Multiple sequence alignment - TraesCS7D01G333600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G333600 chr7D 100.000 8975 0 0 1 8975 425036336 425045310 0.000000e+00 16574.0
1 TraesCS7D01G333600 chr7D 91.365 1494 71 31 4378 5842 618089456 618090920 0.000000e+00 1991.0
2 TraesCS7D01G333600 chr7D 91.254 1212 67 14 3199 4392 618086721 618087911 0.000000e+00 1615.0
3 TraesCS7D01G333600 chr7D 88.519 1141 74 23 5843 6955 618092320 618093431 0.000000e+00 1328.0
4 TraesCS7D01G333600 chr7D 90.156 1026 63 13 7439 8441 618093877 618094887 0.000000e+00 1301.0
5 TraesCS7D01G333600 chr7D 88.910 532 22 11 1100 1621 618085310 618085814 9.900000e-174 621.0
6 TraesCS7D01G333600 chr7D 90.981 377 25 5 2730 3097 618086409 618086785 4.840000e-137 499.0
7 TraesCS7D01G333600 chr7D 88.957 326 29 6 7118 7440 618093485 618093806 6.530000e-106 396.0
8 TraesCS7D01G333600 chr7D 93.427 213 9 2 1824 2031 618085806 618086018 2.430000e-80 311.0
9 TraesCS7D01G333600 chr7D 96.341 82 3 0 3242 3323 425039453 425039534 1.570000e-27 135.0
10 TraesCS7D01G333600 chr7D 96.341 82 3 0 3118 3199 425039577 425039658 1.570000e-27 135.0
11 TraesCS7D01G333600 chr7D 86.992 123 11 5 8854 8975 416148698 416148580 5.650000e-27 134.0
12 TraesCS7D01G333600 chr7D 93.976 83 4 1 3118 3199 618086764 618086846 3.400000e-24 124.0
13 TraesCS7D01G333600 chr7D 98.462 65 1 0 3199 3263 425039368 425039432 2.050000e-21 115.0
14 TraesCS7D01G333600 chr7D 98.462 65 1 0 3033 3097 425039534 425039598 2.050000e-21 115.0
15 TraesCS7D01G333600 chr7D 97.872 47 1 0 2137 2183 618086355 618086401 2.080000e-11 82.4
16 TraesCS7D01G333600 chr7B 94.070 2597 84 17 2443 5006 443076351 443078910 0.000000e+00 3879.0
17 TraesCS7D01G333600 chr7B 95.081 2460 86 20 1 2444 443073876 443076316 0.000000e+00 3840.0
18 TraesCS7D01G333600 chr7B 92.234 2395 124 26 3242 5598 712470472 712472842 0.000000e+00 3336.0
19 TraesCS7D01G333600 chr7B 87.683 1502 80 32 963 2444 712468361 712469777 0.000000e+00 1652.0
20 TraesCS7D01G333600 chr7B 92.929 990 30 12 7545 8511 443082088 443083060 0.000000e+00 1404.0
21 TraesCS7D01G333600 chr7B 89.716 1021 74 13 7439 8441 712481279 712482286 0.000000e+00 1275.0
22 TraesCS7D01G333600 chr7B 86.884 1136 89 20 5843 6955 712477387 712478485 0.000000e+00 1218.0
23 TraesCS7D01G333600 chr7B 90.933 761 42 10 5843 6583 443079860 443080613 0.000000e+00 998.0
24 TraesCS7D01G333600 chr7B 90.470 766 40 12 2443 3199 712469813 712470554 0.000000e+00 979.0
25 TraesCS7D01G333600 chr7B 94.424 556 27 2 5062 5617 443078911 443079462 0.000000e+00 852.0
26 TraesCS7D01G333600 chr7B 94.766 535 23 3 7018 7549 443081031 443081563 0.000000e+00 828.0
27 TraesCS7D01G333600 chr7B 86.345 249 18 11 8732 8975 443083184 443083421 3.220000e-64 257.0
28 TraesCS7D01G333600 chr7B 94.904 157 8 0 6656 6812 443080671 443080827 6.960000e-61 246.0
29 TraesCS7D01G333600 chr7B 89.697 165 13 3 7276 7440 712481090 712481250 3.280000e-49 207.0
30 TraesCS7D01G333600 chr7B 91.034 145 10 2 6811 6955 443080910 443081051 9.200000e-45 193.0
31 TraesCS7D01G333600 chr7B 97.222 108 3 0 8556 8663 443083060 443083167 5.530000e-42 183.0
32 TraesCS7D01G333600 chr7B 91.525 118 7 3 3085 3199 443077118 443077235 9.330000e-35 159.0
33 TraesCS7D01G333600 chr7B 97.674 86 2 0 3033 3118 443077090 443077175 2.020000e-31 148.0
34 TraesCS7D01G333600 chr7B 97.561 82 2 0 3242 3323 443077009 443077090 3.380000e-29 141.0
35 TraesCS7D01G333600 chr7B 98.462 65 0 1 3199 3263 443076946 443077009 7.360000e-21 113.0
36 TraesCS7D01G333600 chr7B 96.923 65 2 0 3199 3263 712470408 712470472 9.530000e-20 110.0
37 TraesCS7D01G333600 chr7A 92.020 2406 134 26 3242 5598 711817006 711819402 0.000000e+00 3326.0
38 TraesCS7D01G333600 chr7A 86.387 1976 205 36 3254 5182 507878575 507876617 0.000000e+00 2100.0
39 TraesCS7D01G333600 chr7A 86.613 1479 135 23 283 1710 507881516 507880050 0.000000e+00 1576.0
40 TraesCS7D01G333600 chr7A 87.619 1365 65 35 1103 2444 711815026 711816309 0.000000e+00 1489.0
41 TraesCS7D01G333600 chr7A 89.903 1030 72 10 7421 8427 507874572 507873552 0.000000e+00 1297.0
42 TraesCS7D01G333600 chr7A 82.421 1553 153 59 1715 3199 507880005 507878505 0.000000e+00 1245.0
43 TraesCS7D01G333600 chr7A 91.759 898 46 17 7439 8323 711827739 711828621 0.000000e+00 1223.0
44 TraesCS7D01G333600 chr7A 87.859 1079 81 25 5910 6955 711826211 711827272 0.000000e+00 1221.0
45 TraesCS7D01G333600 chr7A 91.088 763 33 10 2446 3199 711816352 711817088 0.000000e+00 1000.0
46 TraesCS7D01G333600 chr7A 85.548 429 42 9 7018 7440 711827252 711827666 1.790000e-116 431.0
47 TraesCS7D01G333600 chr7A 85.874 269 33 4 1809 2075 47920719 47920984 1.910000e-71 281.0
48 TraesCS7D01G333600 chr7A 88.235 221 21 4 5577 5796 711825594 711825810 8.940000e-65 259.0
49 TraesCS7D01G333600 chr7A 92.216 167 12 1 883 1049 711814849 711815014 1.510000e-57 235.0
50 TraesCS7D01G333600 chr7A 87.903 124 11 4 8854 8975 478160257 478160136 9.390000e-30 143.0
51 TraesCS7D01G333600 chr7A 85.593 118 13 4 5306 5421 507876504 507876389 4.400000e-23 121.0
52 TraesCS7D01G333600 chr7A 84.483 116 11 3 5719 5827 507876145 507876030 3.430000e-19 108.0
53 TraesCS7D01G333600 chr7A 96.552 58 2 0 3199 3256 711816940 711816997 7.420000e-16 97.1
54 TraesCS7D01G333600 chr6D 83.186 565 66 18 1810 2362 438539012 438539559 2.910000e-134 490.0
55 TraesCS7D01G333600 chr6D 85.537 242 8 2 1036 1277 226922932 226922718 2.520000e-55 228.0
56 TraesCS7D01G333600 chr6D 94.737 95 3 2 6928 7021 427674622 427674529 7.260000e-31 147.0
57 TraesCS7D01G333600 chr6D 85.106 141 12 5 8840 8973 27788544 27788682 1.570000e-27 135.0
58 TraesCS7D01G333600 chr6D 89.130 92 10 0 6309 6400 452339973 452339882 2.050000e-21 115.0
59 TraesCS7D01G333600 chr6D 100.000 27 0 0 1008 1034 226923268 226923242 5.900000e-02 51.0
60 TraesCS7D01G333600 chr5B 92.093 215 15 2 1092 1304 195148626 195148412 1.460000e-77 302.0
61 TraesCS7D01G333600 chr5B 95.789 95 2 2 6930 7023 33191305 33191398 1.560000e-32 152.0
62 TraesCS7D01G333600 chr5B 87.069 116 11 4 8861 8975 678492391 678492279 2.630000e-25 128.0
63 TraesCS7D01G333600 chr6B 86.131 274 11 3 1019 1292 421002459 421002213 4.130000e-68 270.0
64 TraesCS7D01G333600 chr6B 95.082 122 6 0 1010 1131 288804684 288804563 9.200000e-45 193.0
65 TraesCS7D01G333600 chr2A 95.205 146 7 0 1008 1153 129754305 129754160 1.950000e-56 231.0
66 TraesCS7D01G333600 chr2A 94.000 100 4 2 6925 7024 81757218 81757315 5.610000e-32 150.0
67 TraesCS7D01G333600 chr2A 86.408 103 11 2 6299 6400 625275050 625274950 9.530000e-20 110.0
68 TraesCS7D01G333600 chr3D 83.471 242 31 6 1936 2177 340697324 340697092 5.460000e-52 217.0
69 TraesCS7D01G333600 chr3D 100.000 88 0 0 6935 7022 217311654 217311567 7.210000e-36 163.0
70 TraesCS7D01G333600 chr1B 95.575 113 5 0 1180 1292 429715156 429715268 1.990000e-41 182.0
71 TraesCS7D01G333600 chr1B 94.737 95 4 1 6926 7020 571173335 571173428 7.260000e-31 147.0
72 TraesCS7D01G333600 chr1B 90.741 108 8 2 6933 7039 426463816 426463922 9.390000e-30 143.0
73 TraesCS7D01G333600 chr3A 88.372 129 13 2 8848 8975 83775592 83775719 4.340000e-33 154.0
74 TraesCS7D01G333600 chr3A 88.889 90 10 0 6311 6400 25200040 25200129 2.650000e-20 111.0
75 TraesCS7D01G333600 chr5D 87.050 139 9 5 8844 8975 322989773 322989637 2.020000e-31 148.0
76 TraesCS7D01G333600 chr5D 87.069 116 11 4 8861 8975 537752501 537752389 2.630000e-25 128.0
77 TraesCS7D01G333600 chr4D 94.737 95 3 2 6930 7023 281740394 281740301 7.260000e-31 147.0
78 TraesCS7D01G333600 chr4A 85.034 147 19 3 3575 3718 473518438 473518292 7.260000e-31 147.0
79 TraesCS7D01G333600 chr4A 88.043 92 11 0 6309 6400 345997494 345997585 9.530000e-20 110.0
80 TraesCS7D01G333600 chr3B 94.737 95 4 1 6927 7021 678709779 678709872 7.260000e-31 147.0
81 TraesCS7D01G333600 chr3B 88.596 114 10 3 6930 7042 59958681 59958570 1.570000e-27 135.0
