 149 5.118817 GGTTTAGAACGTCATGAGACAGTTC 59.881 44.000 18.11 18.11 46.45 3.01
149 150 3.305398 AGAACGTCATGAGACAGTTCC 57.695 47.619 20.36 9.87 46.80 3.62
154 155 2.338500 GTCATGAGACAGTTCCGTTCC 58.662 52.381 0.00 0.00 44.34 3.62
157 158 3.192844 TCATGAGACAGTTCCGTTCCTAC 59.807 47.826 0.00 0.00 0.00 3.18
158 159 1.891150 TGAGACAGTTCCGTTCCTACC 59.109 52.381 0.00 0.00 0.00 3.18
160 161 1.893801 AGACAGTTCCGTTCCTACCTG 59.106 52.381 0.00 0.00 0.00 4.00
161 162 1.617357 GACAGTTCCGTTCCTACCTGT 59.383 52.381 0.00 0.00 0.00 4.00
162 163 1.617357 ACAGTTCCGTTCCTACCTGTC 59.383 52.381 0.00 0.00 0.00 3.51
185 186 4.204799 GTTGGTGTTAAAGGGAGAACTGT 58.795 43.478 0.00 0.00 0.00 3.55
192 193 0.980423 AAGGGAGAACTGTGAGGAGC 59.020 55.000 0.00 0.00 0.00 4.70
204 205 2.565834 TGTGAGGAGCCAACCTTAGTAC 59.434 50.000 0.00 0.00 40.73 2.73
212 214 2.694109 GCCAACCTTAGTACGAGAGGAT 59.306 50.000 16.03 4.69 34.61 3.24
223 225 0.328258 CGAGAGGATTGGGTTGGGTT 59.672 55.000 0.00 0.00 0.00 4.11
255 257 6.042322 TGGTGTACCAGTTGTTATGACTTACT 59.958 38.462 0.00 0.00 42.01 2.24
256 258 6.932960 GGTGTACCAGTTGTTATGACTTACTT 59.067 38.462 0.00 0.00 35.64 2.24
261 263 7.959175 ACCAGTTGTTATGACTTACTTGAGTA 58.041 34.615 0.00 0.00 0.00 2.59
306 308 4.384940 AGCAAGGTCTCTTTCTTGACTTC 58.615 43.478 7.18 0.00 41.94 3.01
325 327 4.523943 ACTTCACTTGAATGCCATTTGCTA 59.476 37.500 0.00 0.00 42.00 3.49
328 330 4.766373 TCACTTGAATGCCATTTGCTAAGA 59.234 37.500 0.00 0.00 42.00 2.10
336 338 7.722728 TGAATGCCATTTGCTAAGATATCTTCT 59.277 33.333 21.17 1.47 42.00 2.85
340 342 8.408601 TGCCATTTGCTAAGATATCTTCTTTTC 58.591 33.333 21.17 8.00 40.45 2.29
351 353 9.771534 AAGATATCTTCTTTTCTCTTATTCCGG 57.228 33.333 12.37 0.00 42.15 5.14
353 355 4.181578 TCTTCTTTTCTCTTATTCCGGCG 58.818 43.478 0.00 0.00 0.00 6.46
357 359 4.630069 TCTTTTCTCTTATTCCGGCGAAAG 59.370 41.667 9.30 6.25 0.00 2.62
391 397 5.622770 ATTTTACGGAAGCAAGACGAAAT 57.377 34.783 0.00 0.00 0.00 2.17
431 437 5.045213 TGGGGAATAGTAGTGAAAGCAATCA 60.045 40.000 0.00 0.00 0.00 2.57
442 448 3.127548 TGAAAGCAATCAATCGGAGAAGC 59.872 43.478 0.00 0.00 43.58 3.86
497 503 0.179020 CCCCAGATGTGTGTGTGTGT 60.179 55.000 0.00 0.00 0.00 3.72
498 504 0.946528 CCCAGATGTGTGTGTGTGTG 59.053 55.000 0.00 0.00 0.00 3.82
499 505 1.667236 CCAGATGTGTGTGTGTGTGT 58.333 50.000 0.00 0.00 0.00 3.72
500 506 1.331447 CCAGATGTGTGTGTGTGTGTG 59.669 52.381 0.00 0.00 0.00 3.82
501 507 2.009051 CAGATGTGTGTGTGTGTGTGT 58.991 47.619 0.00 0.00 0.00 3.72
502 508 2.009051 AGATGTGTGTGTGTGTGTGTG 58.991 47.619 0.00 0.00 0.00 3.82
503 509 1.737236 GATGTGTGTGTGTGTGTGTGT 59.263 47.619 0.00 0.00 0.00 3.72
504 510 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
505 511 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
506 512 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
507 513 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
508 514 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
509 515 0.454285 GTGTGTGTGTGTGTGTGTGC 60.454 55.000 0.00 0.00 0.00 4.57
510 516 0.605050 TGTGTGTGTGTGTGTGTGCT 60.605 50.000 0.00 0.00 0.00 4.40
511 517 0.096976 GTGTGTGTGTGTGTGTGCTC 59.903 55.000 0.00 0.00 0.00 4.26
512 518 1.348250 GTGTGTGTGTGTGTGCTCG 59.652 57.895 0.00 0.00 0.00 5.03
513 519 2.324477 GTGTGTGTGTGTGCTCGC 59.676 61.111 0.00 0.00 0.00 5.03
514 520 3.261216 TGTGTGTGTGTGCTCGCG 61.261 61.111 0.00 0.00 0.00 5.87
526 532 2.509336 CTCGCGCTTTCCACGGAT 60.509 61.111 5.56 0.00 0.00 4.18
527 533 2.802667 CTCGCGCTTTCCACGGATG 61.803 63.158 5.56 0.00 0.00 3.51
545 551 5.046529 CGGATGTGATCTCGATTTCTTCTT 58.953 41.667 0.00 0.00 0.00 2.52
549 555 7.170658 GGATGTGATCTCGATTTCTTCTTAAGG 59.829 40.741 1.85 0.00 0.00 2.69
552 558 7.036220 GTGATCTCGATTTCTTCTTAAGGTGA 58.964 38.462 1.85 0.00 0.00 4.02
555 561 6.390721 TCTCGATTTCTTCTTAAGGTGACTG 58.609 40.000 1.85 0.00 42.68 3.51
557 563 4.093556 CGATTTCTTCTTAAGGTGACTGGC 59.906 45.833 1.85 0.00 42.68 4.85
558 564 4.431416 TTTCTTCTTAAGGTGACTGGCA 57.569 40.909 1.85 0.00 42.68 4.92
581 587 1.000394 GCCTCTCTTCTTATCCGCTCC 60.000 57.143 0.00 0.00 0.00 4.70
626 633 0.104672 TCTCACCTTCCCTTCCACCA 60.105 55.000 0.00 0.00 0.00 4.17
630 637 1.074951 CCTTCCCTTCCACCACCAC 59.925 63.158 0.00 0.00 0.00 4.16
634 641 2.757077 CCTTCCACCACCACCTCC 59.243 66.667 0.00 0.00 0.00 4.30
636 643 1.715019 CCTTCCACCACCACCTCCAA 61.715 60.000 0.00 0.00 0.00 3.53
644 651 1.256812 CACCACCTCCAAACCCATTC 58.743 55.000 0.00 0.00 0.00 2.67
649 656 2.003072 ACCTCCAAACCCATTCTCCAT 58.997 47.619 0.00 0.00 0.00 3.41
651 658 2.292267 CTCCAAACCCATTCTCCATCG 58.708 52.381 0.00 0.00 0.00 3.84
652 659 1.633432 TCCAAACCCATTCTCCATCGT 59.367 47.619 0.00 0.00 0.00 3.73
655 662 3.347216 CAAACCCATTCTCCATCGTCTT 58.653 45.455 0.00 0.00 0.00 3.01
662 669 0.895530 TCTCCATCGTCTTGTCCACC 59.104 55.000 0.00 0.00 0.00 4.61
667 674 1.825474 CATCGTCTTGTCCACCCTACT 59.175 52.381 0.00 0.00 0.00 2.57
669 676 1.616865 TCGTCTTGTCCACCCTACTTG 59.383 52.381 0.00 0.00 0.00 3.16
670 677 1.343465 CGTCTTGTCCACCCTACTTGT 59.657 52.381 0.00 0.00 0.00 3.16
672 679 3.139077 GTCTTGTCCACCCTACTTGTTG 58.861 50.000 0.00 0.00 0.00 3.33
673 680 2.775384 TCTTGTCCACCCTACTTGTTGT 59.225 45.455 0.00 0.00 0.00 3.32
674 681 2.631160 TGTCCACCCTACTTGTTGTG 57.369 50.000 0.00 0.00 0.00 3.33
677 684 1.493022 TCCACCCTACTTGTTGTGCTT 59.507 47.619 0.00 0.00 0.00 3.91
678 685 1.880027 CCACCCTACTTGTTGTGCTTC 59.120 52.381 0.00 0.00 0.00 3.86
679 686 2.487265 CCACCCTACTTGTTGTGCTTCT 60.487 50.000 0.00 0.00 0.00 2.85
680 687 3.214328 CACCCTACTTGTTGTGCTTCTT 58.786 45.455 0.00 0.00 0.00 2.52
681 688 3.251004 CACCCTACTTGTTGTGCTTCTTC 59.749 47.826 0.00 0.00 0.00 2.87
682 689 2.814336 CCCTACTTGTTGTGCTTCTTCC 59.186 50.000 0.00 0.00 0.00 3.46
683 690 2.480419 CCTACTTGTTGTGCTTCTTCCG 59.520 50.000 0.00 0.00 0.00 4.30
684 691 2.038387 ACTTGTTGTGCTTCTTCCGT 57.962 45.000 0.00 0.00 0.00 4.69
685 692 2.365582 ACTTGTTGTGCTTCTTCCGTT 58.634 42.857 0.00 0.00 0.00 4.44
686 693 2.354821 ACTTGTTGTGCTTCTTCCGTTC 59.645 45.455 0.00 0.00 0.00 3.95
687 694 1.305201 TGTTGTGCTTCTTCCGTTCC 58.695 50.000 0.00 0.00 0.00 3.62
688 695 1.305201 GTTGTGCTTCTTCCGTTCCA 58.695 50.000 0.00 0.00 0.00 3.53
689 696 1.880027 GTTGTGCTTCTTCCGTTCCAT 59.120 47.619 0.00 0.00 0.00 3.41
690 697 1.522668 TGTGCTTCTTCCGTTCCATG 58.477 50.000 0.00 0.00 0.00 3.66
691 698 1.071542 TGTGCTTCTTCCGTTCCATGA 59.928 47.619 0.00 0.00 0.00 3.07
692 699 1.464997 GTGCTTCTTCCGTTCCATGAC 59.535 52.381 0.00 0.00 0.00 3.06
693 700 1.087501 GCTTCTTCCGTTCCATGACC 58.912 55.000 0.00 0.00 0.00 4.02
694 701 1.610624 GCTTCTTCCGTTCCATGACCA 60.611 52.381 0.00 0.00 0.00 4.02
695 702 2.778299 CTTCTTCCGTTCCATGACCAA 58.222 47.619 0.00 0.00 0.00 3.67
732 739 0.746659 GCCAAACCCTATCACCATGC 59.253 55.000 0.00 0.00 0.00 4.06
741 748 1.072173 CTATCACCATGCCCGATCCAA 59.928 52.381 0.00 0.00 0.00 3.53
754 761 1.641577 GATCCAAACTTCCTCGTCGG 58.358 55.000 0.00 0.00 0.00 4.79
758 765 0.602905 CAAACTTCCTCGTCGGCCTT 60.603 55.000 0.00 0.00 0.00 4.35
763 770 1.203994 CTTCCTCGTCGGCCTTAGAAA 59.796 52.381 0.00 0.00 0.00 2.52
764 771 1.481871 TCCTCGTCGGCCTTAGAAAT 58.518 50.000 0.00 0.00 0.00 2.17
767 774 0.177141 TCGTCGGCCTTAGAAATGGG 59.823 55.000 0.00 0.00 0.00 4.00
769 776 1.202651 CGTCGGCCTTAGAAATGGGAT 60.203 52.381 0.00 0.00 0.00 3.85
771 780 3.288092 GTCGGCCTTAGAAATGGGATTT 58.712 45.455 0.00 0.00 34.64 2.17
772 781 3.699538 GTCGGCCTTAGAAATGGGATTTT 59.300 43.478 0.00 0.00 31.47 1.82
811 820 5.183014 AGAAAACAGGAAAGCCGTAAAAG 57.817 39.130 0.00 0.00 39.96 2.27
867 880 7.640240 CGTGAAGGAAAGAAGTAAACAGAAAAG 59.360 37.037 0.00 0.00 0.00 2.27
1009 1036 1.473434 CGTGGCATTACCCTCTTCTCC 60.473 57.143 0.00 0.00 37.83 3.71
1018 1045 1.074850 CCTCTTCTCCCCTCCTCCC 60.075 68.421 0.00 0.00 0.00 4.30
1041 1068 3.192922 CTAAACCTTCCGCCGCCG 61.193 66.667 0.00 0.00 0.00 6.46
1152 1182 1.571919 CCGAAGGCGAGAACCAATAG 58.428 55.000 0.00 0.00 46.14 1.73
