Multiple sequence alignment - TraesCS7D01G333200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G333200 chr7D 100.000 2474 0 0 1 2474 424492459 424489986 0.000000e+00 4569.0
1 TraesCS7D01G333200 chr7D 91.197 284 24 1 2063 2346 604577184 604577466 3.860000e-103 385.0
2 TraesCS7D01G333200 chr7B 90.843 1507 61 24 475 1928 442024852 442023370 0.000000e+00 1947.0
3 TraesCS7D01G333200 chr7A 89.544 1119 45 29 750 1819 508842440 508843535 0.000000e+00 1352.0
4 TraesCS7D01G333200 chr7A 93.396 106 6 1 476 580 508842252 508842357 3.290000e-34 156.0
5 TraesCS7D01G333200 chr7A 97.222 36 1 0 1779 1814 508843900 508843865 7.390000e-06 62.1
6 TraesCS7D01G333200 chr1D 87.766 376 32 7 1 366 336359848 336360219 6.320000e-116 427.0
7 TraesCS7D01G333200 chr1D 91.259 286 25 0 2061 2346 353644252 353644537 8.300000e-105 390.0
8 TraesCS7D01G333200 chr1D 90.941 287 25 1 2061 2346 223470055 223469769 3.860000e-103 385.0
9 TraesCS7D01G333200 chr6D 88.485 330 28 3 43 364 68688843 68688516 8.300000e-105 390.0
10 TraesCS7D01G333200 chr2D 90.909 286 26 0 2061 2346 483072143 483071858 3.860000e-103 385.0
11 TraesCS7D01G333200 chr2D 90.909 286 26 0 2061 2346 620214210 620213925 3.860000e-103 385.0
12 TraesCS7D01G333200 chr2D 94.017 117 5 2 2359 2474 620213783 620213668 2.530000e-40 176.0
13 TraesCS7D01G333200 chr4D 90.909 286 25 1 2061 2346 59636918 59636634 1.390000e-102 383.0
14 TraesCS7D01G333200 chr4D 84.225 374 37 13 1 364 489241609 489241248 6.550000e-91 344.0
15 TraesCS7D01G333200 chr4D 83.598 378 45 14 1 366 505165500 505165872 3.050000e-89 339.0
16 TraesCS7D01G333200 chr4D 98.291 117 1 1 2359 2474 59636481 59636365 1.160000e-48 204.0
17 TraesCS7D01G333200 chr4D 93.162 117 7 1 2359 2474 426547150 426547034 1.180000e-38 171.0
18 TraesCS7D01G333200 chr4D 92.174 115 8 1 2361 2474 222966562 222966676 7.080000e-36 161.0
19 TraesCS7D01G333200 chrUn 90.877 285 25 1 2062 2346 326013539 326013822 4.990000e-102 381.0
20 TraesCS7D01G333200 chrUn 90.877 285 25 1 2062 2346 467219520 467219237 4.990000e-102 381.0
21 TraesCS7D01G333200 chr5D 90.559 286 26 1 2061 2346 192549348 192549632 6.460000e-101 377.0
22 TraesCS7D01G333200 chr3B 85.635 362 41 9 13 366 822018860 822018502 1.080000e-98 370.0
23 TraesCS7D01G333200 chr3B 85.675 363 38 10 13 366 822034321 822033964 1.080000e-98 370.0
24 TraesCS7D01G333200 chr3B 85.399 363 40 11 13 366 822003888 822003530 5.030000e-97 364.0
25 TraesCS7D01G333200 chr3B 79.325 237 38 9 1106 1339 167057928 167057700 3.290000e-34 156.0
26 TraesCS7D01G333200 chr3B 80.374 214 32 8 1128 1339 166754368 166754163 1.180000e-33 154.0
27 TraesCS7D01G333200 chr1A 84.492 374 42 11 3 366 427033069 427033436 3.030000e-94 355.0
28 TraesCS7D01G333200 chr1B 84.282 369 42 9 10 366 456715168 456714804 1.820000e-91 346.0
29 TraesCS7D01G333200 chr1B 80.899 89 16 1 1921 2008 185920789 185920877 4.410000e-08 69.4
30 TraesCS7D01G333200 chr3D 96.552 116 3 1 2360 2474 85024817 85024702 9.030000e-45 191.0
31 TraesCS7D01G333200 chr3D 77.972 286 48 11 1132 1411 113819495 113819771 5.470000e-37 165.0
32 TraesCS7D01G333200 chr3D 78.049 287 46 12 1132 1411 114022567 114022843 5.470000e-37 165.0
33 TraesCS7D01G333200 chr3D 90.598 117 10 1 2359 2474 496587552 496587668 1.180000e-33 154.0
34 TraesCS7D01G333200 chr5B 95.536 112 4 1 2364 2474 196986969 196986858 7.030000e-41 178.0
35 TraesCS7D01G333200 chr5B 91.964 112 8 1 2364 2474 535390792 535390681 3.290000e-34 156.0
36 TraesCS7D01G333200 chr3A 76.923 312 58 11 1106 1411 109298245 109298548 5.470000e-37 165.0