82 TraesCS7D01G333600 chr2D 85.034 147 11 8 8837 8975 609761074 609760931 1.220000e-28 139.0
83 TraesCS7D01G333600 chr2D 85.315 143 10 8 8840 8975 307808452 307808314 4.370000e-28 137.0
84 TraesCS7D01G333600 chr2D 88.298 94 7 4 6321 6412 247833977 247834068 9.530000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G333600 chr7D 425036336 425045310 8974 False 16574.000000 16574 100.000000 1 8975 1 chr7D.!!$F1 8974
1 TraesCS7D01G333600 chr7D 618085310 618094887 9577 False 826.840000 1991 91.541700 1100 8441 10 chr7D.!!$F3 7341
2 TraesCS7D01G333600 chr7B 712468361 712472842 4481 False 1519.250000 3336 91.827500 963 5598 4 chr7B.!!$F2 4635
3 TraesCS7D01G333600 chr7B 443073876 443083421 9545 False 945.785714 3879 94.066429 1 8975 14 chr7B.!!$F1 8974
4 TraesCS7D01G333600 chr7B 712477387 712482286 4899 False 900.000000 1275 88.765667 5843 8441 3 chr7B.!!$F3 2598
5 TraesCS7D01G333600 chr7A 711814849 711819402 4553 False 1229.420000 3326 91.899000 883 5598 5 chr7A.!!$F2 4715
6 TraesCS7D01G333600 chr7A 507873552 507881516 7964 True 1074.500000 2100 85.900000 283 8427 6 chr7A.!!$R2 8144
7 TraesCS7D01G333600 chr7A 711825594 711828621 3027 False 783.500000 1223 88.350250 5577 8323 4 chr7A.!!$F3 2746
8 TraesCS7D01G333600 chr6D 438539012 438539559 547 False 490.000000 490 83.186000 1810 2362 1 chr6D.!!$F2 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
507 512 0.107993 CGCAAGCTCAGAAGATCCCA 60.108 55.000 0.00 0.0 0.00 4.37 F
868 910 0.327964 CCCTTCCATTCCTCCCTCCT 60.328 60.000 0.00 0.0 0.00 3.69 F
2082 2217 1.065410 ATTGACTGACCCCCACACCA 61.065 55.000 0.00 0.0 0.00 4.17 F
2866 3353 0.548031 ATGCACATCCCTTCGGTCAT 59.452 50.000 0.00 0.0 0.00 3.06 F
3482 4007 1.063174 GATCCAAACTCAGTGATGCGC 59.937 52.381 0.00 0.0 0.00 6.09 F
3822 4359 2.225467 GCTCTCCTTTTTGTGCAGACT 58.775 47.619 0.00 0.0 0.00 3.24 F
5606 7907 0.725784 CAAGTCGCGAACAACATGCC 60.726 55.000 12.06 0.0 0.00 4.40 F
5765 8067 0.178873 TCTCTAGGTGGGGGCAAGTT 60.179 55.000 0.00 0.0 0.00 2.66 F
6063 9781 0.249398 AAGGCGCATCCGTAGAAACT 59.751 50.000 10.83 0.0 40.77 2.66 F
6642 10443 1.392589 ATGTGGAAATGATCACCGGC 58.607 50.000 0.00 0.0 33.29 6.13 F
6949 10844 1.431633 TCTTGTACTCCCTCTGTCCCA 59.568 52.381 0.00 0.0 0.00 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2087 2222 0.394352 GACCTGCAAATCGATGGGGT 60.394 55.000 0.00 3.23 0.00 4.95 R
2395 2770 1.613437 ACAAACCCATACTTGCTGTGC 59.387 47.619 0.00 0.00 0.00 4.57 R
3279 3800 1.670811 GCACAGCTATTTACGCCACAT 59.329 47.619 0.00 0.00 0.00 3.21 R
3684 4209 2.890945 AGGAAGAAATTTGGGGTTCACG 59.109 45.455 0.00 0.00 0.00 4.35 R
4501 6625 3.641437 TTCGAATTGTCCTTTGGCTTG 57.359 42.857 0.00 0.00 0.00 4.01 R
5696 7997 1.338105 CCCTCTTCGTGATGTTCTGCA 60.338 52.381 0.00 0.00 0.00 4.41 R
7004 10899 0.257039 GTAGTACTCCCTCCGTCCCA 59.743 60.000 0.00 0.00 0.00 4.37 R
7005 10900 0.467106 GGTAGTACTCCCTCCGTCCC 60.467 65.000 0.00 0.00 0.00 4.46 R
7006 10901 0.550432 AGGTAGTACTCCCTCCGTCC 59.450 60.000 0.11 0.00 0.00 4.79 R
7967 14935 0.593618 GACGAGACAGACTCAGTGCA 59.406 55.000 0.74 0.00 45.14 4.57 R
8839 15817 0.179234 AAAAGCCCAAACAAACGGGG 59.821 50.000 0.00 0.00 43.31 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
134 135 2.284150 GCGCGCTTAACATCAGACAATA 59.716 45.455 26.67 0.00 0.00 1.90
135 136 3.242284 GCGCGCTTAACATCAGACAATAA 60.242 43.478 26.67 0.00 0.00 1.40
136 137 4.508971 CGCGCTTAACATCAGACAATAAG 58.491 43.478 5.56 0.00 0.00 1.73
137 138 4.550831 CGCGCTTAACATCAGACAATAAGG 60.551 45.833 5.56 0.00 0.00 2.69
140 141 6.403200 GCGCTTAACATCAGACAATAAGGAAA 60.403 38.462 0.00 0.00 0.00 3.13
164 165 5.024785 AGAAAATCATACTTCCTCCGTCC 57.975 43.478 0.00 0.00 0.00 4.79
166 167 1.329256 ATCATACTTCCTCCGTCCCG 58.671 55.000 0.00 0.00 0.00 5.14
251 252 7.255801 GGGACAATTATCTTAGGACAGAGAGAG 60.256 44.444 0.00 0.00 0.00 3.20
256 257 9.930158 AATTATCTTAGGACAGAGAGAGTACTT 57.070 33.333 0.00 0.00 31.28 2.24
262 263 5.848406 AGGACAGAGAGAGTACTTGTTTTG 58.152 41.667 0.00 0.00 0.00 2.44
270 271 8.371699 AGAGAGAGTACTTGTTTTGCTCTTATT 58.628 33.333 8.83 0.00 36.75 1.40
304 305 1.652947 ACGACCACCTAACCCTCAAT 58.347 50.000 0.00 0.00 0.00 2.57
348 349 1.618837 TCACCAACCTCTGCACTCTAC 59.381 52.381 0.00 0.00 0.00 2.59
384 385 3.939066 ACCTATCGTTCAAAACTCCCAG 58.061 45.455 0.00 0.00 0.00 4.45
423 424 3.758554 GCATAATAATCGGTGAAGCCCAT 59.241 43.478 0.00 0.00 0.00 4.00
424 425 4.941263 GCATAATAATCGGTGAAGCCCATA 59.059 41.667 0.00 0.00 0.00 2.74
426 427 4.706842 AATAATCGGTGAAGCCCATAGT 57.293 40.909 0.00 0.00 0.00 2.12
437 438 0.811616 GCCCATAGTGAGAGTTGCCG 60.812 60.000 0.00 0.00 0.00 5.69
439 440 0.537188 CCATAGTGAGAGTTGCCGGT 59.463 55.000 1.90 0.00 0.00 5.28
450 451 1.899814 AGTTGCCGGTCATCTCACTTA 59.100 47.619 1.90 0.00 0.00 2.24
451 452 2.501723 AGTTGCCGGTCATCTCACTTAT 59.498 45.455 1.90 0.00 0.00 1.73
452 453 2.602257 TGCCGGTCATCTCACTTATG 57.398 50.000 1.90 0.00 0.00 1.90
453 454 1.831106 TGCCGGTCATCTCACTTATGT 59.169 47.619 1.90 0.00 0.00 2.29
458 459 4.935205 CCGGTCATCTCACTTATGTTTTCA 59.065 41.667 0.00 0.00 0.00 2.69
507 512 0.107993 CGCAAGCTCAGAAGATCCCA 60.108 55.000 0.00 0.00 0.00 4.37
510 515 0.539051 AAGCTCAGAAGATCCCACCG 59.461 55.000 0.00 0.00 0.00 4.94
511 516 0.616111 AGCTCAGAAGATCCCACCGT 60.616 55.000 0.00 0.00 0.00 4.83
564 576 7.493971 CACCCATACAACTCAATCTCTCTTTAG 59.506 40.741 0.00 0.00 0.00 1.85
632 654 3.466836 TCGGCGCAAAGAATAGATGAAT 58.533 40.909 10.83 0.00 0.00 2.57
659 681 3.861276 ACGGATAAACACGATGACAGA 57.139 42.857 0.00 0.00 0.00 3.41
868 910 0.327964 CCCTTCCATTCCTCCCTCCT 60.328 60.000 0.00 0.00 0.00 3.69
907 950 4.926162 AAACCCAACCCCACGCCC 62.926 66.667 0.00 0.00 0.00 6.13
1525 1594 6.758416 CAGTCGATCAGATTTGAGGTTTATGA 59.242 38.462 0.00 0.00 36.61 2.15
1549 1618 4.164988 TGATGTTGATGGGTTTGGGTTTTT 59.835 37.500 0.00 0.00 0.00 1.94
1704 1777 9.642327 CTCATAGATCGATTGATTTCTTCTCAT 57.358 33.333 0.00 0.00 34.09 2.90
1821 1938 8.407832 TCAATGCTAATTCTACATTTCACCATG 58.592 33.333 0.00 0.00 31.82 3.66
1867 1987 8.543774 CACTTCTTTCTCGGTTATATTGATCAC 58.456 37.037 0.00 0.00 0.00 3.06
2060 2195 8.534333 AGTTTCTTCTTTTCAGTTTTTGTTCC 57.466 30.769 0.00 0.00 0.00 3.62
2076 2211 2.307686 TGTTCCTAATTGACTGACCCCC 59.692 50.000 0.00 0.00 0.00 5.40
2077 2212 2.307686 GTTCCTAATTGACTGACCCCCA 59.692 50.000 0.00 0.00 0.00 4.96
2078 2213 1.913419 TCCTAATTGACTGACCCCCAC 59.087 52.381 0.00 0.00 0.00 4.61
2082 2217 1.065410 ATTGACTGACCCCCACACCA 61.065 55.000 0.00 0.00 0.00 4.17
2083 2218 1.990160 TTGACTGACCCCCACACCAC 61.990 60.000 0.00 0.00 0.00 4.16
2084 2219 3.175710 ACTGACCCCCACACCACC 61.176 66.667 0.00 0.00 0.00 4.61
2085 2220 3.966543 CTGACCCCCACACCACCC 61.967 72.222 0.00 0.00 0.00 4.61
2174 2531 9.073475 AGTATGCTCTTAGACTCCTTACTATTG 57.927 37.037 0.00 0.00 0.00 1.90
2288 2656 8.405531 GGCTTAAAATATTGCATGACAGAACTA 58.594 33.333 0.00 0.00 0.00 2.24
2301 2670 9.031360 GCATGACAGAACTATTTAAGTCGAATA 57.969 33.333 0.00 0.00 37.50 1.75
2395 2770 6.410337 CACATTTTTGTTTGTATTTTGTGGCG 59.590 34.615 0.00 0.00 0.00 5.69
2419 2796 4.072131 ACAGCAAGTATGGGTTTGTACTG 58.928 43.478 0.00 0.00 31.83 2.74
2661 3131 8.893727 AGTTATCAGTTACAAACCAGCATATTC 58.106 33.333 0.00 0.00 0.00 1.75
2811 3292 3.688159 GTGCCAGCAGCCTTTGGG 61.688 66.667 1.53 0.00 42.71 4.12
2866 3353 0.548031 ATGCACATCCCTTCGGTCAT 59.452 50.000 0.00 0.00 0.00 3.06
2970 3467 6.774170 TCTTTAGCTCCCGTATAGACATAACA 59.226 38.462 0.00 0.00 0.00 2.41
2989 3487 5.869753 AACATGCTCAAGTGTTACTGATC 57.130 39.130 0.00 0.00 36.83 2.92
3113 3613 7.563724 TCCCTATAAACAGGTGTTATATCCC 57.436 40.000 0.00 0.00 37.25 3.85
3115 3615 8.466797 TCCCTATAAACAGGTGTTATATCCCTA 58.533 37.037 0.00 0.00 37.25 3.53
3116 3616 9.280456 CCCTATAAACAGGTGTTATATCCCTAT 57.720 37.037 0.00 0.00 37.25 2.57
3123 3623 9.862149 AACAGGTGTTATATCCCTATAAAAAGG 57.138 33.333 0.00 0.00 36.32 3.11