1160 1190 0.815615 GAGAACCAATAGCCTGGCCG 60.816 60.000 16.57 1.27 40.45 6.13
1804 1844 5.373222 CCTTCGATGGTAATACATTTGGGA 58.627 41.667 9.17 0.00 0.00 4.37
1885 2007 6.610075 AATTGGGTCACTTATGCTGAATTT 57.390 33.333 0.00 0.00 0.00 1.82
1886 2008 5.643379 TTGGGTCACTTATGCTGAATTTC 57.357 39.130 0.00 0.00 0.00 2.17
1921 2045 1.210478 CAGTTGCTAGCCCCTACACAT 59.790 52.381 13.29 0.00 0.00 3.21
2005 2129 7.337942 GGTCCTTGTCATGACATTCTAAAGATT 59.662 37.037 28.32 0.00 41.52 2.40
2503 2627 7.923414 ATCTTGGAACTTAACAAGGTATGTC 57.077 36.000 0.00 0.00 42.99 3.06
3103 3763 9.565090 TGAATTCCATAAAAGATGGATCTAGTG 57.435 33.333 7.10 0.00 46.51 2.74
3130 3790 4.686091 GTGATGAAAGTTCTGATGACGACA 59.314 41.667 0.00 0.00 0.00 4.35
3212 3872 9.665264 GAAAGAAAAGATTCGTAAAGTGATTGT 57.335 29.630 0.00 0.00 40.63 2.71
3514 4178 3.960571 AGATTCAATGAAGGTGACAGGG 58.039 45.455 1.10 0.00 0.00 4.45
3639 4303 2.290367 CTGGTCAACATTTCGACAGCAA 59.710 45.455 0.00 0.00 33.66 3.91
3715 4379 1.560860 GGACTGCACTGCTCGACAAC 61.561 60.000 1.98 0.00 0.00 3.32
4316 4982 5.176741 AGCTGAGTTTGAGGATGAGAAAT 57.823 39.130 0.00 0.00 0.00 2.17
4318 4984 6.008960 AGCTGAGTTTGAGGATGAGAAATTT 58.991 36.000 0.00 0.00 0.00 1.82
4650 5316 3.737774 GCAGGCTGAAAAACTTTTAGCAG 59.262 43.478 20.86 10.86 32.98 4.24
4880 5546 6.273825 AGTTACAACTATTCATCCTACTGCG 58.726 40.000 0.00 0.00 37.52 5.18
5073 5744 6.092259 ACGGAGCAAAATAAGTGAATCTACAC 59.908 38.462 0.00 0.00 40.60 2.90
5166 5837 7.824779 GGAATGGAGGGAGTACATATATTTGAC 59.175 40.741 0.00 0.00 0.00 3.18
5297 5970 6.146837 CACTCTGACTTGGAAATCTTGTACAG 59.853 42.308 0.00 0.00 0.00 2.74
5466 6139 5.296283 CACTTATCCTCTCCTGAAGCATTTG 59.704 44.000 0.00 0.00 0.00 2.32
5477 6150 4.201910 CCTGAAGCATTTGTTACGGGTATG 60.202 45.833 0.00 0.00 0.00 2.39
5553 6226 2.417924 GCAGTATGGCCGATCTATGAGG 60.418 54.545 0.00 0.00 35.86 3.86
5816 6527 2.554032 GCATAGTGGCATGTGGGTTATC 59.446 50.000 0.00 0.00 0.00 1.75
5932 6645 8.523915 TCTTGAAGCAATAATGACCAATACAT 57.476 30.769 0.00 0.00 0.00 2.29
5997 6713 8.443953 AAGACATGCTTCTATGGTTCTAATTC 57.556 34.615 0.00 0.00 32.32 2.17
6275 6991 4.183865 GGTTTTCTTGCCATGGCTATTTC 58.816 43.478 35.53 19.05 42.51 2.17
6356 7072 1.548719 GCTATTGGAAGCGGGGTTTTT 59.451 47.619 0.00 0.00 31.76 1.94
6444 7160 3.692101 CAGGGCCGAAATATGTTTGTACA 59.308 43.478 0.00 0.00 38.95 2.90
6448 7164 3.371591 GCCGAAATATGTTTGTACACGGA 59.628 43.478 16.99 0.00 39.79 4.69
6472 7188 4.690122 AGTCGCAAGTTAGTGTAGTGTTT 58.310 39.130 0.00 0.00 39.48 2.83
6519 7235 2.986479 GCACAAAATTAAAGAGCACCGG 59.014 45.455 0.00 0.00 0.00 5.28
6554 7270 3.509967 TCGTCTGCTCCTAGATTCAACAA 59.490 43.478 0.00 0.00 0.00 2.83
6560 7276 5.482908 TGCTCCTAGATTCAACAAGTCTTC 58.517 41.667 0.00 0.00 0.00 2.87
6562 7278 5.073311 TCCTAGATTCAACAAGTCTTCCG 57.927 43.478 0.00 0.00 0.00 4.30
6564 7280 4.627467 CCTAGATTCAACAAGTCTTCCGTG 59.373 45.833 0.00 0.00 0.00 4.94
6568 7284 3.380479 TCAACAAGTCTTCCGTGGTAG 57.620 47.619 0.00 0.00 0.00 3.18
6584 7300 6.608405 TCCGTGGTAGGTATTCTCAAATCTTA 59.392 38.462 0.00 0.00 0.00 2.10
6689 7405 7.437862 TCAAAGTCTCACATTTGTTAAATTGGC 59.562 33.333 0.00 0.00 37.60 4.52
6690 7406 6.655078 AGTCTCACATTTGTTAAATTGGCT 57.345 33.333 0.00 0.00 0.00 4.75
6691 7407 7.054491 AGTCTCACATTTGTTAAATTGGCTT 57.946 32.000 0.00 0.00 0.00 4.35
6692 7408 7.147976 AGTCTCACATTTGTTAAATTGGCTTC 58.852 34.615 0.00 0.00 0.00 3.86
6694 7410 7.437862 GTCTCACATTTGTTAAATTGGCTTCAA 59.562 33.333 0.00 0.00 34.56 2.69
6695 7411 8.149647 TCTCACATTTGTTAAATTGGCTTCAAT 58.850 29.630 0.00 0.00 42.41 2.57
6696 7412 8.085720 TCACATTTGTTAAATTGGCTTCAATG 57.914 30.769 0.00 0.00 40.63 2.82
6697 7413 7.714377 TCACATTTGTTAAATTGGCTTCAATGT 59.286 29.630 0.00 0.00 40.63 2.71
6698 7414 7.799447 CACATTTGTTAAATTGGCTTCAATGTG 59.201 33.333 11.90 11.90 40.63 3.21
6701 7417 5.923204 TGTTAAATTGGCTTCAATGTGGTT 58.077 33.333 0.00 0.00 40.63 3.67
6702 7418 5.988561 TGTTAAATTGGCTTCAATGTGGTTC 59.011 36.000 0.00 0.00 40.63 3.62
6703 7419 4.686191 AAATTGGCTTCAATGTGGTTCA 57.314 36.364 0.00 0.00 40.63 3.18
6704 7420 4.895668 AATTGGCTTCAATGTGGTTCAT 57.104 36.364 0.00 0.00 40.63 2.57
6707 7423 3.229293 TGGCTTCAATGTGGTTCATCAA 58.771 40.909 0.00 0.00 35.48 2.57
6708 7424 3.640498 TGGCTTCAATGTGGTTCATCAAA 59.360 39.130 0.00 0.00 35.48 2.69
6709 7425 3.989817 GGCTTCAATGTGGTTCATCAAAC 59.010 43.478 0.00 0.00 35.48 2.93
6742 7458 2.758009 TCGGTCCGAAACACTTTTAGG 58.242 47.619 12.68 0.00 38.51 2.69
6746 7462 2.483106 GTCCGAAACACTTTTAGGCCTC 59.517 50.000 9.68 0.00 37.40 4.70
6747 7463 2.105134 TCCGAAACACTTTTAGGCCTCA 59.895 45.455 9.68 0.00 37.40 3.86
6773 7490 2.110578 GCAACCCATTTAGGCCAGATT 58.889 47.619 5.01 0.00 35.39 2.40
6774 7491 2.159057 GCAACCCATTTAGGCCAGATTG 60.159 50.000 5.01 0.00 35.39 2.67
6795 7512 2.575461 GTACGTTAGCCACCGCCT 59.425 61.111 0.00 0.00 34.57 5.52
6800 7517 1.595357 GTTAGCCACCGCCTAGTGT 59.405 57.895 0.00 0.00 35.93 3.55
6804 7521 2.126071 CCACCGCCTAGTGTCGTG 60.126 66.667 0.00 0.00 35.93 4.35
6805 7522 2.649034 CACCGCCTAGTGTCGTGT 59.351 61.111 0.00 0.00 32.89 4.49
6807 7524 0.599204 CACCGCCTAGTGTCGTGTTT 60.599 55.000 0.00 0.00 32.89 2.83
6811 7528 1.862201 CGCCTAGTGTCGTGTTTTGAA 59.138 47.619 0.00 0.00 0.00 2.69
6814 7531 3.184581 GCCTAGTGTCGTGTTTTGAAGAG 59.815 47.826 0.00 0.00 0.00 2.85
6815 7532 3.184581 CCTAGTGTCGTGTTTTGAAGAGC 59.815 47.826 0.00 0.00 0.00 4.09
6821 7538 4.213270 TGTCGTGTTTTGAAGAGCCTATTG 59.787 41.667 0.00 0.00 0.00 1.90
6836 7553 2.878406 CCTATTGTGGATACCAAAGCCG 59.122 50.000 0.00 0.00 34.18 5.52
6839 7556 2.119029 GTGGATACCAAAGCCGCCC 61.119 63.158 0.00 0.00 34.18 6.13
6840 7557 2.900337 GGATACCAAAGCCGCCCG 60.900 66.667 0.00 0.00 0.00 6.13
6841 7558 2.188469 GATACCAAAGCCGCCCGA 59.812 61.111 0.00 0.00 0.00 5.14
6842 7559 2.124860 ATACCAAAGCCGCCCGAC 60.125 61.111 0.00 0.00 0.00 4.79
6843 7560 4.745751 TACCAAAGCCGCCCGACG 62.746 66.667 0.00 0.00 43.15 5.12
6845 7562 4.745751 CCAAAGCCGCCCGACGTA 62.746 66.667 0.00 0.00 41.42 3.57
6846 7563 3.484547 CAAAGCCGCCCGACGTAC 61.485 66.667 0.00 0.00 41.42 3.67
6847 7564 4.747529 AAAGCCGCCCGACGTACC 62.748 66.667 0.00 0.00 41.42 3.34
6853 7570 2.759560 GCCCGACGTACCCCCTAA 60.760 66.667 0.00 0.00 0.00 2.69
6854 7571 2.358372 GCCCGACGTACCCCCTAAA 61.358 63.158 0.00 0.00 0.00 1.85
6855 7572 1.517361 CCCGACGTACCCCCTAAAC 59.483 63.158 0.00 0.00 0.00 2.01
6856 7573 1.517361 CCGACGTACCCCCTAAACC 59.483 63.158 0.00 0.00 0.00 3.27
6857 7574 0.972471 CCGACGTACCCCCTAAACCT 60.972 60.000 0.00 0.00 0.00 3.50
6858 7575 0.897621 CGACGTACCCCCTAAACCTT 59.102 55.000 0.00 0.00 0.00 3.50
6859 7576 2.099405 CGACGTACCCCCTAAACCTTA 58.901 52.381 0.00 0.00 0.00 2.69
6860 7577 2.695147 CGACGTACCCCCTAAACCTTAT 59.305 50.000 0.00 0.00 0.00 1.73
6861 7578 3.491447 CGACGTACCCCCTAAACCTTATG 60.491 52.174 0.00 0.00 0.00 1.90
6862 7579 2.171237 ACGTACCCCCTAAACCTTATGC 59.829 50.000 0.00 0.00 0.00 3.14
6863 7580 2.436911 CGTACCCCCTAAACCTTATGCT 59.563 50.000 0.00 0.00 0.00 3.79
6864 7581 3.118149 CGTACCCCCTAAACCTTATGCTT 60.118 47.826 0.00 0.00 0.00 3.91
6865 7582 4.101430 CGTACCCCCTAAACCTTATGCTTA 59.899 45.833 0.00 0.00 0.00 3.09
6866 7583 5.396660 CGTACCCCCTAAACCTTATGCTTAA 60.397 44.000 0.00 0.00 0.00 1.85
6867 7584 5.125367 ACCCCCTAAACCTTATGCTTAAG 57.875 43.478 11.49 11.49 35.55 1.85
6868 7585 3.889538 CCCCCTAAACCTTATGCTTAAGC 59.110 47.826 20.84 20.84 42.50 3.09
6880 7597 2.031258 GCTTAAGCACTTCTCTCCCC 57.969 55.000 22.59 0.00 41.59 4.81
6881 7598 1.557371 GCTTAAGCACTTCTCTCCCCT 59.443 52.381 22.59 0.00 41.59 4.79
6882 7599 2.419436 GCTTAAGCACTTCTCTCCCCTC 60.419 54.545 22.59 0.00 41.59 4.30
6883 7600 1.867363 TAAGCACTTCTCTCCCCTCC 58.133 55.000 0.00 0.00 0.00 4.30
6884 7601 0.118144 AAGCACTTCTCTCCCCTCCT 59.882 55.000 0.00 0.00 0.00 3.69
6885 7602 1.011595 AGCACTTCTCTCCCCTCCTA 58.988 55.000 0.00 0.00 0.00 2.94
6886 7603 1.362932 AGCACTTCTCTCCCCTCCTAA 59.637 52.381 0.00 0.00 0.00 2.69