37 TraesCS7D01G333200 chr3A 77.586 290 50 11 1128 1411 109342370 109342650 7.080000e-36 161.0
38 TraesCS7D01G333200 chr5A 91.453 117 9 1 2359 2474 673213656 673213540 2.550000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G333200 chr7D 424489986 424492459 2473 True 4569.0 4569 100.000 1 2474 1 chr7D.!!$R1 2473
1 TraesCS7D01G333200 chr7B 442023370 442024852 1482 True 1947.0 1947 90.843 475 1928 1 chr7B.!!$R1 1453
2 TraesCS7D01G333200 chr7A 508842252 508843535 1283 False 754.0 1352 91.470 476 1819 2 chr7A.!!$F1 1343
3 TraesCS7D01G333200 chr2D 620213668 620214210 542 True 280.5 385 92.463 2061 2474 2 chr2D.!!$R2 413
4 TraesCS7D01G333200 chr4D 59636365 59636918 553 True 293.5 383 94.600 2061 2474 2 chr4D.!!$R3 413

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
112 113 0.034896 ACGTGAGGTTCGCTCCAAAT 59.965 50.0 0.0 0.0 0.0 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1973 2103 0.034863 GGGGTCTATCCGTTTTGCCA 60.035 55.0 0.0 0.0 37.0 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.429141 TCGGTGTCGAGGCTCGTC 61.429 66.667 33.31 28.47 41.35 4.20
18 19 3.432588 CGGTGTCGAGGCTCGTCT 61.433 66.667 33.31 0.00 41.35 4.18
19 20 2.179517 GGTGTCGAGGCTCGTCTG 59.820 66.667 33.31 8.79 41.35 3.51
20 21 2.505118 GTGTCGAGGCTCGTCTGC 60.505 66.667 33.31 20.96 41.35 4.26
21 22 2.983592 TGTCGAGGCTCGTCTGCA 60.984 61.111 33.31 23.84 41.35 4.41
22 23 2.505118 GTCGAGGCTCGTCTGCAC 60.505 66.667 33.31 21.24 41.35 4.57
23 24 3.749064 TCGAGGCTCGTCTGCACC 61.749 66.667 33.31 0.00 41.35 5.01
24 25 4.803426 CGAGGCTCGTCTGCACCC 62.803 72.222 27.92 0.00 34.72 4.61
25 26 3.695606 GAGGCTCGTCTGCACCCA 61.696 66.667 0.00 0.00 34.04 4.51
26 27 3.005539 AGGCTCGTCTGCACCCAT 61.006 61.111 0.00 0.00 34.04 4.00
27 28 2.045926 GGCTCGTCTGCACCCATT 60.046 61.111 0.00 0.00 34.04 3.16
28 29 2.109126 GGCTCGTCTGCACCCATTC 61.109 63.158 0.00 0.00 34.04 2.67
29 30 1.375908 GCTCGTCTGCACCCATTCA 60.376 57.895 0.00 0.00 0.00 2.57
30 31 1.364626 GCTCGTCTGCACCCATTCAG 61.365 60.000 0.00 0.00 0.00 3.02
31 32 0.742281 CTCGTCTGCACCCATTCAGG 60.742 60.000 0.00 0.00 37.03 3.86
32 33 1.191489 TCGTCTGCACCCATTCAGGA 61.191 55.000 0.00 0.00 41.22 3.86
33 34 0.321564 CGTCTGCACCCATTCAGGAA 60.322 55.000 0.00 0.00 41.22 3.36
34 35 1.881925 CGTCTGCACCCATTCAGGAAA 60.882 52.381 0.00 0.00 41.22 3.13
35 36 2.238521 GTCTGCACCCATTCAGGAAAA 58.761 47.619 0.00 0.00 41.22 2.29
36 37 2.827921 GTCTGCACCCATTCAGGAAAAT 59.172 45.455 0.00 0.00 41.22 1.82
37 38 4.016444 GTCTGCACCCATTCAGGAAAATA 58.984 43.478 0.00 0.00 41.22 1.40
38 39 4.646492 GTCTGCACCCATTCAGGAAAATAT 59.354 41.667 0.00 0.00 41.22 1.28
39 40 4.889409 TCTGCACCCATTCAGGAAAATATC 59.111 41.667 0.00 0.00 41.22 1.63
101 102 7.972832 TTTTAGACAATTTATCACGTGAGGT 57.027 32.000 24.41 10.73 0.00 3.85
102 103 7.972832 TTTAGACAATTTATCACGTGAGGTT 57.027 32.000 24.41 9.95 0.00 3.50
103 104 7.591006 TTAGACAATTTATCACGTGAGGTTC 57.409 36.000 24.41 12.10 0.00 3.62
104 105 4.625742 AGACAATTTATCACGTGAGGTTCG 59.374 41.667 24.41 12.44 0.00 3.95
105 106 3.124636 ACAATTTATCACGTGAGGTTCGC 59.875 43.478 24.41 0.00 0.00 4.70
106 107 2.736144 TTTATCACGTGAGGTTCGCT 57.264 45.000 24.41 7.61 0.00 4.93
107 108 2.273370 TTATCACGTGAGGTTCGCTC 57.727 50.000 24.41 0.00 0.00 5.03
108 109 0.454600 TATCACGTGAGGTTCGCTCC 59.545 55.000 24.41 0.00 0.00 4.70
109 110 1.532604 ATCACGTGAGGTTCGCTCCA 61.533 55.000 24.41 0.00 0.00 3.86
110 111 1.300620 CACGTGAGGTTCGCTCCAA 60.301 57.895 10.90 0.00 0.00 3.53
111 112 0.878523 CACGTGAGGTTCGCTCCAAA 60.879 55.000 10.90 0.00 0.00 3.28