3124 3624 9.010767 ACAGGTGTTATATCCCTATAAAAAGGT 57.989 33.333 0.00 0.00 32.85 3.50
3125 3625 9.284968 CAGGTGTTATATCCCTATAAAAAGGTG 57.715 37.037 0.00 0.00 32.85 4.00
3126 3626 9.010767 AGGTGTTATATCCCTATAAAAAGGTGT 57.989 33.333 0.00 0.00 32.85 4.16
3127 3627 9.636789 GGTGTTATATCCCTATAAAAAGGTGTT 57.363 33.333 0.00 0.00 32.85 3.32
3208 3708 4.961730 CCCCCATCCTGAAAATTGTCATAA 59.038 41.667 0.00 0.00 0.00 1.90
3279 3800 4.440525 CCCTATACACCGAGTTTAAAGCGA 60.441 45.833 10.91 0.00 0.00 4.93
3285 3806 1.202031 CCGAGTTTAAAGCGATGTGGC 60.202 52.381 10.91 0.00 0.00 5.01
3405 3929 7.434897 TGCTTGTTTATGTCATTGTTGAAACTC 59.565 33.333 8.77 1.85 32.48 3.01
3482 4007 1.063174 GATCCAAACTCAGTGATGCGC 59.937 52.381 0.00 0.00 0.00 6.09
3522 4047 3.502920 GCCGATGATGGTAGTATCTTCG 58.497 50.000 13.67 13.67 46.08 3.79
3715 4240 5.122396 CCCAAATTTCTTCCTCGAGTAAGTG 59.878 44.000 16.30 7.75 0.00 3.16
3729 4254 7.376336 CCTCGAGTAAGTGAACATATTTAGTCG 59.624 40.741 12.31 17.31 44.32 4.18
3760 4297 7.630242 TTTCTGCAAATTTGGATCCTACTAG 57.370 36.000 19.47 2.96 0.00 2.57
3780 4317 4.213564 AGTAGGTGATTTCCAAGCTCTG 57.786 45.455 0.00 0.00 0.00 3.35
3822 4359 2.225467 GCTCTCCTTTTTGTGCAGACT 58.775 47.619 0.00 0.00 0.00 3.24
3915 4452 6.884187 TGTCTTTCATTTCTGTTACGCTTAC 58.116 36.000 0.00 0.00 0.00 2.34
3922 4459 5.900339 TTTCTGTTACGCTTACAACTGAG 57.100 39.130 0.00 0.00 35.11 3.35
3989 4528 4.282873 CGAGTTGCACTCTTTCCTTTTTC 58.717 43.478 12.45 0.00 42.92 2.29
4026 4565 5.221843 TGAGGACTAGCTTGTTATGTTGGTT 60.222 40.000 1.43 0.00 0.00 3.67
4028 4567 5.473504 AGGACTAGCTTGTTATGTTGGTTTG 59.526 40.000 1.43 0.00 0.00 2.93
4041 4580 9.088512 GTTATGTTGGTTTGTTGTGATTGTAAA 57.911 29.630 0.00 0.00 0.00 2.01
4116 4656 4.700213 CCCTTTCCTTGAACGAATGTACAT 59.300 41.667 1.41 1.41 0.00 2.29
4228 4774 4.640789 ATACGAGTTGAAGACTAGGCAG 57.359 45.455 0.00 0.00 39.19 4.85
4246 4803 5.669477 AGGCAGAGTCTAAATCAGATTGTC 58.331 41.667 0.00 0.00 35.17 3.18
4327 4885 5.485353 AGATCTTAATCGGAATGGATGGCTA 59.515 40.000 0.00 0.00 36.97 3.93
4518 6642 3.391506 AAGCAAGCCAAAGGACAATTC 57.608 42.857 0.00 0.00 0.00 2.17
4534 6658 6.373216 AGGACAATTCGAAACGATAAATCCAA 59.627 34.615 0.00 0.00 35.23 3.53
4561 6689 4.952957 TCCTTGTGTTCTTTGGTGATTTCA 59.047 37.500 0.00 0.00 0.00 2.69
4909 7049 8.738645 ATCAAGAATATACTGTTTGACCTTCC 57.261 34.615 0.00 0.00 31.34 3.46
4928 7068 5.337813 CCTTCCAAATGCTGCTAATTTCCTT 60.338 40.000 0.00 0.00 0.00 3.36
5185 7355 5.061311 CGTTTGATCATTCCTTTGCAATGTC 59.939 40.000 0.00 0.00 33.61 3.06
5206 7383 9.985730 AATGTCAATAATCAGAAACACAATGTT 57.014 25.926 0.00 0.00 43.41 2.71
5267 7444 7.121382 ACATCTGACCATTCCTGTGATAATTT 58.879 34.615 0.00 0.00 0.00 1.82
5276 7453 6.480524 TTCCTGTGATAATTTCTTCACACG 57.519 37.500 12.07 9.73 45.35 4.49
5284 7461 9.088512 GTGATAATTTCTTCACACGTATCTTCT 57.911 33.333 9.66 0.00 41.48 2.85
5380 7557 1.571919 GCCTCTGGTGCATACTAACG 58.428 55.000 0.00 0.00 0.00 3.18
5489 7790 5.070180 TGAATTCTGAAACCATCCTGCAAAA 59.930 36.000 7.05 0.00 0.00 2.44
5606 7907 0.725784 CAAGTCGCGAACAACATGCC 60.726 55.000 12.06 0.00 0.00 4.40
5632 7933 5.005740 ACTAGTTTCGTTTTAATCCCCACC 58.994 41.667 0.00 0.00 0.00 4.61
5633 7934 2.815503 AGTTTCGTTTTAATCCCCACCG 59.184 45.455 0.00 0.00 0.00 4.94
5634 7935 1.166989 TTCGTTTTAATCCCCACCGC 58.833 50.000 0.00 0.00 0.00 5.68
5665 7966 4.264253 TGTGTTATTCCCTTCATCTGCAG 58.736 43.478 7.63 7.63 0.00 4.41
5671 7972 4.342862 TTCCCTTCATCTGCAGTATAGC 57.657 45.455 14.67 0.00 0.00 2.97
5674 7975 3.072184 CCCTTCATCTGCAGTATAGCCTT 59.928 47.826 14.67 0.00 0.00 4.35
5689 7990 7.968405 CAGTATAGCCTTCATGTTTAACCAAAC 59.032 37.037 0.00 0.00 43.67 2.93
5708 8009 1.605710 ACAGCAACTGCAGAACATCAC 59.394 47.619 23.35 2.16 45.16 3.06
5713 8014 2.802247 CAACTGCAGAACATCACGAAGA 59.198 45.455 23.35 0.00 0.00 2.87
5765 8067 0.178873 TCTCTAGGTGGGGGCAAGTT 60.179 55.000 0.00 0.00 0.00 2.66
5822 8131 3.126001 TCATGAACCAAGGACTGTCAC 57.874 47.619 10.38 0.00 0.00 3.67
5827 8136 2.696526 ACCAAGGACTGTCACTAGGA 57.303 50.000 10.38 0.00 0.00 2.94
5939 9649 2.827921 GGATTCAGACCCAAACTGCAAT 59.172 45.455 0.00 0.00 35.61 3.56
6063 9781 0.249398 AAGGCGCATCCGTAGAAACT 59.751 50.000 10.83 0.00 40.77 2.66
6107 9825 3.788227 AACATTACCTCAGTTCTGCCA 57.212 42.857 0.00 0.00 0.00 4.92
6287 10038 4.638421 TCCGTTGGTTTAATTATCCAGCTG 59.362 41.667 6.78 6.78 31.84 4.24
6289 10040 4.096382 CGTTGGTTTAATTATCCAGCTGCT 59.904 41.667 8.66 0.00 31.84 4.24
6317 10068 4.271661 TGCCATAAGCTGATTGACAATGA 58.728 39.130 5.14 0.00 44.23 2.57
6328 10079 6.183360 GCTGATTGACAATGATCAGGAAATCA 60.183 38.462 15.64 19.43 45.91 2.57
6426 10177 3.245586 TGACCACCAAGCAGGGATTATTT 60.246 43.478 0.10 0.00 43.89 1.40
6432 10183 1.780503 AGCAGGGATTATTTGGCCAC 58.219 50.000 3.88 0.00 0.00 5.01
6454 10205 7.465513 GCCACTTAACTGTTCTATCGGTTTATG 60.466 40.741 0.00 0.00 37.90 1.90
6466 10217 8.725405 TCTATCGGTTTATGTTTTGAGCATTA 57.275 30.769 0.00 0.00 0.00 1.90
6507 10258 7.936496 TTCTTTGCACCAATCTGTCATAATA 57.064 32.000 0.00 0.00 0.00 0.98
6642 10443 1.392589 ATGTGGAAATGATCACCGGC 58.607 50.000 0.00 0.00 33.29 6.13
6682 10483 5.334260 CCTTTTGTTTTGCGAGTTCGGTATA 60.334 40.000 3.50 0.00 40.23 1.47
6756 10566 8.778358 CCCTGATTTCTCCTATTAAATCTTTCG 58.222 37.037 8.69 0.00 40.92 3.46
6876 10771 5.090845 ACTGGTTTAATTGCCCAATTACCT 58.909 37.500 19.00 5.18 41.43 3.08
6897 10792 6.471146 ACCTATCTTGCTATAAGCTGATTGG 58.529 40.000 21.08 21.08 44.09 3.16
6933 10828 3.376859 TGCGCCAAGTTACCATAATCTTG 59.623 43.478 4.18 0.00 37.57 3.02
6934 10829 3.377172 GCGCCAAGTTACCATAATCTTGT 59.623 43.478 0.00 0.00 36.53 3.16
6935 10830 4.573201 GCGCCAAGTTACCATAATCTTGTA 59.427 41.667 0.00 0.00 36.53 2.41
6936 10831 5.503520 GCGCCAAGTTACCATAATCTTGTAC 60.504 44.000 0.00 0.00 36.53 2.90
6937 10832 5.815740 CGCCAAGTTACCATAATCTTGTACT 59.184 40.000 0.00 0.00 36.53 2.73
6938 10833 6.018994 CGCCAAGTTACCATAATCTTGTACTC 60.019 42.308 0.00 0.00 36.53 2.59
6939 10834 6.260271 GCCAAGTTACCATAATCTTGTACTCC 59.740 42.308 0.00 0.00 36.53 3.85
6940 10835 6.766467 CCAAGTTACCATAATCTTGTACTCCC 59.234 42.308 0.00 0.00 36.53 4.30
6941 10836 7.365652 CCAAGTTACCATAATCTTGTACTCCCT 60.366 40.741 0.00 0.00 36.53 4.20
6942 10837 7.362802 AGTTACCATAATCTTGTACTCCCTC 57.637 40.000 0.00 0.00 0.00 4.30
6943 10838 7.133483 AGTTACCATAATCTTGTACTCCCTCT 58.867 38.462 0.00 0.00 0.00 3.69
6944 10839 5.878406 ACCATAATCTTGTACTCCCTCTG 57.122 43.478 0.00 0.00 0.00 3.35
6945 10840 5.281314 ACCATAATCTTGTACTCCCTCTGT 58.719 41.667 0.00 0.00 0.00 3.41
6946 10841 5.364157 ACCATAATCTTGTACTCCCTCTGTC 59.636 44.000 0.00 0.00 0.00 3.51
6947 10842 5.221541 CCATAATCTTGTACTCCCTCTGTCC 60.222 48.000 0.00 0.00 0.00 4.02
6948 10843 2.233305 TCTTGTACTCCCTCTGTCCC 57.767 55.000 0.00 0.00 0.00 4.46
6949 10844 1.431633 TCTTGTACTCCCTCTGTCCCA 59.568 52.381 0.00 0.00 0.00 4.37
6950 10845 2.044492 TCTTGTACTCCCTCTGTCCCAT 59.956 50.000 0.00 0.00 0.00 4.00
6951 10846 3.271225 TCTTGTACTCCCTCTGTCCCATA 59.729 47.826 0.00 0.00 0.00 2.74
6952 10847 3.769189 TGTACTCCCTCTGTCCCATAA 57.231 47.619 0.00 0.00 0.00 1.90
6953 10848 4.280789 TGTACTCCCTCTGTCCCATAAT 57.719 45.455 0.00 0.00 0.00 1.28
6954 10849 5.412617 TGTACTCCCTCTGTCCCATAATA 57.587 43.478 0.00 0.00 0.00 0.98
6955 10850 5.977533 TGTACTCCCTCTGTCCCATAATAT 58.022 41.667 0.00 0.00 0.00 1.28
6956 10851 7.111136 TGTACTCCCTCTGTCCCATAATATA 57.889 40.000 0.00 0.00 0.00 0.86
6957 10852 7.541074 TGTACTCCCTCTGTCCCATAATATAA 58.459 38.462 0.00 0.00 0.00 0.98
6958 10853 7.674348 TGTACTCCCTCTGTCCCATAATATAAG 59.326 40.741 0.00 0.00 0.00 1.73
6959 10854 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
6960 10855 7.313731 ACTCCCTCTGTCCCATAATATAAGAA 58.686 38.462 0.00 0.00 0.00 2.52
6961 10856 7.235812 ACTCCCTCTGTCCCATAATATAAGAAC 59.764 40.741 0.00 0.00 0.00 3.01
6962 10857 7.079700 TCCCTCTGTCCCATAATATAAGAACA 58.920 38.462 0.00 0.00 0.00 3.18
6963 10858 7.739444 TCCCTCTGTCCCATAATATAAGAACAT 59.261 37.037 0.00 0.00 0.00 2.71