6887 7604 2.188817 GCACTTCTCTCCCCTCCTAAA 58.811 52.381 0.00 0.00 0.00 1.85
6888 7605 2.169561 GCACTTCTCTCCCCTCCTAAAG 59.830 54.545 0.00 0.00 0.00 1.85
6889 7606 3.714144 CACTTCTCTCCCCTCCTAAAGA 58.286 50.000 0.00 0.00 0.00 2.52
6890 7607 3.449377 CACTTCTCTCCCCTCCTAAAGAC 59.551 52.174 0.00 0.00 0.00 3.01
6891 7608 2.438800 TCTCTCCCCTCCTAAAGACG 57.561 55.000 0.00 0.00 0.00 4.18
6892 7609 1.639628 TCTCTCCCCTCCTAAAGACGT 59.360 52.381 0.00 0.00 0.00 4.34
6893 7610 2.042706 TCTCTCCCCTCCTAAAGACGTT 59.957 50.000 0.00 0.00 0.00 3.99
6894 7611 2.427812 CTCTCCCCTCCTAAAGACGTTC 59.572 54.545 0.00 0.00 0.00 3.95
6895 7612 2.042706 TCTCCCCTCCTAAAGACGTTCT 59.957 50.000 0.00 0.00 0.00 3.01
6896 7613 2.427812 CTCCCCTCCTAAAGACGTTCTC 59.572 54.545 0.00 0.00 0.00 2.87
6897 7614 2.176889 CCCCTCCTAAAGACGTTCTCA 58.823 52.381 0.00 0.00 0.00 3.27
6898 7615 2.094130 CCCCTCCTAAAGACGTTCTCAC 60.094 54.545 0.00 0.00 0.00 3.51
6899 7616 2.094130 CCCTCCTAAAGACGTTCTCACC 60.094 54.545 0.00 0.00 0.00 4.02
6900 7617 2.561419 CCTCCTAAAGACGTTCTCACCA 59.439 50.000 0.00 0.00 0.00 4.17
6901 7618 3.576648 CTCCTAAAGACGTTCTCACCAC 58.423 50.000 0.00 0.00 0.00 4.16
6902 7619 2.960384 TCCTAAAGACGTTCTCACCACA 59.040 45.455 0.00 0.00 0.00 4.17
6903 7620 3.057734 CCTAAAGACGTTCTCACCACAC 58.942 50.000 0.00 0.00 0.00 3.82
6904 7621 1.949465 AAAGACGTTCTCACCACACC 58.051 50.000 0.00 0.00 0.00 4.16
6905 7622 0.249322 AAGACGTTCTCACCACACCG 60.249 55.000 0.00 0.00 0.00 4.94
6906 7623 2.279918 ACGTTCTCACCACACCGC 60.280 61.111 0.00 0.00 0.00 5.68
6907 7624 2.029073 CGTTCTCACCACACCGCT 59.971 61.111 0.00 0.00 0.00 5.52
6908 7625 1.594293 CGTTCTCACCACACCGCTT 60.594 57.895 0.00 0.00 0.00 4.68
6909 7626 1.157870 CGTTCTCACCACACCGCTTT 61.158 55.000 0.00 0.00 0.00 3.51
6910 7627 1.021968 GTTCTCACCACACCGCTTTT 58.978 50.000 0.00 0.00 0.00 2.27
6911 7628 1.021202 TTCTCACCACACCGCTTTTG 58.979 50.000 0.00 0.00 0.00 2.44
6912 7629 0.179234 TCTCACCACACCGCTTTTGA 59.821 50.000 0.00 0.00 0.00 2.69
6913 7630 0.307760 CTCACCACACCGCTTTTGAC 59.692 55.000 0.00 0.00 0.00 3.18
6914 7631 1.098712 TCACCACACCGCTTTTGACC 61.099 55.000 0.00 0.00 0.00 4.02
6915 7632 2.184167 ACCACACCGCTTTTGACCG 61.184 57.895 0.00 0.00 0.00 4.79
6916 7633 2.184167 CCACACCGCTTTTGACCGT 61.184 57.895 0.00 0.00 0.00 4.83
6917 7634 1.278637 CACACCGCTTTTGACCGTC 59.721 57.895 0.00 0.00 0.00 4.79
6918 7635 1.145377 ACACCGCTTTTGACCGTCT 59.855 52.632 0.00 0.00 0.00 4.18
6919 7636 0.878961 ACACCGCTTTTGACCGTCTC 60.879 55.000 0.00 0.00 0.00 3.36
6920 7637 1.301479 ACCGCTTTTGACCGTCTCC 60.301 57.895 0.00 0.00 0.00 3.71
6921 7638 2.033194 CCGCTTTTGACCGTCTCCC 61.033 63.158 0.00 0.00 0.00 4.30
6922 7639 1.004918 CGCTTTTGACCGTCTCCCT 60.005 57.895 0.00 0.00 0.00 4.20
6923 7640 1.291877 CGCTTTTGACCGTCTCCCTG 61.292 60.000 0.00 0.00 0.00 4.45
6924 7641 1.578206 GCTTTTGACCGTCTCCCTGC 61.578 60.000 0.00 0.00 0.00 4.85
6925 7642 0.250295 CTTTTGACCGTCTCCCTGCA 60.250 55.000 0.00 0.00 0.00 4.41
6926 7643 0.400213 TTTTGACCGTCTCCCTGCAT 59.600 50.000 0.00 0.00 0.00 3.96
6927 7644 0.321564 TTTGACCGTCTCCCTGCATG 60.322 55.000 0.00 0.00 0.00 4.06
6928 7645 2.184020 TTGACCGTCTCCCTGCATGG 62.184 60.000 0.78 0.78 0.00 3.66
6940 7657 3.077484 CCTGCATGGGAAAGAAGAAGA 57.923 47.619 0.00 0.00 0.00 2.87
6941 7658 3.629087 CCTGCATGGGAAAGAAGAAGAT 58.371 45.455 0.00 0.00 0.00 2.40
6942 7659 3.631227 CCTGCATGGGAAAGAAGAAGATC 59.369 47.826 0.00 0.00 0.00 2.75
6943 7660 3.273434 TGCATGGGAAAGAAGAAGATCG 58.727 45.455 0.00 0.00 0.00 3.69
6944 7661 3.274288 GCATGGGAAAGAAGAAGATCGT 58.726 45.455 0.00 0.00 0.00 3.73
6945 7662 3.311048 GCATGGGAAAGAAGAAGATCGTC 59.689 47.826 0.00 0.00 0.00 4.20
6946 7663 4.764172 CATGGGAAAGAAGAAGATCGTCT 58.236 43.478 5.23 5.23 36.80 4.18
6947 7664 4.457834 TGGGAAAGAAGAAGATCGTCTC 57.542 45.455 11.75 5.93 34.18 3.36
6948 7665 3.195825 TGGGAAAGAAGAAGATCGTCTCC 59.804 47.826 11.75 8.26 34.18 3.71
6949 7666 3.431068 GGGAAAGAAGAAGATCGTCTCCC 60.431 52.174 11.75 13.25 34.18 4.30
6950 7667 3.449377 GGAAAGAAGAAGATCGTCTCCCT 59.551 47.826 11.75 9.21 34.18 4.20
6951 7668 4.429108 GAAAGAAGAAGATCGTCTCCCTG 58.571 47.826 11.75 0.00 34.18 4.45
6952 7669 1.754226 AGAAGAAGATCGTCTCCCTGC 59.246 52.381 11.75 0.53 29.23 4.85
6953 7670 1.478510 GAAGAAGATCGTCTCCCTGCA 59.521 52.381 11.75 0.00 0.00 4.41
6954 7671 1.786937 AGAAGATCGTCTCCCTGCAT 58.213 50.000 5.23 0.00 0.00 3.96
6955 7672 1.411977 AGAAGATCGTCTCCCTGCATG 59.588 52.381 5.23 0.00 0.00 4.06
6956 7673 0.467384 AAGATCGTCTCCCTGCATGG 59.533 55.000 0.78 0.78 0.00 3.66
6968 7685 3.077484 CCTGCATGGGAAAGAAGAAGA 57.923 47.619 0.00 0.00 0.00 2.87
6969 7686 3.629087 CCTGCATGGGAAAGAAGAAGAT 58.371 45.455 0.00 0.00 0.00 2.40
6970 7687 3.380637 CCTGCATGGGAAAGAAGAAGATG 59.619 47.826 0.00 0.00 0.00 2.90
6971 7688 2.756760 TGCATGGGAAAGAAGAAGATGC 59.243 45.455 0.00 0.00 36.19 3.91
6972 7689 3.022406 GCATGGGAAAGAAGAAGATGCT 58.978 45.455 0.00 0.00 33.51 3.79
6973 7690 3.181489 GCATGGGAAAGAAGAAGATGCTG 60.181 47.826 0.00 0.00 33.51 4.41
6974 7691 4.267536 CATGGGAAAGAAGAAGATGCTGA 58.732 43.478 0.00 0.00 0.00 4.26
6975 7692 4.371624 TGGGAAAGAAGAAGATGCTGAA 57.628 40.909 0.00 0.00 0.00 3.02
6976 7693 4.330250 TGGGAAAGAAGAAGATGCTGAAG 58.670 43.478 0.00 0.00 0.00 3.02
6977 7694 3.693578 GGGAAAGAAGAAGATGCTGAAGG 59.306 47.826 0.00 0.00 0.00 3.46
6978 7695 4.566488 GGGAAAGAAGAAGATGCTGAAGGA 60.566 45.833 0.00 0.00 0.00 3.36
6979 7696 4.635324 GGAAAGAAGAAGATGCTGAAGGAG 59.365 45.833 0.00 0.00 0.00 3.69
6980 7697 3.910568 AGAAGAAGATGCTGAAGGAGG 57.089 47.619 0.00 0.00 0.00 4.30
6981 7698 2.093021 AGAAGAAGATGCTGAAGGAGGC 60.093 50.000 0.00 0.00 0.00 4.70
6982 7699 1.582389 AGAAGATGCTGAAGGAGGCT 58.418 50.000 0.00 0.00 0.00 4.58
6983 7700 1.914798 AGAAGATGCTGAAGGAGGCTT 59.085 47.619 0.00 0.00 0.00 4.35
6984 7701 2.015587 GAAGATGCTGAAGGAGGCTTG 58.984 52.381 0.00 0.00 0.00 4.01
6985 7702 1.283347 AGATGCTGAAGGAGGCTTGA 58.717 50.000 0.00 0.00 0.00 3.02
6986 7703 1.632409 AGATGCTGAAGGAGGCTTGAA 59.368 47.619 0.00 0.00 0.00 2.69
6987 7704 2.241685 AGATGCTGAAGGAGGCTTGAAT 59.758 45.455 0.00 0.00 0.00 2.57
6988 7705 2.119801 TGCTGAAGGAGGCTTGAATC 57.880 50.000 0.00 0.00 0.00 2.52
6989 7706 1.340405 TGCTGAAGGAGGCTTGAATCC 60.340 52.381 0.00 0.00 35.71 3.01
6990 7707 1.661341 CTGAAGGAGGCTTGAATCCG 58.339 55.000 0.00 0.00 40.73 4.18
6991 7708 1.208052 CTGAAGGAGGCTTGAATCCGA 59.792 52.381 0.00 0.00 40.73 4.55
6992 7709 1.839994 TGAAGGAGGCTTGAATCCGAT 59.160 47.619 0.00 0.00 40.73 4.18
6993 7710 2.216898 GAAGGAGGCTTGAATCCGATG 58.783 52.381 0.00 0.00 40.73 3.84
6994 7711 1.500474 AGGAGGCTTGAATCCGATGA 58.500 50.000 0.00 0.00 40.73 2.92
6995 7712 2.053244 AGGAGGCTTGAATCCGATGAT 58.947 47.619 0.00 0.00 40.73 2.45
6996 7713 2.149578 GGAGGCTTGAATCCGATGATG 58.850 52.381 0.00 0.00 0.00 3.07
6997 7714 2.486191 GGAGGCTTGAATCCGATGATGT 60.486 50.000 0.00 0.00 0.00 3.06
6998 7715 2.547211 GAGGCTTGAATCCGATGATGTG 59.453 50.000 0.00 0.00 0.00 3.21
6999 7716 1.605710 GGCTTGAATCCGATGATGTGG 59.394 52.381 0.00 0.00 0.00 4.17
7000 7717 1.605710 GCTTGAATCCGATGATGTGGG 59.394 52.381 0.00 0.00 0.00 4.61
7001 7718 2.923121 CTTGAATCCGATGATGTGGGT 58.077 47.619 0.00 0.00 0.00 4.51
7002 7719 3.744214 GCTTGAATCCGATGATGTGGGTA 60.744 47.826 0.00 0.00 0.00 3.69
7003 7720 3.469008 TGAATCCGATGATGTGGGTAC 57.531 47.619 0.00 0.00 0.00 3.34
7016 7733 3.001406 GGTACCCCTCCAGCGTGT 61.001 66.667 0.00 0.00 0.00 4.49
7017 7734 2.590114 GGTACCCCTCCAGCGTGTT 61.590 63.158 0.00 0.00 0.00 3.32
7018 7735 1.375523 GTACCCCTCCAGCGTGTTG 60.376 63.158 0.00 0.00 0.00 3.33
7019 7736 3.248446 TACCCCTCCAGCGTGTTGC 62.248 63.158 0.00 0.00 46.98 4.17
7030 7747 3.357079 GTGTTGCCACCTCGCCAG 61.357 66.667 0.00 0.00 35.44 4.85
7031 7748 4.641645 TGTTGCCACCTCGCCAGG 62.642 66.667 0.00 0.00 46.87 4.45
7039 7756 3.905678 CCTCGCCAGGTAGCTCGG 61.906 72.222 0.00 4.95 34.60 4.63