112 113 0.034896 ACGTGAGGTTCGCTCCAAAT 59.965 50.000 0.00 0.00 0.00 2.32
113 114 1.156736 CGTGAGGTTCGCTCCAAATT 58.843 50.000 0.00 0.00 0.00 1.82
114 115 1.535462 CGTGAGGTTCGCTCCAAATTT 59.465 47.619 0.00 0.00 0.00 1.82
115 116 2.665519 CGTGAGGTTCGCTCCAAATTTG 60.666 50.000 11.40 11.40 0.00 2.32
116 117 2.552315 GTGAGGTTCGCTCCAAATTTGA 59.448 45.455 19.86 5.10 0.00 2.69
117 118 2.813754 TGAGGTTCGCTCCAAATTTGAG 59.186 45.455 19.86 14.70 0.00 3.02
118 119 3.074412 GAGGTTCGCTCCAAATTTGAGA 58.926 45.455 19.86 13.23 0.00 3.27
119 120 3.690460 AGGTTCGCTCCAAATTTGAGAT 58.310 40.909 19.86 0.00 0.00 2.75
120 121 3.691609 AGGTTCGCTCCAAATTTGAGATC 59.308 43.478 19.86 9.47 0.00 2.75
121 122 3.440173 GGTTCGCTCCAAATTTGAGATCA 59.560 43.478 19.86 0.00 0.00 2.92
122 123 4.096984 GGTTCGCTCCAAATTTGAGATCAT 59.903 41.667 19.86 0.00 0.00 2.45
123 124 5.393461 GGTTCGCTCCAAATTTGAGATCATT 60.393 40.000 19.86 0.00 0.00 2.57
124 125 5.902613 TCGCTCCAAATTTGAGATCATTT 57.097 34.783 19.86 0.00 0.00 2.32
125 126 5.643664 TCGCTCCAAATTTGAGATCATTTG 58.356 37.500 19.86 8.54 39.25 2.32
133 134 8.462143 CAAATTTGAGATCATTTGGACTTCTG 57.538 34.615 13.08 0.00 36.93 3.02
134 135 8.301720 CAAATTTGAGATCATTTGGACTTCTGA 58.698 33.333 13.08 0.00 36.93 3.27
135 136 7.627298 ATTTGAGATCATTTGGACTTCTGAG 57.373 36.000 0.00 0.00 0.00 3.35
136 137 6.364568 TTGAGATCATTTGGACTTCTGAGA 57.635 37.500 0.00 0.00 0.00 3.27
137 138 6.364568 TGAGATCATTTGGACTTCTGAGAA 57.635 37.500 0.00 0.00 0.00 2.87
138 139 6.404708 TGAGATCATTTGGACTTCTGAGAAG 58.595 40.000 20.00 20.00 0.00 2.85
139 140 5.184711 AGATCATTTGGACTTCTGAGAAGC 58.815 41.667 21.38 13.78 0.00 3.86
140 141 4.630644 TCATTTGGACTTCTGAGAAGCT 57.369 40.909 21.38 9.27 0.00 3.74
141 142 4.573900 TCATTTGGACTTCTGAGAAGCTC 58.426 43.478 21.38 16.49 0.00 4.09
142 143 4.285517 TCATTTGGACTTCTGAGAAGCTCT 59.714 41.667 21.38 2.70 0.00 4.09
143 144 3.951775 TTGGACTTCTGAGAAGCTCTC 57.048 47.619 21.38 11.74 43.65 3.20
171 172 4.993029 AAAGACAAATCGGGTGAAAACA 57.007 36.364 0.00 0.00 0.00 2.83
172 173 4.568152 AAGACAAATCGGGTGAAAACAG 57.432 40.909 0.00 0.00 0.00 3.16
173 174 3.551846 AGACAAATCGGGTGAAAACAGT 58.448 40.909 0.00 0.00 0.00 3.55
174 175 3.315191 AGACAAATCGGGTGAAAACAGTG 59.685 43.478 0.00 0.00 0.00 3.66
175 176 2.223711 ACAAATCGGGTGAAAACAGTGC 60.224 45.455 0.00 0.00 0.00 4.40
176 177 1.686355 AATCGGGTGAAAACAGTGCA 58.314 45.000 0.00 0.00 0.00 4.57
177 178 1.909700 ATCGGGTGAAAACAGTGCAT 58.090 45.000 0.00 0.00 0.00 3.96
178 179 0.950836 TCGGGTGAAAACAGTGCATG 59.049 50.000 0.00 0.00 0.00 4.06
179 180 0.950836 CGGGTGAAAACAGTGCATGA 59.049 50.000 0.00 0.00 0.00 3.07
180 181 1.336440 CGGGTGAAAACAGTGCATGAA 59.664 47.619 0.00 0.00 0.00 2.57
181 182 2.742774 GGGTGAAAACAGTGCATGAAC 58.257 47.619 0.00 0.00 0.00 3.18
182 183 2.100584 GGGTGAAAACAGTGCATGAACA 59.899 45.455 6.60 0.00 0.00 3.18
183 184 3.374745 GGTGAAAACAGTGCATGAACAG 58.625 45.455 6.60 0.00 0.00 3.16
184 185 3.181487 GGTGAAAACAGTGCATGAACAGT 60.181 43.478 6.60 0.25 0.00 3.55
185 186 4.036262 GGTGAAAACAGTGCATGAACAGTA 59.964 41.667 6.60 0.00 0.00 2.74
186 187 5.449862 GGTGAAAACAGTGCATGAACAGTAA 60.450 40.000 6.60 0.00 0.00 2.24
187 188 6.033341 GTGAAAACAGTGCATGAACAGTAAA 58.967 36.000 6.60 0.00 0.00 2.01
188 189 6.020678 GTGAAAACAGTGCATGAACAGTAAAC 60.021 38.462 6.60 0.28 0.00 2.01
189 190 5.574891 AAACAGTGCATGAACAGTAAACA 57.425 34.783 6.60 0.00 0.00 2.83
190 191 5.772825 AACAGTGCATGAACAGTAAACAT 57.227 34.783 6.60 0.00 0.00 2.71
191 192 5.772825 ACAGTGCATGAACAGTAAACATT 57.227 34.783 6.60 0.00 0.00 2.71