6964 10859 8.386264 CCCTCTGTCCCATAATATAAGAACATT 58.614 37.037 0.00 0.00 0.00 2.71
6965 10860 9.799106 CCTCTGTCCCATAATATAAGAACATTT 57.201 33.333 0.00 0.00 0.00 2.32
6995 10890 7.920908 ACTACTAGTAGTGTCAAAAACGTTC 57.079 36.000 30.33 0.00 44.11 3.95
6996 10891 7.710896 ACTACTAGTAGTGTCAAAAACGTTCT 58.289 34.615 30.33 4.02 44.11 3.01
6997 10892 8.193438 ACTACTAGTAGTGTCAAAAACGTTCTT 58.807 33.333 30.33 3.66 44.11 2.52
6998 10893 9.669353 CTACTAGTAGTGTCAAAAACGTTCTTA 57.331 33.333 20.01 0.00 0.00 2.10
7007 10902 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
7008 10903 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
7009 10904 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
7010 10905 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
7011 10906 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
7012 10907 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
7013 10908 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
7014 10909 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
7015 10910 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
7016 10911 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
7038 10933 7.852550 GGAGTACTACCTAAGTCCCAAATAT 57.147 40.000 0.00 0.00 39.80 1.28
7278 13595 3.578716 AGTGCTGCTTCCACTCTTAACTA 59.421 43.478 0.00 0.00 39.19 2.24
7454 13859 6.647212 TGATTCATAGTTTGTTGCTACTCG 57.353 37.500 0.00 0.00 0.00 4.18
7488 13893 5.957771 AACATGAGCCATCTTCTACCTAA 57.042 39.130 0.00 0.00 0.00 2.69
7514 13919 7.539712 TGCACTCTACATTTCTTATAAGCAC 57.460 36.000 7.67 0.00 0.00 4.40
7665 14610 7.862372 GTCACAACTGATTGATTGAAAGCTTTA 59.138 33.333 12.68 0.00 39.30 1.85
7741 14707 6.489022 GTCTAGCCCTTTTGACCTTTTTCTTA 59.511 38.462 0.00 0.00 0.00 2.10
7807 14773 1.679977 TGGCATGCTTCTTGGCTCC 60.680 57.895 18.92 0.00 40.12 4.70
7840 14806 2.180017 GCACTTGCTTCCCATGCG 59.820 61.111 0.00 0.00 38.21 4.73
8192 15162 6.037720 GCTGGGAGCTCTATTTTTACTTCTTC 59.962 42.308 14.64 0.00 38.45 2.87
8193 15163 7.259088 TGGGAGCTCTATTTTTACTTCTTCT 57.741 36.000 14.64 0.00 0.00 2.85
8194 15164 7.690256 TGGGAGCTCTATTTTTACTTCTTCTT 58.310 34.615 14.64 0.00 0.00 2.52
8304 15278 4.015872 TGGCTTGTCCTATTTCGACTTT 57.984 40.909 0.00 0.00 35.26 2.66
8430 15404 2.665185 GTGAGAAGCACGGCGGTT 60.665 61.111 13.24 0.66 37.83 4.44
8431 15405 2.110213 TGAGAAGCACGGCGGTTT 59.890 55.556 13.24 4.37 34.82 3.27
8432 15406 1.959226 TGAGAAGCACGGCGGTTTC 60.959 57.895 13.24 13.65 34.82 2.78
8433 15407 1.668151 GAGAAGCACGGCGGTTTCT 60.668 57.895 20.68 20.68 40.43 2.52
8434 15408 1.627550 GAGAAGCACGGCGGTTTCTC 61.628 60.000 25.78 25.78 44.20 2.87
8435 15409 1.959226 GAAGCACGGCGGTTTCTCA 60.959 57.895 13.24 0.00 34.82 3.27
8436 15410 2.171489 GAAGCACGGCGGTTTCTCAC 62.171 60.000 13.24 0.00 34.82 3.51
8437 15411 2.933878 AAGCACGGCGGTTTCTCACA 62.934 55.000 13.24 0.00 28.49 3.58
8438 15412 2.539338 GCACGGCGGTTTCTCACAA 61.539 57.895 13.24 0.00 0.00 3.33
8439 15413 2.018544 CACGGCGGTTTCTCACAAA 58.981 52.632 13.24 0.00 0.00 2.83
8440 15414 0.591170 CACGGCGGTTTCTCACAAAT 59.409 50.000 13.24 0.00 0.00 2.32
8441 15415 1.001815 CACGGCGGTTTCTCACAAATT 60.002 47.619 13.24 0.00 0.00 1.82
8451 15425 6.419710 CGGTTTCTCACAAATTTAGAAAACCC 59.580 38.462 18.05 13.59 41.70 4.11
8461 15435 7.598493 ACAAATTTAGAAAACCCGATTCACATG 59.402 33.333 0.00 0.00 0.00 3.21
8464 15438 7.931578 TTTAGAAAACCCGATTCACATGTAT 57.068 32.000 0.00 0.00 0.00 2.29
8486 15462 3.689161 TGCGCATCTTGCATAAAGTACTT 59.311 39.130 5.66 1.12 45.36 2.24
8487 15463 4.201812 TGCGCATCTTGCATAAAGTACTTC 60.202 41.667 5.66 0.00 45.36 3.01
8488 15464 4.508971 CGCATCTTGCATAAAGTACTTCG 58.491 43.478 8.95 2.01 45.36 3.79
8494 15470 3.000041 TGCATAAAGTACTTCGGCACAG 59.000 45.455 19.01 4.88 0.00 3.66
8510 15486 4.264614 CGGCACAGACTTTTATGTACGTAG 59.735 45.833 0.00 0.00 0.00 3.51
8511 15487 5.404946 GGCACAGACTTTTATGTACGTAGA 58.595 41.667 0.00 0.00 0.00 2.59
8512 15488 5.865552 GGCACAGACTTTTATGTACGTAGAA 59.134 40.000 0.00 0.00 0.00 2.10
8513 15489 6.034683 GGCACAGACTTTTATGTACGTAGAAG 59.965 42.308 18.98 18.98 0.00 2.85
8514 15490 6.805271 GCACAGACTTTTATGTACGTAGAAGA 59.195 38.462 24.70 0.00 0.00 2.87
8515 15491 7.327761 GCACAGACTTTTATGTACGTAGAAGAA 59.672 37.037 24.70 3.23 0.00 2.52
8516 15492 9.188588 CACAGACTTTTATGTACGTAGAAGAAA 57.811 33.333 24.70 9.86 0.00 2.52
8517 15493 9.924650 ACAGACTTTTATGTACGTAGAAGAAAT 57.075 29.630 24.70 8.81 0.00 2.17
8525 15501 9.793252 TTATGTACGTAGAAGAAATAGGACAAC 57.207 33.333 0.00 0.00 0.00 3.32
8526 15502 7.218228 TGTACGTAGAAGAAATAGGACAACA 57.782 36.000 0.00 0.00 0.00 3.33
8527 15503 7.660112 TGTACGTAGAAGAAATAGGACAACAA 58.340 34.615 0.00 0.00 0.00 2.83
8528 15504 7.596248 TGTACGTAGAAGAAATAGGACAACAAC 59.404 37.037 0.00 0.00 0.00 3.32
8529 15505 6.756221 ACGTAGAAGAAATAGGACAACAACT 58.244 36.000 0.00 0.00 0.00 3.16
8530 15506 7.889469 ACGTAGAAGAAATAGGACAACAACTA 58.111 34.615 0.00 0.00 0.00 2.24
8531 15507 8.027771 ACGTAGAAGAAATAGGACAACAACTAG 58.972 37.037 0.00 0.00 0.00 2.57
8532 15508 7.009357 CGTAGAAGAAATAGGACAACAACTAGC 59.991 40.741 0.00 0.00 0.00 3.42
8533 15509 7.010339 AGAAGAAATAGGACAACAACTAGCT 57.990 36.000 0.00 0.00 0.00 3.32
8534 15510 7.100409 AGAAGAAATAGGACAACAACTAGCTC 58.900 38.462 0.00 0.00 0.00 4.09
8535 15511 6.360370 AGAAATAGGACAACAACTAGCTCA 57.640 37.500 0.00 0.00 0.00 4.26
8536 15512 6.402222 AGAAATAGGACAACAACTAGCTCAG 58.598 40.000 0.00 0.00 0.00 3.35
8537 15513 5.746990 AATAGGACAACAACTAGCTCAGT 57.253 39.130 0.00 0.00 40.05 3.41
8538 15514 6.852420 AATAGGACAACAACTAGCTCAGTA 57.148 37.500 0.00 0.00 36.04 2.74
8539 15515 7.425224 AATAGGACAACAACTAGCTCAGTAT 57.575 36.000 0.00 0.00 36.04 2.12
8540 15516 5.746990 AGGACAACAACTAGCTCAGTATT 57.253 39.130 0.00 0.00 36.04 1.89
8541 15517 6.115448 AGGACAACAACTAGCTCAGTATTT 57.885 37.500 0.00 0.00 36.04 1.40
8542 15518 5.934625 AGGACAACAACTAGCTCAGTATTTG 59.065 40.000 0.00 2.95 36.04 2.32
8543 15519 5.932303 GGACAACAACTAGCTCAGTATTTGA 59.068 40.000 15.76 0.00 36.04 2.69
8544 15520 6.595716 GGACAACAACTAGCTCAGTATTTGAT 59.404 38.462 15.76 7.20 36.04 2.57
8545 15521 7.119846 GGACAACAACTAGCTCAGTATTTGATT 59.880 37.037 15.76 3.89 36.04 2.57
8546 15522 8.396272 ACAACAACTAGCTCAGTATTTGATTT 57.604 30.769 15.76 1.90 36.04 2.17
8547 15523 8.292448 ACAACAACTAGCTCAGTATTTGATTTG 58.708 33.333 15.76 5.63 36.04 2.32
8548 15524 7.383102 ACAACTAGCTCAGTATTTGATTTGG 57.617 36.000 0.00 0.00 36.04 3.28
8549 15525 6.942576 ACAACTAGCTCAGTATTTGATTTGGT 59.057 34.615 0.00 0.00 36.04 3.67
8550 15526 6.992063 ACTAGCTCAGTATTTGATTTGGTG 57.008 37.500 0.00 0.00 34.98 4.17
8551 15527 6.711277 ACTAGCTCAGTATTTGATTTGGTGA 58.289 36.000 0.00 0.00 34.98 4.02
8552 15528 7.341805 ACTAGCTCAGTATTTGATTTGGTGAT 58.658 34.615 0.00 0.00 34.98 3.06
8553 15529 7.831193 ACTAGCTCAGTATTTGATTTGGTGATT 59.169 33.333 0.00 0.00 34.98 2.57
8554 15530 6.860080 AGCTCAGTATTTGATTTGGTGATTG 58.140 36.000 0.00 0.00 34.68 2.67
8618 15594 2.560981 CCAAACTTGGCCCGAGTTTAAT 59.439 45.455 25.30 4.85 43.68 1.40
8621 15597 4.948341 AACTTGGCCCGAGTTTAATTTT 57.052 36.364 10.79 0.00 34.77 1.82
8663 15639 4.652822 AGAACCCTAATTTGAACGAAGCT 58.347 39.130 0.00 0.00 0.00 3.74
8664 15640 4.455877 AGAACCCTAATTTGAACGAAGCTG 59.544 41.667 0.00 0.00 0.00 4.24
8665 15641 3.081804 ACCCTAATTTGAACGAAGCTGG 58.918 45.455 0.00 0.00 0.00 4.85
8666 15642 3.244770 ACCCTAATTTGAACGAAGCTGGA 60.245 43.478 0.00 0.00 0.00 3.86
8667 15643 3.375299 CCCTAATTTGAACGAAGCTGGAG 59.625 47.826 0.00 0.00 0.00 3.86
8668 15644 4.003648 CCTAATTTGAACGAAGCTGGAGT 58.996 43.478 0.00 0.00 0.00 3.85
8669 15645 4.455877 CCTAATTTGAACGAAGCTGGAGTT 59.544 41.667 0.00 0.00 0.00 3.01
8670 15646 4.918810 AATTTGAACGAAGCTGGAGTTT 57.081 36.364 0.00 0.00 0.00 2.66
8671 15647 6.148811 CCTAATTTGAACGAAGCTGGAGTTTA 59.851 38.462 0.00 0.00 0.00 2.01