7040 7757 3.905678 CTCGCCAGGTAGCTCGGG 61.906 72.222 10.94 5.15 0.00 5.14
7059 7776 3.361174 TCGTGGCGAGACACATCA 58.639 55.556 9.95 0.00 41.38 3.07
7060 7777 1.890174 TCGTGGCGAGACACATCAT 59.110 52.632 9.95 0.00 41.38 2.45
7061 7778 0.179137 TCGTGGCGAGACACATCATC 60.179 55.000 9.95 0.00 41.38 2.92
7062 7779 1.474648 CGTGGCGAGACACATCATCG 61.475 60.000 9.95 0.00 41.38 3.84
7065 7782 4.812814 CGAGACACATCATCGCCA 57.187 55.556 0.00 0.00 0.00 5.69
7066 7783 2.291843 CGAGACACATCATCGCCAC 58.708 57.895 0.00 0.00 0.00 5.01
7067 7784 0.458370 CGAGACACATCATCGCCACA 60.458 55.000 0.00 0.00 0.00 4.17
7068 7785 1.803998 CGAGACACATCATCGCCACAT 60.804 52.381 0.00 0.00 0.00 3.21
7069 7786 2.283298 GAGACACATCATCGCCACATT 58.717 47.619 0.00 0.00 0.00 2.71
7070 7787 2.283298 AGACACATCATCGCCACATTC 58.717 47.619 0.00 0.00 0.00 2.67
7071 7788 1.331756 GACACATCATCGCCACATTCC 59.668 52.381 0.00 0.00 0.00 3.01
7072 7789 1.339920 ACACATCATCGCCACATTCCA 60.340 47.619 0.00 0.00 0.00 3.53
7073 7790 1.951602 CACATCATCGCCACATTCCAT 59.048 47.619 0.00 0.00 0.00 3.41
7074 7791 2.031420 CACATCATCGCCACATTCCATC 60.031 50.000 0.00 0.00 0.00 3.51
7075 7792 1.538512 CATCATCGCCACATTCCATCC 59.461 52.381 0.00 0.00 0.00 3.51
7076 7793 0.839277 TCATCGCCACATTCCATCCT 59.161 50.000 0.00 0.00 0.00 3.24
7077 7794 0.949397 CATCGCCACATTCCATCCTG 59.051 55.000 0.00 0.00 0.00 3.86
7078 7795 0.839277 ATCGCCACATTCCATCCTGA 59.161 50.000 0.00 0.00 0.00 3.86
7079 7796 0.107703 TCGCCACATTCCATCCTGAC 60.108 55.000 0.00 0.00 0.00 3.51
7080 7797 0.107508 CGCCACATTCCATCCTGACT 60.108 55.000 0.00 0.00 0.00 3.41
7081 7798 1.138859 CGCCACATTCCATCCTGACTA 59.861 52.381 0.00 0.00 0.00 2.59
7082 7799 2.419990 CGCCACATTCCATCCTGACTAA 60.420 50.000 0.00 0.00 0.00 2.24
7083 7800 3.745480 CGCCACATTCCATCCTGACTAAT 60.745 47.826 0.00 0.00 0.00 1.73
7084 7801 3.567164 GCCACATTCCATCCTGACTAATG 59.433 47.826 0.00 0.00 34.48 1.90
7085 7802 4.785301 CCACATTCCATCCTGACTAATGT 58.215 43.478 0.00 0.00 40.44 2.71
7086 7803 5.746307 CACATTCCATCCTGACTAATGTG 57.254 43.478 10.90 10.90 46.19 3.21
7087 7804 4.036027 CACATTCCATCCTGACTAATGTGC 59.964 45.833 12.03 0.00 45.86 4.57
7088 7805 3.281727 TTCCATCCTGACTAATGTGCC 57.718 47.619 0.00 0.00 0.00 5.01
7089 7806 2.481441 TCCATCCTGACTAATGTGCCT 58.519 47.619 0.00 0.00 0.00 4.75
7090 7807 2.435805 TCCATCCTGACTAATGTGCCTC 59.564 50.000 0.00 0.00 0.00 4.70
7091 7808 2.477825 CATCCTGACTAATGTGCCTCG 58.522 52.381 0.00 0.00 0.00 4.63
7092 7809 0.175760 TCCTGACTAATGTGCCTCGC 59.824 55.000 0.00 0.00 0.00 5.03
7093 7810 0.811616 CCTGACTAATGTGCCTCGCC 60.812 60.000 0.00 0.00 0.00 5.54
7094 7811 1.148157 CTGACTAATGTGCCTCGCCG 61.148 60.000 0.00 0.00 0.00 6.46
7095 7812 1.883084 GACTAATGTGCCTCGCCGG 60.883 63.158 0.00 0.00 0.00 6.13
7119 7836 4.353437 ACGTCGTGCCCGTCTTCC 62.353 66.667 0.00 0.00 31.97 3.46
7120 7837 4.052229 CGTCGTGCCCGTCTTCCT 62.052 66.667 0.00 0.00 35.01 3.36
7121 7838 2.126031 GTCGTGCCCGTCTTCCTC 60.126 66.667 0.00 0.00 35.01 3.71
7122 7839 3.379445 TCGTGCCCGTCTTCCTCC 61.379 66.667 0.00 0.00 35.01 4.30
7123 7840 3.691342 CGTGCCCGTCTTCCTCCA 61.691 66.667 0.00 0.00 0.00 3.86
7124 7841 2.990479 GTGCCCGTCTTCCTCCAT 59.010 61.111 0.00 0.00 0.00 3.41
7125 7842 1.153349 GTGCCCGTCTTCCTCCATC 60.153 63.158 0.00 0.00 0.00 3.51
7126 7843 1.612146 TGCCCGTCTTCCTCCATCA 60.612 57.895 0.00 0.00 0.00 3.07
7127 7844 0.982852 TGCCCGTCTTCCTCCATCAT 60.983 55.000 0.00 0.00 0.00 2.45
7128 7845 0.533755 GCCCGTCTTCCTCCATCATG 60.534 60.000 0.00 0.00 0.00 3.07
7129 7846 1.123077 CCCGTCTTCCTCCATCATGA 58.877 55.000 0.00 0.00 0.00 3.07
7130 7847 1.486310 CCCGTCTTCCTCCATCATGAA 59.514 52.381 0.00 0.00 0.00 2.57
7131 7848 2.484417 CCCGTCTTCCTCCATCATGAAG 60.484 54.545 0.00 0.00 37.44 3.02
7132 7849 2.169352 CCGTCTTCCTCCATCATGAAGT 59.831 50.000 0.00 0.00 37.39 3.01
7133 7850 3.193263 CGTCTTCCTCCATCATGAAGTG 58.807 50.000 0.00 0.00 37.39 3.16
7134 7851 3.539604 GTCTTCCTCCATCATGAAGTGG 58.460 50.000 8.81 8.81 37.39 4.00
7135 7852 2.507058 TCTTCCTCCATCATGAAGTGGG 59.493 50.000 14.11 7.57 37.39 4.61
7136 7853 2.268796 TCCTCCATCATGAAGTGGGA 57.731 50.000 14.11 10.88 36.15 4.37
7137 7854 2.121948 TCCTCCATCATGAAGTGGGAG 58.878 52.381 20.64 20.64 43.76 4.30
7138 7855 1.476471 CCTCCATCATGAAGTGGGAGC 60.476 57.143 21.54 0.00 42.99 4.70
7139 7856 0.548031 TCCATCATGAAGTGGGAGCC 59.452 55.000 14.11 0.00 36.15 4.70
7140 7857 0.466922 CCATCATGAAGTGGGAGCCC 60.467 60.000 7.38 0.00 0.00 5.19
7141 7858 0.549950 CATCATGAAGTGGGAGCCCT 59.450 55.000 7.16 0.00 36.94 5.19
7142 7859 0.842635 ATCATGAAGTGGGAGCCCTC 59.157 55.000 7.16 3.11 36.94 4.30
7152 7869 2.835895 GAGCCCTCCTCCGACCTC 60.836 72.222 0.00 0.00 34.35 3.85
7153 7870 4.467107 AGCCCTCCTCCGACCTCC 62.467 72.222 0.00 0.00 0.00 4.30
7155 7872 4.124943 CCCTCCTCCGACCTCCGA 62.125 72.222 0.00 0.00 41.76 4.55
7156 7873 2.196229 CCTCCTCCGACCTCCGAT 59.804 66.667 0.00 0.00 41.76 4.18
7157 7874 2.196925 CCTCCTCCGACCTCCGATG 61.197 68.421 0.00 0.00 41.76 3.84
7158 7875 1.152943 CTCCTCCGACCTCCGATGA 60.153 63.158 0.00 0.00 41.76 2.92
7159 7876 1.448922 CTCCTCCGACCTCCGATGAC 61.449 65.000 0.00 0.00 41.76 3.06
7160 7877 1.753078 CCTCCGACCTCCGATGACA 60.753 63.158 0.00 0.00 41.76 3.58
7161 7878 1.109920 CCTCCGACCTCCGATGACAT 61.110 60.000 0.00 0.00 41.76 3.06
7162 7879 0.312416 CTCCGACCTCCGATGACATC 59.688 60.000 5.28 5.28 41.76 3.06
7173 7890 1.517242 GATGACATCGATTGGGAGGC 58.483 55.000 0.00 0.00 0.00 4.70
7174 7891 0.839277 ATGACATCGATTGGGAGGCA 59.161 50.000 0.00 0.00 0.00 4.75
7175 7892 0.178767 TGACATCGATTGGGAGGCAG 59.821 55.000 0.00 0.00 0.00 4.85
7176 7893 1.153086 ACATCGATTGGGAGGCAGC 60.153 57.895 0.00 0.00 0.00 5.25
7177 7894 2.109799 ATCGATTGGGAGGCAGCG 59.890 61.111 0.00 0.00 0.00 5.18
7178 7895 3.466791 ATCGATTGGGAGGCAGCGG 62.467 63.158 0.00 0.00 0.00 5.52
7179 7896 4.473520 CGATTGGGAGGCAGCGGT 62.474 66.667 0.00 0.00 0.00 5.68
7180 7897 2.825836 GATTGGGAGGCAGCGGTG 60.826 66.667 10.98 10.98 0.00 4.94
7181 7898 3.329542 GATTGGGAGGCAGCGGTGA 62.330 63.158 20.69 0.00 0.00 4.02
7182 7899 3.628646 ATTGGGAGGCAGCGGTGAC 62.629 63.158 20.69 17.47 0.00 3.67
7202 7919 2.750237 GGTCATCAACCGCCCACC 60.750 66.667 0.00 0.00 38.58 4.61
7203 7920 2.033448 GTCATCAACCGCCCACCA 59.967 61.111 0.00 0.00 0.00 4.17
7204 7921 2.033448 TCATCAACCGCCCACCAC 59.967 61.111 0.00 0.00 0.00 4.16
7205 7922 2.282110 CATCAACCGCCCACCACA 60.282 61.111 0.00 0.00 0.00 4.17
7206 7923 2.282180 ATCAACCGCCCACCACAC 60.282 61.111 0.00 0.00 0.00 3.82
7207 7924 2.829384 ATCAACCGCCCACCACACT 61.829 57.895 0.00 0.00 0.00 3.55
7208 7925 3.286751 CAACCGCCCACCACACTG 61.287 66.667 0.00 0.00 0.00 3.66
7211 7928 4.015406 CCGCCCACCACACTGCTA 62.015 66.667 0.00 0.00 0.00 3.49
7212 7929 2.268920 CGCCCACCACACTGCTAT 59.731 61.111 0.00 0.00 0.00 2.97
7213 7930 1.815421 CGCCCACCACACTGCTATC 60.815 63.158 0.00 0.00 0.00 2.08
7214 7931 1.815421 GCCCACCACACTGCTATCG 60.815 63.158 0.00 0.00 0.00 2.92
7215 7932 1.897423 CCCACCACACTGCTATCGA 59.103 57.895 0.00 0.00 0.00 3.59
7216 7933 0.460284 CCCACCACACTGCTATCGAC 60.460 60.000 0.00 0.00 0.00 4.20
7217 7934 0.460284 CCACCACACTGCTATCGACC 60.460 60.000 0.00 0.00 0.00 4.79
7218 7935 0.246360 CACCACACTGCTATCGACCA 59.754 55.000 0.00 0.00 0.00 4.02
7219 7936 0.246635 ACCACACTGCTATCGACCAC 59.753 55.000 0.00 0.00 0.00 4.16
7220 7937 0.460284 CCACACTGCTATCGACCACC 60.460 60.000 0.00 0.00 0.00 4.61
7221 7938 0.532573 CACACTGCTATCGACCACCT 59.467 55.000 0.00 0.00 0.00 4.00
7222 7939 0.818296 ACACTGCTATCGACCACCTC 59.182 55.000 0.00 0.00 0.00 3.85
7223 7940 0.103208 CACTGCTATCGACCACCTCC 59.897 60.000 0.00 0.00 0.00 4.30
7224 7941 1.043673 ACTGCTATCGACCACCTCCC 61.044 60.000 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.184096 TCGATAATAGCTCTTGGGAGTCATC 59.816 44.000 0.00 0.00 41.38 2.92
25 26 3.343788 GAGGTGCCAGACGACTCCG 62.344 68.421 0.00 0.00 42.50 4.63
26 27 2.574399 GAGGTGCCAGACGACTCC 59.426 66.667 0.00 0.00 0.00 3.85
