Multiple sequence alignment - TraesCS7D01G334200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G334200 chr7D 100.000 2414 0 0 1 2414 426173629 426176042 0.000000e+00 4458.0
1 TraesCS7D01G334200 chr7D 86.693 1285 100 28 472 1731 529746549 529745311 0.000000e+00 1360.0
2 TraesCS7D01G334200 chr7D 86.030 1267 130 29 472 1731 473647713 473648939 0.000000e+00 1315.0
3 TraesCS7D01G334200 chr7D 89.884 1038 56 19 719 1727 75802136 75803153 0.000000e+00 1290.0
4 TraesCS7D01G334200 chr7D 86.573 499 35 20 472 946 560252981 560253471 2.750000e-144 521.0
5 TraesCS7D01G334200 chr5D 88.153 1283 93 33 472 1727 399295736 399296986 0.000000e+00 1472.0
6 TraesCS7D01G334200 chr5D 84.767 1267 133 32 471 1727 424819121 424820337 0.000000e+00 1216.0
7 TraesCS7D01G334200 chr5D 92.296 675 34 16 522 1194 237587654 237586996 0.000000e+00 942.0
8 TraesCS7D01G334200 chr1D 87.221 1299 106 40 474 1727 12411282 12412565 0.000000e+00 1424.0
9 TraesCS7D01G334200 chr1D 87.232 1167 94 38 594 1738 391646044 391644911 0.000000e+00 1279.0
10 TraesCS7D01G334200 chr6D 85.294 1292 118 42 472 1727 120664812 120666067 0.000000e+00 1267.0
11 TraesCS7D01G334200 chr6D 85.008 1274 114 33 469 1727 418767597 418768808 0.000000e+00 1223.0
12 TraesCS7D01G334200 chr6D 86.297 883 83 19 467 1347 86639349 86638503 0.000000e+00 926.0
13 TraesCS7D01G334200 chr3D 89.244 1032 78 21 723 1730 460440981 460439959 0.000000e+00 1260.0
14 TraesCS7D01G334200 chr2A 85.241 1267 140 27 474 1731 121950414 121949186 0.000000e+00 1260.0
15 TraesCS7D01G334200 chr2A 83.703 1264 123 32 474 1729 723575486 723576674 0.000000e+00 1116.0
16 TraesCS7D01G334200 chr2A 82.390 477 39 20 472 946 739657411 739656978 8.150000e-100 374.0
17 TraesCS7D01G334200 chr2A 92.045 88 6 1 1640 1726 673635653 673635740 3.260000e-24 122.0
18 TraesCS7D01G334200 chr2B 80.234 1280 166 58 472 1727 202908375 202909591 0.000000e+00 881.0
19 TraesCS7D01G334200 chr7B 94.344 389 17 2 1997 2385 443349368 443349751 2.070000e-165 592.0
20 TraesCS7D01G334200 chr7B 86.634 202 27 0 1 202 443349016 443349217 8.680000e-55 224.0
21 TraesCS7D01G334200 chr7B 91.304 92 7 1 358 449 443349213 443349303 9.060000e-25 124.0
22 TraesCS7D01G334200 chr7B 97.297 37 1 0 426 462 443349319 443349355 2.000000e-06 63.9
23 TraesCS7D01G334200 chr7A 89.362 376 35 3 2035 2410 507167726 507167356 3.630000e-128 468.0
24 TraesCS7D01G334200 chr7A 89.552 67 5 2 1963 2029 507167824 507167760 1.540000e-12 84.2
25 TraesCS7D01G334200 chr5B 85.259 251 29 5 474 720 8526747 8526501 3.980000e-63 252.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G334200 chr7D 426173629 426176042 2413 False 4458.000 4458 100.00000 1 2414 1 chr7D.!!$F2 2413
1 TraesCS7D01G334200 chr7D 529745311 529746549 1238 True 1360.000 1360 86.69300 472 1731 1 chr7D.!!$R1 1259
2 TraesCS7D01G334200 chr7D 473647713 473648939 1226 False 1315.000 1315 86.03000 472 1731 1 chr7D.!!$F3 1259
3 TraesCS7D01G334200 chr7D 75802136 75803153 1017 False 1290.000 1290 89.88400 719 1727 1 chr7D.!!$F1 1008
4 TraesCS7D01G334200 chr5D 399295736 399296986 1250 False 1472.000 1472 88.15300 472 1727 1 chr5D.!!$F1 1255
5 TraesCS7D01G334200 chr5D 424819121 424820337 1216 False 1216.000 1216 84.76700 471 1727 1 chr5D.!!$F2 1256
6 TraesCS7D01G334200 chr5D 237586996 237587654 658 True 942.000 942 92.29600 522 1194 1 chr5D.!!$R1 672
7 TraesCS7D01G334200 chr1D 12411282 12412565 1283 False 1424.000 1424 87.22100 474 1727 1 chr1D.!!$F1 1253
8 TraesCS7D01G334200 chr1D 391644911 391646044 1133 True 1279.000 1279 87.23200 594 1738 1 chr1D.!!$R1 1144
9 TraesCS7D01G334200 chr6D 120664812 120666067 1255 False 1267.000 1267 85.29400 472 1727 1 chr6D.!!$F1 1255
10 TraesCS7D01G334200 chr6D 418767597 418768808 1211 False 1223.000 1223 85.00800 469 1727 1 chr6D.!!$F2 1258
11 TraesCS7D01G334200 chr6D 86638503 86639349 846 True 926.000 926 86.29700 467 1347 1 chr6D.!!$R1 880
12 TraesCS7D01G334200 chr3D 460439959 460440981 1022 True 1260.000 1260 89.24400 723 1730 1 chr3D.!!$R1 1007
13 TraesCS7D01G334200 chr2A 121949186 121950414 1228 True 1260.000 1260 85.24100 474 1731 1 chr2A.!!$R1 1257
14 TraesCS7D01G334200 chr2A 723575486 723576674 1188 False 1116.000 1116 83.70300 474 1729 1 chr2A.!!$F2 1255
15 TraesCS7D01G334200 chr2B 202908375 202909591 1216 False 881.000 881 80.23400 472 1727 1 chr2B.!!$F1 1255
16 TraesCS7D01G334200 chr7B 443349016 443349751 735 False 250.975 592 92.39475 1 2385 4 chr7B.!!$F1 2384

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
247 248 0.036388 GTCTGTGCCCGATTTCTGGA 60.036 55.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1934 2161 0.458669 GCCAAATAGGTCCTCGTCGA 59.541 55.0 0.0 0.0 40.61 4.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 9.561069 CTAATTTTCTACATAGCATAAGGTGGT 57.439 33.333 0.00 0.00 42.23 4.16
55 56 9.914834 ATTTTCTACATAGCATAAGGTGGTAAA 57.085 29.630 0.00 0.00 43.43 2.01
72 73 9.942850 AGGTGGTAAAAGAAATATTTTCATTGG 57.057 29.630 1.43 0.00 34.35 3.16
119 120 9.288124 TGAATCGTGTATTTCTTTATTGCATTG 57.712 29.630 0.00 0.00 0.00 2.82
122 123 7.995289 TCGTGTATTTCTTTATTGCATTGGAT 58.005 30.769 0.00 0.00 0.00 3.41
139 140 8.849168 TGCATTGGATTAGAATTAGTGTATTGG 58.151 33.333 0.00 0.00 0.00 3.16
143 144 8.096621 TGGATTAGAATTAGTGTATTGGGTGA 57.903 34.615 0.00 0.00 0.00 4.02
206 207 9.865321 AAAAATCATATGTGAGATTTGTCCAAG 57.135 29.630 1.90 0.00 42.02 3.61
207 208 8.812513 AAATCATATGTGAGATTTGTCCAAGA 57.187 30.769 1.90 0.00 41.48 3.02
208 209 8.447924 AATCATATGTGAGATTTGTCCAAGAG 57.552 34.615 1.90 0.00 37.87 2.85
209 210 7.186570 TCATATGTGAGATTTGTCCAAGAGA 57.813 36.000 1.90 0.00 0.00 3.10
210 211 7.623630 TCATATGTGAGATTTGTCCAAGAGAA 58.376 34.615 1.90 0.00 0.00 2.87
211 212 7.550551 TCATATGTGAGATTTGTCCAAGAGAAC 59.449 37.037 1.90 0.00 0.00 3.01
212 213 5.296151 TGTGAGATTTGTCCAAGAGAACT 57.704 39.130 0.00 0.00 0.00 3.01
213 214 5.059161 TGTGAGATTTGTCCAAGAGAACTG 58.941 41.667 0.00 0.00 0.00 3.16
214 215 4.067896 TGAGATTTGTCCAAGAGAACTGC 58.932 43.478 0.00 0.00 0.00 4.40
215 216 4.202398 TGAGATTTGTCCAAGAGAACTGCT 60.202 41.667 0.00 0.00 0.00 4.24
216 217 5.012046 TGAGATTTGTCCAAGAGAACTGCTA 59.988 40.000 0.00 0.00 0.00 3.49
217 218 5.241662 AGATTTGTCCAAGAGAACTGCTAC 58.758 41.667 0.00 0.00 0.00 3.58
218 219 4.415881 TTTGTCCAAGAGAACTGCTACA 57.584 40.909 0.00 0.00 0.00 2.74
219 220 3.386768 TGTCCAAGAGAACTGCTACAC 57.613 47.619 0.00 0.00 0.00 2.90
220 221 2.698274 TGTCCAAGAGAACTGCTACACA 59.302 45.455 0.00 0.00 0.00 3.72
221 222 3.133901 TGTCCAAGAGAACTGCTACACAA 59.866 43.478 0.00 0.00 0.00 3.33
222 223 4.127171 GTCCAAGAGAACTGCTACACAAA 58.873 43.478 0.00 0.00 0.00 2.83
223 224 4.757149 GTCCAAGAGAACTGCTACACAAAT 59.243 41.667 0.00 0.00 0.00 2.32
224 225 4.756642 TCCAAGAGAACTGCTACACAAATG 59.243 41.667 0.00 0.00 0.00 2.32
225 226 4.756642 CCAAGAGAACTGCTACACAAATGA 59.243 41.667 0.00 0.00 0.00 2.57
226 227 5.413833 CCAAGAGAACTGCTACACAAATGAT 59.586 40.000 0.00 0.00 0.00 2.45
227 228 6.312487 CAAGAGAACTGCTACACAAATGATG 58.688 40.000 0.00 0.00 0.00 3.07
228 229 4.940046 AGAGAACTGCTACACAAATGATGG 59.060 41.667 0.00 0.00 0.00 3.51
229 230 4.655963 AGAACTGCTACACAAATGATGGT 58.344 39.130 0.00 0.00 0.00 3.55
230 231 4.697352 AGAACTGCTACACAAATGATGGTC 59.303 41.667 0.00 0.00 0.00 4.02
231 232 4.292186 ACTGCTACACAAATGATGGTCT 57.708 40.909 0.00 0.00 0.00 3.85
232 233 4.005650 ACTGCTACACAAATGATGGTCTG 58.994 43.478 0.00 0.00 0.00 3.51
233 234 4.005650 CTGCTACACAAATGATGGTCTGT 58.994 43.478 0.00 0.00 0.00 3.41
234 235 3.752747 TGCTACACAAATGATGGTCTGTG 59.247 43.478 0.00 0.00 43.81 3.66
235 236 3.426695 GCTACACAAATGATGGTCTGTGC 60.427 47.826 1.14 0.00 42.33 4.57