8672 15648 6.385649 AATTTGAACGAAGCTGGAGTTTAA 57.614 33.333 0.00 0.00 0.00 1.52
8673 15649 6.575162 ATTTGAACGAAGCTGGAGTTTAAT 57.425 33.333 0.00 0.00 0.00 1.40
8674 15650 6.385649 TTTGAACGAAGCTGGAGTTTAATT 57.614 33.333 0.00 0.00 0.00 1.40
8675 15651 6.385649 TTGAACGAAGCTGGAGTTTAATTT 57.614 33.333 0.00 0.00 0.00 1.82
8676 15652 5.757886 TGAACGAAGCTGGAGTTTAATTTG 58.242 37.500 0.00 0.00 0.00 2.32
8677 15653 4.766404 ACGAAGCTGGAGTTTAATTTGG 57.234 40.909 0.00 0.00 0.00 3.28
8678 15654 4.394729 ACGAAGCTGGAGTTTAATTTGGA 58.605 39.130 0.00 0.00 0.00 3.53
8679 15655 4.215613 ACGAAGCTGGAGTTTAATTTGGAC 59.784 41.667 0.00 0.00 0.00 4.02
8680 15656 4.669197 CGAAGCTGGAGTTTAATTTGGACG 60.669 45.833 0.00 0.00 0.00 4.79
8681 15657 4.015872 AGCTGGAGTTTAATTTGGACGA 57.984 40.909 0.00 0.00 0.00 4.20
8682 15658 3.751698 AGCTGGAGTTTAATTTGGACGAC 59.248 43.478 0.00 0.00 0.00 4.34
8683 15659 3.119955 GCTGGAGTTTAATTTGGACGACC 60.120 47.826 0.00 0.00 0.00 4.79
8684 15660 3.414269 TGGAGTTTAATTTGGACGACCC 58.586 45.455 0.34 0.00 34.81 4.46
8685 15661 3.181442 TGGAGTTTAATTTGGACGACCCA 60.181 43.478 0.34 0.00 44.93 4.51
8686 15662 3.189910 GGAGTTTAATTTGGACGACCCAC 59.810 47.826 0.34 0.00 46.62 4.61
8687 15663 4.070009 GAGTTTAATTTGGACGACCCACT 58.930 43.478 0.34 0.00 46.62 4.00
8688 15664 4.466827 AGTTTAATTTGGACGACCCACTT 58.533 39.130 0.34 0.00 46.62 3.16
8689 15665 5.623169 AGTTTAATTTGGACGACCCACTTA 58.377 37.500 0.34 0.00 46.62 2.24
8705 15681 6.766429 ACCCACTTAAATCTAAAGAACGTCT 58.234 36.000 0.00 0.00 0.00 4.18
8706 15682 6.649557 ACCCACTTAAATCTAAAGAACGTCTG 59.350 38.462 0.00 0.00 0.00 3.51
8707 15683 6.402226 CCCACTTAAATCTAAAGAACGTCTGC 60.402 42.308 0.00 0.00 0.00 4.26
8708 15684 6.147164 CCACTTAAATCTAAAGAACGTCTGCA 59.853 38.462 0.00 0.00 0.00 4.41
8709 15685 7.148407 CCACTTAAATCTAAAGAACGTCTGCAT 60.148 37.037 0.00 0.00 0.00 3.96
8710 15686 8.230486 CACTTAAATCTAAAGAACGTCTGCATT 58.770 33.333 0.00 0.00 0.00 3.56
8711 15687 9.431887 ACTTAAATCTAAAGAACGTCTGCATTA 57.568 29.630 0.00 0.00 0.00 1.90
8718 15694 9.607285 TCTAAAGAACGTCTGCATTAAAATTTC 57.393 29.630 0.00 0.00 0.00 2.17
8719 15695 7.637709 AAAGAACGTCTGCATTAAAATTTCC 57.362 32.000 0.00 0.00 0.00 3.13
8720 15696 6.575162 AGAACGTCTGCATTAAAATTTCCT 57.425 33.333 0.00 0.00 0.00 3.36
8721 15697 6.981722 AGAACGTCTGCATTAAAATTTCCTT 58.018 32.000 0.00 0.00 0.00 3.36
8722 15698 7.084486 AGAACGTCTGCATTAAAATTTCCTTC 58.916 34.615 0.00 0.00 0.00 3.46
8723 15699 6.575162 ACGTCTGCATTAAAATTTCCTTCT 57.425 33.333 0.00 0.00 0.00 2.85
8724 15700 6.981722 ACGTCTGCATTAAAATTTCCTTCTT 58.018 32.000 0.00 0.00 0.00 2.52
8725 15701 7.084486 ACGTCTGCATTAAAATTTCCTTCTTC 58.916 34.615 0.00 0.00 0.00 2.87
8726 15702 6.528072 CGTCTGCATTAAAATTTCCTTCTTCC 59.472 38.462 0.00 0.00 0.00 3.46
8727 15703 7.378181 GTCTGCATTAAAATTTCCTTCTTCCA 58.622 34.615 0.00 0.00 0.00 3.53
8728 15704 8.037166 GTCTGCATTAAAATTTCCTTCTTCCAT 58.963 33.333 0.00 0.00 0.00 3.41
8729 15705 9.253832 TCTGCATTAAAATTTCCTTCTTCCATA 57.746 29.630 0.00 0.00 0.00 2.74
8730 15706 9.525409 CTGCATTAAAATTTCCTTCTTCCATAG 57.475 33.333 0.00 0.00 0.00 2.23
8731 15707 7.981225 TGCATTAAAATTTCCTTCTTCCATAGC 59.019 33.333 0.00 0.00 0.00 2.97
8732 15708 7.439356 GCATTAAAATTTCCTTCTTCCATAGCC 59.561 37.037 0.00 0.00 0.00 3.93
8733 15709 8.699130 CATTAAAATTTCCTTCTTCCATAGCCT 58.301 33.333 0.00 0.00 0.00 4.58
8734 15710 8.664669 TTAAAATTTCCTTCTTCCATAGCCTT 57.335 30.769 0.00 0.00 0.00 4.35
8735 15711 7.559335 AAAATTTCCTTCTTCCATAGCCTTT 57.441 32.000 0.00 0.00 0.00 3.11
8736 15712 8.664669 AAAATTTCCTTCTTCCATAGCCTTTA 57.335 30.769 0.00 0.00 0.00 1.85
8737 15713 8.664669 AAATTTCCTTCTTCCATAGCCTTTAA 57.335 30.769 0.00 0.00 0.00 1.52
8738 15714 8.844865 AATTTCCTTCTTCCATAGCCTTTAAT 57.155 30.769 0.00 0.00 0.00 1.40
8739 15715 8.844865 ATTTCCTTCTTCCATAGCCTTTAATT 57.155 30.769 0.00 0.00 0.00 1.40
8740 15716 8.664669 TTTCCTTCTTCCATAGCCTTTAATTT 57.335 30.769 0.00 0.00 0.00 1.82
8741 15717 7.645058 TCCTTCTTCCATAGCCTTTAATTTG 57.355 36.000 0.00 0.00 0.00 2.32
8769 15745 4.271049 GCATGTGCGAGCTCTATCTTTAAA 59.729 41.667 12.85 0.00 0.00 1.52
8770 15746 5.220662 GCATGTGCGAGCTCTATCTTTAAAA 60.221 40.000 12.85 0.00 0.00 1.52
8810 15788 1.352083 GTAGCTCATGGGGCTATGGA 58.648 55.000 18.91 2.46 42.98 3.41
8828 15806 4.771114 TGGATGTAACCATGGTAGGAAG 57.229 45.455 20.12 0.00 34.77 3.46
8830 15808 3.477530 GATGTAACCATGGTAGGAAGGC 58.522 50.000 20.12 4.22 0.00 4.35
8833 15811 1.372501 AACCATGGTAGGAAGGCTGT 58.627 50.000 20.12 0.00 0.00 4.40
8834 15812 1.372501 ACCATGGTAGGAAGGCTGTT 58.627 50.000 18.10 0.00 0.00 3.16
8836 15814 2.916934 ACCATGGTAGGAAGGCTGTTTA 59.083 45.455 18.10 0.00 0.00 2.01
8837 15815 3.054361 ACCATGGTAGGAAGGCTGTTTAG 60.054 47.826 18.10 0.00 0.00 1.85
8838 15816 3.545703 CATGGTAGGAAGGCTGTTTAGG 58.454 50.000 0.00 0.00 0.00 2.69
8859 15837 1.577468 CCCGTTTGTTTGGGCTTTTC 58.423 50.000 0.00 0.00 38.90 2.29
8863 15841 3.266636 CGTTTGTTTGGGCTTTTCCTTT 58.733 40.909 0.00 0.00 34.39 3.11
8865 15843 4.436718 CGTTTGTTTGGGCTTTTCCTTTTG 60.437 41.667 0.00 0.00 34.39 2.44
8874 15852 4.201910 GGGCTTTTCCTTTTGCAGTTTTTC 60.202 41.667 0.00 0.00 34.39 2.29
8875 15853 4.394610 GGCTTTTCCTTTTGCAGTTTTTCA 59.605 37.500 0.00 0.00 0.00 2.69
8876 15854 5.323900 GCTTTTCCTTTTGCAGTTTTTCAC 58.676 37.500 0.00 0.00 0.00 3.18
8877 15855 5.122239 GCTTTTCCTTTTGCAGTTTTTCACT 59.878 36.000 0.00 0.00 35.35 3.41
8881 15859 4.934602 TCCTTTTGCAGTTTTTCACTTTGG 59.065 37.500 0.00 0.00 30.92 3.28
8883 15861 3.325293 TTGCAGTTTTTCACTTTGGCA 57.675 38.095 0.00 0.00 30.92 4.92
8913 15891 4.705023 GGCACAAAAGCTTCTAAATAGGGA 59.295 41.667 0.00 0.00 34.17 4.20
8918 15896 7.809806 CACAAAAGCTTCTAAATAGGGACTTTG 59.190 37.037 0.00 0.00 41.75 2.77
8920 15898 7.454260 AAAGCTTCTAAATAGGGACTTTGTG 57.546 36.000 0.00 0.00 41.75 3.33
8921 15899 4.944317 AGCTTCTAAATAGGGACTTTGTGC 59.056 41.667 0.00 0.00 41.75 4.57
8922 15900 4.944317 GCTTCTAAATAGGGACTTTGTGCT 59.056 41.667 0.00 0.00 41.75 4.40
8924 15902 6.403746 GCTTCTAAATAGGGACTTTGTGCTTC 60.404 42.308 0.00 0.00 41.75 3.86
8925 15903 5.175859 TCTAAATAGGGACTTTGTGCTTCG 58.824 41.667 0.00 0.00 41.75 3.79
8927 15905 0.321298 TAGGGACTTTGTGCTTCGGC 60.321 55.000 0.00 0.00 41.75 5.54
8935 15913 1.919918 TTGTGCTTCGGCTTTTTGTG 58.080 45.000 0.00 0.00 42.37 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 4.948004 TGTTGTGTTAATGTGTTGGGTGTA 59.052 37.500 0.00 0.00 0.00 2.90
134 135 8.807118 GGAGGAAGTATGATTTTCTTTTTCCTT 58.193 33.333 4.17 0.00 42.24 3.36
135 136 7.121315 CGGAGGAAGTATGATTTTCTTTTTCCT 59.879 37.037 2.33 2.33 44.20 3.36
136 137 7.094334 ACGGAGGAAGTATGATTTTCTTTTTCC 60.094 37.037 0.00 0.00 34.48 3.13
137 138 7.817641 ACGGAGGAAGTATGATTTTCTTTTTC 58.182 34.615 0.00 0.00 0.00 2.29
140 141 5.880887 GGACGGAGGAAGTATGATTTTCTTT 59.119 40.000 0.00 0.00 0.00 2.52
203 204 9.239551 GTCCCAACCTTCAATTTTAGTATAACT 57.760 33.333 0.00 0.00 0.00 2.24
214 215 7.797121 AAGATAATTGTCCCAACCTTCAATT 57.203 32.000 0.00 0.00 41.36 2.32
245 246 8.541133 AATAAGAGCAAAACAAGTACTCTCTC 57.459 34.615 8.09 2.97 36.72 3.20
270 271 4.202080 GGTGGTCGTATGTTACTGCTCATA 60.202 45.833 0.00 0.00 0.00 2.15
304 305 4.221530 ACTATGTCATCTGGCAGATCTGA 58.778 43.478 26.62 20.41 31.32 3.27
348 349 2.376695 TAGGTATTGGGACGAGAGGG 57.623 55.000 0.00 0.00 0.00 4.30
384 385 4.056097 CGGTGCGCATTAAACTGC 57.944 55.556 15.91 0.00 38.81 4.40
415 416 2.284190 GCAACTCTCACTATGGGCTTC 58.716 52.381 0.00 0.00 0.00 3.86
423 424 1.476891 GATGACCGGCAACTCTCACTA 59.523 52.381 0.00 0.00 0.00 2.74
424 425 0.247736 GATGACCGGCAACTCTCACT 59.752 55.000 0.00 0.00 0.00 3.41
426 427 0.532573 GAGATGACCGGCAACTCTCA 59.467 55.000 20.83 9.97 41.66 3.27
437 438 7.277981 ACGTATGAAAACATAAGTGAGATGACC 59.722 37.037 0.00 0.00 30.69 4.02
439 440 7.201522 GCACGTATGAAAACATAAGTGAGATGA 60.202 37.037 26.76 0.00 44.50 2.92
450 451 1.804151 AGCGTGCACGTATGAAAACAT 59.196 42.857 36.80 10.24 42.22 2.71