192 193 6.147864 ACAGTGCATGAACAGTAAACATTT 57.852 33.333 6.60 0.00 0.00 2.32
193 194 6.572519 ACAGTGCATGAACAGTAAACATTTT 58.427 32.000 6.60 0.00 0.00 1.82
194 195 7.041107 ACAGTGCATGAACAGTAAACATTTTT 58.959 30.769 6.60 0.00 0.00 1.94
195 196 8.194104 ACAGTGCATGAACAGTAAACATTTTTA 58.806 29.630 6.60 0.00 0.00 1.52
196 197 8.479280 CAGTGCATGAACAGTAAACATTTTTAC 58.521 33.333 6.60 6.41 45.22 2.01
197 198 8.194104 AGTGCATGAACAGTAAACATTTTTACA 58.806 29.630 15.08 0.00 46.66 2.41
198 199 8.479280 GTGCATGAACAGTAAACATTTTTACAG 58.521 33.333 15.08 10.35 46.66 2.74
199 200 8.409371 TGCATGAACAGTAAACATTTTTACAGA 58.591 29.630 15.08 0.00 46.66 3.41
200 201 8.690840 GCATGAACAGTAAACATTTTTACAGAC 58.309 33.333 15.08 8.61 46.66 3.51
201 202 9.180678 CATGAACAGTAAACATTTTTACAGACC 57.819 33.333 15.08 6.74 46.66 3.85
202 203 7.708998 TGAACAGTAAACATTTTTACAGACCC 58.291 34.615 15.08 4.91 46.66 4.46
203 204 7.558444 TGAACAGTAAACATTTTTACAGACCCT 59.442 33.333 15.08 0.00 46.66 4.34
204 205 7.272037 ACAGTAAACATTTTTACAGACCCTG 57.728 36.000 15.08 7.23 46.66 4.45
205 206 7.057894 ACAGTAAACATTTTTACAGACCCTGA 58.942 34.615 15.08 0.00 46.66 3.86
206 207 7.558444 ACAGTAAACATTTTTACAGACCCTGAA 59.442 33.333 15.08 0.00 46.66 3.02
207 208 8.576442 CAGTAAACATTTTTACAGACCCTGAAT 58.424 33.333 15.08 0.00 46.66 2.57
208 209 9.143155 AGTAAACATTTTTACAGACCCTGAATT 57.857 29.630 15.08 0.00 46.66 2.17
209 210 9.758651 GTAAACATTTTTACAGACCCTGAATTT 57.241 29.630 9.18 0.00 44.54 1.82
210 211 8.661352 AAACATTTTTACAGACCCTGAATTTG 57.339 30.769 0.45 0.00 35.18 2.32
211 212 7.360113 ACATTTTTACAGACCCTGAATTTGT 57.640 32.000 0.45 0.00 35.18 2.83
212 213 7.433680 ACATTTTTACAGACCCTGAATTTGTC 58.566 34.615 0.45 0.00 35.18 3.18
213 214 6.399639 TTTTTACAGACCCTGAATTTGTCC 57.600 37.500 0.45 0.00 35.18 4.02
214 215 4.993705 TTACAGACCCTGAATTTGTCCT 57.006 40.909 0.45 0.00 35.18 3.85
215 216 3.884037 ACAGACCCTGAATTTGTCCTT 57.116 42.857 0.45 0.00 35.18 3.36
216 217 4.184649 ACAGACCCTGAATTTGTCCTTT 57.815 40.909 0.45 0.00 35.18 3.11
217 218 4.546674 ACAGACCCTGAATTTGTCCTTTT 58.453 39.130 0.45 0.00 35.18 2.27
218 219 4.962362 ACAGACCCTGAATTTGTCCTTTTT 59.038 37.500 0.45 0.00 35.18 1.94
219 220 6.133356 ACAGACCCTGAATTTGTCCTTTTTA 58.867 36.000 0.45 0.00 35.18 1.52
220 221 6.040504 ACAGACCCTGAATTTGTCCTTTTTAC 59.959 38.462 0.45 0.00 35.18 2.01
221 222 5.538813 AGACCCTGAATTTGTCCTTTTTACC 59.461 40.000 0.00 0.00 0.00 2.85
222 223 4.279922 ACCCTGAATTTGTCCTTTTTACCG 59.720 41.667 0.00 0.00 0.00 4.02
223 224 4.521256 CCCTGAATTTGTCCTTTTTACCGA 59.479 41.667 0.00 0.00 0.00 4.69
224 225 5.335661 CCCTGAATTTGTCCTTTTTACCGAG 60.336 44.000 0.00 0.00 0.00 4.63
225 226 5.472137 CCTGAATTTGTCCTTTTTACCGAGA 59.528 40.000 0.00 0.00 0.00 4.04
226 227 6.348540 CCTGAATTTGTCCTTTTTACCGAGAG 60.349 42.308 0.00 0.00 0.00 3.20
227 228 6.292923 TGAATTTGTCCTTTTTACCGAGAGA 58.707 36.000 0.00 0.00 0.00 3.10
228 229 6.940298 TGAATTTGTCCTTTTTACCGAGAGAT 59.060 34.615 0.00 0.00 0.00 2.75
229 230 6.743575 ATTTGTCCTTTTTACCGAGAGATG 57.256 37.500 0.00 0.00 0.00 2.90
230 231 3.596214 TGTCCTTTTTACCGAGAGATGC 58.404 45.455 0.00 0.00 0.00 3.91
231 232 3.260884 TGTCCTTTTTACCGAGAGATGCT 59.739 43.478 0.00 0.00 0.00 3.79
232 233 3.866327 GTCCTTTTTACCGAGAGATGCTC 59.134 47.826 0.00 0.00 40.38 4.26
233 234 3.513912 TCCTTTTTACCGAGAGATGCTCA 59.486 43.478 0.00 0.00 44.15 4.26
234 235 4.162320 TCCTTTTTACCGAGAGATGCTCAT 59.838 41.667 0.00 0.00 44.15 2.90
235 236 5.362717 TCCTTTTTACCGAGAGATGCTCATA 59.637 40.000 0.00 0.00 44.15 2.15