236 237 1.888512 ACACAAATGATGGTCTGTGCC 59.111 47.619 1.14 0.00 42.33 5.01
237 238 1.203052 CACAAATGATGGTCTGTGCCC 59.797 52.381 0.00 0.00 33.41 5.36
238 239 0.452987 CAAATGATGGTCTGTGCCCG 59.547 55.000 0.00 0.00 0.00 6.13
239 240 0.327924 AAATGATGGTCTGTGCCCGA 59.672 50.000 0.00 0.00 0.00 5.14
240 241 0.548031 AATGATGGTCTGTGCCCGAT 59.452 50.000 0.00 0.00 0.00 4.18
241 242 0.548031 ATGATGGTCTGTGCCCGATT 59.452 50.000 0.00 0.00 0.00 3.34
242 243 0.327924 TGATGGTCTGTGCCCGATTT 59.672 50.000 0.00 0.00 0.00 2.17
243 244 1.017387 GATGGTCTGTGCCCGATTTC 58.983 55.000 0.00 0.00 0.00 2.17
244 245 0.620556 ATGGTCTGTGCCCGATTTCT 59.379 50.000 0.00 0.00 0.00 2.52
245 246 0.321564 TGGTCTGTGCCCGATTTCTG 60.322 55.000 0.00 0.00 0.00 3.02
246 247 1.026718 GGTCTGTGCCCGATTTCTGG 61.027 60.000 0.00 0.00 0.00 3.86
247 248 0.036388 GTCTGTGCCCGATTTCTGGA 60.036 55.000 0.00 0.00 0.00 3.86
248 249 0.911769 TCTGTGCCCGATTTCTGGAT 59.088 50.000 0.00 0.00 0.00 3.41
249 250 1.019673 CTGTGCCCGATTTCTGGATG 58.980 55.000 0.00 0.00 0.00 3.51
250 251 0.617935 TGTGCCCGATTTCTGGATGA 59.382 50.000 0.00 0.00 0.00 2.92
251 252 1.017387 GTGCCCGATTTCTGGATGAC 58.983 55.000 0.00 0.00 0.00 3.06
252 253 0.617935 TGCCCGATTTCTGGATGACA 59.382 50.000 0.00 0.00 0.00 3.58
253 254 1.004161 TGCCCGATTTCTGGATGACAA 59.996 47.619 0.00 0.00 0.00 3.18
254 255 1.672881 GCCCGATTTCTGGATGACAAG 59.327 52.381 0.00 0.00 0.00 3.16
255 256 2.680805 GCCCGATTTCTGGATGACAAGA 60.681 50.000 0.00 0.00 0.00 3.02
256 257 3.813443 CCCGATTTCTGGATGACAAGAT 58.187 45.455 0.00 0.00 0.00 2.40
257 258 4.743651 GCCCGATTTCTGGATGACAAGATA 60.744 45.833 0.00 0.00 0.00 1.98
258 259 5.555017 CCCGATTTCTGGATGACAAGATAT 58.445 41.667 0.00 0.00 0.00 1.63
259 260 6.701340 CCCGATTTCTGGATGACAAGATATA 58.299 40.000 0.00 0.00 0.00 0.86
260 261 6.815641 CCCGATTTCTGGATGACAAGATATAG 59.184 42.308 0.00 0.00 0.00 1.31
261 262 6.312426 CCGATTTCTGGATGACAAGATATAGC 59.688 42.308 0.00 0.00 0.00 2.97
262 263 6.870439 CGATTTCTGGATGACAAGATATAGCA 59.130 38.462 0.00 0.00 0.00 3.49
263 264 7.386025 CGATTTCTGGATGACAAGATATAGCAA 59.614 37.037 0.00 0.00 0.00 3.91
264 265 7.792374 TTTCTGGATGACAAGATATAGCAAC 57.208 36.000 0.00 0.00 0.00 4.17
265 266 5.858381 TCTGGATGACAAGATATAGCAACC 58.142 41.667 0.00 0.00 0.00 3.77
266 267 5.366477 TCTGGATGACAAGATATAGCAACCA 59.634 40.000 0.00 0.00 31.80 3.67
267 268 6.043590 TCTGGATGACAAGATATAGCAACCAT 59.956 38.462 0.00 0.00 32.19 3.55
268 269 6.233434 TGGATGACAAGATATAGCAACCATC 58.767 40.000 0.00 0.00 0.00 3.51
269 270 5.349817 GGATGACAAGATATAGCAACCATCG 59.650 44.000 0.00 0.00 31.41 3.84
270 271 5.529581 TGACAAGATATAGCAACCATCGA 57.470 39.130 0.00 0.00 0.00 3.59
271 272 6.101650 TGACAAGATATAGCAACCATCGAT 57.898 37.500 0.00 0.00 0.00 3.59
272 273 6.159293 TGACAAGATATAGCAACCATCGATC 58.841 40.000 0.00 0.00 0.00 3.69
273 274 6.101650 ACAAGATATAGCAACCATCGATCA 57.898 37.500 0.00 0.00 0.00 2.92
274 275 5.928839 ACAAGATATAGCAACCATCGATCAC 59.071 40.000 0.00 0.00 0.00 3.06
275 276 5.991933 AGATATAGCAACCATCGATCACT 57.008 39.130 0.00 0.00 0.00 3.41
276 277 6.352016 AGATATAGCAACCATCGATCACTT 57.648 37.500 0.00 0.00 0.00 3.16
277 278 6.162079 AGATATAGCAACCATCGATCACTTG 58.838 40.000 0.00 0.00 0.00 3.16
278 279 2.768253 AGCAACCATCGATCACTTGA 57.232 45.000 0.00 0.00 0.00 3.02
279 280 2.625737 AGCAACCATCGATCACTTGAG 58.374 47.619 0.00 0.00 0.00 3.02
280 281 2.027745 AGCAACCATCGATCACTTGAGT 60.028 45.455 0.00 0.00 0.00 3.41
281 282 2.744202 GCAACCATCGATCACTTGAGTT 59.256 45.455 0.00 0.00 0.00 3.01
282 283 3.189287 GCAACCATCGATCACTTGAGTTT 59.811 43.478 0.00 0.00 0.00 2.66
283 284 4.391830 GCAACCATCGATCACTTGAGTTTA 59.608 41.667 0.00 0.00 0.00 2.01
284 285 5.106712 GCAACCATCGATCACTTGAGTTTAA 60.107 40.000 0.00 0.00 0.00 1.52
285 286 6.307155 CAACCATCGATCACTTGAGTTTAAC 58.693 40.000 0.00 0.00 0.00 2.01
286 287 5.794894 ACCATCGATCACTTGAGTTTAACT 58.205 37.500 0.00 0.00 0.00 2.24
287 288 5.639506 ACCATCGATCACTTGAGTTTAACTG 59.360 40.000 0.93 0.00 0.00 3.16
288 289 5.063944 CCATCGATCACTTGAGTTTAACTGG 59.936 44.000 0.93 0.00 0.00 4.00
289 290 4.566004 TCGATCACTTGAGTTTAACTGGG 58.434 43.478 0.93 0.00 0.00 4.45
290 291 3.125316 CGATCACTTGAGTTTAACTGGGC 59.875 47.826 0.93 0.00 0.00 5.36
291 292 3.857157 TCACTTGAGTTTAACTGGGCT 57.143 42.857 0.93 0.00 0.00 5.19
292 293 3.476552 TCACTTGAGTTTAACTGGGCTG 58.523 45.455 0.93 0.00 0.00 4.85
293 294 2.030805 CACTTGAGTTTAACTGGGCTGC 60.031 50.000 0.93 0.00 0.00 5.25
294 295 2.229792 CTTGAGTTTAACTGGGCTGCA 58.770 47.619 0.93 0.00 0.00 4.41
295 296 1.896220 TGAGTTTAACTGGGCTGCAG 58.104 50.000 10.11 10.11 0.00 4.41
296 297 0.523519 GAGTTTAACTGGGCTGCAGC 59.476 55.000 30.88 30.88 41.14 5.25
306 307 3.117372 GCTGCAGCCATCCATCAC 58.883 61.111 28.76 0.00 34.31 3.06
307 308 1.751544 GCTGCAGCCATCCATCACA 60.752 57.895 28.76 0.00 34.31 3.58
308 309 1.317431 GCTGCAGCCATCCATCACAA 61.317 55.000 28.76 0.00 34.31 3.33
309 310 0.738975 CTGCAGCCATCCATCACAAG 59.261 55.000 0.00 0.00 0.00 3.16
310 311 0.681887 TGCAGCCATCCATCACAAGG 60.682 55.000 0.00 0.00 0.00 3.61
311 312 0.682209 GCAGCCATCCATCACAAGGT 60.682 55.000 0.00 0.00 0.00 3.50
312 313 1.386533 CAGCCATCCATCACAAGGTC 58.613 55.000 0.00 0.00 0.00 3.85
313 314 0.107508 AGCCATCCATCACAAGGTCG 60.108 55.000 0.00 0.00 0.00 4.79
314 315 0.392998 GCCATCCATCACAAGGTCGT 60.393 55.000 0.00 0.00 0.00 4.34
315 316 1.656652 CCATCCATCACAAGGTCGTC 58.343 55.000 0.00 0.00 0.00 4.20
316 317 1.280982 CATCCATCACAAGGTCGTCG 58.719 55.000 0.00 0.00 0.00 5.12
317 318 0.175760 ATCCATCACAAGGTCGTCGG 59.824 55.000 0.00 0.00 0.00 4.79
318 319 2.100631 CCATCACAAGGTCGTCGGC 61.101 63.158 0.00 0.00 0.00 5.54
319 320 1.374125 CATCACAAGGTCGTCGGCA 60.374 57.895 0.00 0.00 0.00 5.69
320 321 1.374252 ATCACAAGGTCGTCGGCAC 60.374 57.895 0.00 0.00 0.00 5.01
321 322 2.094757 ATCACAAGGTCGTCGGCACA 62.095 55.000 0.00 0.00 0.00 4.57
322 323 2.279918 ACAAGGTCGTCGGCACAC 60.280 61.111 0.00 0.00 0.00 3.82
323 324 2.279851 CAAGGTCGTCGGCACACA 60.280 61.111 0.00 0.00 0.00 3.72
324 325 2.029073 AAGGTCGTCGGCACACAG 59.971 61.111 0.00 0.00 0.00 3.66
325 326 2.792947 AAGGTCGTCGGCACACAGT 61.793 57.895 0.00 0.00 0.00 3.55
326 327 2.694829 AAGGTCGTCGGCACACAGTC 62.695 60.000 0.00 0.00 0.00 3.51
327 328 2.335369 GTCGTCGGCACACAGTCT 59.665 61.111 0.00 0.00 0.00 3.24
328 329 1.299926 GTCGTCGGCACACAGTCTT 60.300 57.895 0.00 0.00 0.00 3.01
329 330 0.874607 GTCGTCGGCACACAGTCTTT 60.875 55.000 0.00 0.00 0.00 2.52
330 331 0.596600 TCGTCGGCACACAGTCTTTC 60.597 55.000 0.00 0.00 0.00 2.62
331 332 0.874175 CGTCGGCACACAGTCTTTCA 60.874 55.000 0.00 0.00 0.00 2.69
332 333 1.295792 GTCGGCACACAGTCTTTCAA 58.704 50.000 0.00 0.00 0.00 2.69
333 334 1.668751 GTCGGCACACAGTCTTTCAAA 59.331 47.619 0.00 0.00 0.00 2.69
334 335 2.096819 GTCGGCACACAGTCTTTCAAAA 59.903 45.455 0.00 0.00 0.00 2.44
335 336 2.948979 TCGGCACACAGTCTTTCAAAAT 59.051 40.909 0.00 0.00 0.00 1.82
336 337 3.044986 CGGCACACAGTCTTTCAAAATG 58.955 45.455 0.00 0.00 0.00 2.32
337 338 2.796593 GGCACACAGTCTTTCAAAATGC 59.203 45.455 0.00 0.00 0.00 3.56
338 339 2.796593 GCACACAGTCTTTCAAAATGCC 59.203 45.455 0.00 0.00 0.00 4.40
339 340 3.737663 GCACACAGTCTTTCAAAATGCCA 60.738 43.478 0.00 0.00 0.00 4.92
340 341 4.624015 CACACAGTCTTTCAAAATGCCAT 58.376 39.130 0.00 0.00 0.00 4.40
341 342 4.446385 CACACAGTCTTTCAAAATGCCATG 59.554 41.667 0.00 0.00 0.00 3.66
342 343 4.099881 ACACAGTCTTTCAAAATGCCATGT 59.900 37.500 0.00 0.00 0.00 3.21
343 344 5.051816 CACAGTCTTTCAAAATGCCATGTT 58.948 37.500 0.00 0.00 0.00 2.71
344 345 5.524646 CACAGTCTTTCAAAATGCCATGTTT 59.475 36.000 0.00 0.00 0.00 2.83