451 452 1.070242 CAGCGTGCACGTATGAAAACA 60.070 47.619 36.80 0.00 42.22 2.83
452 453 1.193650 TCAGCGTGCACGTATGAAAAC 59.806 47.619 36.80 19.49 42.22 2.43
453 454 1.193650 GTCAGCGTGCACGTATGAAAA 59.806 47.619 34.77 20.21 42.22 2.29
458 459 1.153823 GGAGTCAGCGTGCACGTAT 60.154 57.895 36.80 24.63 42.22 3.06
507 512 2.660802 GTCATCGGGGTGAACGGT 59.339 61.111 0.00 0.00 0.00 4.83
510 515 2.125269 CGGGTCATCGGGGTGAAC 60.125 66.667 0.00 0.00 35.05 3.18
511 516 4.090588 GCGGGTCATCGGGGTGAA 62.091 66.667 0.00 0.00 0.00 3.18
564 576 3.011949 TCATTTTGCGTGGAAGCTTTC 57.988 42.857 0.00 0.00 38.13 2.62
632 654 8.476657 TGTCATCGTGTTTATCCGTTTATTTA 57.523 30.769 0.00 0.00 0.00 1.40
659 681 4.023193 CCTTTGTTTCTGTCCATTACGCTT 60.023 41.667 0.00 0.00 0.00 4.68
698 720 5.395214 CCTTTCTTGGGGGAAAATAAATCGG 60.395 44.000 0.00 0.00 35.22 4.18
868 910 6.716934 TTTTATTATTTATTGGGGCTGCGA 57.283 33.333 0.00 0.00 0.00 5.10
907 950 4.933330 TCGAATCGAGGACTAAGGAATTG 58.067 43.478 0.00 0.00 0.00 2.32
1260 1317 4.117661 GCGGGCGAGACGAAGACT 62.118 66.667 0.00 0.00 33.76 3.24
1525 1594 3.188880 ACCCAAACCCATCAACATCAT 57.811 42.857 0.00 0.00 0.00 2.45
1549 1618 2.084546 TCGCGTGAGAGAGAGATCAAA 58.915 47.619 5.77 0.00 34.08 2.69
1691 1764 5.047021 ACGGACAAGAGATGAGAAGAAATCA 60.047 40.000 0.00 0.00 0.00 2.57
1704 1777 4.884668 ATCCAGTTAAACGGACAAGAGA 57.115 40.909 0.00 0.00 33.05 3.10
1777 1894 8.659925 AGCATTGACAAACAAATTTATGTGAA 57.340 26.923 7.84 6.70 42.03 3.18
1778 1895 9.755804 TTAGCATTGACAAACAAATTTATGTGA 57.244 25.926 7.84 0.00 42.03 3.58
1821 1938 0.973632 CTGCCCCCTAAAACCCAAAC 59.026 55.000 0.00 0.00 0.00 2.93
1867 1987 1.812571 GTAACCACAGACCAATGCAGG 59.187 52.381 0.00 0.00 0.00 4.85
2060 2195 2.618045 GGTGTGGGGGTCAGTCAATTAG 60.618 54.545 0.00 0.00 0.00 1.73
2076 2211 3.583882 GATGGGGTGGGGTGGTGTG 62.584 68.421 0.00 0.00 0.00 3.82
2077 2212 3.264845 GATGGGGTGGGGTGGTGT 61.265 66.667 0.00 0.00 0.00 4.16
2078 2213 4.424711 CGATGGGGTGGGGTGGTG 62.425 72.222 0.00 0.00 0.00 4.17
2082 2217 1.306296 CAAATCGATGGGGTGGGGT 59.694 57.895 0.00 0.00 0.00 4.95
2083 2218 2.127232 GCAAATCGATGGGGTGGGG 61.127 63.158 0.00 0.00 0.00 4.96
2084 2219 1.379710 TGCAAATCGATGGGGTGGG 60.380 57.895 0.00 0.00 0.00 4.61
2085 2220 1.386525 CCTGCAAATCGATGGGGTGG 61.387 60.000 0.00 0.00 0.00 4.61
2086 2221 0.680921 ACCTGCAAATCGATGGGGTG 60.681 55.000 0.00 0.00 0.00 4.61
2087 2222 0.394352 GACCTGCAAATCGATGGGGT 60.394 55.000 0.00 3.23 0.00 4.95
2256 2624 9.531942 TGTCATGCAATATTTTAAGCCATTAAG 57.468 29.630 0.00 0.00 32.58 1.85
2288 2656 9.599866 TGTCAAGATGATGTATTCGACTTAAAT 57.400 29.630 0.00 0.00 0.00 1.40
2371 2746 6.481984 CGCCACAAAATACAAACAAAAATGT 58.518 32.000 0.00 0.00 0.00 2.71
2395 2770 1.613437 ACAAACCCATACTTGCTGTGC 59.387 47.619 0.00 0.00 0.00 4.57
2419 2796 8.758633 AGTCATATTTGTACAACTGTAGTCAC 57.241 34.615 8.07 1.24 0.00 3.67
2661 3131 1.841663 GCAGGTACAAGTGTGGCACG 61.842 60.000 13.77 0.49 39.64 5.34
2811 3292 5.695816 GCAACATAAGATGATCTCTCTGTCC 59.304 44.000 0.00 0.00 31.82 4.02
2970 3467 7.117285 TGATAGATCAGTAACACTTGAGCAT 57.883 36.000 0.00 0.00 32.11 3.79
3073 3571 5.818678 ATAGGGATATAACGCCTGTTTCA 57.181 39.130 0.00 0.00 39.54 2.69
3117 3617 7.935210 CGGTGTATAGGGATATAACACCTTTTT 59.065 37.037 17.90 0.25 42.65 1.94
3118 3618 7.290714 TCGGTGTATAGGGATATAACACCTTTT 59.709 37.037 17.90 2.07 42.65 2.27
3119 3619 6.783977 TCGGTGTATAGGGATATAACACCTTT 59.216 38.462 17.90 4.71 42.65 3.11
3120 3620 6.317312 TCGGTGTATAGGGATATAACACCTT 58.683 40.000 17.90 2.67 42.65 3.50
3121 3621 5.895807 TCGGTGTATAGGGATATAACACCT 58.104 41.667 17.90 8.24 42.65 4.00
3122 3622 5.713861 ACTCGGTGTATAGGGATATAACACC 59.286 44.000 11.91 11.91 41.74 4.16
3123 3623 6.830873 ACTCGGTGTATAGGGATATAACAC 57.169 41.667 0.00 0.00 0.00 3.32
3124 3624 7.844493 AAACTCGGTGTATAGGGATATAACA 57.156 36.000 0.00 0.00 0.00 2.41
3127 3627 8.526147 GCTTTAAACTCGGTGTATAGGGATATA 58.474 37.037 0.00 0.00 0.00 0.86
3128 3628 7.384477 GCTTTAAACTCGGTGTATAGGGATAT 58.616 38.462 0.00 0.00 0.00 1.63
3239 3739 3.107642 AGGGATATAACGCCTGTTTCG 57.892 47.619 0.00 0.00 39.54 3.46
3279 3800 1.670811 GCACAGCTATTTACGCCACAT 59.329 47.619 0.00 0.00 0.00 3.21
3285 3806 7.069569 GGTGTATTTATGCACAGCTATTTACG 58.930 38.462 12.02 0.00 43.87 3.18
3405 3929 9.289303 GTGCAAAAGATGGTTATAACATTACTG 57.711 33.333 17.16 6.49 0.00 2.74
3482 4007 3.417185 GGCGAACTCGATAAAAGCAAAG 58.583 45.455 2.69 0.00 43.02 2.77
3684 4209 2.890945 AGGAAGAAATTTGGGGTTCACG 59.109 45.455 0.00 0.00 0.00 4.35
3715 4240 9.638300 CAGAAAACTATGCGACTAAATATGTTC 57.362 33.333 0.00 0.00 0.00 3.18
3729 4254 6.036408 GGATCCAAATTTGCAGAAAACTATGC 59.964 38.462 12.92 0.00 42.86 3.14
3760 4297 3.944087 ACAGAGCTTGGAAATCACCTAC 58.056 45.455 0.00 0.00 0.00 3.18
3780 4317 9.883142 AGAGCAGATTCAGGCTAATATTATTAC 57.117 33.333 3.23 0.00 41.22 1.89
3822 4359 5.395324 GGATACCATTTCTTTCTCGTCCTCA 60.395 44.000 0.00 0.00 0.00 3.86
3938 4475 3.181445 TGCAGGCTTTCGGGATACATATT 60.181 43.478 0.00 0.00 39.74 1.28
4026 4565 9.398538 AGGTTACTAAGTTTACAATCACAACAA 57.601 29.630 0.00 0.00 0.00 2.83
4028 4567 9.048446 TCAGGTTACTAAGTTTACAATCACAAC 57.952 33.333 0.00 0.00 0.00 3.32
4041 4580 9.893975 ACCTAATACCATATCAGGTTACTAAGT 57.106 33.333 0.00 0.00 43.08 2.24
4219 4761 6.648879 ATCTGATTTAGACTCTGCCTAGTC 57.351 41.667 7.32 7.32 45.20 2.59
4228 4774 8.037758 TCTGAAAGGACAATCTGATTTAGACTC 58.962 37.037 0.00 0.00 38.49 3.36
4237 4794 4.067896 GCAAGTCTGAAAGGACAATCTGA 58.932 43.478 0.00 0.00 38.57 3.27
4246 4803 9.512435 CTGAAATTTATATGCAAGTCTGAAAGG 57.488 33.333 0.00 0.00 0.00 3.11
4327 4885 8.691661 ACAAAATCTGGTAGACACATAAACTT 57.308 30.769 0.00 0.00 0.00 2.66
4501 6625 3.641437 TTCGAATTGTCCTTTGGCTTG 57.359 42.857 0.00 0.00 0.00 4.01
4518 6642 6.119144 AGGATGTTTGGATTTATCGTTTCG 57.881 37.500 0.00 0.00 0.00 3.46
4534 6658 4.277476 TCACCAAAGAACACAAGGATGTT 58.723 39.130 0.00 0.00 45.52 2.71
4561 6689 6.189859 ACAATCACCATATCAAACTCCATGT 58.810 36.000 0.00 0.00 0.00 3.21
4564 6692 7.201812 GCAATACAATCACCATATCAAACTCCA 60.202 37.037 0.00 0.00 0.00 3.86
4893 7033 5.047802 CAGCATTTGGAAGGTCAAACAGTAT 60.048 40.000 0.00 0.00 39.13 2.12
4909 7049 5.075858 TCCAAGGAAATTAGCAGCATTTG 57.924 39.130 0.00 0.00 0.00 2.32
4928 7068 7.173032 TCTATTTATCTACGCTATCCACTCCA 58.827 38.462 0.00 0.00 0.00 3.86
5162 7312 5.927689 TGACATTGCAAAGGAATGATCAAAC 59.072 36.000 16.40 0.00 35.23 2.93
5267 7444 5.694910 GGAAAACAGAAGATACGTGTGAAGA 59.305 40.000 0.00 0.00 0.00 2.87
5380 7557 6.701841 TCATGACAAGAAGTTGAAGTACTGTC 59.298 38.462 0.00 0.00 37.10 3.51
5559 7860 1.593296 GGCTGCTGCTTTCCAGAAGG 61.593 60.000 15.64 0.00 45.97 3.46
5567 7868 2.295885 GTATGAGATGGCTGCTGCTTT 58.704 47.619 15.64 3.08 39.59 3.51
5606 7907 4.397103 GGGGATTAAAACGAAACTAGTGGG 59.603 45.833 0.00 0.00 0.00 4.61
5632 7933 3.489785 GGGAATAACACAGAATCTACGCG 59.510 47.826 3.53 3.53 0.00 6.01
5633 7934 4.694339 AGGGAATAACACAGAATCTACGC 58.306 43.478 0.00 0.00 0.00 4.42
5634 7935 6.338146 TGAAGGGAATAACACAGAATCTACG 58.662 40.000 0.00 0.00 0.00 3.51
5689 7990 1.399343 CGTGATGTTCTGCAGTTGCTG 60.399 52.381 14.67 5.19 42.66 4.41
5696 7997 1.338105 CCCTCTTCGTGATGTTCTGCA 60.338 52.381 0.00 0.00 0.00 4.41
5708 8009 2.609427 TGCATTCTGATCCCTCTTCG 57.391 50.000 0.00 0.00 0.00 3.79
5713 8014 5.021458 AGAACAAAATGCATTCTGATCCCT 58.979 37.500 19.43 7.29 31.47 4.20
5765 8067 7.112779 ACATGTTTTTACAAATTTTGGGTGGA 58.887 30.769 13.42 0.00 34.12 4.02
5939 9649 7.229106 TGTCAATTTCATGATCTGTCAGAAACA 59.771 33.333 6.64 10.63 37.87 2.83
6018 9736 5.086104 AGATAAGTTAATGTCCGTGCAGT 57.914 39.130 0.00 0.00 0.00 4.40
6063 9781 8.410912 GTTACACCATATAGTACACATCACTCA 58.589 37.037 0.00 0.00 0.00 3.41
6107 9825 5.976458 TGAAATCACAAAAGAAAAGGTGCT 58.024 33.333 0.00 0.00 0.00 4.40
6159 9888 6.043243 GGGGAGAAATCAGATAGATGTGGTTA 59.957 42.308 0.00 0.00 36.96 2.85
6225 9973 7.832685 ACTAAGGGGTTACTTTTGACCATAATC 59.167 37.037 0.00 0.00 37.68 1.75