236 237 6.042093 TCCTTTTTACCGAGAGATGCTCATAT 59.958 38.462 0.00 0.00 44.15 1.78
237 238 6.146837 CCTTTTTACCGAGAGATGCTCATATG 59.853 42.308 0.00 0.00 44.15 1.78
238 239 5.791336 TTTACCGAGAGATGCTCATATGT 57.209 39.130 1.90 0.00 44.15 2.29
239 240 3.932545 ACCGAGAGATGCTCATATGTC 57.067 47.619 1.90 0.00 44.15 3.06
240 241 2.560542 ACCGAGAGATGCTCATATGTCC 59.439 50.000 1.90 0.00 44.15 4.02
241 242 2.560105 CCGAGAGATGCTCATATGTCCA 59.440 50.000 1.90 1.74 44.15 4.02
242 243 3.006217 CCGAGAGATGCTCATATGTCCAA 59.994 47.826 1.90 0.00 44.15 3.53
243 244 4.502087 CCGAGAGATGCTCATATGTCCAAA 60.502 45.833 1.90 0.00 44.15 3.28
244 245 5.236282 CGAGAGATGCTCATATGTCCAAAT 58.764 41.667 1.90 0.00 44.15 2.32
245 246 5.120363 CGAGAGATGCTCATATGTCCAAATG 59.880 44.000 1.90 0.00 44.15 2.32
246 247 6.183810 AGAGATGCTCATATGTCCAAATGA 57.816 37.500 1.90 0.00 32.06 2.57
247 248 6.780901 AGAGATGCTCATATGTCCAAATGAT 58.219 36.000 1.90 0.00 31.95 2.45
248 249 7.232188 AGAGATGCTCATATGTCCAAATGATT 58.768 34.615 1.90 0.00 31.95 2.57
249 250 7.724506 AGAGATGCTCATATGTCCAAATGATTT 59.275 33.333 1.90 0.00 31.95 2.17
250 251 8.929260 AGATGCTCATATGTCCAAATGATTTA 57.071 30.769 1.90 0.00 31.95 1.40
251 252 9.358406 AGATGCTCATATGTCCAAATGATTTAA 57.642 29.630 1.90 0.00 31.95 1.52
252 253 9.970395 GATGCTCATATGTCCAAATGATTTAAA 57.030 29.630 1.90 0.00 31.95 1.52
262 263 8.494347 TGTCCAAATGATTTAAAAATTGAAGCG 58.506 29.630 0.00 0.00 0.00 4.68
263 264 8.495148 GTCCAAATGATTTAAAAATTGAAGCGT 58.505 29.630 0.00 0.00 0.00 5.07
264 265 9.698309 TCCAAATGATTTAAAAATTGAAGCGTA 57.302 25.926 0.00 0.00 0.00 4.42
265 266 9.739786 CCAAATGATTTAAAAATTGAAGCGTAC 57.260 29.630 0.00 0.00 0.00 3.67
266 267 9.739786 CAAATGATTTAAAAATTGAAGCGTACC 57.260 29.630 0.00 0.00 0.00 3.34
267 268 9.705290 AAATGATTTAAAAATTGAAGCGTACCT 57.295 25.926 0.00 0.00 0.00 3.08
268 269 8.911247 ATGATTTAAAAATTGAAGCGTACCTC 57.089 30.769 0.00 0.00 0.00 3.85
269 270 7.877003 TGATTTAAAAATTGAAGCGTACCTCA 58.123 30.769 0.00 0.00 0.00 3.86
270 271 7.806014 TGATTTAAAAATTGAAGCGTACCTCAC 59.194 33.333 0.00 0.00 0.00 3.51
283 284 5.006649 CGTACCTCACGCATCAAATTATC 57.993 43.478 0.00 0.00 45.03 1.75
284 285 4.745125 CGTACCTCACGCATCAAATTATCT 59.255 41.667 0.00 0.00 45.03 1.98
285 286 5.918576 CGTACCTCACGCATCAAATTATCTA 59.081 40.000 0.00 0.00 45.03 1.98
286 287 6.129168 CGTACCTCACGCATCAAATTATCTAC 60.129 42.308 0.00 0.00 45.03 2.59
287 288 5.918608 ACCTCACGCATCAAATTATCTACT 58.081 37.500 0.00 0.00 0.00 2.57
288 289 7.050970 ACCTCACGCATCAAATTATCTACTA 57.949 36.000 0.00 0.00 0.00 1.82
289 290 6.924060 ACCTCACGCATCAAATTATCTACTAC 59.076 38.462 0.00 0.00 0.00 2.73
290 291 6.923508 CCTCACGCATCAAATTATCTACTACA 59.076 38.462 0.00 0.00 0.00 2.74
291 292 7.096023 CCTCACGCATCAAATTATCTACTACAC 60.096 40.741 0.00 0.00 0.00 2.90
292 293 7.262048 TCACGCATCAAATTATCTACTACACA 58.738 34.615 0.00 0.00 0.00 3.72
293 294 7.222031 TCACGCATCAAATTATCTACTACACAC 59.778 37.037 0.00 0.00 0.00 3.82
294 295 7.010091 CACGCATCAAATTATCTACTACACACA 59.990 37.037 0.00 0.00 0.00 3.72
295 296 7.547722 ACGCATCAAATTATCTACTACACACAA 59.452 33.333 0.00 0.00 0.00 3.33
296 297 8.387354 CGCATCAAATTATCTACTACACACAAA 58.613 33.333 0.00 0.00 0.00 2.83
359 360 0.892063 TTTTTCATAAGGGCGGGTGC 59.108 50.000 0.00 0.00 41.71 5.01
360 361 0.251386 TTTTCATAAGGGCGGGTGCA 60.251 50.000 0.00 0.00 45.35 4.57
361 362 0.679640 TTTCATAAGGGCGGGTGCAG 60.680 55.000 0.00 0.00 45.35 4.41
362 363 3.211963 CATAAGGGCGGGTGCAGC 61.212 66.667 7.55 7.55 45.35 5.25
363 364 3.411517 ATAAGGGCGGGTGCAGCT 61.412 61.111 16.65 0.00 45.35 4.24