345 346 6.700960 CACAGTCTTTCAAAATGCCATGTTTA 59.299 34.615 0.00 0.00 0.00 2.01
346 347 6.925165 ACAGTCTTTCAAAATGCCATGTTTAG 59.075 34.615 0.00 0.00 0.00 1.85
347 348 7.147312 CAGTCTTTCAAAATGCCATGTTTAGA 58.853 34.615 0.00 0.00 0.00 2.10
348 349 7.327761 CAGTCTTTCAAAATGCCATGTTTAGAG 59.672 37.037 0.00 0.00 0.00 2.43
349 350 7.014615 AGTCTTTCAAAATGCCATGTTTAGAGT 59.985 33.333 0.00 0.00 0.00 3.24
350 351 8.296713 GTCTTTCAAAATGCCATGTTTAGAGTA 58.703 33.333 0.00 0.00 0.00 2.59
351 352 8.855110 TCTTTCAAAATGCCATGTTTAGAGTAA 58.145 29.630 0.00 0.00 0.00 2.24
352 353 9.643693 CTTTCAAAATGCCATGTTTAGAGTAAT 57.356 29.630 0.00 0.00 0.00 1.89
353 354 9.995003 TTTCAAAATGCCATGTTTAGAGTAATT 57.005 25.926 0.00 0.00 0.00 1.40
354 355 9.995003 TTCAAAATGCCATGTTTAGAGTAATTT 57.005 25.926 0.00 0.00 0.00 1.82
355 356 9.638239 TCAAAATGCCATGTTTAGAGTAATTTC 57.362 29.630 0.00 0.00 0.00 2.17
356 357 8.586273 CAAAATGCCATGTTTAGAGTAATTTCG 58.414 33.333 0.00 0.00 0.00 3.46
357 358 7.391148 AATGCCATGTTTAGAGTAATTTCGT 57.609 32.000 0.00 0.00 0.00 3.85
358 359 6.811253 TGCCATGTTTAGAGTAATTTCGTT 57.189 33.333 0.00 0.00 0.00 3.85
359 360 7.209471 TGCCATGTTTAGAGTAATTTCGTTT 57.791 32.000 0.00 0.00 0.00 3.60
360 361 7.081349 TGCCATGTTTAGAGTAATTTCGTTTG 58.919 34.615 0.00 0.00 0.00 2.93
361 362 7.081976 GCCATGTTTAGAGTAATTTCGTTTGT 58.918 34.615 0.00 0.00 0.00 2.83
362 363 7.270579 GCCATGTTTAGAGTAATTTCGTTTGTC 59.729 37.037 0.00 0.00 0.00 3.18
390 391 6.489675 GTGCAACTATAATGATCTGTTGGTG 58.510 40.000 9.56 0.00 38.57 4.17
462 501 5.871834 TGTTTTAGGTGTGCTAAGTATGGT 58.128 37.500 0.00 0.00 0.00 3.55
463 502 6.300703 TGTTTTAGGTGTGCTAAGTATGGTT 58.699 36.000 0.00 0.00 0.00 3.67
464 503 6.205853 TGTTTTAGGTGTGCTAAGTATGGTTG 59.794 38.462 0.00 0.00 0.00 3.77
466 505 3.674997 AGGTGTGCTAAGTATGGTTGTG 58.325 45.455 0.00 0.00 0.00 3.33
467 506 3.072476 AGGTGTGCTAAGTATGGTTGTGT 59.928 43.478 0.00 0.00 0.00 3.72
683 726 2.411290 CGCTCGCCTCTCTTCCTC 59.589 66.667 0.00 0.00 0.00 3.71
691 734 1.206849 GCCTCTCTTCCTCTTCCACAG 59.793 57.143 0.00 0.00 0.00 3.66
692 735 1.206849 CCTCTCTTCCTCTTCCACAGC 59.793 57.143 0.00 0.00 0.00 4.40
693 736 1.206849 CTCTCTTCCTCTTCCACAGCC 59.793 57.143 0.00 0.00 0.00 4.85
694 737 0.979665 CTCTTCCTCTTCCACAGCCA 59.020 55.000 0.00 0.00 0.00 4.75
695 738 0.687354 TCTTCCTCTTCCACAGCCAC 59.313 55.000 0.00 0.00 0.00 5.01
696 739 0.671781 CTTCCTCTTCCACAGCCACG 60.672 60.000 0.00 0.00 0.00 4.94
697 740 2.731691 TTCCTCTTCCACAGCCACGC 62.732 60.000 0.00 0.00 0.00 5.34
698 741 3.114616 CTCTTCCACAGCCACGCG 61.115 66.667 3.53 3.53 0.00 6.01
713 756 4.443266 GCGCGCCTCTCTTCCACT 62.443 66.667 23.24 0.00 0.00 4.00
714 757 3.064987 GCGCGCCTCTCTTCCACTA 62.065 63.158 23.24 0.00 0.00 2.74
715 758 1.226717 CGCGCCTCTCTTCCACTAC 60.227 63.158 0.00 0.00 0.00 2.73
716 759 1.142097 GCGCCTCTCTTCCACTACC 59.858 63.158 0.00 0.00 0.00 3.18
717 760 1.605058 GCGCCTCTCTTCCACTACCA 61.605 60.000 0.00 0.00 0.00 3.25
736 829 0.039035 ACGCTCACCTCTCTTCCTCT 59.961 55.000 0.00 0.00 0.00 3.69
740 879 2.813907 CTCACCTCTCTTCCTCTTCCA 58.186 52.381 0.00 0.00 0.00 3.53
750 889 2.345244 CTCTTCCACTGCCACGCT 59.655 61.111 0.00 0.00 0.00 5.07
760 899 4.443266 GCCACGCTCGCCTCTCTT 62.443 66.667 0.00 0.00 0.00 2.85
761 900 2.202676 CCACGCTCGCCTCTCTTC 60.203 66.667 0.00 0.00 0.00 2.87
768 917 1.762708 CTCGCCTCTCTTCCTCTTCT 58.237 55.000 0.00 0.00 0.00 2.85
779 928 2.357881 CTCTTCTGCTGCCACGCA 60.358 61.111 0.00 0.00 38.40 5.24
1015 1170 1.698165 GCAGATGAACTTCGACGACA 58.302 50.000 0.00 0.00 0.00 4.35
1368 1526 0.253894 TCGATACCTCGGACCAGACA 59.746 55.000 0.00 0.00 45.10 3.41
1468 1649 6.111382 TGTCGTTGCACTATCTAGTAGTAGT 58.889 40.000 4.51 2.41 41.73 2.73
1699 1925 1.421382 AAGTAGTTTTTAGCGCGCGA 58.579 45.000 37.18 19.65 0.00 5.87
1732 1959 2.503356 CCTGTGGAGATGCTCTAAGGTT 59.497 50.000 0.00 0.00 0.00 3.50
1738 1965 4.278669 TGGAGATGCTCTAAGGTTACGATC 59.721 45.833 0.00 0.00 0.00 3.69
1739 1966 4.521256 GGAGATGCTCTAAGGTTACGATCT 59.479 45.833 0.00 0.00 0.00 2.75
1740 1967 5.446143 AGATGCTCTAAGGTTACGATCTG 57.554 43.478 0.00 0.00 0.00 2.90
1741 1968 4.890581 AGATGCTCTAAGGTTACGATCTGT 59.109 41.667 0.00 0.00 0.00 3.41
1742 1969 5.361285 AGATGCTCTAAGGTTACGATCTGTT 59.639 40.000 0.00 0.00 0.00 3.16
1743 1970 5.401531 TGCTCTAAGGTTACGATCTGTTT 57.598 39.130 0.00 0.00 0.00 2.83
1744 1971 6.519679 TGCTCTAAGGTTACGATCTGTTTA 57.480 37.500 0.00 0.00 0.00 2.01
1745 1972 6.927416 TGCTCTAAGGTTACGATCTGTTTAA 58.073 36.000 0.00 0.00 0.00 1.52
1746 1973 7.033791 TGCTCTAAGGTTACGATCTGTTTAAG 58.966 38.462 0.00 0.00 0.00 1.85
1747 1974 7.034397 GCTCTAAGGTTACGATCTGTTTAAGT 58.966 38.462 0.00 0.00 0.00 2.24
1748 1975 8.186821 GCTCTAAGGTTACGATCTGTTTAAGTA 58.813 37.037 0.00 0.00 0.00 2.24
1749 1976 9.500864 CTCTAAGGTTACGATCTGTTTAAGTAC 57.499 37.037 0.00 0.00 0.00 2.73
1750 1977 9.013229 TCTAAGGTTACGATCTGTTTAAGTACA 57.987 33.333 0.00 0.00 0.00 2.90
1751 1978 9.630098 CTAAGGTTACGATCTGTTTAAGTACAA 57.370 33.333 0.00 0.00 0.00 2.41
1753 1980 9.498176 AAGGTTACGATCTGTTTAAGTACAATT 57.502 29.630 0.00 0.00 0.00 2.32
1788 2015 9.154632 ACAATAGATGTGATATGGTTAGGTACA 57.845 33.333 0.00 0.00 41.93 2.90
1789 2016 9.645059 CAATAGATGTGATATGGTTAGGTACAG 57.355 37.037 0.00 0.00 0.00 2.74
1790 2017 9.601810 AATAGATGTGATATGGTTAGGTACAGA 57.398 33.333 0.00 0.00 0.00 3.41
1791 2018 7.914427 AGATGTGATATGGTTAGGTACAGAA 57.086 36.000 0.00 0.00 0.00 3.02
1792 2019 8.319057 AGATGTGATATGGTTAGGTACAGAAA 57.681 34.615 0.00 0.00 0.00 2.52
1793 2020 8.938883 AGATGTGATATGGTTAGGTACAGAAAT 58.061 33.333 0.00 0.00 0.00 2.17
1794 2021 9.209175 GATGTGATATGGTTAGGTACAGAAATC 57.791 37.037 0.00 0.00 0.00 2.17
1795 2022 8.319057 TGTGATATGGTTAGGTACAGAAATCT 57.681 34.615 0.00 0.00 0.00 2.40
1796 2023 8.421784 TGTGATATGGTTAGGTACAGAAATCTC 58.578 37.037 0.00 0.00 0.00 2.75
1797 2024 8.421784 GTGATATGGTTAGGTACAGAAATCTCA 58.578 37.037 0.00 0.00 0.00 3.27
1798 2025 8.988060 TGATATGGTTAGGTACAGAAATCTCAA 58.012 33.333 0.00 0.00 0.00 3.02
1799 2026 9.482627 GATATGGTTAGGTACAGAAATCTCAAG 57.517 37.037 0.00 0.00 0.00 3.02
1800 2027 6.049955 TGGTTAGGTACAGAAATCTCAAGG 57.950 41.667 0.00 0.00 0.00 3.61
1801 2028 5.045869 TGGTTAGGTACAGAAATCTCAAGGG 60.046 44.000 0.00 0.00 0.00 3.95
1802 2029 5.045797 GGTTAGGTACAGAAATCTCAAGGGT 60.046 44.000 0.00 0.00 0.00 4.34
1803 2030 4.559862 AGGTACAGAAATCTCAAGGGTG 57.440 45.455 0.00 0.00 0.00 4.61
1804 2031 3.910627 AGGTACAGAAATCTCAAGGGTGT 59.089 43.478 0.00 0.00 0.00 4.16
1805 2032 4.003648 GGTACAGAAATCTCAAGGGTGTG 58.996 47.826 0.00 0.00 0.00 3.82
1806 2033 3.146104 ACAGAAATCTCAAGGGTGTGG 57.854 47.619 0.00 0.00 0.00 4.17
1807 2034 2.443255 ACAGAAATCTCAAGGGTGTGGT 59.557 45.455 0.00 0.00 0.00 4.16
1808 2035 3.650942 ACAGAAATCTCAAGGGTGTGGTA 59.349 43.478 0.00 0.00 0.00 3.25
1809 2036 4.289672 ACAGAAATCTCAAGGGTGTGGTAT 59.710 41.667 0.00 0.00 0.00 2.73
1810 2037 5.487488 ACAGAAATCTCAAGGGTGTGGTATA 59.513 40.000 0.00 0.00 0.00 1.47
1811 2038 6.158695 ACAGAAATCTCAAGGGTGTGGTATAT 59.841 38.462 0.00 0.00 0.00 0.86
1812 2039 7.056635 CAGAAATCTCAAGGGTGTGGTATATT 58.943 38.462 0.00 0.00 0.00 1.28
1813 2040 7.557719 CAGAAATCTCAAGGGTGTGGTATATTT 59.442 37.037 0.00 0.00 0.00 1.40
1814 2041 8.778059 AGAAATCTCAAGGGTGTGGTATATTTA 58.222 33.333 0.00 0.00 0.00 1.40
1815 2042 8.980481 AAATCTCAAGGGTGTGGTATATTTAG 57.020 34.615 0.00 0.00 0.00 1.85
1816 2043 6.494666 TCTCAAGGGTGTGGTATATTTAGG 57.505 41.667 0.00 0.00 0.00 2.69
1817 2044 5.968167 TCTCAAGGGTGTGGTATATTTAGGT 59.032 40.000 0.00 0.00 0.00 3.08
1818 2045 7.134162 TCTCAAGGGTGTGGTATATTTAGGTA 58.866 38.462 0.00 0.00 0.00 3.08
1819 2046 7.070322 TCTCAAGGGTGTGGTATATTTAGGTAC 59.930 40.741 0.00 0.00 0.00 3.34