6231 9979 5.238624 AGACTAAGGGGTTACTTTTGACC 57.761 43.478 0.00 0.00 35.14 4.02
6234 9982 6.616237 TCCTAGACTAAGGGGTTACTTTTG 57.384 41.667 0.00 0.00 37.24 2.44
6287 10038 7.025963 GTCAATCAGCTTATGGCAATATTAGC 58.974 38.462 0.00 0.00 44.79 3.09
6289 10040 8.462589 TTGTCAATCAGCTTATGGCAATATTA 57.537 30.769 6.18 0.00 44.79 0.98
6317 10068 7.067494 GCAGTTACCAGTTAATGATTTCCTGAT 59.933 37.037 5.63 0.00 0.00 2.90
6328 10079 3.975168 ACCGAGCAGTTACCAGTTAAT 57.025 42.857 0.00 0.00 0.00 1.40
6426 10177 3.369052 CCGATAGAACAGTTAAGTGGCCA 60.369 47.826 14.69 0.00 39.76 5.36
6454 10205 6.753744 GGGAATCAATCAGTAATGCTCAAAAC 59.246 38.462 0.00 0.00 0.00 2.43
6466 10217 6.608405 TGCAAAGAATATGGGAATCAATCAGT 59.392 34.615 0.00 0.00 0.00 3.41
6507 10258 2.158608 GGCTTAGGTGGTGGCATAGAAT 60.159 50.000 0.00 0.00 0.00 2.40
6608 10408 4.186077 TCCACATTTCCACCCAACTAAA 57.814 40.909 0.00 0.00 0.00 1.85
6756 10566 7.770897 AGGTAGGACAGTATCACATTTTGAATC 59.229 37.037 0.00 0.00 37.92 2.52
6832 10726 8.017251 ACCAGTAACCCAGGAATATAATAGAGT 58.983 37.037 0.00 0.00 0.00 3.24
6876 10771 6.467677 GGACCAATCAGCTTATAGCAAGATA 58.532 40.000 1.09 0.00 45.56 1.98
6897 10792 0.389817 GGCGCAAAGAAAATGGGGAC 60.390 55.000 10.83 0.00 0.00 4.46
6971 10866 7.710896 AGAACGTTTTTGACACTACTAGTAGT 58.289 34.615 26.61 26.61 46.52 2.73
6972 10867 8.571461 AAGAACGTTTTTGACACTACTAGTAG 57.429 34.615 25.30 25.30 39.04 2.57
6981 10876 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
6982 10877 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
6983 10878 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
6984 10879 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
6985 10880 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
6986 10881 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
6987 10882 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
6988 10883 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
6989 10884 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
6990 10885 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
6991 10886 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
6992 10887 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
6993 10888 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
6994 10889 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
6995 10890 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
6996 10891 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
6997 10892 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
6998 10893 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
6999 10894 3.400322 AGTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
7000 10895 2.179424 AGTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
7001 10896 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
7002 10897 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
7003 10898 1.133544 GTAGTACTCCCTCCGTCCCAT 60.134 57.143 0.00 0.00 0.00 4.00
7004 10899 0.257039 GTAGTACTCCCTCCGTCCCA 59.743 60.000 0.00 0.00 0.00 4.37
7005 10900 0.467106 GGTAGTACTCCCTCCGTCCC 60.467 65.000 0.00 0.00 0.00 4.46
7006 10901 0.550432 AGGTAGTACTCCCTCCGTCC 59.450 60.000 0.11 0.00 0.00 4.79
7007 10902 3.118075 ACTTAGGTAGTACTCCCTCCGTC 60.118 52.174 10.79 0.00 34.56 4.79
7008 10903 2.849318 ACTTAGGTAGTACTCCCTCCGT 59.151 50.000 10.79 6.53 34.56 4.69
7009 10904 3.475575 GACTTAGGTAGTACTCCCTCCG 58.524 54.545 10.79 5.90 37.17 4.63
7010 10905 3.436325 GGGACTTAGGTAGTACTCCCTCC 60.436 56.522 10.79 6.14 37.87 4.30
7011 10906 3.203934 TGGGACTTAGGTAGTACTCCCTC 59.796 52.174 10.79 0.00 38.61 4.30
7012 10907 3.204760 TGGGACTTAGGTAGTACTCCCT 58.795 50.000 19.92 12.22 38.61 4.20
7013 10908 3.677156 TGGGACTTAGGTAGTACTCCC 57.323 52.381 14.83 14.83 37.87 4.30
7014 10909 7.852550 ATATTTGGGACTTAGGTAGTACTCC 57.147 40.000 0.00 0.48 37.87 3.85
7015 10910 8.510505 CGTATATTTGGGACTTAGGTAGTACTC 58.489 40.741 0.00 0.00 37.87 2.59
7016 10911 8.220559 TCGTATATTTGGGACTTAGGTAGTACT 58.779 37.037 0.00 0.00 37.87 2.73
7038 10933 4.311606 TGCACACTTTCTAAAGCATCGTA 58.688 39.130 2.37 0.00 39.63 3.43
7289 13609 5.815740 TGAAACTTTCCAAGTGACTAGACAC 59.184 40.000 16.23 16.23 41.91 3.67
7290 13610 5.984725 TGAAACTTTCCAAGTGACTAGACA 58.015 37.500 0.00 0.00 41.91 3.41
7488 13893 8.616076 GTGCTTATAAGAAATGTAGAGTGCAAT 58.384 33.333 16.85 0.00 0.00 3.56
7615 14560 3.988379 ATGCTGACACACAAACGAAAT 57.012 38.095 0.00 0.00 0.00 2.17
7741 14707 7.136822 TCCTTCTGCCTACATGTACAAATAT 57.863 36.000 0.08 0.00 0.00 1.28
7807 14773 1.073722 TGCTTGCCTGACAGGAAGG 59.926 57.895 26.25 16.84 37.67 3.46
7876 14844 1.710013 AACAGTTGAGTACATCGCCG 58.290 50.000 0.00 0.00 0.00 6.46
7959 14927 1.010935 AGACTCAGTGCAACATCGCG 61.011 55.000 0.00 0.00 41.43 5.87
7967 14935 0.593618 GACGAGACAGACTCAGTGCA 59.406 55.000 0.74 0.00 45.14 4.57
8367 15341 7.703058 ACAGTCAAATACCCCAAAAAGATAG 57.297 36.000 0.00 0.00 0.00 2.08
8427 15401 6.419710 CGGGTTTTCTAAATTTGTGAGAAACC 59.580 38.462 22.76 22.76 38.56 3.27
8428 15402 7.197703 TCGGGTTTTCTAAATTTGTGAGAAAC 58.802 34.615 12.18 14.07 38.56 2.78
8429 15403 7.336161 TCGGGTTTTCTAAATTTGTGAGAAA 57.664 32.000 9.54 9.54 37.41 2.52
8430 15404 6.945938 TCGGGTTTTCTAAATTTGTGAGAA 57.054 33.333 0.00 0.00 0.00 2.87
8431 15405 7.229707 TGAATCGGGTTTTCTAAATTTGTGAGA 59.770 33.333 0.00 0.00 0.00 3.27
8432 15406 7.326063 GTGAATCGGGTTTTCTAAATTTGTGAG 59.674 37.037 0.00 0.00 0.00 3.51
8433 15407 7.142680 GTGAATCGGGTTTTCTAAATTTGTGA 58.857 34.615 0.00 0.00 0.00 3.58
8434 15408 6.920758 TGTGAATCGGGTTTTCTAAATTTGTG 59.079 34.615 0.00 0.00 0.00 3.33
8435 15409 7.045126 TGTGAATCGGGTTTTCTAAATTTGT 57.955 32.000 0.00 0.00 0.00 2.83
8436 15410 7.598493 ACATGTGAATCGGGTTTTCTAAATTTG 59.402 33.333 0.00 0.00 0.00 2.32
8437 15411 7.666623 ACATGTGAATCGGGTTTTCTAAATTT 58.333 30.769 0.00 0.00 0.00 1.82
8438 15412 7.227049 ACATGTGAATCGGGTTTTCTAAATT 57.773 32.000 0.00 0.00 0.00 1.82
8439 15413 6.834168 ACATGTGAATCGGGTTTTCTAAAT 57.166 33.333 0.00 0.00 0.00 1.40
8440 15414 7.627513 GCATACATGTGAATCGGGTTTTCTAAA 60.628 37.037 9.11 0.00 0.00 1.85
8441 15415 6.183360 GCATACATGTGAATCGGGTTTTCTAA 60.183 38.462 9.11 0.00 0.00 2.10
8451 15425 2.831116 GATGCGCATACATGTGAATCG 58.169 47.619 25.40 7.83 41.86 3.34
8486 15462 3.247442 CGTACATAAAAGTCTGTGCCGA 58.753 45.455 0.00 0.00 0.00 5.54
8487 15463 2.991190 ACGTACATAAAAGTCTGTGCCG 59.009 45.455 0.00 0.00 0.00 5.69
8488 15464 5.404946 TCTACGTACATAAAAGTCTGTGCC 58.595 41.667 0.00 0.00 0.00 5.01
8510 15486 6.874134 TGAGCTAGTTGTTGTCCTATTTCTTC 59.126 38.462 0.00 0.00 0.00 2.87
8511 15487 6.769512 TGAGCTAGTTGTTGTCCTATTTCTT 58.230 36.000 0.00 0.00 0.00 2.52
8512 15488 6.014156 ACTGAGCTAGTTGTTGTCCTATTTCT 60.014 38.462 0.00 0.00 35.67 2.52
8513 15489 6.166982 ACTGAGCTAGTTGTTGTCCTATTTC 58.833 40.000 0.00 0.00 35.67 2.17
8514 15490 6.115448 ACTGAGCTAGTTGTTGTCCTATTT 57.885 37.500 0.00 0.00 35.67 1.40
8515 15491 5.746990 ACTGAGCTAGTTGTTGTCCTATT 57.253 39.130 0.00 0.00 35.67 1.73
8516 15492 7.425224 AATACTGAGCTAGTTGTTGTCCTAT 57.575 36.000 0.00 0.00 40.89 2.57
8517 15493 6.852420 AATACTGAGCTAGTTGTTGTCCTA 57.148 37.500 0.00 0.00 40.89 2.94
8518 15494 5.746990 AATACTGAGCTAGTTGTTGTCCT 57.253 39.130 0.00 0.00 40.89 3.85
8519 15495 5.932303 TCAAATACTGAGCTAGTTGTTGTCC 59.068 40.000 0.00 0.00 40.89 4.02
8520 15496 7.602517 ATCAAATACTGAGCTAGTTGTTGTC 57.397 36.000 0.00 0.00 40.89 3.18
8521 15497 7.986085 AATCAAATACTGAGCTAGTTGTTGT 57.014 32.000 0.00 0.00 40.89 3.32
8522 15498 7.752239 CCAAATCAAATACTGAGCTAGTTGTTG 59.248 37.037 0.00 0.21 40.89 3.33
8523 15499 7.448469 ACCAAATCAAATACTGAGCTAGTTGTT 59.552 33.333 0.00 0.00 40.89 2.83
8524 15500 6.942576 ACCAAATCAAATACTGAGCTAGTTGT 59.057 34.615 0.00 0.00 40.89 3.32
8525 15501 7.119699 TCACCAAATCAAATACTGAGCTAGTTG 59.880 37.037 0.00 0.00 40.89 3.16
8526 15502 7.168219 TCACCAAATCAAATACTGAGCTAGTT 58.832 34.615 0.00 0.00 40.89 2.24