364 365 3.704231 ATAAGGGCGGGTGCAGCTG 62.704 63.158 20.46 20.46 45.35 4.24
370 371 4.988598 CGGGTGCAGCTGACCGTT 62.989 66.667 26.75 0.00 41.34 4.44
371 372 2.345991 GGGTGCAGCTGACCGTTA 59.654 61.111 20.43 0.00 33.89 3.18
372 373 2.033194 GGGTGCAGCTGACCGTTAC 61.033 63.158 20.43 5.83 33.89 2.50
373 374 1.004918 GGTGCAGCTGACCGTTACT 60.005 57.895 20.43 0.00 0.00 2.24
374 375 1.291877 GGTGCAGCTGACCGTTACTG 61.292 60.000 20.43 0.00 0.00 2.74
376 377 3.876300 CAGCTGACCGTTACTGCC 58.124 61.111 8.42 0.00 33.78 4.85
377 378 1.293498 CAGCTGACCGTTACTGCCT 59.707 57.895 8.42 0.00 33.78 4.75
378 379 0.320771 CAGCTGACCGTTACTGCCTT 60.321 55.000 8.42 0.00 33.78 4.35
379 380 1.067142 CAGCTGACCGTTACTGCCTTA 60.067 52.381 8.42 0.00 33.78 2.69
380 381 1.831736 AGCTGACCGTTACTGCCTTAT 59.168 47.619 0.00 0.00 33.78 1.73
381 382 2.159085 AGCTGACCGTTACTGCCTTATC 60.159 50.000 0.00 0.00 33.78 1.75
382 383 2.822764 CTGACCGTTACTGCCTTATCC 58.177 52.381 0.00 0.00 0.00 2.59
383 384 1.135527 TGACCGTTACTGCCTTATCCG 59.864 52.381 0.00 0.00 0.00 4.18
384 385 1.135721 GACCGTTACTGCCTTATCCGT 59.864 52.381 0.00 0.00 0.00 4.69
385 386 1.134907 ACCGTTACTGCCTTATCCGTG 60.135 52.381 0.00 0.00 0.00 4.94
386 387 1.134907 CCGTTACTGCCTTATCCGTGT 60.135 52.381 0.00 0.00 0.00 4.49
387 388 1.924524 CGTTACTGCCTTATCCGTGTG 59.075 52.381 0.00 0.00 0.00 3.82
388 389 2.673043 CGTTACTGCCTTATCCGTGTGT 60.673 50.000 0.00 0.00 0.00 3.72
389 390 3.427909 CGTTACTGCCTTATCCGTGTGTA 60.428 47.826 0.00 0.00 0.00 2.90
390 391 2.667473 ACTGCCTTATCCGTGTGTAC 57.333 50.000 0.00 0.00 0.00 2.90
391 392 2.176889 ACTGCCTTATCCGTGTGTACT 58.823 47.619 0.00 0.00 0.00 2.73
392 393 3.359033 ACTGCCTTATCCGTGTGTACTA 58.641 45.455 0.00 0.00 0.00 1.82
393 394 3.129988 ACTGCCTTATCCGTGTGTACTAC 59.870 47.826 0.00 0.00 0.00 2.73
394 395 3.090790 TGCCTTATCCGTGTGTACTACA 58.909 45.455 0.00 0.00 36.82 2.74
395 396 3.510753 TGCCTTATCCGTGTGTACTACAA 59.489 43.478 0.00 0.00 41.89 2.41
396 397 4.110482 GCCTTATCCGTGTGTACTACAAG 58.890 47.826 0.00 0.00 41.89 3.16
397 398 4.110482 CCTTATCCGTGTGTACTACAAGC 58.890 47.826 0.00 0.00 41.89 4.01
398 399 4.381185 CCTTATCCGTGTGTACTACAAGCA 60.381 45.833 0.00 0.00 41.89 3.91
399 400 2.717580 TCCGTGTGTACTACAAGCAG 57.282 50.000 0.00 0.00 41.89 4.24
400 401 1.958579 TCCGTGTGTACTACAAGCAGT 59.041 47.619 0.00 0.00 41.89 4.40
401 402 2.363038 TCCGTGTGTACTACAAGCAGTT 59.637 45.455 0.00 0.00 41.89 3.16
402 403 3.569277 TCCGTGTGTACTACAAGCAGTTA 59.431 43.478 0.00 0.00 41.89 2.24
403 404 4.219070 TCCGTGTGTACTACAAGCAGTTAT 59.781 41.667 0.00 0.00 41.89 1.89
404 405 4.561606 CCGTGTGTACTACAAGCAGTTATC 59.438 45.833 0.00 0.00 41.89 1.75
405 406 4.262277 CGTGTGTACTACAAGCAGTTATCG 59.738 45.833 0.00 0.00 41.89 2.92
406 407 5.159209 GTGTGTACTACAAGCAGTTATCGT 58.841 41.667 0.00 0.00 41.89 3.73
407 408 5.060569 GTGTGTACTACAAGCAGTTATCGTG 59.939 44.000 0.00 0.00 41.89 4.35
408 409 5.159209 GTGTACTACAAGCAGTTATCGTGT 58.841 41.667 0.00 0.00 0.00 4.49
409 410 5.285607 GTGTACTACAAGCAGTTATCGTGTC 59.714 44.000 0.00 0.00 0.00 3.67
410 411 3.499048 ACTACAAGCAGTTATCGTGTCG 58.501 45.455 0.00 0.00 0.00 4.35
411 412 1.068474 ACAAGCAGTTATCGTGTCGC 58.932 50.000 0.00 0.00 0.00 5.19
412 413 1.067693 CAAGCAGTTATCGTGTCGCA 58.932 50.000 0.00 0.00 0.00 5.10
413 414 1.068474 AAGCAGTTATCGTGTCGCAC 58.932 50.000 0.58 0.58 0.00 5.34
414 415 0.736325 AGCAGTTATCGTGTCGCACC 60.736 55.000 4.73 0.00 0.00 5.01
415 416 1.693083 GCAGTTATCGTGTCGCACCC 61.693 60.000 4.73 0.00 0.00 4.61