1820 2047 5.796424 AGGGTGTGGTATATTTAGGTACG 57.204 43.478 0.00 0.00 0.00 3.67
1821 2048 4.590222 AGGGTGTGGTATATTTAGGTACGG 59.410 45.833 0.00 0.00 0.00 4.02
1822 2049 4.344968 GGGTGTGGTATATTTAGGTACGGT 59.655 45.833 0.00 0.00 0.00 4.83
1823 2050 5.163311 GGGTGTGGTATATTTAGGTACGGTT 60.163 44.000 0.00 0.00 0.00 4.44
1824 2051 6.348498 GGTGTGGTATATTTAGGTACGGTTT 58.652 40.000 0.00 0.00 0.00 3.27
1825 2052 6.823182 GGTGTGGTATATTTAGGTACGGTTTT 59.177 38.462 0.00 0.00 0.00 2.43
1826 2053 7.336679 GGTGTGGTATATTTAGGTACGGTTTTT 59.663 37.037 0.00 0.00 0.00 1.94
1827 2054 9.377312 GTGTGGTATATTTAGGTACGGTTTTTA 57.623 33.333 0.00 0.00 0.00 1.52
1828 2055 9.598517 TGTGGTATATTTAGGTACGGTTTTTAG 57.401 33.333 0.00 0.00 0.00 1.85
1829 2056 9.816354 GTGGTATATTTAGGTACGGTTTTTAGA 57.184 33.333 0.00 0.00 0.00 2.10
1836 2063 7.867445 TTAGGTACGGTTTTTAGAACTAACG 57.133 36.000 0.00 0.00 0.00 3.18
1837 2064 5.230182 AGGTACGGTTTTTAGAACTAACGG 58.770 41.667 0.00 0.00 0.00 4.44
1838 2065 4.988540 GGTACGGTTTTTAGAACTAACGGT 59.011 41.667 0.00 0.00 38.39 4.83
1839 2066 5.465390 GGTACGGTTTTTAGAACTAACGGTT 59.535 40.000 0.00 0.00 41.40 4.44
1840 2067 6.018262 GGTACGGTTTTTAGAACTAACGGTTT 60.018 38.462 0.00 0.00 38.41 3.27
1841 2068 6.435430 ACGGTTTTTAGAACTAACGGTTTT 57.565 33.333 0.00 0.00 38.41 2.43
1842 2069 6.257423 ACGGTTTTTAGAACTAACGGTTTTG 58.743 36.000 0.00 0.00 38.41 2.44
1843 2070 6.128035 ACGGTTTTTAGAACTAACGGTTTTGT 60.128 34.615 0.00 0.00 38.41 2.83
1844 2071 7.065204 ACGGTTTTTAGAACTAACGGTTTTGTA 59.935 33.333 0.00 0.00 38.41 2.41
1845 2072 7.583762 CGGTTTTTAGAACTAACGGTTTTGTAG 59.416 37.037 0.00 0.00 38.41 2.74
1846 2073 8.611757 GGTTTTTAGAACTAACGGTTTTGTAGA 58.388 33.333 0.00 0.00 38.41 2.59
1847 2074 9.986833 GTTTTTAGAACTAACGGTTTTGTAGAA 57.013 29.630 0.00 0.00 38.41 2.10
1848 2075 9.986833 TTTTTAGAACTAACGGTTTTGTAGAAC 57.013 29.630 0.00 0.00 38.41 3.01
1849 2076 8.947055 TTTAGAACTAACGGTTTTGTAGAACT 57.053 30.769 0.00 0.00 38.41 3.01
1851 2078 7.936950 AGAACTAACGGTTTTGTAGAACTAC 57.063 36.000 0.00 5.18 38.41 2.73
1852 2079 7.491682 AGAACTAACGGTTTTGTAGAACTACA 58.508 34.615 10.14 10.14 40.00 2.74
1853 2080 8.146412 AGAACTAACGGTTTTGTAGAACTACAT 58.854 33.333 14.15 2.36 40.68 2.29
1854 2081 7.880059 ACTAACGGTTTTGTAGAACTACATC 57.120 36.000 14.15 8.77 44.54 3.06
1855 2082 5.834239 AACGGTTTTGTAGAACTACATCG 57.166 39.130 14.15 15.81 44.54 3.84
1856 2083 5.125100 ACGGTTTTGTAGAACTACATCGA 57.875 39.130 14.15 0.00 44.54 3.59
1857 2084 5.717119 ACGGTTTTGTAGAACTACATCGAT 58.283 37.500 14.15 0.00 44.54 3.59
1858 2085 5.575606 ACGGTTTTGTAGAACTACATCGATG 59.424 40.000 23.68 23.68 44.54 3.84
1859 2086 5.500290 CGGTTTTGTAGAACTACATCGATGC 60.500 44.000 25.11 8.53 44.54 3.91
1860 2087 5.220605 GGTTTTGTAGAACTACATCGATGCC 60.221 44.000 25.11 9.02 44.54 4.40
1861 2088 5.339008 TTTGTAGAACTACATCGATGCCT 57.661 39.130 25.11 15.46 44.54 4.75
1862 2089 6.459670 TTTGTAGAACTACATCGATGCCTA 57.540 37.500 25.11 14.56 44.54 3.93
1863 2090 6.650427 TTGTAGAACTACATCGATGCCTAT 57.350 37.500 25.11 9.55 44.54 2.57
1864 2091 6.650427 TGTAGAACTACATCGATGCCTATT 57.350 37.500 25.11 13.96 40.77 1.73
1865 2092 7.050970 TGTAGAACTACATCGATGCCTATTT 57.949 36.000 25.11 11.16 40.77 1.40
1866 2093 7.497595 TGTAGAACTACATCGATGCCTATTTT 58.502 34.615 25.11 11.76 40.77 1.82
1867 2094 7.985184 TGTAGAACTACATCGATGCCTATTTTT 59.015 33.333 25.11 9.21 40.77 1.94
1890 2117 8.801715 TTTTTAGATTGTCTTGCACATTTCTC 57.198 30.769 0.00 0.00 33.90 2.87
1891 2118 7.750229 TTTAGATTGTCTTGCACATTTCTCT 57.250 32.000 0.00 0.00 33.90 3.10
1892 2119 7.750229 TTAGATTGTCTTGCACATTTCTCTT 57.250 32.000 0.00 0.00 33.90 2.85
1893 2120 6.645790 AGATTGTCTTGCACATTTCTCTTT 57.354 33.333 0.00 0.00 33.90 2.52
1894 2121 7.047460 AGATTGTCTTGCACATTTCTCTTTT 57.953 32.000 0.00 0.00 33.90 2.27
1895 2122 7.495055 AGATTGTCTTGCACATTTCTCTTTTT 58.505 30.769 0.00 0.00 33.90 1.94
1936 2163 5.990408 AGACTTTTCACTTGCAAATAGTCG 58.010 37.500 0.00 0.00 0.00 4.18
1937 2164 5.758296 AGACTTTTCACTTGCAAATAGTCGA 59.242 36.000 0.00 0.00 0.00 4.20
1938 2165 5.748592 ACTTTTCACTTGCAAATAGTCGAC 58.251 37.500 7.70 7.70 0.00 4.20
1939 2166 4.383774 TTTCACTTGCAAATAGTCGACG 57.616 40.909 10.46 0.00 0.00 5.12
1940 2167 3.291809 TCACTTGCAAATAGTCGACGA 57.708 42.857 10.46 5.12 0.00 4.20
1941 2168 3.242518 TCACTTGCAAATAGTCGACGAG 58.757 45.455 10.46 0.76 0.00 4.18
1942 2169 2.345641 CACTTGCAAATAGTCGACGAGG 59.654 50.000 10.46 0.24 0.00 4.63
1943 2170 2.230508 ACTTGCAAATAGTCGACGAGGA 59.769 45.455 10.46 0.00 0.00 3.71
1944 2171 2.273370 TGCAAATAGTCGACGAGGAC 57.727 50.000 10.46 0.25 37.19 3.85
1945 2172 1.135199 TGCAAATAGTCGACGAGGACC 60.135 52.381 10.46 0.00 37.66 4.46
1946 2173 1.134560 GCAAATAGTCGACGAGGACCT 59.865 52.381 10.46 0.00 37.66 3.85
1947 2174 2.357009 GCAAATAGTCGACGAGGACCTA 59.643 50.000 10.46 0.00 37.66 3.08
1948 2175 3.004524 GCAAATAGTCGACGAGGACCTAT 59.995 47.826 10.46 0.00 37.66 2.57
1949 2176 4.499357 GCAAATAGTCGACGAGGACCTATT 60.499 45.833 10.46 10.88 37.66 1.73
1950 2177 5.589192 CAAATAGTCGACGAGGACCTATTT 58.411 41.667 18.30 18.30 37.66 1.40
1951 2178 4.832590 ATAGTCGACGAGGACCTATTTG 57.167 45.455 10.46 0.00 37.66 2.32
1952 2179 1.749634 AGTCGACGAGGACCTATTTGG 59.250 52.381 10.46 0.00 37.66 3.28
1953 2180 0.458669 TCGACGAGGACCTATTTGGC 59.541 55.000 0.00 0.00 40.22 4.52
1954 2181 0.460311 CGACGAGGACCTATTTGGCT 59.540 55.000 0.00 0.00 40.22 4.75
1955 2182 1.679680 CGACGAGGACCTATTTGGCTA 59.320 52.381 0.00 0.00 40.22 3.93
1956 2183 2.296471 CGACGAGGACCTATTTGGCTAT 59.704 50.000 0.00 0.00 40.22 2.97
1957 2184 3.243771 CGACGAGGACCTATTTGGCTATT 60.244 47.826 0.00 0.00 40.22 1.73
1958 2185 4.704965 GACGAGGACCTATTTGGCTATTT 58.295 43.478 0.00 0.00 40.22 1.40
1959 2186 5.112129 ACGAGGACCTATTTGGCTATTTT 57.888 39.130 0.00 0.00 40.22 1.82
1960 2187 6.243216 ACGAGGACCTATTTGGCTATTTTA 57.757 37.500 0.00 0.00 40.22 1.52
1961 2188 6.655930 ACGAGGACCTATTTGGCTATTTTAA 58.344 36.000 0.00 0.00 40.22 1.52
1962 2189 7.114095 ACGAGGACCTATTTGGCTATTTTAAA 58.886 34.615 0.00 0.00 40.22 1.52
1963 2190 7.282450 ACGAGGACCTATTTGGCTATTTTAAAG 59.718 37.037 0.00 0.00 40.22 1.85
1964 2191 7.348080 AGGACCTATTTGGCTATTTTAAAGC 57.652 36.000 0.00 0.00 40.22 3.51
1982 2209 2.697431 GCCAACAGCGAACATAACAA 57.303 45.000 0.00 0.00 0.00 2.83
1983 2210 2.584791 GCCAACAGCGAACATAACAAG 58.415 47.619 0.00 0.00 0.00 3.16
1984 2211 2.584791 CCAACAGCGAACATAACAAGC 58.415 47.619 0.00 0.00 0.00 4.01
1985 2212 2.031245 CCAACAGCGAACATAACAAGCA 60.031 45.455 0.00 0.00 0.00 3.91
1986 2213 3.549827 CCAACAGCGAACATAACAAGCAA 60.550 43.478 0.00 0.00 0.00 3.91
1987 2214 3.980646 ACAGCGAACATAACAAGCAAA 57.019 38.095 0.00 0.00 0.00 3.68
1988 2215 3.628017 ACAGCGAACATAACAAGCAAAC 58.372 40.909 0.00 0.00 0.00 2.93
1989 2216 3.066064 ACAGCGAACATAACAAGCAAACA 59.934 39.130 0.00 0.00 0.00 2.83
1990 2217 3.421888 CAGCGAACATAACAAGCAAACAC 59.578 43.478 0.00 0.00 0.00 3.32
1991 2218 3.066064 AGCGAACATAACAAGCAAACACA 59.934 39.130 0.00 0.00 0.00 3.72
1992 2219 3.980775 GCGAACATAACAAGCAAACACAT 59.019 39.130 0.00 0.00 0.00 3.21
1993 2220 4.143556 GCGAACATAACAAGCAAACACATG 60.144 41.667 0.00 0.00 0.00 3.21
1994 2221 4.975502 CGAACATAACAAGCAAACACATGT 59.024 37.500 0.00 0.00 0.00 3.21
1995 2222 5.108292 CGAACATAACAAGCAAACACATGTG 60.108 40.000 24.25 24.25 0.00 3.21
2050 2277 2.560504 CTGGCATATTTAGGTGACGCA 58.439 47.619 0.00 0.00 0.00 5.24
2073 2300 2.095718 GCCGGAACTTCACAAGTCAATC 60.096 50.000 5.05 0.00 41.91 2.67
2096 2323 2.404559 TCCCGGCAAGGTACAGATTAT 58.595 47.619 0.00 0.00 38.74 1.28
2100 2327 2.801699 CGGCAAGGTACAGATTATGCGA 60.802 50.000 0.00 0.00 34.73 5.10
2101 2328 3.403038 GGCAAGGTACAGATTATGCGAT 58.597 45.455 0.00 0.00 34.73 4.58