8527 15503 6.711277 TCACCAAATCAAATACTGAGCTAGT 58.289 36.000 0.00 0.00 43.56 2.57
8528 15504 7.798596 ATCACCAAATCAAATACTGAGCTAG 57.201 36.000 0.00 0.00 37.52 3.42
8529 15505 7.067372 CCAATCACCAAATCAAATACTGAGCTA 59.933 37.037 0.00 0.00 37.52 3.32
8530 15506 6.127535 CCAATCACCAAATCAAATACTGAGCT 60.128 38.462 0.00 0.00 37.52 4.09
8531 15507 6.038356 CCAATCACCAAATCAAATACTGAGC 58.962 40.000 0.00 0.00 37.52 4.26
8532 15508 6.567050 CCCAATCACCAAATCAAATACTGAG 58.433 40.000 0.00 0.00 37.52 3.35
8533 15509 5.105392 GCCCAATCACCAAATCAAATACTGA 60.105 40.000 0.00 0.00 38.81 3.41
8534 15510 5.111293 GCCCAATCACCAAATCAAATACTG 58.889 41.667 0.00 0.00 0.00 2.74
8535 15511 4.776837 TGCCCAATCACCAAATCAAATACT 59.223 37.500 0.00 0.00 0.00 2.12
8536 15512 5.083533 TGCCCAATCACCAAATCAAATAC 57.916 39.130 0.00 0.00 0.00 1.89
8537 15513 5.954153 ATGCCCAATCACCAAATCAAATA 57.046 34.783 0.00 0.00 0.00 1.40
8538 15514 4.847990 ATGCCCAATCACCAAATCAAAT 57.152 36.364 0.00 0.00 0.00 2.32
8539 15515 4.565236 GGAATGCCCAATCACCAAATCAAA 60.565 41.667 0.00 0.00 34.14 2.69
8540 15516 3.055240 GGAATGCCCAATCACCAAATCAA 60.055 43.478 0.00 0.00 34.14 2.57
8541 15517 2.500910 GGAATGCCCAATCACCAAATCA 59.499 45.455 0.00 0.00 34.14 2.57
8542 15518 2.500910 TGGAATGCCCAATCACCAAATC 59.499 45.455 0.00 0.00 43.29 2.17
8543 15519 2.502538 CTGGAATGCCCAATCACCAAAT 59.497 45.455 0.00 0.00 46.07 2.32
8544 15520 1.901159 CTGGAATGCCCAATCACCAAA 59.099 47.619 0.00 0.00 46.07 3.28
8545 15521 1.559368 CTGGAATGCCCAATCACCAA 58.441 50.000 0.00 0.00 46.07 3.67
8546 15522 0.971959 GCTGGAATGCCCAATCACCA 60.972 55.000 0.00 0.00 46.07 4.17
8547 15523 1.679559 GGCTGGAATGCCCAATCACC 61.680 60.000 0.00 0.00 46.07 4.02
8548 15524 1.818555 GGCTGGAATGCCCAATCAC 59.181 57.895 0.00 0.00 46.07 3.06
8549 15525 4.360643 GGCTGGAATGCCCAATCA 57.639 55.556 0.00 0.00 46.07 2.57
8621 15597 8.475639 GGGTTCTTTAGATAGAAGTACATGTCA 58.524 37.037 0.00 0.00 34.95 3.58
8663 15639 3.181442 TGGGTCGTCCAAATTAAACTCCA 60.181 43.478 0.04 0.00 43.84 3.86
8664 15640 3.414269 TGGGTCGTCCAAATTAAACTCC 58.586 45.455 0.04 0.00 43.84 3.85
8675 15651 5.246656 TCTTTAGATTTAAGTGGGTCGTCCA 59.753 40.000 0.04 0.00 44.79 4.02
8676 15652 5.727434 TCTTTAGATTTAAGTGGGTCGTCC 58.273 41.667 0.00 0.00 0.00 4.79
8677 15653 6.183360 CGTTCTTTAGATTTAAGTGGGTCGTC 60.183 42.308 0.00 0.00 0.00 4.20
8678 15654 5.636543 CGTTCTTTAGATTTAAGTGGGTCGT 59.363 40.000 0.00 0.00 0.00 4.34
8679 15655 5.636543 ACGTTCTTTAGATTTAAGTGGGTCG 59.363 40.000 0.00 0.00 0.00 4.79
8680 15656 6.872547 AGACGTTCTTTAGATTTAAGTGGGTC 59.127 38.462 0.00 0.00 0.00 4.46
8681 15657 6.649557 CAGACGTTCTTTAGATTTAAGTGGGT 59.350 38.462 0.00 0.00 0.00 4.51
8682 15658 6.402226 GCAGACGTTCTTTAGATTTAAGTGGG 60.402 42.308 0.00 0.00 0.00 4.61
8683 15659 6.147164 TGCAGACGTTCTTTAGATTTAAGTGG 59.853 38.462 0.00 0.00 0.00 4.00
8684 15660 7.117241 TGCAGACGTTCTTTAGATTTAAGTG 57.883 36.000 0.00 0.00 0.00 3.16
8685 15661 7.907214 ATGCAGACGTTCTTTAGATTTAAGT 57.093 32.000 0.00 0.00 0.00 2.24
8705 15681 7.981225 GCTATGGAAGAAGGAAATTTTAATGCA 59.019 33.333 0.00 0.00 0.00 3.96
8706 15682 7.439356 GGCTATGGAAGAAGGAAATTTTAATGC 59.561 37.037 0.00 0.00 0.00 3.56
8707 15683 8.699130 AGGCTATGGAAGAAGGAAATTTTAATG 58.301 33.333 0.00 0.00 0.00 1.90
8708 15684 8.844865 AGGCTATGGAAGAAGGAAATTTTAAT 57.155 30.769 0.00 0.00 0.00 1.40
8709 15685 8.664669 AAGGCTATGGAAGAAGGAAATTTTAA 57.335 30.769 0.00 0.00 0.00 1.52
8710 15686 8.664669 AAAGGCTATGGAAGAAGGAAATTTTA 57.335 30.769 0.00 0.00 0.00 1.52
8711 15687 7.559335 AAAGGCTATGGAAGAAGGAAATTTT 57.441 32.000 0.00 0.00 0.00 1.82
8712 15688 8.664669 TTAAAGGCTATGGAAGAAGGAAATTT 57.335 30.769 0.00 0.00 0.00 1.82
8713 15689 8.844865 ATTAAAGGCTATGGAAGAAGGAAATT 57.155 30.769 0.00 0.00 0.00 1.82
8715 15691 8.531146 CAAATTAAAGGCTATGGAAGAAGGAAA 58.469 33.333 0.00 0.00 0.00 3.13
8716 15692 7.893302 TCAAATTAAAGGCTATGGAAGAAGGAA 59.107 33.333 0.00 0.00 0.00 3.36
8717 15693 7.410174 TCAAATTAAAGGCTATGGAAGAAGGA 58.590 34.615 0.00 0.00 0.00 3.36
8718 15694 7.340487 ACTCAAATTAAAGGCTATGGAAGAAGG 59.660 37.037 0.00 0.00 0.00 3.46
8719 15695 8.186821 CACTCAAATTAAAGGCTATGGAAGAAG 58.813 37.037 0.00 0.00 0.00 2.85
8720 15696 7.122650 CCACTCAAATTAAAGGCTATGGAAGAA 59.877 37.037 0.00 0.00 0.00 2.52
8721 15697 6.603201 CCACTCAAATTAAAGGCTATGGAAGA 59.397 38.462 0.00 0.00 0.00 2.87
8722 15698 6.681368 GCCACTCAAATTAAAGGCTATGGAAG 60.681 42.308 0.00 0.00 39.02 3.46
8723 15699 5.127031 GCCACTCAAATTAAAGGCTATGGAA 59.873 40.000 0.00 0.00 39.02 3.53
8724 15700 4.644685 GCCACTCAAATTAAAGGCTATGGA 59.355 41.667 0.00 0.00 39.02 3.41
8725 15701 4.402155 TGCCACTCAAATTAAAGGCTATGG 59.598 41.667 0.00 0.00 42.46 2.74
8726 15702 5.581126 TGCCACTCAAATTAAAGGCTATG 57.419 39.130 0.00 0.00 42.46 2.23
8727 15703 5.658190 ACATGCCACTCAAATTAAAGGCTAT 59.342 36.000 0.00 0.00 42.46 2.97
8728 15704 5.016173 ACATGCCACTCAAATTAAAGGCTA 58.984 37.500 0.00 0.00 42.46 3.93
8729 15705 3.834231 ACATGCCACTCAAATTAAAGGCT 59.166 39.130 0.00 0.00 42.46 4.58
8730 15706 3.928375 CACATGCCACTCAAATTAAAGGC 59.072 43.478 0.00 0.00 42.32 4.35
8731 15707 3.928375 GCACATGCCACTCAAATTAAAGG 59.072 43.478 0.00 0.00 34.31 3.11
8732 15708 3.609373 CGCACATGCCACTCAAATTAAAG 59.391 43.478 0.00 0.00 37.91 1.85
8733 15709 3.254411 TCGCACATGCCACTCAAATTAAA 59.746 39.130 0.00 0.00 37.91 1.52
8734 15710 2.816672 TCGCACATGCCACTCAAATTAA 59.183 40.909 0.00 0.00 37.91 1.40
8735 15711 2.419673 CTCGCACATGCCACTCAAATTA 59.580 45.455 0.00 0.00 37.91 1.40
8736 15712 1.200716 CTCGCACATGCCACTCAAATT 59.799 47.619 0.00 0.00 37.91 1.82
8737 15713 0.806868 CTCGCACATGCCACTCAAAT 59.193 50.000 0.00 0.00 37.91 2.32
8738 15714 1.855213 GCTCGCACATGCCACTCAAA 61.855 55.000 0.00 0.00 37.91 2.69
8739 15715 2.327343 GCTCGCACATGCCACTCAA 61.327 57.895 0.00 0.00 37.91 3.02
8740 15716 2.743538 GCTCGCACATGCCACTCA 60.744 61.111 0.00 0.00 37.91 3.41
8741 15717 2.435586 AGCTCGCACATGCCACTC 60.436 61.111 0.00 0.00 37.91 3.51
8769 15745 8.507249 GCTACACATGTTCAAGTTCTAGAAATT 58.493 33.333 12.23 12.23 0.00 1.82
8770 15746 7.880195 AGCTACACATGTTCAAGTTCTAGAAAT 59.120 33.333 6.78 2.45 0.00 2.17
8810 15788 3.117888 CAGCCTTCCTACCATGGTTACAT 60.118 47.826 25.38 0.00 37.99 2.29
8830 15808 1.324383 AACAAACGGGGCCTAAACAG 58.676 50.000 0.84 0.00 0.00 3.16
8833 15811 1.041437 CCAAACAAACGGGGCCTAAA 58.959 50.000 0.84 0.00 0.00 1.85
8834 15812 0.828343 CCCAAACAAACGGGGCCTAA 60.828 55.000 0.84 0.00 38.95 2.69
8836 15814 2.523168 CCCAAACAAACGGGGCCT 60.523 61.111 0.84 0.00 38.95 5.19
8839 15817 0.179234 AAAAGCCCAAACAAACGGGG 59.821 50.000 0.00 0.00 43.31 5.73
8840 15818 1.577468 GAAAAGCCCAAACAAACGGG 58.423 50.000 0.00 0.00 46.15 5.28
8841 15819 1.138069 AGGAAAAGCCCAAACAAACGG 59.862 47.619 0.00 0.00 37.37 4.44
8842 15820 2.595124 AGGAAAAGCCCAAACAAACG 57.405 45.000 0.00 0.00 37.37 3.60
8859 15837 4.437255 GCCAAAGTGAAAAACTGCAAAAGG 60.437 41.667 0.00 0.00 39.81 3.11
8863 15841 3.325293 TGCCAAAGTGAAAAACTGCAA 57.675 38.095 0.00 0.00 39.81 4.08
8865 15843 4.676849 TTTTGCCAAAGTGAAAAACTGC 57.323 36.364 0.00 0.00 39.81 4.40
8891 15869 5.416013 AGTCCCTATTTAGAAGCTTTTGTGC 59.584 40.000 0.00 0.00 0.00 4.57
8894 15872 7.809806 CACAAAGTCCCTATTTAGAAGCTTTTG 59.190 37.037 0.00 0.00 0.00 2.44
8908 15886 0.321298 GCCGAAGCACAAAGTCCCTA 60.321 55.000 0.00 0.00 39.53 3.53
8913 15891 2.094234 ACAAAAAGCCGAAGCACAAAGT 60.094 40.909 0.00 0.00 43.56 2.66
8918 15896 1.921243 AACACAAAAAGCCGAAGCAC 58.079 45.000 0.00 0.00 43.56 4.40
8920 15898 3.896122 TCATAACACAAAAAGCCGAAGC 58.104 40.909 0.00 0.00 40.32 3.86
8921 15899 6.148948 TGATTCATAACACAAAAAGCCGAAG 58.851 36.000 0.00 0.00 0.00 3.79
8922 15900 6.078202 TGATTCATAACACAAAAAGCCGAA 57.922 33.333 0.00 0.00 0.00 4.30
8924 15902 6.949578 ATTGATTCATAACACAAAAAGCCG 57.050 33.333 0.00 0.00 0.00 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.