31 32 1.517257 GACATCGAGGTGCCAGACG 60.517 63.158 7.79 0.00 0.00 4.18
52 53 6.058553 TCTTCAACCTCAAGATGTGATGAT 57.941 37.500 0.00 0.00 35.07 2.45
63 64 4.041691 CCTTAGGACCTTCTTCAACCTCAA 59.958 45.833 0.00 0.00 32.90 3.02
66 67 2.913617 CCCTTAGGACCTTCTTCAACCT 59.086 50.000 0.00 0.00 33.47 3.50
82 83 1.345415 GAGTGAACAACCGGACCCTTA 59.655 52.381 9.46 0.00 0.00 2.69
98 99 3.649073 TCACGTACCACTTTCATGAGTG 58.351 45.455 7.88 7.88 45.19 3.51
99 100 3.321111 ACTCACGTACCACTTTCATGAGT 59.679 43.478 0.00 0.00 40.26 3.41
101 102 4.055360 CAACTCACGTACCACTTTCATGA 58.945 43.478 0.00 0.00 0.00 3.07
102 103 3.186409 CCAACTCACGTACCACTTTCATG 59.814 47.826 0.00 0.00 0.00 3.07
113 114 3.068024 ACGTTCTAAACCCAACTCACGTA 59.932 43.478 0.00 0.00 37.83 3.57
137 138 2.496470 GGTAGGAACGGAACTGTCTCAT 59.504 50.000 0.00 0.00 0.00 2.90
139 140 2.094649 CAGGTAGGAACGGAACTGTCTC 60.095 54.545 0.00 0.00 30.84 3.36
144 145 0.886563 CGACAGGTAGGAACGGAACT 59.113 55.000 0.00 0.00 0.00 3.01
148 149 0.389426 CCAACGACAGGTAGGAACGG 60.389 60.000 0.00 0.00 0.00 4.44
149 150 0.316204 ACCAACGACAGGTAGGAACG 59.684 55.000 0.00 0.00 37.67 3.95
154 155 3.744426 CCTTTAACACCAACGACAGGTAG 59.256 47.826 0.00 0.00 37.23 3.18
157 158 1.877443 CCCTTTAACACCAACGACAGG 59.123 52.381 0.00 0.00 0.00 4.00
158 159 2.806244 CTCCCTTTAACACCAACGACAG 59.194 50.000 0.00 0.00 0.00 3.51
160 161 3.116079 TCTCCCTTTAACACCAACGAC 57.884 47.619 0.00 0.00 0.00 4.34
161 162 3.135167 AGTTCTCCCTTTAACACCAACGA 59.865 43.478 0.00 0.00 0.00 3.85
162 163 3.250040 CAGTTCTCCCTTTAACACCAACG 59.750 47.826 0.00 0.00 0.00 4.10
185 186 1.822990 CGTACTAAGGTTGGCTCCTCA 59.177 52.381 2.66 0.00 36.74 3.86
192 193 4.441634 CCAATCCTCTCGTACTAAGGTTGG 60.442 50.000 15.97 15.97 36.22 3.77
204 205 0.328258 AACCCAACCCAATCCTCTCG 59.672 55.000 0.00 0.00 0.00 4.04
223 225 5.829062 AACAACTGGTACACCATAGGTTA 57.171 39.130 0.60 0.00 46.46 2.85
237 239 8.827177 TTACTCAAGTAAGTCATAACAACTGG 57.173 34.615 0.00 0.00 35.75 4.00
274 276 9.832533 AAGAAAGAGACCTTGCTTTCGCATAGA 62.833 40.741 0.00 0.00 44.05 1.98
291 293 6.017605 GCATTCAAGTGAAGTCAAGAAAGAGA 60.018 38.462 0.00 0.00 37.48 3.10
328 330 6.647067 CGCCGGAATAAGAGAAAAGAAGATAT 59.353 38.462 5.05 0.00 0.00 1.63
336 338 3.126343 GCTTTCGCCGGAATAAGAGAAAA 59.874 43.478 5.05 0.00 30.88 2.29
340 342 1.327764 GTGCTTTCGCCGGAATAAGAG 59.672 52.381 5.05 0.00 34.43 2.85
345 347 0.887933 AAATGTGCTTTCGCCGGAAT 59.112 45.000 5.05 0.00 34.43 3.01
349 351 1.981254 AATGAAATGTGCTTTCGCCG 58.019 45.000 0.00 0.00 45.24 6.46
351 353 7.104264 CGTAAAATAATGAAATGTGCTTTCGC 58.896 34.615 0.00 0.00 45.24 4.70
353 355 8.682128 TCCGTAAAATAATGAAATGTGCTTTC 57.318 30.769 0.00 0.00 43.05 2.62
357 359 6.529829 TGCTTCCGTAAAATAATGAAATGTGC 59.470 34.615 0.00 0.00 0.00 4.57
365 367 6.102006 TCGTCTTGCTTCCGTAAAATAATG 57.898 37.500 0.00 0.00 0.00 1.90
375 377 1.798223 TGACATTTCGTCTTGCTTCCG 59.202 47.619 0.00 0.00 45.60 4.30
391 397 2.092158 TCCCCATATTGGCGAAATGACA 60.092 45.455 0.00 0.00 35.79 3.58
406 412 5.450818 TTGCTTTCACTACTATTCCCCAT 57.549 39.130 0.00 0.00 0.00 4.00
411 417 7.224753 TCCGATTGATTGCTTTCACTACTATTC 59.775 37.037 0.00 0.00 0.00 1.75
417 423 5.084818 TCTCCGATTGATTGCTTTCACTA 57.915 39.130 0.00 0.00 0.00 2.74
420 426 3.127548 GCTTCTCCGATTGATTGCTTTCA 59.872 43.478 0.00 0.00 0.00 2.69
476 482 1.067295 ACACACACACATCTGGGGAT 58.933 50.000 0.00 0.00 0.00 3.85
479 485 0.946528 CACACACACACACATCTGGG 59.053 55.000 0.00 0.00 0.00 4.45
484 490 1.468127 CACACACACACACACACACAT 59.532 47.619 0.00 0.00 0.00 3.21
485 491 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
487 493 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
497 503 3.261216 CGCGAGCACACACACACA 61.261 61.111 0.00 0.00 0.00 3.72
509 515 2.509336 ATCCGTGGAAAGCGCGAG 60.509 61.111 12.10 0.00 0.00 5.03
510 516 2.813474 CATCCGTGGAAAGCGCGA 60.813 61.111 12.10 0.00 0.00 5.87
511 517 3.118454 ACATCCGTGGAAAGCGCG 61.118 61.111 0.00 0.00 0.00 6.86
512 518 1.369091 ATCACATCCGTGGAAAGCGC 61.369 55.000 0.00 0.00 43.79 5.92
513 519 0.652592 GATCACATCCGTGGAAAGCG 59.347 55.000 0.00 0.00 43.79 4.68
514 520 1.936547 GAGATCACATCCGTGGAAAGC 59.063 52.381 0.00 0.00 43.79 3.51
525 531 7.493971 CACCTTAAGAAGAAATCGAGATCACAT 59.506 37.037 3.36 0.00 0.00 3.21
526 532 6.813649 CACCTTAAGAAGAAATCGAGATCACA 59.186 38.462 3.36 0.00 0.00 3.58
527 533 7.009723 GTCACCTTAAGAAGAAATCGAGATCAC 59.990 40.741 3.36 0.00 0.00 3.06
536 542 4.985538 TGCCAGTCACCTTAAGAAGAAAT 58.014 39.130 3.36 0.00 0.00 2.17
557 563 2.288152 GCGGATAAGAAGAGAGGCTCTG 60.288 54.545 24.21 4.18 40.28 3.35
558 564 1.960689 GCGGATAAGAAGAGAGGCTCT 59.039 52.381 18.80 18.80 43.37 4.09
581 587 1.227205 GATGAGAGGCAGGTCGCAG 60.227 63.158 0.00 0.00 45.17 5.18
585 591 1.412343 GGAGAAGATGAGAGGCAGGTC 59.588 57.143 0.00 0.00 0.00 3.85
586 592 1.008206 AGGAGAAGATGAGAGGCAGGT 59.992 52.381 0.00 0.00 0.00 4.00
626 633 1.075536 GAGAATGGGTTTGGAGGTGGT 59.924 52.381 0.00 0.00 0.00 4.16
630 637 2.659428 GATGGAGAATGGGTTTGGAGG 58.341 52.381 0.00 0.00 0.00 4.30
634 641 2.991250 AGACGATGGAGAATGGGTTTG 58.009 47.619 0.00 0.00 0.00 2.93
636 643 2.305927 ACAAGACGATGGAGAATGGGTT 59.694 45.455 0.00 0.00 0.00 4.11
644 651 0.108138 GGGTGGACAAGACGATGGAG 60.108 60.000 0.00 0.00 0.00 3.86
649 656 1.616865 CAAGTAGGGTGGACAAGACGA 59.383 52.381 0.00 0.00 0.00 4.20
651 658 3.139077 CAACAAGTAGGGTGGACAAGAC 58.861 50.000 0.00 0.00 0.00 3.01
652 659 2.775384 ACAACAAGTAGGGTGGACAAGA 59.225 45.455 0.00 0.00 0.00 3.02
655 662 1.476110 GCACAACAAGTAGGGTGGACA 60.476 52.381 0.00 0.00 0.00 4.02
662 669 2.480419 CGGAAGAAGCACAACAAGTAGG 59.520 50.000 0.00 0.00 0.00 3.18
667 674 1.673920 GGAACGGAAGAAGCACAACAA 59.326 47.619 0.00 0.00 0.00 2.83
669 676 1.305201 TGGAACGGAAGAAGCACAAC 58.695 50.000 0.00 0.00 0.00 3.32
670 677 1.879380 CATGGAACGGAAGAAGCACAA 59.121 47.619 0.00 0.00 0.00 3.33
672 679 1.464997 GTCATGGAACGGAAGAAGCAC 59.535 52.381 0.00 0.00 0.00 4.40
673 680 1.610624 GGTCATGGAACGGAAGAAGCA 60.611 52.381 0.00 0.00 0.00 3.91
674 681 1.087501 GGTCATGGAACGGAAGAAGC 58.912 55.000 0.00 0.00 0.00 3.86
677 684 1.610624 GCTTGGTCATGGAACGGAAGA 60.611 52.381 0.00 0.00 0.00 2.87
678 685 0.804989 GCTTGGTCATGGAACGGAAG 59.195 55.000 0.00 0.00 0.00 3.46
679 686 0.400213 AGCTTGGTCATGGAACGGAA 59.600 50.000 0.00 0.00 0.00 4.30
680 687 0.400213 AAGCTTGGTCATGGAACGGA 59.600 50.000 0.00 0.00 0.00 4.69
681 688 0.804989 GAAGCTTGGTCATGGAACGG 59.195 55.000 2.10 0.00 0.00 4.44
682 689 0.804989 GGAAGCTTGGTCATGGAACG 59.195 55.000 2.10 0.00 0.00 3.95
683 690 1.177401 GGGAAGCTTGGTCATGGAAC 58.823 55.000 2.10 0.00 0.00 3.62
684 691 1.075601 AGGGAAGCTTGGTCATGGAA 58.924 50.000 2.10 0.00 0.00 3.53
685 692 1.559682 GTAGGGAAGCTTGGTCATGGA 59.440 52.381 2.10 0.00 0.00 3.41
686 693 1.561542 AGTAGGGAAGCTTGGTCATGG 59.438 52.381 2.10 0.00 0.00 3.66
687 694 2.503356 AGAGTAGGGAAGCTTGGTCATG 59.497 50.000 2.10 0.00 0.00 3.07
688 695 2.839228 AGAGTAGGGAAGCTTGGTCAT 58.161 47.619 2.10 0.00 0.00 3.06
689 696 2.327325 AGAGTAGGGAAGCTTGGTCA 57.673 50.000 2.10 0.00 0.00 4.02
690 697 2.835156 AGAAGAGTAGGGAAGCTTGGTC 59.165 50.000 2.10 0.00 0.00 4.02
691 698 2.909217 AGAAGAGTAGGGAAGCTTGGT 58.091 47.619 2.10 0.00 0.00 3.67
692 699 3.181470 GCTAGAAGAGTAGGGAAGCTTGG 60.181 52.174 2.10 0.00 0.00 3.61
693 700 3.181470 GGCTAGAAGAGTAGGGAAGCTTG 60.181 52.174 2.10 0.00 0.00 4.01
694 701 3.035363 GGCTAGAAGAGTAGGGAAGCTT 58.965 50.000 0.00 0.00 0.00 3.74
695 702 2.023888 TGGCTAGAAGAGTAGGGAAGCT 60.024 50.000 0.00 0.00 0.00 3.74
732 739 0.249398 ACGAGGAAGTTTGGATCGGG 59.751 55.000 0.00 0.00 37.69 5.14
741 748 0.531200 CTAAGGCCGACGAGGAAGTT 59.469 55.000 0.00 0.00 45.00 2.66
780 789 6.143919 CGGCTTTCCTGTTTTCTTGTAATTTC 59.856 38.462 0.00 0.00 0.00 2.17
783 792 4.583073 ACGGCTTTCCTGTTTTCTTGTAAT 59.417 37.500 0.00 0.00 0.00 1.89
786 795 2.375146 ACGGCTTTCCTGTTTTCTTGT 58.625 42.857 0.00 0.00 0.00 3.16