2102 2329 4.566004 GGCAAGGTACAGATTATGCGATA 58.434 43.478 0.00 0.00 34.73 2.92
2160 2387 2.560105 GTTCAGCAAAAAGATCTGGGCT 59.440 45.455 0.00 0.06 0.00 5.19
2205 2432 6.407525 GGAGTTTGACTAAGCTGGATCTACAT 60.408 42.308 0.00 0.00 0.00 2.29
2207 2434 8.256356 AGTTTGACTAAGCTGGATCTACATAT 57.744 34.615 0.00 0.00 0.00 1.78
2208 2435 9.368416 AGTTTGACTAAGCTGGATCTACATATA 57.632 33.333 0.00 0.00 0.00 0.86
2209 2436 9.632807 GTTTGACTAAGCTGGATCTACATATAG 57.367 37.037 0.00 0.00 0.00 1.31
2264 2491 1.224315 CGGCCCCATGATGTTGAGA 59.776 57.895 0.00 0.00 0.00 3.27
2347 2574 4.580995 GGTCTCTCTCTCGGTCATTCATAA 59.419 45.833 0.00 0.00 0.00 1.90
2371 2598 0.389391 CGTCAGTCTTGAGGGTGTGT 59.611 55.000 0.00 0.00 35.96 3.72
2385 2612 2.224784 GGGTGTGTGAATGGTACGTTTC 59.775 50.000 0.00 0.00 0.00 2.78
2386 2613 3.135994 GGTGTGTGAATGGTACGTTTCT 58.864 45.455 0.00 0.00 0.00 2.52
2387 2614 3.059188 GGTGTGTGAATGGTACGTTTCTG 60.059 47.826 0.00 0.00 0.00 3.02
2388 2615 2.546368 TGTGTGAATGGTACGTTTCTGC 59.454 45.455 0.00 0.00 0.00 4.26
2389 2616 2.806244 GTGTGAATGGTACGTTTCTGCT 59.194 45.455 0.00 0.00 0.00 4.24
2390 2617 2.805671 TGTGAATGGTACGTTTCTGCTG 59.194 45.455 0.00 0.00 0.00 4.41
2391 2618 3.064207 GTGAATGGTACGTTTCTGCTGA 58.936 45.455 0.00 0.00 0.00 4.26
2392 2619 3.064207 TGAATGGTACGTTTCTGCTGAC 58.936 45.455 0.00 0.00 0.00 3.51
2393 2620 1.710013 ATGGTACGTTTCTGCTGACG 58.290 50.000 0.00 3.74 44.34 4.35
2399 2626 2.452006 CGTTTCTGCTGACGTTTGTT 57.548 45.000 0.00 0.00 34.75 2.83
2400 2627 3.579147 CGTTTCTGCTGACGTTTGTTA 57.421 42.857 0.00 0.00 34.75 2.41
2401 2628 4.128554 CGTTTCTGCTGACGTTTGTTAT 57.871 40.909 0.00 0.00 34.75 1.89
2402 2629 4.523813 CGTTTCTGCTGACGTTTGTTATT 58.476 39.130 0.00 0.00 34.75 1.40
2403 2630 4.607235 CGTTTCTGCTGACGTTTGTTATTC 59.393 41.667 0.00 0.00 34.75 1.75
2404 2631 4.742438 TTCTGCTGACGTTTGTTATTCC 57.258 40.909 0.00 0.00 0.00 3.01
2405 2632 3.734463 TCTGCTGACGTTTGTTATTCCA 58.266 40.909 0.00 0.00 0.00 3.53
2406 2633 4.323417 TCTGCTGACGTTTGTTATTCCAT 58.677 39.130 0.00 0.00 0.00 3.41
2407 2634 5.483811 TCTGCTGACGTTTGTTATTCCATA 58.516 37.500 0.00 0.00 0.00 2.74
2408 2635 6.112734 TCTGCTGACGTTTGTTATTCCATAT 58.887 36.000 0.00 0.00 0.00 1.78
2409 2636 7.269316 TCTGCTGACGTTTGTTATTCCATATA 58.731 34.615 0.00 0.00 0.00 0.86
2410 2637 7.931407 TCTGCTGACGTTTGTTATTCCATATAT 59.069 33.333 0.00 0.00 0.00 0.86
2411 2638 7.860613 TGCTGACGTTTGTTATTCCATATATG 58.139 34.615 5.68 5.68 0.00 1.78
2412 2639 7.497579 TGCTGACGTTTGTTATTCCATATATGT 59.502 33.333 11.73 0.00 0.00 2.29
2413 2640 8.342634 GCTGACGTTTGTTATTCCATATATGTT 58.657 33.333 11.73 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.585099 TTAGTACGATCGGTAATGTACAAAATT 57.415 29.630 20.98 0.00 39.63 1.82
12 13 9.454585 TGTAGAAAATTAGTACGATCGGTAATG 57.545 33.333 20.98 0.00 30.91 1.90
18 19 8.723777 TGCTATGTAGAAAATTAGTACGATCG 57.276 34.615 14.88 14.88 0.00 3.69
88 89 9.619316 CAATAAAGAAATACACGATTCAAACCA 57.381 29.630 0.00 0.00 0.00 3.67
119 120 7.661847 CCTCACCCAATACACTAATTCTAATCC 59.338 40.741 0.00 0.00 0.00 3.01
122 123 7.402071 AGTCCTCACCCAATACACTAATTCTAA 59.598 37.037 0.00 0.00 0.00 2.10
125 126 5.990668 AGTCCTCACCCAATACACTAATTC 58.009 41.667 0.00 0.00 0.00 2.17
126 127 7.037873 TGTTAGTCCTCACCCAATACACTAATT 60.038 37.037 0.00 0.00 29.96 1.40
137 138 5.772393 ATAAACATGTTAGTCCTCACCCA 57.228 39.130 12.39 0.00 0.00 4.51
139 140 9.046296 CAAGATATAAACATGTTAGTCCTCACC 57.954 37.037 12.39 0.00 0.00 4.02
182 183 8.812513 TCTTGGACAAATCTCACATATGATTT 57.187 30.769 10.38 2.03 41.75 2.17
183 184 8.270030 TCTCTTGGACAAATCTCACATATGATT 58.730 33.333 10.38 0.00 33.22 2.57
195 196 4.997395 TGTAGCAGTTCTCTTGGACAAATC 59.003 41.667 0.00 0.00 0.00 2.17
202 203 4.756642 TCATTTGTGTAGCAGTTCTCTTGG 59.243 41.667 0.00 0.00 0.00 3.61
203 204 5.929697 TCATTTGTGTAGCAGTTCTCTTG 57.070 39.130 0.00 0.00 0.00 3.02
204 205 5.413833 CCATCATTTGTGTAGCAGTTCTCTT 59.586 40.000 0.00 0.00 0.00 2.85
205 206 4.940046 CCATCATTTGTGTAGCAGTTCTCT 59.060 41.667 0.00 0.00 0.00 3.10
206 207 4.697352 ACCATCATTTGTGTAGCAGTTCTC 59.303 41.667 0.00 0.00 0.00 2.87
207 208 4.655963 ACCATCATTTGTGTAGCAGTTCT 58.344 39.130 0.00 0.00 0.00 3.01
208 209 4.697352 AGACCATCATTTGTGTAGCAGTTC 59.303 41.667 0.00 0.00 0.00 3.01
209 210 4.456911 CAGACCATCATTTGTGTAGCAGTT 59.543 41.667 0.00 0.00 0.00 3.16
210 211 4.005650 CAGACCATCATTTGTGTAGCAGT 58.994 43.478 0.00 0.00 0.00 4.40
211 212 4.005650 ACAGACCATCATTTGTGTAGCAG 58.994 43.478 0.00 0.00 0.00 4.24
212 213 3.752747 CACAGACCATCATTTGTGTAGCA 59.247 43.478 0.00 0.00 36.92 3.49
213 214 3.426695 GCACAGACCATCATTTGTGTAGC 60.427 47.826 5.50 0.00 42.13 3.58
214 215 3.127548 GGCACAGACCATCATTTGTGTAG 59.872 47.826 5.50 0.00 42.13 2.74
215 216 3.081061 GGCACAGACCATCATTTGTGTA 58.919 45.455 5.50 0.00 42.13 2.90
216 217 1.888512 GGCACAGACCATCATTTGTGT 59.111 47.619 5.50 0.00 42.13 3.72
217 218 1.203052 GGGCACAGACCATCATTTGTG 59.797 52.381 0.00 0.00 42.80 3.33
218 219 1.549203 GGGCACAGACCATCATTTGT 58.451 50.000 0.00 0.00 0.00 2.83
219 220 0.452987 CGGGCACAGACCATCATTTG 59.547 55.000 0.00 0.00 0.00 2.32
220 221 0.327924 TCGGGCACAGACCATCATTT 59.672 50.000 0.00 0.00 0.00 2.32
221 222 0.548031 ATCGGGCACAGACCATCATT 59.452 50.000 0.00 0.00 33.98 2.57
222 223 0.548031 AATCGGGCACAGACCATCAT 59.452 50.000 0.00 0.00 33.98 2.45
223 224 0.327924 AAATCGGGCACAGACCATCA 59.672 50.000 0.00 0.00 33.98 3.07
224 225 1.017387 GAAATCGGGCACAGACCATC 58.983 55.000 0.00 0.00 33.98 3.51
225 226 0.620556 AGAAATCGGGCACAGACCAT 59.379 50.000 0.00 0.00 33.98 3.55
226 227 0.321564 CAGAAATCGGGCACAGACCA 60.322 55.000 0.00 0.00 33.98 4.02
227 228 1.026718 CCAGAAATCGGGCACAGACC 61.027 60.000 0.00 0.00 33.98 3.85
228 229 0.036388 TCCAGAAATCGGGCACAGAC 60.036 55.000 0.00 0.00 33.98 3.51
229 230 0.911769 ATCCAGAAATCGGGCACAGA 59.088 50.000 0.00 0.00 36.71 3.41
230 231 1.019673 CATCCAGAAATCGGGCACAG 58.980 55.000 0.00 0.00 0.00 3.66
231 232 0.617935 TCATCCAGAAATCGGGCACA 59.382 50.000 0.00 0.00 0.00 4.57
232 233 1.017387 GTCATCCAGAAATCGGGCAC 58.983 55.000 0.00 0.00 0.00 5.01
233 234 0.617935 TGTCATCCAGAAATCGGGCA 59.382 50.000 0.00 0.00 0.00 5.36
234 235 1.672881 CTTGTCATCCAGAAATCGGGC 59.327 52.381 0.00 0.00 0.00 6.13
235 236 3.266510 TCTTGTCATCCAGAAATCGGG 57.733 47.619 0.00 0.00 0.00 5.14
236 237 6.312426 GCTATATCTTGTCATCCAGAAATCGG 59.688 42.308 0.00 0.00 0.00 4.18
237 238 6.870439 TGCTATATCTTGTCATCCAGAAATCG 59.130 38.462 0.00 0.00 0.00 3.34
238 239 8.502387 GTTGCTATATCTTGTCATCCAGAAATC 58.498 37.037 0.00 0.00 0.00 2.17
239 240 7.446625 GGTTGCTATATCTTGTCATCCAGAAAT 59.553 37.037 0.00 0.00 0.00 2.17
240 241 6.767902 GGTTGCTATATCTTGTCATCCAGAAA 59.232 38.462 0.00 0.00 0.00 2.52
241 242 6.126796 TGGTTGCTATATCTTGTCATCCAGAA 60.127 38.462 0.00 0.00 0.00 3.02
242 243 5.366477 TGGTTGCTATATCTTGTCATCCAGA 59.634 40.000 0.00 0.00 0.00 3.86
243 244 5.614308 TGGTTGCTATATCTTGTCATCCAG 58.386 41.667 0.00 0.00 0.00 3.86
244 245 5.628797 TGGTTGCTATATCTTGTCATCCA 57.371 39.130 0.00 0.00 0.00 3.41
245 246 5.349817 CGATGGTTGCTATATCTTGTCATCC 59.650 44.000 0.00 0.00 0.00 3.51
246 247 6.159293 TCGATGGTTGCTATATCTTGTCATC 58.841 40.000 0.00 0.00 0.00 2.92
247 248 6.101650 TCGATGGTTGCTATATCTTGTCAT 57.898 37.500 0.00 0.00 0.00 3.06
248 249 5.529581 TCGATGGTTGCTATATCTTGTCA 57.470 39.130 0.00 0.00 0.00 3.58
249 250 6.090088 GTGATCGATGGTTGCTATATCTTGTC 59.910 42.308 0.54 0.00 0.00 3.18
250 251 5.928839 GTGATCGATGGTTGCTATATCTTGT 59.071 40.000 0.54 0.00 0.00 3.16
251 252 6.162079 AGTGATCGATGGTTGCTATATCTTG 58.838 40.000 0.54 0.00 0.00 3.02
252 253 6.352016 AGTGATCGATGGTTGCTATATCTT 57.648 37.500 0.54 0.00 0.00 2.40