416 417 1.153901 AGTTATCGTGTCGCACCCG 60.154 57.895 4.73 0.00 0.00 5.28
417 418 2.507547 TTATCGTGTCGCACCCGC 60.508 61.111 4.73 0.00 0.00 6.13
418 419 3.284133 TTATCGTGTCGCACCCGCA 62.284 57.895 4.73 0.00 38.40 5.69
419 420 2.766875 TTATCGTGTCGCACCCGCAA 62.767 55.000 4.73 0.00 38.40 4.85
428 429 3.403057 CACCCGCAACGACGTCTG 61.403 66.667 14.70 7.23 0.00 3.51
429 430 3.908081 ACCCGCAACGACGTCTGT 61.908 61.111 14.70 10.46 0.00 3.41
430 431 3.403057 CCCGCAACGACGTCTGTG 61.403 66.667 14.70 12.30 0.00 3.66
431 432 4.059459 CCGCAACGACGTCTGTGC 62.059 66.667 23.18 23.18 0.00 4.57
432 433 3.030308 CGCAACGACGTCTGTGCT 61.030 61.111 27.30 8.27 0.00 4.40
433 434 2.546321 GCAACGACGTCTGTGCTG 59.454 61.111 24.82 15.96 0.00 4.41
434 435 1.949133 GCAACGACGTCTGTGCTGA 60.949 57.895 24.82 0.00 0.00 4.26
435 436 1.487452 GCAACGACGTCTGTGCTGAA 61.487 55.000 24.82 0.00 0.00 3.02
436 437 1.139989 CAACGACGTCTGTGCTGAAT 58.860 50.000 14.70 0.00 0.00 2.57
437 438 1.125021 CAACGACGTCTGTGCTGAATC 59.875 52.381 14.70 0.00 0.00 2.52
438 439 0.388649 ACGACGTCTGTGCTGAATCC 60.389 55.000 14.70 0.00 0.00 3.01
439 440 0.109086 CGACGTCTGTGCTGAATCCT 60.109 55.000 14.70 0.00 0.00 3.24
440 441 1.670087 CGACGTCTGTGCTGAATCCTT 60.670 52.381 14.70 0.00 0.00 3.36
441 442 2.417719 GACGTCTGTGCTGAATCCTTT 58.582 47.619 8.70 0.00 0.00 3.11
442 443 2.146342 ACGTCTGTGCTGAATCCTTTG 58.854 47.619 0.00 0.00 0.00 2.77
443 444 1.466167 CGTCTGTGCTGAATCCTTTGG 59.534 52.381 0.00 0.00 0.00 3.28
444 445 2.783135 GTCTGTGCTGAATCCTTTGGA 58.217 47.619 0.00 0.00 35.55 3.53
445 446 3.149196 GTCTGTGCTGAATCCTTTGGAA 58.851 45.455 0.00 0.00 34.34 3.53
446 447 3.569701 GTCTGTGCTGAATCCTTTGGAAA 59.430 43.478 0.00 0.00 34.34 3.13
447 448 4.037923 GTCTGTGCTGAATCCTTTGGAAAA 59.962 41.667 0.00 0.00 34.34 2.29
448 449 4.648762 TCTGTGCTGAATCCTTTGGAAAAA 59.351 37.500 0.00 0.00 34.34 1.94
449 450 4.947645 TGTGCTGAATCCTTTGGAAAAAG 58.052 39.130 0.00 0.00 34.34 2.27
450 451 4.648762 TGTGCTGAATCCTTTGGAAAAAGA 59.351 37.500 0.00 0.00 34.34 2.52
451 452 5.221303 TGTGCTGAATCCTTTGGAAAAAGAG 60.221 40.000 0.00 0.00 34.34 2.85
452 453 5.010012 GTGCTGAATCCTTTGGAAAAAGAGA 59.990 40.000 0.00 0.00 34.34 3.10
453 454 5.242393 TGCTGAATCCTTTGGAAAAAGAGAG 59.758 40.000 0.00 0.00 34.34 3.20
454 455 5.336293 GCTGAATCCTTTGGAAAAAGAGAGG 60.336 44.000 0.00 0.00 34.34 3.69
455 456 4.524328 TGAATCCTTTGGAAAAAGAGAGGC 59.476 41.667 0.00 0.00 34.34 4.70
456 457 3.593442 TCCTTTGGAAAAAGAGAGGCA 57.407 42.857 0.00 0.00 31.58 4.75
457 458 3.222603 TCCTTTGGAAAAAGAGAGGCAC 58.777 45.455 0.00 0.00 31.58 5.01
458 459 3.117512 TCCTTTGGAAAAAGAGAGGCACT 60.118 43.478 0.00 0.00 34.27 4.40
459 460 3.638627 CCTTTGGAAAAAGAGAGGCACTT 59.361 43.478 0.00 0.00 32.28 3.16
460 461 4.100035 CCTTTGGAAAAAGAGAGGCACTTT 59.900 41.667 0.00 0.00 38.91 2.66
461 462 4.918810 TTGGAAAAAGAGAGGCACTTTC 57.081 40.909 0.00 0.00 41.55 2.62
462 463 3.222603 TGGAAAAAGAGAGGCACTTTCC 58.777 45.455 6.27 6.27 40.86 3.13
463 464 3.117512 TGGAAAAAGAGAGGCACTTTCCT 60.118 43.478 12.36 0.00 40.86 3.36
464 465 3.891977 GGAAAAAGAGAGGCACTTTCCTT 59.108 43.478 6.04 0.00 40.86 3.36
465 466 4.342378 GGAAAAAGAGAGGCACTTTCCTTT 59.658 41.667 6.04 0.06 40.86 3.11
466 467 5.163405 GGAAAAAGAGAGGCACTTTCCTTTT 60.163 40.000 6.04 5.36 43.06 2.27
467 468 4.926140 AAAGAGAGGCACTTTCCTTTTG 57.074 40.909 0.00 0.00 40.86 2.44
468 469 3.864789 AGAGAGGCACTTTCCTTTTGA 57.135 42.857 0.00 0.00 40.86 2.69
469 470 3.481453 AGAGAGGCACTTTCCTTTTGAC 58.519 45.455 0.00 0.00 40.86 3.18
470 471 2.222027 AGAGGCACTTTCCTTTTGACG 58.778 47.619 0.00 0.00 41.55 4.35