856 869 8.608844 TTTTGCCAGTTTTTCTTTTCTGTTTA 57.391 26.923 0.00 0.00 0.00 2.01
867 880 4.116238 TGTTCCGATTTTGCCAGTTTTTC 58.884 39.130 0.00 0.00 0.00 2.29
997 1024 0.935194 GAGGAGGGGAGAAGAGGGTA 59.065 60.000 0.00 0.00 0.00 3.69
998 1025 1.707200 GAGGAGGGGAGAAGAGGGT 59.293 63.158 0.00 0.00 0.00 4.34
1009 1036 1.416772 GTTTAGGAATCGGGAGGAGGG 59.583 57.143 0.00 0.00 0.00 4.30
1018 1045 1.296727 GGCGGAAGGTTTAGGAATCG 58.703 55.000 0.00 0.00 0.00 3.34
1110 1140 2.435938 GCTTCGTTCCGCCCATGA 60.436 61.111 0.00 0.00 0.00 3.07
1249 1279 0.039618 GCTTGTTGGGAAGATGGGGA 59.960 55.000 0.00 0.00 0.00 4.81
1252 1282 0.529378 GCAGCTTGTTGGGAAGATGG 59.471 55.000 0.00 0.00 39.31 3.51
1602 1637 6.690957 CCAAATATGCATGTAGTTTAACACCG 59.309 38.462 10.16 0.00 30.75 4.94
1885 2007 3.554324 GCAACTGTTACGAAACACAGAGA 59.446 43.478 6.32 0.00 42.74 3.10
1886 2008 3.555956 AGCAACTGTTACGAAACACAGAG 59.444 43.478 6.32 0.38 42.74 3.35
1964 2088 3.947910 AGGACCAAACTTTCATGCATG 57.052 42.857 21.07 21.07 0.00 4.06
1965 2089 3.642848 ACAAGGACCAAACTTTCATGCAT 59.357 39.130 0.00 0.00 0.00 3.96
2023 2147 8.984891 TTGCCTATTTAAGAATGACACAAATG 57.015 30.769 0.00 0.00 0.00 2.32
2503 2627 5.038033 GGTCTAGTGAAGTGAGATAAAGCG 58.962 45.833 0.00 0.00 0.00 4.68
3103 3763 5.289675 CGTCATCAGAACTTTCATCACTACC 59.710 44.000 0.00 0.00 0.00 3.18
3130 3790 7.466996 GCTTTCATCTTCGTCTTCATCATCATT 60.467 37.037 0.00 0.00 0.00 2.57
3514 4178 3.132111 TCACAGGCCCAAAAGTTCTTTTC 59.868 43.478 0.00 0.00 0.00 2.29
3715 4379 7.009265 ACAACGTATAGATCATTCTGTTGTTCG 59.991 37.037 15.57 0.00 44.25 3.95
3987 4651 7.258022 ACCACCATTTGTTTTGCTATTTTTC 57.742 32.000 0.00 0.00 0.00 2.29
4318 4984 9.739276 TCAGGATTCTCTTCATTTAAAGCTTTA 57.261 29.630 14.96 14.96 0.00 1.85
4650 5316 1.931841 GTACGGGAAAGGAAGATTCGC 59.068 52.381 0.00 0.00 36.65 4.70
4880 5546 9.221775 CACAAGAAATAAACTTTCACTGTACAC 57.778 33.333 0.00 0.00 30.62 2.90
4988 5657 2.946785 AGGAACGGAGGGAGTACATAG 58.053 52.381 0.00 0.00 0.00 2.23
5073 5744 7.541091 ACGGATGTATGTAGACATATTTTAGCG 59.459 37.037 5.69 0.00 40.18 4.26
5132 5803 7.316393 TGTACTCCCTCCATTCCTAAATATG 57.684 40.000 0.00 0.00 0.00 1.78
5166 5837 8.286800 AGTCTTATCGTCAAGAGAGATTAATCG 58.713 37.037 9.78 0.00 35.25 3.34
5297 5970 1.449778 GCCTGGGGACTTAAGACGC 60.450 63.158 10.09 11.45 0.00 5.19
5466 6139 4.038763 TCATGACAGATCCATACCCGTAAC 59.961 45.833 0.00 0.00 0.00 2.50
5477 6150 4.762289 AACCCTAGTTCATGACAGATCC 57.238 45.455 0.00 0.00 0.00 3.36
5553 6226 0.116342 AAATCCCCAAGTCAACCCCC 59.884 55.000 0.00 0.00 0.00 5.40
5587 6260 6.226787 AGCAAGAATAGTTTGATATCTCCCG 58.773 40.000 3.98 0.00 0.00 5.14
5932 6645 6.166982 CACAAGGGGTTGACAAAAAGTTAAA 58.833 36.000 0.00 0.00 0.00 1.52
5997 6713 4.714632 TGAAAGGTAGGACAGAAAACAGG 58.285 43.478 0.00 0.00 0.00 4.00
6275 6991 8.378172 TCTTTGTATACTTCTCAAGTGTTTGG 57.622 34.615 4.17 0.00 42.84 3.28
6391 7107 4.706035 ACCAGCTGCAAAATTTCAAATCA 58.294 34.783 8.66 0.00 0.00 2.57
6444 7160 2.132762 CACTAACTTGCGACTTTCCGT 58.867 47.619 0.00 0.00 0.00 4.69
6448 7164 4.690122 ACACTACACTAACTTGCGACTTT 58.310 39.130 0.00 0.00 0.00 2.66
6481 7197 7.940178 TTTTGTGCTACATATAGATACCACG 57.060 36.000 0.00 0.00 0.00 4.94
6519 7235 1.332178 CAGACGAGACGAGAAGCAAC 58.668 55.000 0.00 0.00 0.00 4.17
6554 7270 3.952967 GAGAATACCTACCACGGAAGACT 59.047 47.826 0.00 0.00 0.00 3.24
6560 7276 5.277857 AGATTTGAGAATACCTACCACGG 57.722 43.478 0.00 0.00 0.00 4.94
6687 7403 3.940209 TTGATGAACCACATTGAAGCC 57.060 42.857 0.00 0.00 39.56 4.35
6701 7417 6.070995 ACCGAACATAAGACTAGGTTTGATGA 60.071 38.462 0.00 0.00 35.92 2.92
6702 7418 6.106673 ACCGAACATAAGACTAGGTTTGATG 58.893 40.000 0.00 0.00 35.92 3.07
6703 7419 6.295719 ACCGAACATAAGACTAGGTTTGAT 57.704 37.500 0.00 0.00 35.92 2.57
6704 7420 5.337009 GGACCGAACATAAGACTAGGTTTGA 60.337 44.000 0.00 0.00 35.92 2.69
6707 7423 3.129988 CGGACCGAACATAAGACTAGGTT 59.870 47.826 8.64 0.00 34.81 3.50
6708 7424 2.686915 CGGACCGAACATAAGACTAGGT 59.313 50.000 8.64 0.00 0.00 3.08
6709 7425 2.947652 TCGGACCGAACATAAGACTAGG 59.052 50.000 15.79 0.00 31.06 3.02
6710 7426 4.627611 TTCGGACCGAACATAAGACTAG 57.372 45.455 25.18 0.00 41.05 2.57
6711 7427 4.218200 TGTTTCGGACCGAACATAAGACTA 59.782 41.667 28.45 8.28 45.64 2.59
6712 7428 3.006110 TGTTTCGGACCGAACATAAGACT 59.994 43.478 28.45 0.00 45.64 3.24
6713 7429 3.122445 GTGTTTCGGACCGAACATAAGAC 59.878 47.826 28.45 21.57 45.64 3.01
6714 7430 3.006110 AGTGTTTCGGACCGAACATAAGA 59.994 43.478 28.45 10.57 45.64 2.10
6715 7431 3.323243 AGTGTTTCGGACCGAACATAAG 58.677 45.455 28.45 0.00 45.64 1.73
6716 7432 3.389925 AGTGTTTCGGACCGAACATAA 57.610 42.857 28.45 11.74 45.64 1.90
6746 7462 0.455972 CTAAATGGGTTGCCGCGTTG 60.456 55.000 4.92 0.00 33.46 4.10
6747 7463 1.591504 CCTAAATGGGTTGCCGCGTT 61.592 55.000 4.92 0.00 34.50 4.84
6757 7474 2.310538 GTCCAATCTGGCCTAAATGGG 58.689 52.381 3.32 1.72 37.47 4.00
6773 7490 1.586028 GGTGGCTAACGTACGTCCA 59.414 57.895 23.05 21.26 0.00 4.02
6774 7491 1.514873 CGGTGGCTAACGTACGTCC 60.515 63.158 23.05 18.80 0.00 4.79
6795 7512 3.128349 GGCTCTTCAAAACACGACACTA 58.872 45.455 0.00 0.00 0.00 2.74
6800 7517 4.213270 CACAATAGGCTCTTCAAAACACGA 59.787 41.667 0.00 0.00 0.00 4.35
6804 7521 5.904362 ATCCACAATAGGCTCTTCAAAAC 57.096 39.130 0.00 0.00 0.00 2.43
6805 7522 5.885912 GGTATCCACAATAGGCTCTTCAAAA 59.114 40.000 0.00 0.00 0.00 2.44
6807 7524 4.473196 TGGTATCCACAATAGGCTCTTCAA 59.527 41.667 0.00 0.00 0.00 2.69
6811 7528 4.687219 GCTTTGGTATCCACAATAGGCTCT 60.687 45.833 0.00 0.00 30.78 4.09
6814 7531 2.623416 GGCTTTGGTATCCACAATAGGC 59.377 50.000 0.00 0.00 30.78 3.93
6815 7532 2.878406 CGGCTTTGGTATCCACAATAGG 59.122 50.000 0.00 0.00 30.78 2.57
6821 7538 2.119029 GGGCGGCTTTGGTATCCAC 61.119 63.158 9.56 0.00 30.78 4.02
6836 7553 2.358372 TTTAGGGGGTACGTCGGGC 61.358 63.158 0.00 0.00 0.00 6.13
6839 7556 0.897621 AAGGTTTAGGGGGTACGTCG 59.102 55.000 0.00 0.00 0.00 5.12
6840 7557 3.742327 GCATAAGGTTTAGGGGGTACGTC 60.742 52.174 0.00 0.00 0.00 4.34
6841 7558 2.171237 GCATAAGGTTTAGGGGGTACGT 59.829 50.000 0.00 0.00 0.00 3.57
6842 7559 2.436911 AGCATAAGGTTTAGGGGGTACG 59.563 50.000 0.00 0.00 0.00 3.67
6843 7560 4.515028 AAGCATAAGGTTTAGGGGGTAC 57.485 45.455 0.00 0.00 29.59 3.34
6844 7561 5.398239 GCTTAAGCATAAGGTTTAGGGGGTA 60.398 44.000 22.59 0.00 39.17 3.69
6845 7562 4.630430 GCTTAAGCATAAGGTTTAGGGGGT 60.630 45.833 22.59 0.00 39.17 4.95
6846 7563 3.889538 GCTTAAGCATAAGGTTTAGGGGG 59.110 47.826 22.59 0.00 39.17 5.40
6861 7578 1.557371 AGGGGAGAGAAGTGCTTAAGC 59.443 52.381 20.84 20.84 42.50 3.09
6862 7579 2.169561 GGAGGGGAGAGAAGTGCTTAAG 59.830 54.545 0.00 0.00 0.00 1.85
6863 7580 2.188817 GGAGGGGAGAGAAGTGCTTAA 58.811 52.381 0.00 0.00 0.00 1.85
6864 7581 1.362932 AGGAGGGGAGAGAAGTGCTTA 59.637 52.381 0.00 0.00 0.00 3.09
6865 7582 0.118144 AGGAGGGGAGAGAAGTGCTT 59.882 55.000 0.00 0.00 0.00 3.91
6866 7583 1.011595 TAGGAGGGGAGAGAAGTGCT 58.988 55.000 0.00 0.00 0.00 4.40
6867 7584 1.867363 TTAGGAGGGGAGAGAAGTGC 58.133 55.000 0.00 0.00 0.00 4.40
6868 7585 3.449377 GTCTTTAGGAGGGGAGAGAAGTG 59.551 52.174 0.00 0.00 0.00 3.16
6869 7586 3.715287 GTCTTTAGGAGGGGAGAGAAGT 58.285 50.000 0.00 0.00 0.00 3.01
6870 7587 2.691011 CGTCTTTAGGAGGGGAGAGAAG 59.309 54.545 0.00 0.00 0.00 2.85
6871 7588 2.042706 ACGTCTTTAGGAGGGGAGAGAA 59.957 50.000 0.00 0.00 34.47 2.87
6872 7589 1.639628 ACGTCTTTAGGAGGGGAGAGA 59.360 52.381 0.00 0.00 34.47 3.10
6873 7590 2.146920 ACGTCTTTAGGAGGGGAGAG 57.853 55.000 0.00 0.00 34.47 3.20
6874 7591 2.042706 AGAACGTCTTTAGGAGGGGAGA 59.957 50.000 0.00 0.00 34.47 3.71
6875 7592 2.427812 GAGAACGTCTTTAGGAGGGGAG 59.572 54.545 0.00 0.00 34.47 4.30
6876 7593 2.225192 TGAGAACGTCTTTAGGAGGGGA 60.225 50.000 0.00 0.00 34.47 4.81
6877 7594 2.094130 GTGAGAACGTCTTTAGGAGGGG 60.094 54.545 0.00 0.00 34.47 4.79
6878 7595 2.094130 GGTGAGAACGTCTTTAGGAGGG 60.094 54.545 0.00 0.00 34.47 4.30
6879 7596 2.561419 TGGTGAGAACGTCTTTAGGAGG 59.439 50.000 0.00 0.00 36.08 4.30