253 254 5.991933 AGTGATCGATGGTTGCTATATCT 57.008 39.130 0.54 0.00 0.00 1.98
254 255 6.159293 TCAAGTGATCGATGGTTGCTATATC 58.841 40.000 0.54 0.00 0.00 1.63
255 256 6.101650 TCAAGTGATCGATGGTTGCTATAT 57.898 37.500 0.54 0.00 0.00 0.86
256 257 5.069119 ACTCAAGTGATCGATGGTTGCTATA 59.931 40.000 0.54 0.00 0.00 1.31
257 258 4.141846 ACTCAAGTGATCGATGGTTGCTAT 60.142 41.667 0.54 0.00 0.00 2.97
258 259 3.195610 ACTCAAGTGATCGATGGTTGCTA 59.804 43.478 0.54 0.00 0.00 3.49
259 260 2.027745 ACTCAAGTGATCGATGGTTGCT 60.028 45.455 0.54 0.00 0.00 3.91
260 261 2.350522 ACTCAAGTGATCGATGGTTGC 58.649 47.619 0.54 0.00 0.00 4.17
261 262 6.147821 AGTTAAACTCAAGTGATCGATGGTTG 59.852 38.462 0.54 3.59 0.00 3.77
262 263 6.147821 CAGTTAAACTCAAGTGATCGATGGTT 59.852 38.462 0.54 0.00 31.64 3.67
263 264 5.639506 CAGTTAAACTCAAGTGATCGATGGT 59.360 40.000 0.54 0.00 31.64 3.55
264 265 5.063944 CCAGTTAAACTCAAGTGATCGATGG 59.936 44.000 0.54 0.00 31.64 3.51
265 266 5.063944 CCCAGTTAAACTCAAGTGATCGATG 59.936 44.000 0.54 0.00 31.64 3.84
266 267 5.178797 CCCAGTTAAACTCAAGTGATCGAT 58.821 41.667 0.00 0.00 31.64 3.59
267 268 4.566004 CCCAGTTAAACTCAAGTGATCGA 58.434 43.478 0.00 0.00 31.64 3.59
268 269 3.125316 GCCCAGTTAAACTCAAGTGATCG 59.875 47.826 0.00 0.00 31.64 3.69
269 270 4.154918 CAGCCCAGTTAAACTCAAGTGATC 59.845 45.833 0.00 0.00 31.64 2.92
270 271 4.074970 CAGCCCAGTTAAACTCAAGTGAT 58.925 43.478 0.00 0.00 31.64 3.06
271 272 3.476552 CAGCCCAGTTAAACTCAAGTGA 58.523 45.455 0.00 0.00 31.64 3.41
272 273 2.030805 GCAGCCCAGTTAAACTCAAGTG 60.031 50.000 0.00 0.00 0.00 3.16
273 274 2.230660 GCAGCCCAGTTAAACTCAAGT 58.769 47.619 0.00 0.00 0.00 3.16
274 275 2.227388 CTGCAGCCCAGTTAAACTCAAG 59.773 50.000 0.00 0.00 36.79 3.02
275 276 2.229792 CTGCAGCCCAGTTAAACTCAA 58.770 47.619 0.00 0.00 36.79 3.02
276 277 1.896220 CTGCAGCCCAGTTAAACTCA 58.104 50.000 0.00 0.00 36.79 3.41
277 278 0.523519 GCTGCAGCCCAGTTAAACTC 59.476 55.000 28.76 0.00 43.71 3.01
278 279 2.646121 GCTGCAGCCCAGTTAAACT 58.354 52.632 28.76 0.00 43.71 2.66
289 290 1.317431 TTGTGATGGATGGCTGCAGC 61.317 55.000 30.88 30.88 41.14 5.25
290 291 0.738975 CTTGTGATGGATGGCTGCAG 59.261 55.000 10.11 10.11 0.00 4.41
291 292 0.681887 CCTTGTGATGGATGGCTGCA 60.682 55.000 0.50 0.00 0.00 4.41
292 293 0.682209 ACCTTGTGATGGATGGCTGC 60.682 55.000 0.00 0.00 0.00 5.25
293 294 1.386533 GACCTTGTGATGGATGGCTG 58.613 55.000 0.00 0.00 0.00 4.85
294 295 0.107508 CGACCTTGTGATGGATGGCT 60.108 55.000 0.00 0.00 0.00 4.75
295 296 0.392998 ACGACCTTGTGATGGATGGC 60.393 55.000 0.00 0.00 0.00 4.40
296 297 1.656652 GACGACCTTGTGATGGATGG 58.343 55.000 0.00 0.00 0.00 3.51
297 298 1.280982 CGACGACCTTGTGATGGATG 58.719 55.000 0.00 0.00 0.00 3.51
298 299 0.175760 CCGACGACCTTGTGATGGAT 59.824 55.000 0.00 0.00 0.00 3.41
299 300 1.589630 CCGACGACCTTGTGATGGA 59.410 57.895 0.00 0.00 0.00 3.41
300 301 2.100631 GCCGACGACCTTGTGATGG 61.101 63.158 0.00 0.00 0.00 3.51
301 302 1.374125 TGCCGACGACCTTGTGATG 60.374 57.895 0.00 0.00 0.00 3.07
302 303 1.374252 GTGCCGACGACCTTGTGAT 60.374 57.895 0.00 0.00 0.00 3.06
303 304 2.028484 GTGCCGACGACCTTGTGA 59.972 61.111 0.00 0.00 0.00 3.58
304 305 2.279851 TGTGCCGACGACCTTGTG 60.280 61.111 0.00 0.00 0.00 3.33
305 306 2.279918 GTGTGCCGACGACCTTGT 60.280 61.111 0.00 0.00 0.00 3.16
306 307 2.279851 TGTGTGCCGACGACCTTG 60.280 61.111 0.00 0.00 0.00 3.61
307 308 2.029073 CTGTGTGCCGACGACCTT 59.971 61.111 0.00 0.00 0.00 3.50
308 309 3.208884 GACTGTGTGCCGACGACCT 62.209 63.158 0.00 0.00 0.00 3.85
309 310 2.694829 AAGACTGTGTGCCGACGACC 62.695 60.000 0.00 0.00 0.00 4.79
310 311 0.874607 AAAGACTGTGTGCCGACGAC 60.875 55.000 0.00 0.00 0.00 4.34
311 312 0.596600 GAAAGACTGTGTGCCGACGA 60.597 55.000 0.00 0.00 0.00 4.20
312 313 0.874175 TGAAAGACTGTGTGCCGACG 60.874 55.000 0.00 0.00 0.00 5.12
313 314 1.295792 TTGAAAGACTGTGTGCCGAC 58.704 50.000 0.00 0.00 0.00 4.79
314 315 2.031258 TTTGAAAGACTGTGTGCCGA 57.969 45.000 0.00 0.00 0.00 5.54
315 316 2.842208 TTTTGAAAGACTGTGTGCCG 57.158 45.000 0.00 0.00 0.00 5.69
316 317 2.796593 GCATTTTGAAAGACTGTGTGCC 59.203 45.455 0.00 0.00 0.00 5.01
317 318 2.796593 GGCATTTTGAAAGACTGTGTGC 59.203 45.455 0.00 0.00 0.00 4.57
318 319 4.044336 TGGCATTTTGAAAGACTGTGTG 57.956 40.909 0.00 0.00 0.00 3.82
319 320 4.099881 ACATGGCATTTTGAAAGACTGTGT 59.900 37.500 0.00 0.00 0.00 3.72
320 321 4.624015 ACATGGCATTTTGAAAGACTGTG 58.376 39.130 0.00 0.00 0.00 3.66
321 322 4.942761 ACATGGCATTTTGAAAGACTGT 57.057 36.364 0.00 0.00 0.00 3.55
322 323 7.147312 TCTAAACATGGCATTTTGAAAGACTG 58.853 34.615 0.00 0.00 0.00 3.51
323 324 7.014615 ACTCTAAACATGGCATTTTGAAAGACT 59.985 33.333 0.00 0.00 0.00 3.24
324 325 7.147976 ACTCTAAACATGGCATTTTGAAAGAC 58.852 34.615 0.00 0.00 0.00 3.01
325 326 7.288810 ACTCTAAACATGGCATTTTGAAAGA 57.711 32.000 0.00 2.10 0.00 2.52
326 327 9.643693 ATTACTCTAAACATGGCATTTTGAAAG 57.356 29.630 0.00 0.00 0.00 2.62
327 328 9.995003 AATTACTCTAAACATGGCATTTTGAAA 57.005 25.926 0.00 0.00 0.00 2.69
328 329 9.995003 AAATTACTCTAAACATGGCATTTTGAA 57.005 25.926 0.00 0.00 0.00 2.69
329 330 9.638239 GAAATTACTCTAAACATGGCATTTTGA 57.362 29.630 0.00 0.00 0.00 2.69
330 331 8.586273 CGAAATTACTCTAAACATGGCATTTTG 58.414 33.333 0.00 0.00 0.00 2.44
331 332 8.303876 ACGAAATTACTCTAAACATGGCATTTT 58.696 29.630 0.00 5.16 0.00 1.82
332 333 7.826690 ACGAAATTACTCTAAACATGGCATTT 58.173 30.769 0.00 0.00 0.00 2.32
333 334 7.391148 ACGAAATTACTCTAAACATGGCATT 57.609 32.000 0.00 0.00 0.00 3.56
334 335 7.391148 AACGAAATTACTCTAAACATGGCAT 57.609 32.000 0.00 0.00 0.00 4.40
335 336 6.811253 AACGAAATTACTCTAAACATGGCA 57.189 33.333 0.00 0.00 0.00 4.92
336 337 7.081976 ACAAACGAAATTACTCTAAACATGGC 58.918 34.615 0.00 0.00 0.00 4.40
337 338 8.504005 AGACAAACGAAATTACTCTAAACATGG 58.496 33.333 0.00 0.00 0.00 3.66
343 344 8.706035 GCACTTAGACAAACGAAATTACTCTAA 58.294 33.333 0.00 0.00 0.00 2.10
344 345 7.868922 TGCACTTAGACAAACGAAATTACTCTA 59.131 33.333 0.00 0.00 0.00 2.43
345 346 6.704493 TGCACTTAGACAAACGAAATTACTCT 59.296 34.615 0.00 0.00 0.00 3.24
346 347 6.884187 TGCACTTAGACAAACGAAATTACTC 58.116 36.000 0.00 0.00 0.00 2.59
347 348 6.854496 TGCACTTAGACAAACGAAATTACT 57.146 33.333 0.00 0.00 0.00 2.24
348 349 7.130269 AGTTGCACTTAGACAAACGAAATTAC 58.870 34.615 0.00 0.00 0.00 1.89
349 350 7.254227 AGTTGCACTTAGACAAACGAAATTA 57.746 32.000 0.00 0.00 0.00 1.40
350 351 6.131544 AGTTGCACTTAGACAAACGAAATT 57.868 33.333 0.00 0.00 0.00 1.82
351 352 5.751243 AGTTGCACTTAGACAAACGAAAT 57.249 34.783 0.00 0.00 0.00 2.17
352 353 6.854496 ATAGTTGCACTTAGACAAACGAAA 57.146 33.333 0.00 0.00 0.00 3.46
353 354 7.949903 TTATAGTTGCACTTAGACAAACGAA 57.050 32.000 0.00 0.00 0.00 3.85
354 355 7.815549 TCATTATAGTTGCACTTAGACAAACGA 59.184 33.333 0.00 0.00 0.00 3.85
355 356 7.959733 TCATTATAGTTGCACTTAGACAAACG 58.040 34.615 0.00 0.00 0.00 3.60
356 357 9.922305 GATCATTATAGTTGCACTTAGACAAAC 57.078 33.333 0.00 0.00 0.00 2.93
357 358 9.890629 AGATCATTATAGTTGCACTTAGACAAA 57.109 29.630 0.00 0.00 0.00 2.83
358 359 9.317936 CAGATCATTATAGTTGCACTTAGACAA 57.682 33.333 0.00 0.00 0.00 3.18
359 360 8.478066 ACAGATCATTATAGTTGCACTTAGACA 58.522 33.333 0.00 0.00 0.00 3.41
360 361 8.879342 ACAGATCATTATAGTTGCACTTAGAC 57.121 34.615 0.00 0.00 0.00 2.59
361 362 9.317936 CAACAGATCATTATAGTTGCACTTAGA 57.682 33.333 0.00 0.00 34.02 2.10
362 363 8.554528 CCAACAGATCATTATAGTTGCACTTAG 58.445 37.037 0.00 0.00 38.50 2.18
367 368 6.413892 TCACCAACAGATCATTATAGTTGCA 58.586 36.000 0.00 0.00 38.50 4.08
375 376 7.676004 TCTACAAACTCACCAACAGATCATTA 58.324 34.615 0.00 0.00 0.00 1.90
462 501 6.070824 TGTTGGAGATGCTCTAATCTACACAA 60.071 38.462 0.00 0.00 45.34 3.33
463 502 5.422012 TGTTGGAGATGCTCTAATCTACACA 59.578 40.000 0.00 0.00 45.34 3.72
464 503 5.907207 TGTTGGAGATGCTCTAATCTACAC 58.093 41.667 0.00 0.00 45.34 2.90
466 505 4.987912 GCTGTTGGAGATGCTCTAATCTAC 59.012 45.833 0.00 0.00 37.03 2.59
467 506 4.039730 GGCTGTTGGAGATGCTCTAATCTA 59.960 45.833 0.00 0.00 37.03 1.98
515 558 2.173382 CGCGCGCTAAAAACTGCT 59.827 55.556 30.48 0.00 0.00 4.24
516 559 3.523873 GCGCGCGCTAAAAACTGC 61.524 61.111 44.38 18.46 38.26 4.40
600 643 4.678743 ACCTGCCGCCTTTTCCCC 62.679 66.667 0.00 0.00 0.00 4.81
674 717 1.270907 GGCTGTGGAAGAGGAAGAGA 58.729 55.000 0.00 0.00 0.00 3.10
676 719 0.687354 GTGGCTGTGGAAGAGGAAGA 59.313 55.000 0.00 0.00 0.00 2.87
678 721 1.371183 CGTGGCTGTGGAAGAGGAA 59.629 57.895 0.00 0.00 0.00 3.36
679 722 3.059982 CGTGGCTGTGGAAGAGGA 58.940 61.111 0.00 0.00 0.00 3.71
696 739 3.064987 TAGTGGAAGAGAGGCGCGC 62.065 63.158 25.94 25.94 0.00 6.86
697 740 1.226717 GTAGTGGAAGAGAGGCGCG 60.227 63.158 0.00 0.00 0.00 6.86
698 741 1.142097 GGTAGTGGAAGAGAGGCGC 59.858 63.158 0.00 0.00 0.00 6.53
699 742 0.173708 GTGGTAGTGGAAGAGAGGCG 59.826 60.000 0.00 0.00 0.00 5.52
700 743 0.173708 CGTGGTAGTGGAAGAGAGGC 59.826 60.000 0.00 0.00 0.00 4.70
701 744 0.173708 GCGTGGTAGTGGAAGAGAGG 59.826 60.000 0.00 0.00 0.00 3.69
702 745 1.133407 GAGCGTGGTAGTGGAAGAGAG 59.867 57.143 0.00 0.00 0.00 3.20
703 746 1.174783 GAGCGTGGTAGTGGAAGAGA 58.825 55.000 0.00 0.00 0.00 3.10
704 747 0.888619 TGAGCGTGGTAGTGGAAGAG 59.111 55.000 0.00 0.00 0.00 2.85
705 748 0.601558 GTGAGCGTGGTAGTGGAAGA 59.398 55.000 0.00 0.00 0.00 2.87
706 749 0.389948 GGTGAGCGTGGTAGTGGAAG 60.390 60.000 0.00 0.00 0.00 3.46
707 750 0.830444 AGGTGAGCGTGGTAGTGGAA 60.830 55.000 0.00 0.00 0.00 3.53
708 751 1.228769 AGGTGAGCGTGGTAGTGGA 60.229 57.895 0.00 0.00 0.00 4.02
709 752 1.215647 GAGGTGAGCGTGGTAGTGG 59.784 63.158 0.00 0.00 0.00 4.00
710 753 0.171455 GAGAGGTGAGCGTGGTAGTG 59.829 60.000 0.00 0.00 0.00 2.74
711 754 0.038455 AGAGAGGTGAGCGTGGTAGT 59.962 55.000 0.00 0.00 0.00 2.73
712 755 1.133407 GAAGAGAGGTGAGCGTGGTAG 59.867 57.143 0.00 0.00 0.00 3.18
713 756 1.174783 GAAGAGAGGTGAGCGTGGTA 58.825 55.000 0.00 0.00 0.00 3.25
714 757 1.536943 GGAAGAGAGGTGAGCGTGGT 61.537 60.000 0.00 0.00 0.00 4.16
715 758 1.216710 GGAAGAGAGGTGAGCGTGG 59.783 63.158 0.00 0.00 0.00 4.94
716 759 0.172352 GAGGAAGAGAGGTGAGCGTG 59.828 60.000 0.00 0.00 0.00 5.34
717 760 0.039035 AGAGGAAGAGAGGTGAGCGT 59.961 55.000 0.00 0.00 0.00 5.07
750 889 1.468985 CAGAAGAGGAAGAGAGGCGA 58.531 55.000 0.00 0.00 0.00 5.54
757 896 0.322975 GTGGCAGCAGAAGAGGAAGA 59.677 55.000 0.00 0.00 0.00 2.87
758 897 1.018226 CGTGGCAGCAGAAGAGGAAG 61.018 60.000 0.00 0.00 0.00 3.46
759 898 1.004560 CGTGGCAGCAGAAGAGGAA 60.005 57.895 0.00 0.00 0.00 3.36
760 899 2.659016 CGTGGCAGCAGAAGAGGA 59.341 61.111 0.00 0.00 0.00 3.71
761 900 3.123620 GCGTGGCAGCAGAAGAGG 61.124 66.667 0.00 0.00 37.05 3.69
1015 1170 2.267006 CTGCTGGAGCGTGTGGAT 59.733 61.111 0.00 0.00 45.83 3.41
1283 1440 1.994916 CCCACCATTTTGAACGATGC 58.005 50.000 0.00 0.00 0.00 3.91
1368 1526 2.786495 ATCGTCGCCATCCTCGCTT 61.786 57.895 0.00 0.00 0.00 4.68
1683 1909 1.697770 CGTCGCGCGCTAAAAACTA 59.302 52.632 30.48 0.15 0.00 2.24
1762 1989 9.154632 TGTACCTAACCATATCACATCTATTGT 57.845 33.333 0.00 0.00 39.91 2.71
1763 1990 9.645059 CTGTACCTAACCATATCACATCTATTG 57.355 37.037 0.00 0.00 0.00 1.90
1764 1991 9.601810 TCTGTACCTAACCATATCACATCTATT 57.398 33.333 0.00 0.00 0.00 1.73
1765 1992 9.601810 TTCTGTACCTAACCATATCACATCTAT 57.398 33.333 0.00 0.00 0.00 1.98
1766 1993 9.429109 TTTCTGTACCTAACCATATCACATCTA 57.571 33.333 0.00 0.00 0.00 1.98
1767 1994 7.914427 TTCTGTACCTAACCATATCACATCT 57.086 36.000 0.00 0.00 0.00 2.90
1768 1995 9.209175 GATTTCTGTACCTAACCATATCACATC 57.791 37.037 0.00 0.00 0.00 3.06
1769 1996 8.938883 AGATTTCTGTACCTAACCATATCACAT 58.061 33.333 0.00 0.00 0.00 3.21
1770 1997 8.319057 AGATTTCTGTACCTAACCATATCACA 57.681 34.615 0.00 0.00 0.00 3.58
1771 1998 8.421784 TGAGATTTCTGTACCTAACCATATCAC 58.578 37.037 0.00 0.00 0.00 3.06
1772 1999 8.547481 TGAGATTTCTGTACCTAACCATATCA 57.453 34.615 0.00 0.00 0.00 2.15
1773 2000 9.482627 CTTGAGATTTCTGTACCTAACCATATC 57.517 37.037 0.00 0.00 0.00 1.63
1774 2001 8.432805 CCTTGAGATTTCTGTACCTAACCATAT 58.567 37.037 0.00 0.00 0.00 1.78
1775 2002 7.147549 CCCTTGAGATTTCTGTACCTAACCATA 60.148 40.741 0.00 0.00 0.00 2.74
1776 2003 6.353082 CCCTTGAGATTTCTGTACCTAACCAT 60.353 42.308 0.00 0.00 0.00 3.55
1777 2004 5.045869 CCCTTGAGATTTCTGTACCTAACCA 60.046 44.000 0.00 0.00 0.00 3.67
1778 2005 5.045797 ACCCTTGAGATTTCTGTACCTAACC 60.046 44.000 0.00 0.00 0.00 2.85
1779 2006 5.875359 CACCCTTGAGATTTCTGTACCTAAC 59.125 44.000 0.00 0.00 0.00 2.34
1780 2007 5.546499 ACACCCTTGAGATTTCTGTACCTAA 59.454 40.000 0.00 0.00 0.00 2.69
1781 2008 5.046591 CACACCCTTGAGATTTCTGTACCTA 60.047 44.000 0.00 0.00 0.00 3.08
1782 2009 3.910627 ACACCCTTGAGATTTCTGTACCT 59.089 43.478 0.00 0.00 0.00 3.08
1783 2010 4.003648 CACACCCTTGAGATTTCTGTACC 58.996 47.826 0.00 0.00 0.00 3.34
1784 2011 4.003648 CCACACCCTTGAGATTTCTGTAC 58.996 47.826 0.00 0.00 0.00 2.90
1785 2012 3.650942 ACCACACCCTTGAGATTTCTGTA 59.349 43.478 0.00 0.00 0.00 2.74
1786 2013 2.443255 ACCACACCCTTGAGATTTCTGT 59.557 45.455 0.00 0.00 0.00 3.41
1787 2014 3.146104 ACCACACCCTTGAGATTTCTG 57.854 47.619 0.00 0.00 0.00 3.02
1788 2015 6.831664 ATATACCACACCCTTGAGATTTCT 57.168 37.500 0.00 0.00 0.00 2.52
1789 2016 7.881775 AAATATACCACACCCTTGAGATTTC 57.118 36.000 0.00 0.00 0.00 2.17
1790 2017 7.998964 CCTAAATATACCACACCCTTGAGATTT 59.001 37.037 0.00 0.00 0.00 2.17
1791 2018 7.128883 ACCTAAATATACCACACCCTTGAGATT 59.871 37.037 0.00 0.00 0.00 2.40
1792 2019 6.619852 ACCTAAATATACCACACCCTTGAGAT 59.380 38.462 0.00 0.00 0.00 2.75
1793 2020 5.968167 ACCTAAATATACCACACCCTTGAGA 59.032 40.000 0.00 0.00 0.00 3.27
1794 2021 6.248569 ACCTAAATATACCACACCCTTGAG 57.751 41.667 0.00 0.00 0.00 3.02
1795 2022 6.183360 CGTACCTAAATATACCACACCCTTGA 60.183 42.308 0.00 0.00 0.00 3.02
1796 2023 5.987347 CGTACCTAAATATACCACACCCTTG 59.013 44.000 0.00 0.00 0.00 3.61
1797 2024 5.070847 CCGTACCTAAATATACCACACCCTT 59.929 44.000 0.00 0.00 0.00 3.95
1798 2025 4.590222 CCGTACCTAAATATACCACACCCT 59.410 45.833 0.00 0.00 0.00 4.34
1799 2026 4.344968 ACCGTACCTAAATATACCACACCC 59.655 45.833 0.00 0.00 0.00 4.61
1800 2027 5.535753 ACCGTACCTAAATATACCACACC 57.464 43.478 0.00 0.00 0.00 4.16
1801 2028 7.848223 AAAACCGTACCTAAATATACCACAC 57.152 36.000 0.00 0.00 0.00 3.82
1802 2029 9.598517 CTAAAAACCGTACCTAAATATACCACA 57.401 33.333 0.00 0.00 0.00 4.17
1803 2030 9.816354 TCTAAAAACCGTACCTAAATATACCAC 57.184 33.333 0.00 0.00 0.00 4.16
1810 2037 8.925700 CGTTAGTTCTAAAAACCGTACCTAAAT 58.074 33.333 0.00 0.00 0.00 1.40
1811 2038 7.383843 CCGTTAGTTCTAAAAACCGTACCTAAA 59.616 37.037 0.00 0.00 0.00 1.85
1812 2039 6.866248 CCGTTAGTTCTAAAAACCGTACCTAA 59.134 38.462 0.00 0.00 0.00 2.69
1813 2040 6.015772 ACCGTTAGTTCTAAAAACCGTACCTA 60.016 38.462 0.00 0.00 0.00 3.08
1814 2041 5.221441 ACCGTTAGTTCTAAAAACCGTACCT 60.221 40.000 0.00 0.00 0.00 3.08
1815 2042 4.988540 ACCGTTAGTTCTAAAAACCGTACC 59.011 41.667 0.00 0.00 0.00 3.34
1816 2043 6.525121 AACCGTTAGTTCTAAAAACCGTAC 57.475 37.500 0.00 0.00 30.99 3.67
1817 2044 7.065204 ACAAAACCGTTAGTTCTAAAAACCGTA 59.935 33.333 0.00 0.00 37.88 4.02
1818 2045 6.128035 ACAAAACCGTTAGTTCTAAAAACCGT 60.128 34.615 0.00 0.00 37.88 4.83
1819 2046 6.257423 ACAAAACCGTTAGTTCTAAAAACCG 58.743 36.000 0.00 0.00 37.88 4.44
1820 2047 8.611757 TCTACAAAACCGTTAGTTCTAAAAACC 58.388 33.333 0.00 0.00 37.88 3.27
1821 2048 9.986833 TTCTACAAAACCGTTAGTTCTAAAAAC 57.013 29.630 0.00 0.00 37.88 2.43
1822 2049 9.986833 GTTCTACAAAACCGTTAGTTCTAAAAA 57.013 29.630 0.00 0.00 37.88 1.94