6880 7597 3.005472 TGTGGTGAGAACGTCTTTAGGAG 59.995 47.826 0.00 0.00 0.00 3.69
6881 7598 2.960384 TGTGGTGAGAACGTCTTTAGGA 59.040 45.455 0.00 0.00 0.00 2.94
6882 7599 3.057734 GTGTGGTGAGAACGTCTTTAGG 58.942 50.000 0.00 0.00 0.00 2.69
6883 7600 3.057734 GGTGTGGTGAGAACGTCTTTAG 58.942 50.000 0.00 0.00 0.00 1.85
6884 7601 2.544277 CGGTGTGGTGAGAACGTCTTTA 60.544 50.000 0.00 0.00 0.00 1.85
6885 7602 1.805120 CGGTGTGGTGAGAACGTCTTT 60.805 52.381 0.00 0.00 0.00 2.52
6886 7603 0.249322 CGGTGTGGTGAGAACGTCTT 60.249 55.000 0.00 0.00 0.00 3.01
6887 7604 1.362717 CGGTGTGGTGAGAACGTCT 59.637 57.895 0.00 0.00 0.00 4.18
6888 7605 2.308039 GCGGTGTGGTGAGAACGTC 61.308 63.158 0.00 0.00 0.00 4.34
6889 7606 2.279918 GCGGTGTGGTGAGAACGT 60.280 61.111 0.00 0.00 0.00 3.99
6890 7607 1.157870 AAAGCGGTGTGGTGAGAACG 61.158 55.000 0.00 0.00 0.00 3.95
6891 7608 1.021968 AAAAGCGGTGTGGTGAGAAC 58.978 50.000 0.00 0.00 0.00 3.01
6892 7609 1.021202 CAAAAGCGGTGTGGTGAGAA 58.979 50.000 0.00 0.00 0.00 2.87
6893 7610 0.179234 TCAAAAGCGGTGTGGTGAGA 59.821 50.000 0.00 0.00 0.00 3.27
6894 7611 0.307760 GTCAAAAGCGGTGTGGTGAG 59.692 55.000 0.00 0.00 0.00 3.51
6895 7612 1.098712 GGTCAAAAGCGGTGTGGTGA 61.099 55.000 0.00 0.00 0.00 4.02
6896 7613 1.358759 GGTCAAAAGCGGTGTGGTG 59.641 57.895 0.00 0.00 0.00 4.17
6897 7614 2.184167 CGGTCAAAAGCGGTGTGGT 61.184 57.895 0.00 0.00 42.53 4.16
6898 7615 2.637025 CGGTCAAAAGCGGTGTGG 59.363 61.111 0.00 0.00 42.53 4.17
6905 7622 1.578206 GCAGGGAGACGGTCAAAAGC 61.578 60.000 11.27 4.08 0.00 3.51
6906 7623 0.250295 TGCAGGGAGACGGTCAAAAG 60.250 55.000 11.27 0.00 0.00 2.27
6907 7624 0.400213 ATGCAGGGAGACGGTCAAAA 59.600 50.000 11.27 0.00 0.00 2.44
6908 7625 0.321564 CATGCAGGGAGACGGTCAAA 60.322 55.000 11.27 0.00 0.00 2.69
6909 7626 1.296392 CATGCAGGGAGACGGTCAA 59.704 57.895 11.27 0.00 0.00 3.18
6910 7627 2.659063 CCATGCAGGGAGACGGTCA 61.659 63.158 13.35 0.00 0.00 4.02
6911 7628 2.187946 CCATGCAGGGAGACGGTC 59.812 66.667 13.35 0.00 0.00 4.79
6920 7637 3.077484 TCTTCTTCTTTCCCATGCAGG 57.923 47.619 0.00 0.00 37.03 4.85
6921 7638 3.311871 CGATCTTCTTCTTTCCCATGCAG 59.688 47.826 0.00 0.00 0.00 4.41
6922 7639 3.273434 CGATCTTCTTCTTTCCCATGCA 58.727 45.455 0.00 0.00 0.00 3.96
6923 7640 3.274288 ACGATCTTCTTCTTTCCCATGC 58.726 45.455 0.00 0.00 0.00 4.06
6924 7641 4.764172 AGACGATCTTCTTCTTTCCCATG 58.236 43.478 0.00 0.00 0.00 3.66
6925 7642 4.141824 GGAGACGATCTTCTTCTTTCCCAT 60.142 45.833 2.87 0.00 0.00 4.00
6926 7643 3.195825 GGAGACGATCTTCTTCTTTCCCA 59.804 47.826 2.87 0.00 0.00 4.37
6927 7644 3.431068 GGGAGACGATCTTCTTCTTTCCC 60.431 52.174 7.40 7.44 27.04 3.97
6928 7645 3.449377 AGGGAGACGATCTTCTTCTTTCC 59.551 47.826 7.40 2.29 0.00 3.13
6929 7646 4.429108 CAGGGAGACGATCTTCTTCTTTC 58.571 47.826 7.40 0.00 0.00 2.62
6930 7647 3.368948 GCAGGGAGACGATCTTCTTCTTT 60.369 47.826 7.40 0.00 0.00 2.52
6931 7648 2.167487 GCAGGGAGACGATCTTCTTCTT 59.833 50.000 7.40 0.00 0.00 2.52
6932 7649 1.754226 GCAGGGAGACGATCTTCTTCT 59.246 52.381 7.40 4.31 0.00 2.85
6933 7650 1.478510 TGCAGGGAGACGATCTTCTTC 59.521 52.381 2.87 0.67 0.00 2.87
6934 7651 1.561643 TGCAGGGAGACGATCTTCTT 58.438 50.000 2.87 0.00 0.00 2.52
6935 7652 1.411977 CATGCAGGGAGACGATCTTCT 59.588 52.381 0.50 0.50 0.00 2.85
6936 7653 1.539929 CCATGCAGGGAGACGATCTTC 60.540 57.143 13.35 0.00 0.00 2.87
6937 7654 0.467384 CCATGCAGGGAGACGATCTT 59.533 55.000 13.35 0.00 0.00 2.40
6938 7655 2.131405 CCATGCAGGGAGACGATCT 58.869 57.895 13.35 0.00 0.00 2.75
6939 7656 4.766970 CCATGCAGGGAGACGATC 57.233 61.111 13.35 0.00 0.00 3.69
6948 7665 3.077484 TCTTCTTCTTTCCCATGCAGG 57.923 47.619 0.00 0.00 37.03 4.85
6949 7666 3.181489 GCATCTTCTTCTTTCCCATGCAG 60.181 47.826 0.00 0.00 36.11 4.41
6950 7667 2.756760 GCATCTTCTTCTTTCCCATGCA 59.243 45.455 0.00 0.00 36.11 3.96
6951 7668 3.022406 AGCATCTTCTTCTTTCCCATGC 58.978 45.455 0.00 0.00 36.27 4.06
6952 7669 4.267536 TCAGCATCTTCTTCTTTCCCATG 58.732 43.478 0.00 0.00 0.00 3.66
6953 7670 4.581309 TCAGCATCTTCTTCTTTCCCAT 57.419 40.909 0.00 0.00 0.00 4.00
6954 7671 4.330250 CTTCAGCATCTTCTTCTTTCCCA 58.670 43.478 0.00 0.00 0.00 4.37
6955 7672 3.693578 CCTTCAGCATCTTCTTCTTTCCC 59.306 47.826 0.00 0.00 0.00 3.97
6956 7673 4.583871 TCCTTCAGCATCTTCTTCTTTCC 58.416 43.478 0.00 0.00 0.00 3.13
6957 7674 4.635324 CCTCCTTCAGCATCTTCTTCTTTC 59.365 45.833 0.00 0.00 0.00 2.62
6958 7675 4.587891 CCTCCTTCAGCATCTTCTTCTTT 58.412 43.478 0.00 0.00 0.00 2.52
6959 7676 3.621958 GCCTCCTTCAGCATCTTCTTCTT 60.622 47.826 0.00 0.00 0.00 2.52
6960 7677 2.093021 GCCTCCTTCAGCATCTTCTTCT 60.093 50.000 0.00 0.00 0.00 2.85
6961 7678 2.093021 AGCCTCCTTCAGCATCTTCTTC 60.093 50.000 0.00 0.00 0.00 2.87
6962 7679 1.914798 AGCCTCCTTCAGCATCTTCTT 59.085 47.619 0.00 0.00 0.00 2.52
6963 7680 1.582389 AGCCTCCTTCAGCATCTTCT 58.418 50.000 0.00 0.00 0.00 2.85
6964 7681 2.015587 CAAGCCTCCTTCAGCATCTTC 58.984 52.381 0.00 0.00 0.00 2.87
6965 7682 1.632409 TCAAGCCTCCTTCAGCATCTT 59.368 47.619 0.00 0.00 0.00 2.40
6966 7683 1.283347 TCAAGCCTCCTTCAGCATCT 58.717 50.000 0.00 0.00 0.00 2.90
6967 7684 2.119801 TTCAAGCCTCCTTCAGCATC 57.880 50.000 0.00 0.00 0.00 3.91
6968 7685 2.652590 GATTCAAGCCTCCTTCAGCAT 58.347 47.619 0.00 0.00 0.00 3.79
6969 7686 1.340405 GGATTCAAGCCTCCTTCAGCA 60.340 52.381 0.00 0.00 0.00 4.41
6970 7687 1.387539 GGATTCAAGCCTCCTTCAGC 58.612 55.000 0.00 0.00 0.00 4.26
6971 7688 1.208052 TCGGATTCAAGCCTCCTTCAG 59.792 52.381 0.00 0.00 0.00 3.02
6972 7689 1.275666 TCGGATTCAAGCCTCCTTCA 58.724 50.000 0.00 0.00 0.00 3.02
6973 7690 2.158900 TCATCGGATTCAAGCCTCCTTC 60.159 50.000 0.00 0.00 0.00 3.46
6974 7691 1.839994 TCATCGGATTCAAGCCTCCTT 59.160 47.619 0.00 0.00 0.00 3.36
6975 7692 1.500474 TCATCGGATTCAAGCCTCCT 58.500 50.000 0.00 0.00 0.00 3.69
6976 7693 2.149578 CATCATCGGATTCAAGCCTCC 58.850 52.381 0.00 0.00 0.00 4.30
6977 7694 2.547211 CACATCATCGGATTCAAGCCTC 59.453 50.000 0.00 0.00 0.00 4.70
6978 7695 2.569059 CACATCATCGGATTCAAGCCT 58.431 47.619 0.00 0.00 0.00 4.58
6979 7696 1.605710 CCACATCATCGGATTCAAGCC 59.394 52.381 0.00 0.00 0.00 4.35
6980 7697 1.605710 CCCACATCATCGGATTCAAGC 59.394 52.381 0.00 0.00 0.00 4.01
6981 7698 2.923121 ACCCACATCATCGGATTCAAG 58.077 47.619 0.00 0.00 0.00 3.02
6982 7699 3.433031 GGTACCCACATCATCGGATTCAA 60.433 47.826 0.00 0.00 0.00 2.69
6983 7700 2.104111 GGTACCCACATCATCGGATTCA 59.896 50.000 0.00 0.00 0.00 2.57
6984 7701 2.767505 GGTACCCACATCATCGGATTC 58.232 52.381 0.00 0.00 0.00 2.52
6985 7702 2.930826 GGTACCCACATCATCGGATT 57.069 50.000 0.00 0.00 0.00 3.01
7000 7717 1.375523 CAACACGCTGGAGGGGTAC 60.376 63.158 0.00 0.00 39.13 3.34
7001 7718 3.065306 CAACACGCTGGAGGGGTA 58.935 61.111 0.00 0.00 39.13 3.69
7002 7719 4.643387 GCAACACGCTGGAGGGGT 62.643 66.667 0.00 0.00 41.97 4.95
7004 7721 4.641645 TGGCAACACGCTGGAGGG 62.642 66.667 0.00 0.00 46.17 4.30
7022 7739 3.905678 CCGAGCTACCTGGCGAGG 61.906 72.222 14.03 14.03 46.21 4.63
7023 7740 3.905678 CCCGAGCTACCTGGCGAG 61.906 72.222 0.00 0.00 37.29 5.03
7042 7759 0.179137 GATGATGTGTCTCGCCACGA 60.179 55.000 0.00 0.00 38.20 4.35
7043 7760 1.474648 CGATGATGTGTCTCGCCACG 61.475 60.000 0.00 0.00 38.20 4.94
7044 7761 2.291843 CGATGATGTGTCTCGCCAC 58.708 57.895 0.00 0.00 35.86 5.01
7045 7762 4.812814 CGATGATGTGTCTCGCCA 57.187 55.556 0.00 0.00 0.00 5.69
7048 7765 0.458370 TGTGGCGATGATGTGTCTCG 60.458 55.000 0.00 0.00 35.57 4.04
7049 7766 1.945387 ATGTGGCGATGATGTGTCTC 58.055 50.000 0.00 0.00 0.00 3.36
7050 7767 2.283298 GAATGTGGCGATGATGTGTCT 58.717 47.619 0.00 0.00 0.00 3.41
7051 7768 1.331756 GGAATGTGGCGATGATGTGTC 59.668 52.381 0.00 0.00 0.00 3.67
7052 7769 1.339920 TGGAATGTGGCGATGATGTGT 60.340 47.619 0.00 0.00 0.00 3.72
7053 7770 1.381522 TGGAATGTGGCGATGATGTG 58.618 50.000 0.00 0.00 0.00 3.21
7054 7771 2.224606 GATGGAATGTGGCGATGATGT 58.775 47.619 0.00 0.00 0.00 3.06
7055 7772 1.538512 GGATGGAATGTGGCGATGATG 59.461 52.381 0.00 0.00 0.00 3.07