1823 2050 9.382275 AGTTCTACAAAACCGTTAGTTCTAAAA 57.618 29.630 0.00 0.00 37.88 1.52
1824 2051 8.947055 AGTTCTACAAAACCGTTAGTTCTAAA 57.053 30.769 0.00 0.00 37.88 1.85
1825 2052 9.463443 GTAGTTCTACAAAACCGTTAGTTCTAA 57.537 33.333 5.26 0.00 37.88 2.10
1826 2053 8.629158 TGTAGTTCTACAAAACCGTTAGTTCTA 58.371 33.333 9.81 0.00 37.88 2.10
1827 2054 7.491682 TGTAGTTCTACAAAACCGTTAGTTCT 58.508 34.615 9.81 0.00 37.88 3.01
1828 2055 7.698836 TGTAGTTCTACAAAACCGTTAGTTC 57.301 36.000 9.81 0.00 37.88 3.01
1829 2056 7.115378 CGATGTAGTTCTACAAAACCGTTAGTT 59.885 37.037 15.16 0.00 41.81 2.24
1830 2057 6.583806 CGATGTAGTTCTACAAAACCGTTAGT 59.416 38.462 15.16 0.00 33.21 2.24
1831 2058 6.803320 TCGATGTAGTTCTACAAAACCGTTAG 59.197 38.462 15.16 0.66 33.21 2.34
1832 2059 6.676950 TCGATGTAGTTCTACAAAACCGTTA 58.323 36.000 15.16 2.55 33.21 3.18
1833 2060 5.531634 TCGATGTAGTTCTACAAAACCGTT 58.468 37.500 15.16 0.00 33.21 4.44
1834 2061 5.125100 TCGATGTAGTTCTACAAAACCGT 57.875 39.130 15.16 0.00 33.21 4.83
1835 2062 5.500290 GCATCGATGTAGTTCTACAAAACCG 60.500 44.000 25.47 14.79 33.21 4.44
1836 2063 5.220605 GGCATCGATGTAGTTCTACAAAACC 60.221 44.000 25.47 9.80 33.21 3.27
1837 2064 5.581085 AGGCATCGATGTAGTTCTACAAAAC 59.419 40.000 25.47 4.50 33.21 2.43
1838 2065 5.730550 AGGCATCGATGTAGTTCTACAAAA 58.269 37.500 25.47 5.96 33.21 2.44
1839 2066 5.339008 AGGCATCGATGTAGTTCTACAAA 57.661 39.130 25.47 6.26 33.21 2.83
1840 2067 6.650427 ATAGGCATCGATGTAGTTCTACAA 57.350 37.500 25.47 1.84 33.21 2.41
1841 2068 6.650427 AATAGGCATCGATGTAGTTCTACA 57.350 37.500 25.47 13.85 0.00 2.74
1842 2069 7.948278 AAAATAGGCATCGATGTAGTTCTAC 57.052 36.000 25.47 7.02 0.00 2.59
1865 2092 8.632679 AGAGAAATGTGCAAGACAATCTAAAAA 58.367 29.630 0.00 0.00 38.36 1.94
1866 2093 8.169977 AGAGAAATGTGCAAGACAATCTAAAA 57.830 30.769 0.00 0.00 38.36 1.52
1867 2094 7.750229 AGAGAAATGTGCAAGACAATCTAAA 57.250 32.000 0.00 0.00 38.36 1.85
1868 2095 7.750229 AAGAGAAATGTGCAAGACAATCTAA 57.250 32.000 0.00 0.00 38.36 2.10
1869 2096 7.750229 AAAGAGAAATGTGCAAGACAATCTA 57.250 32.000 0.00 0.00 38.36 1.98
1870 2097 6.645790 AAAGAGAAATGTGCAAGACAATCT 57.354 33.333 0.00 0.00 38.36 2.40
1871 2098 7.704789 AAAAAGAGAAATGTGCAAGACAATC 57.295 32.000 0.00 0.00 38.36 2.67
1910 2137 8.230486 CGACTATTTGCAAGTGAAAAGTCTATT 58.770 33.333 16.09 0.00 0.00 1.73
1911 2138 7.602644 TCGACTATTTGCAAGTGAAAAGTCTAT 59.397 33.333 16.09 0.55 0.00 1.98
1912 2139 6.926826 TCGACTATTTGCAAGTGAAAAGTCTA 59.073 34.615 16.09 6.80 0.00 2.59
1913 2140 5.758296 TCGACTATTTGCAAGTGAAAAGTCT 59.242 36.000 16.09 0.00 0.00 3.24
1914 2141 5.846473 GTCGACTATTTGCAAGTGAAAAGTC 59.154 40.000 8.70 8.37 0.00 3.01
1915 2142 5.558273 CGTCGACTATTTGCAAGTGAAAAGT 60.558 40.000 14.70 0.00 0.00 2.66
1916 2143 4.840772 CGTCGACTATTTGCAAGTGAAAAG 59.159 41.667 14.70 0.00 0.00 2.27
1917 2144 4.508492 TCGTCGACTATTTGCAAGTGAAAA 59.492 37.500 14.70 0.00 0.00 2.29
1918 2145 4.052608 TCGTCGACTATTTGCAAGTGAAA 58.947 39.130 14.70 0.00 0.00 2.69
1919 2146 3.644823 TCGTCGACTATTTGCAAGTGAA 58.355 40.909 14.70 0.00 0.00 3.18
1920 2147 3.242518 CTCGTCGACTATTTGCAAGTGA 58.757 45.455 14.70 0.00 0.00 3.41
1921 2148 2.345641 CCTCGTCGACTATTTGCAAGTG 59.654 50.000 14.70 0.00 0.00 3.16
1922 2149 2.230508 TCCTCGTCGACTATTTGCAAGT 59.769 45.455 14.70 0.00 0.00 3.16
1923 2150 2.599082 GTCCTCGTCGACTATTTGCAAG 59.401 50.000 14.70 0.00 0.00 4.01
1924 2151 2.602878 GTCCTCGTCGACTATTTGCAA 58.397 47.619 14.70 0.00 0.00 4.08
1925 2152 1.135199 GGTCCTCGTCGACTATTTGCA 60.135 52.381 14.70 0.00 33.07 4.08
1926 2153 1.134560 AGGTCCTCGTCGACTATTTGC 59.865 52.381 14.70 0.00 33.07 3.68
1927 2154 4.832590 ATAGGTCCTCGTCGACTATTTG 57.167 45.455 14.70 0.00 33.07 2.32
1928 2155 5.451520 CCAAATAGGTCCTCGTCGACTATTT 60.452 44.000 14.70 16.74 32.45 1.40
1929 2156 4.037684 CCAAATAGGTCCTCGTCGACTATT 59.962 45.833 14.70 6.11 33.07 1.73
1930 2157 3.568853 CCAAATAGGTCCTCGTCGACTAT 59.431 47.826 14.70 0.00 33.07 2.12
1931 2158 2.947652 CCAAATAGGTCCTCGTCGACTA 59.052 50.000 14.70 0.95 33.07 2.59
1932 2159 1.749634 CCAAATAGGTCCTCGTCGACT 59.250 52.381 14.70 0.00 33.07 4.18
1933 2160 1.801765 GCCAAATAGGTCCTCGTCGAC 60.802 57.143 5.18 5.18 40.61 4.20
1934 2161 0.458669 GCCAAATAGGTCCTCGTCGA 59.541 55.000 0.00 0.00 40.61 4.20
1935 2162 0.460311 AGCCAAATAGGTCCTCGTCG 59.540 55.000 0.00 0.00 40.61 5.12
1936 2163 4.338379 AATAGCCAAATAGGTCCTCGTC 57.662 45.455 0.00 0.00 40.61 4.20
1937 2164 4.772886 AAATAGCCAAATAGGTCCTCGT 57.227 40.909 0.00 0.00 40.61 4.18
1938 2165 7.562454 TTTAAAATAGCCAAATAGGTCCTCG 57.438 36.000 0.00 0.00 40.61 4.63
1939 2166 7.426410 GCTTTAAAATAGCCAAATAGGTCCTC 58.574 38.462 0.00 0.00 40.61 3.71
1940 2167 7.348080 GCTTTAAAATAGCCAAATAGGTCCT 57.652 36.000 0.00 0.00 40.61 3.85
1952 2179 4.091453 TCGCTGTTGGCTTTAAAATAGC 57.909 40.909 0.00 0.00 37.22 2.97
1953 2180 5.457140 TGTTCGCTGTTGGCTTTAAAATAG 58.543 37.500 0.00 0.00 39.13 1.73
1954 2181 5.440234 TGTTCGCTGTTGGCTTTAAAATA 57.560 34.783 0.00 0.00 39.13 1.40
1955 2182 4.314740 TGTTCGCTGTTGGCTTTAAAAT 57.685 36.364 0.00 0.00 39.13 1.82
1956 2183 3.784701 TGTTCGCTGTTGGCTTTAAAA 57.215 38.095 0.00 0.00 39.13 1.52
1957 2184 5.216648 GTTATGTTCGCTGTTGGCTTTAAA 58.783 37.500 0.00 0.00 39.13 1.52
1958 2185 4.276183 TGTTATGTTCGCTGTTGGCTTTAA 59.724 37.500 0.00 0.00 39.13 1.52
1959 2186 3.815962 TGTTATGTTCGCTGTTGGCTTTA 59.184 39.130 0.00 0.00 39.13 1.85
1960 2187 2.621055 TGTTATGTTCGCTGTTGGCTTT 59.379 40.909 0.00 0.00 39.13 3.51
1961 2188 2.226330 TGTTATGTTCGCTGTTGGCTT 58.774 42.857 0.00 0.00 39.13 4.35
1962 2189 1.890876 TGTTATGTTCGCTGTTGGCT 58.109 45.000 0.00 0.00 39.13 4.75
1963 2190 2.584791 CTTGTTATGTTCGCTGTTGGC 58.415 47.619 0.00 0.00 37.64 4.52
1964 2191 2.031245 TGCTTGTTATGTTCGCTGTTGG 60.031 45.455 0.00 0.00 0.00 3.77
1965 2192 3.266541 TGCTTGTTATGTTCGCTGTTG 57.733 42.857 0.00 0.00 0.00 3.33
1966 2193 3.980646 TTGCTTGTTATGTTCGCTGTT 57.019 38.095 0.00 0.00 0.00 3.16
1967 2194 3.066064 TGTTTGCTTGTTATGTTCGCTGT 59.934 39.130 0.00 0.00 0.00 4.40
1968 2195 3.421888 GTGTTTGCTTGTTATGTTCGCTG 59.578 43.478 0.00 0.00 0.00 5.18
1969 2196 3.066064 TGTGTTTGCTTGTTATGTTCGCT 59.934 39.130 0.00 0.00 0.00 4.93
1970 2197 3.367607 TGTGTTTGCTTGTTATGTTCGC 58.632 40.909 0.00 0.00 0.00 4.70
1971 2198 4.975502 ACATGTGTTTGCTTGTTATGTTCG 59.024 37.500 0.00 0.00 0.00 3.95
1972 2199 5.748152 ACACATGTGTTTGCTTGTTATGTTC 59.252 36.000 25.76 0.00 41.83 3.18
1973 2200 5.659463 ACACATGTGTTTGCTTGTTATGTT 58.341 33.333 25.76 0.00 41.83 2.71
1974 2201 5.261209 ACACATGTGTTTGCTTGTTATGT 57.739 34.783 25.76 0.00 41.83 2.29
2032 2259 2.287009 GCTTGCGTCACCTAAATATGCC 60.287 50.000 0.00 0.00 0.00 4.40
2033 2260 2.287009 GGCTTGCGTCACCTAAATATGC 60.287 50.000 0.00 0.00 0.00 3.14
2050 2277 1.134220 TGACTTGTGAAGTTCCGGCTT 60.134 47.619 0.00 0.00 43.03 4.35
2096 2323 2.425668 TGCTACTTGTGCTAGTATCGCA 59.574 45.455 0.00 4.57 32.58 5.10
2133 2360 2.045561 TCTTTTTGCTGAACCGGTCA 57.954 45.000 8.04 7.09 34.17 4.02
2138 2365 2.353109 GCCCAGATCTTTTTGCTGAACC 60.353 50.000 0.00 0.00 0.00 3.62
2160 2387 5.939883 ACTCCAGTTTCATTCGATTTGATCA 59.060 36.000 0.00 0.00 0.00 2.92
2264 2491 1.911357 TCAGTCAACAGAGCCCATCAT 59.089 47.619 0.00 0.00 0.00 2.45
2289 2516 7.555914 ACCCACATAGAAAATTTTGCAACTTTT 59.444 29.630 8.47 15.31 0.00 2.27
2371 2598 3.064207 GTCAGCAGAAACGTACCATTCA 58.936 45.455 7.73 0.00 0.00 2.57
2385 2612 4.685169 ATGGAATAACAAACGTCAGCAG 57.315 40.909 0.00 0.00 0.00 4.24
2386 2613 7.497579 ACATATATGGAATAACAAACGTCAGCA 59.502 33.333 16.96 0.00 29.06 4.41
2387 2614 7.861630 ACATATATGGAATAACAAACGTCAGC 58.138 34.615 16.96 0.00 29.06 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.