7056 7773 1.422781 AGGATGGAATGTGGCGATGAT 59.577 47.619 0.00 0.00 0.00 2.45
7057 7774 0.839277 AGGATGGAATGTGGCGATGA 59.161 50.000 0.00 0.00 0.00 2.92
7058 7775 0.949397 CAGGATGGAATGTGGCGATG 59.051 55.000 0.00 0.00 0.00 3.84
7059 7776 0.839277 TCAGGATGGAATGTGGCGAT 59.161 50.000 0.00 0.00 36.16 4.58
7060 7777 0.107703 GTCAGGATGGAATGTGGCGA 60.108 55.000 0.00 0.00 36.16 5.54
7061 7778 0.107508 AGTCAGGATGGAATGTGGCG 60.108 55.000 0.00 0.00 36.16 5.69
7062 7779 3.281727 TTAGTCAGGATGGAATGTGGC 57.718 47.619 0.00 0.00 36.16 5.01
7063 7780 4.577693 CACATTAGTCAGGATGGAATGTGG 59.422 45.833 15.09 1.50 46.36 4.17
7064 7781 5.746307 CACATTAGTCAGGATGGAATGTG 57.254 43.478 10.59 10.59 45.74 3.21
7065 7782 4.202441 GCACATTAGTCAGGATGGAATGT 58.798 43.478 0.00 0.00 41.54 2.71
7066 7783 3.567164 GGCACATTAGTCAGGATGGAATG 59.433 47.826 0.00 0.00 37.22 2.67
7067 7784 3.461085 AGGCACATTAGTCAGGATGGAAT 59.539 43.478 0.00 0.00 36.16 3.01
7068 7785 2.846206 AGGCACATTAGTCAGGATGGAA 59.154 45.455 0.00 0.00 36.16 3.53
7069 7786 2.435805 GAGGCACATTAGTCAGGATGGA 59.564 50.000 0.00 0.00 36.16 3.41
7070 7787 2.804572 CGAGGCACATTAGTCAGGATGG 60.805 54.545 0.00 0.00 36.16 3.51
7071 7788 2.477825 CGAGGCACATTAGTCAGGATG 58.522 52.381 0.00 0.00 37.54 3.51
7072 7789 1.202580 GCGAGGCACATTAGTCAGGAT 60.203 52.381 0.00 0.00 0.00 3.24
7073 7790 0.175760 GCGAGGCACATTAGTCAGGA 59.824 55.000 0.00 0.00 0.00 3.86
7074 7791 0.811616 GGCGAGGCACATTAGTCAGG 60.812 60.000 0.00 0.00 0.00 3.86
7075 7792 1.148157 CGGCGAGGCACATTAGTCAG 61.148 60.000 0.00 0.00 0.00 3.51
7076 7793 1.153647 CGGCGAGGCACATTAGTCA 60.154 57.895 0.00 0.00 0.00 3.41
7077 7794 1.883084 CCGGCGAGGCACATTAGTC 60.883 63.158 9.30 0.00 0.00 2.59
7078 7795 2.186903 CCGGCGAGGCACATTAGT 59.813 61.111 9.30 0.00 0.00 2.24
7103 7820 3.966026 GAGGAAGACGGGCACGACG 62.966 68.421 19.19 0.61 44.60 5.12
7104 7821 2.126031 GAGGAAGACGGGCACGAC 60.126 66.667 19.19 9.92 44.60 4.34
7105 7822 3.379445 GGAGGAAGACGGGCACGA 61.379 66.667 19.19 0.00 44.60 4.35
7107 7824 1.153349 GATGGAGGAAGACGGGCAC 60.153 63.158 0.00 0.00 0.00 5.01
7108 7825 0.982852 ATGATGGAGGAAGACGGGCA 60.983 55.000 0.00 0.00 0.00 5.36
7109 7826 0.533755 CATGATGGAGGAAGACGGGC 60.534 60.000 0.00 0.00 0.00 6.13
7110 7827 1.123077 TCATGATGGAGGAAGACGGG 58.877 55.000 0.00 0.00 0.00 5.28
7111 7828 2.169352 ACTTCATGATGGAGGAAGACGG 59.831 50.000 5.59 0.00 43.86 4.79
7112 7829 3.193263 CACTTCATGATGGAGGAAGACG 58.807 50.000 5.59 0.00 43.86 4.18
7113 7830 3.539604 CCACTTCATGATGGAGGAAGAC 58.460 50.000 9.41 0.00 43.86 3.01
7114 7831 2.507058 CCCACTTCATGATGGAGGAAGA 59.493 50.000 15.66 0.00 43.86 2.87
7115 7832 2.507058 TCCCACTTCATGATGGAGGAAG 59.493 50.000 15.66 2.10 46.07 3.46
7116 7833 2.507058 CTCCCACTTCATGATGGAGGAA 59.493 50.000 15.66 0.00 39.14 3.36
7117 7834 2.121948 CTCCCACTTCATGATGGAGGA 58.878 52.381 15.66 16.02 39.14 3.71
7118 7835 1.476471 GCTCCCACTTCATGATGGAGG 60.476 57.143 22.40 17.86 42.32 4.30
7119 7836 1.476471 GGCTCCCACTTCATGATGGAG 60.476 57.143 15.66 17.76 44.38 3.86
7120 7837 0.548031 GGCTCCCACTTCATGATGGA 59.452 55.000 15.66 9.56 38.34 3.41
7121 7838 0.466922 GGGCTCCCACTTCATGATGG 60.467 60.000 12.76 10.50 35.81 3.51
7122 7839 0.549950 AGGGCTCCCACTTCATGATG 59.450 55.000 7.82 7.04 38.92 3.07
7123 7840 0.842635 GAGGGCTCCCACTTCATGAT 59.157 55.000 7.82 0.00 38.92 2.45
7124 7841 1.274703 GGAGGGCTCCCACTTCATGA 61.275 60.000 7.82 0.00 43.94 3.07
7125 7842 1.225704 GGAGGGCTCCCACTTCATG 59.774 63.158 7.82 0.00 43.94 3.07
7126 7843 3.746957 GGAGGGCTCCCACTTCAT 58.253 61.111 7.82 0.00 43.94 2.57
7135 7852 2.835895 GAGGTCGGAGGAGGGCTC 60.836 72.222 0.00 0.00 0.00 4.70
7136 7853 4.467107 GGAGGTCGGAGGAGGGCT 62.467 72.222 0.00 0.00 0.00 5.19
7138 7855 3.438615 ATCGGAGGTCGGAGGAGGG 62.439 68.421 0.00 0.00 39.77 4.30
7139 7856 2.196229 ATCGGAGGTCGGAGGAGG 59.804 66.667 0.00 0.00 39.77 4.30
7140 7857 1.152943 TCATCGGAGGTCGGAGGAG 60.153 63.158 0.00 0.00 39.77 3.69
7141 7858 1.453379 GTCATCGGAGGTCGGAGGA 60.453 63.158 0.00 0.00 39.77 3.71
7142 7859 1.109920 ATGTCATCGGAGGTCGGAGG 61.110 60.000 0.00 0.00 39.77 4.30
7143 7860 0.312416 GATGTCATCGGAGGTCGGAG 59.688 60.000 0.00 0.00 39.77 4.63
7144 7861 2.415825 GATGTCATCGGAGGTCGGA 58.584 57.895 0.00 0.00 39.77 4.55
7154 7871 1.202687 TGCCTCCCAATCGATGTCATC 60.203 52.381 0.00 2.43 0.00 2.92
7155 7872 0.839277 TGCCTCCCAATCGATGTCAT 59.161 50.000 0.00 0.00 0.00 3.06
7156 7873 0.178767 CTGCCTCCCAATCGATGTCA 59.821 55.000 0.00 0.00 0.00 3.58
7157 7874 1.162800 GCTGCCTCCCAATCGATGTC 61.163 60.000 0.00 0.00 0.00 3.06
7158 7875 1.153086 GCTGCCTCCCAATCGATGT 60.153 57.895 0.00 0.00 0.00 3.06
7159 7876 2.249535 CGCTGCCTCCCAATCGATG 61.250 63.158 0.00 0.00 0.00 3.84
7160 7877 2.109799 CGCTGCCTCCCAATCGAT 59.890 61.111 0.00 0.00 0.00 3.59
7161 7878 4.161295 CCGCTGCCTCCCAATCGA 62.161 66.667 0.00 0.00 0.00 3.59
7162 7879 4.473520 ACCGCTGCCTCCCAATCG 62.474 66.667 0.00 0.00 0.00 3.34
7163 7880 2.825836 CACCGCTGCCTCCCAATC 60.826 66.667 0.00 0.00 0.00 2.67
7164 7881 3.329889 TCACCGCTGCCTCCCAAT 61.330 61.111 0.00 0.00 0.00 3.16
7165 7882 4.329545 GTCACCGCTGCCTCCCAA 62.330 66.667 0.00 0.00 0.00 4.12
7168 7885 4.803426 CTCGTCACCGCTGCCTCC 62.803 72.222 0.00 0.00 0.00 4.30
7169 7886 4.803426 CCTCGTCACCGCTGCCTC 62.803 72.222 0.00 0.00 0.00 4.70
7172 7889 3.649277 ATGACCTCGTCACCGCTGC 62.649 63.158 0.00 0.00 45.65 5.25
7173 7890 1.517257 GATGACCTCGTCACCGCTG 60.517 63.158 0.00 0.00 45.65 5.18
7174 7891 1.532604 TTGATGACCTCGTCACCGCT 61.533 55.000 0.00 0.00 45.65 5.52
7175 7892 1.080093 TTGATGACCTCGTCACCGC 60.080 57.895 0.00 0.00 45.65 5.68
7176 7893 0.736325 GGTTGATGACCTCGTCACCG 60.736 60.000 0.00 0.00 45.65 4.94
7177 7894 0.736325 CGGTTGATGACCTCGTCACC 60.736 60.000 0.00 2.47 45.65 4.02
7178 7895 1.352156 GCGGTTGATGACCTCGTCAC 61.352 60.000 0.00 0.00 45.65 3.67
7179 7896 1.080093 GCGGTTGATGACCTCGTCA 60.080 57.895 0.00 0.00 46.92 4.35
7180 7897 1.810030 GGCGGTTGATGACCTCGTC 60.810 63.158 0.00 0.00 46.92 4.20
7181 7898 2.264794 GGCGGTTGATGACCTCGT 59.735 61.111 0.00 0.00 46.92 4.18
7182 7899 2.511600 GGGCGGTTGATGACCTCG 60.512 66.667 0.00 0.00 46.92 4.63
7183 7900 1.745489 GTGGGCGGTTGATGACCTC 60.745 63.158 0.00 0.00 46.92 3.85
7184 7901 2.351276 GTGGGCGGTTGATGACCT 59.649 61.111 0.00 0.00 46.92 3.85
7185 7902 2.750237 GGTGGGCGGTTGATGACC 60.750 66.667 0.00 0.00 45.55 4.02
7186 7903 2.033448 TGGTGGGCGGTTGATGAC 59.967 61.111 0.00 0.00 0.00 3.06
7187 7904 2.033448 GTGGTGGGCGGTTGATGA 59.967 61.111 0.00 0.00 0.00 2.92
7188 7905 2.282110 TGTGGTGGGCGGTTGATG 60.282 61.111 0.00 0.00 0.00 3.07
7189 7906 2.282180 GTGTGGTGGGCGGTTGAT 60.282 61.111 0.00 0.00 0.00 2.57
7190 7907 3.484806 AGTGTGGTGGGCGGTTGA 61.485 61.111 0.00 0.00 0.00 3.18
7191 7908 3.286751 CAGTGTGGTGGGCGGTTG 61.287 66.667 0.00 0.00 0.00 3.77
7194 7911 3.329542 ATAGCAGTGTGGTGGGCGG 62.330 63.158 0.00 0.00 0.00 6.13
7195 7912 1.815421 GATAGCAGTGTGGTGGGCG 60.815 63.158 0.00 0.00 0.00 6.13
7196 7913 1.815421 CGATAGCAGTGTGGTGGGC 60.815 63.158 0.00 0.00 0.00 5.36
7197 7914 0.460284 GTCGATAGCAGTGTGGTGGG 60.460 60.000 0.00 0.00 0.00 4.61
7198 7915 0.460284 GGTCGATAGCAGTGTGGTGG 60.460 60.000 0.00 0.00 0.00 4.61
7199 7916 0.246360 TGGTCGATAGCAGTGTGGTG 59.754 55.000 0.00 0.00 0.00 4.17
7200 7917 0.246635 GTGGTCGATAGCAGTGTGGT 59.753 55.000 0.00 0.00 32.75 4.16
7201 7918 0.460284 GGTGGTCGATAGCAGTGTGG 60.460 60.000 0.00 0.00 32.75 4.17
7202 7919 0.532573 AGGTGGTCGATAGCAGTGTG 59.467 55.000 0.00 0.00 32.75 3.82
7203 7920 0.818296 GAGGTGGTCGATAGCAGTGT 59.182 55.000 0.00 0.00 32.75 3.55
7204 7921 0.103208 GGAGGTGGTCGATAGCAGTG 59.897 60.000 0.00 0.00 32.75 3.66
7205 7922 1.043673 GGGAGGTGGTCGATAGCAGT 61.044 60.000 0.00 0.00 32.75 4.40
7206 7923 1.742768 GGGAGGTGGTCGATAGCAG 59.257 63.158 0.00 0.00 32.75 4.24
7207 7924 3.950232 GGGAGGTGGTCGATAGCA 58.050 61.111 0.00 0.00 0.00 3.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.