471 472 1.266989 GAGGCACTTTCCTTTTGACGG 59.733 52.381 0.00 0.00 41.55 4.79
472 473 0.318699 GGCACTTTCCTTTTGACGGC 60.319 55.000 0.00 0.00 0.00 5.68
473 474 0.383949 GCACTTTCCTTTTGACGGCA 59.616 50.000 0.00 0.00 0.00 5.69
474 475 1.202359 GCACTTTCCTTTTGACGGCAA 60.202 47.619 0.00 0.00 0.00 4.52
475 476 2.737039 GCACTTTCCTTTTGACGGCAAA 60.737 45.455 13.68 13.68 41.97 3.68
592 635 8.331742 AGTGCAAAACATTAAATAAAACCAACG 58.668 29.630 0.00 0.00 0.00 4.10
596 639 8.604890 CAAAACATTAAATAAAACCAACGGTGT 58.395 29.630 0.00 0.00 35.34 4.16
599 642 7.142680 ACATTAAATAAAACCAACGGTGTGAG 58.857 34.615 0.00 0.00 35.34 3.51
623 666 2.361230 CTTTCCCGGCCTCAACCC 60.361 66.667 0.00 0.00 0.00 4.11
681 724 3.486542 GCGCTTCTGTGATTTCCATCTTC 60.487 47.826 0.00 0.00 0.00 2.87
682 725 3.064545 CGCTTCTGTGATTTCCATCTTCC 59.935 47.826 0.00 0.00 0.00 3.46
683 726 4.012374 GCTTCTGTGATTTCCATCTTCCA 58.988 43.478 0.00 0.00 0.00 3.53
684 727 4.643784 GCTTCTGTGATTTCCATCTTCCAT 59.356 41.667 0.00 0.00 0.00 3.41
686 729 5.705397 TCTGTGATTTCCATCTTCCATCT 57.295 39.130 0.00 0.00 0.00 2.90
687 730 6.070951 TCTGTGATTTCCATCTTCCATCTT 57.929 37.500 0.00 0.00 0.00 2.40
689 732 7.632861 TCTGTGATTTCCATCTTCCATCTTAA 58.367 34.615 0.00 0.00 0.00 1.85
690 733 8.277197 TCTGTGATTTCCATCTTCCATCTTAAT 58.723 33.333 0.00 0.00 0.00 1.40
691 734 9.565090 CTGTGATTTCCATCTTCCATCTTAATA 57.435 33.333 0.00 0.00 0.00 0.98
709 752 8.121305 TCTTAATACTACCCGAAAACTGTACA 57.879 34.615 0.00 0.00 0.00 2.90
712 755 3.986277 ACTACCCGAAAACTGTACACTG 58.014 45.455 0.00 0.00 0.00 3.66
723 766 3.603532 ACTGTACACTGCATTGAGATGG 58.396 45.455 11.48 0.10 33.72 3.51
729 772 2.292569 CACTGCATTGAGATGGCATACC 59.707 50.000 0.00 0.00 33.72 2.73
781 824 3.294079 CGTCCAACGTACCCTTTGT 57.706 52.632 0.00 0.00 36.74 2.83
972 1029 3.269178 CAGCAAGGAAAGCAAAACCAAA 58.731 40.909 0.00 0.00 0.00 3.28
1207 1281 2.829384 GGCCTCACCCACACCTTCA 61.829 63.158 0.00 0.00 0.00 3.02
1374 1448 2.683933 ATCGTCTTCCGCACCCCT 60.684 61.111 0.00 0.00 36.19 4.79
1483 1557 1.815212 CGCCAACTGATCGATCTGCG 61.815 60.000 26.60 23.99 42.69 5.18
1487 1561 2.656328 CTGATCGATCTGCGCGCA 60.656 61.111 34.12 34.12 40.61 6.09
1498 1572 2.104770 CTGCGCGCAAGTCAAGTCAA 62.105 55.000 35.50 7.26 41.68 3.18
1507 1581 2.869801 CAAGTCAAGTCAACGGTAAGCA 59.130 45.455 0.00 0.00 0.00 3.91
1511 1585 3.311596 GTCAAGTCAACGGTAAGCAGTTT 59.688 43.478 0.00 0.00 30.85 2.66
1512 1586 4.508861 GTCAAGTCAACGGTAAGCAGTTTA 59.491 41.667 0.00 0.00 30.85 2.01
1557 1635 4.560743 TGTCGCTGTGCCTGCCAA 62.561 61.111 0.00 0.00 0.00 4.52
1558 1636 4.030452 GTCGCTGTGCCTGCCAAC 62.030 66.667 0.00 0.00 0.00 3.77
1559 1637 4.254709 TCGCTGTGCCTGCCAACT 62.255 61.111 0.00 0.00 0.00 3.16
1562 1640 2.492773 GCTGTGCCTGCCAACTTGT 61.493 57.895 0.00 0.00 0.00 3.16
1569 1647 0.179020 CCTGCCAACTTGTCAGTCCA 60.179 55.000 0.00 0.00 30.45 4.02
1578 1656 1.815003 CTTGTCAGTCCATGGCTTTCC 59.185 52.381 6.96 0.00 33.40 3.13
1622 1702 2.597217 CGGTGTGGTGCCAATGGT 60.597 61.111 0.00 0.00 0.00 3.55
1724 1854 7.742089 CGCTTTTGAAACTAGATCTGTTAACTG 59.258 37.037 5.18 6.66 0.00 3.16
1725 1855 7.535599 GCTTTTGAAACTAGATCTGTTAACTGC 59.464 37.037 5.18 5.56 0.00 4.40
1726 1856 6.706055 TTGAAACTAGATCTGTTAACTGCG 57.294 37.500 5.18 0.00 0.00 5.18
1762 1892 5.065218 GCGACCTGTAATGTCATCATCTTTT 59.935 40.000 0.00 0.00 30.21 2.27
1830 1960 4.810790 AGTTTGATCTAACGAGTGGAGTG 58.189 43.478 13.23 0.00 33.26 3.51
1882 2012 8.896744 TCGAGATCGAACTTAGAGGTAAATTAA 58.103 33.333 1.76 0.00 46.30 1.40
1928 2058 4.770874 CGGTGGCCGGTGGTTAGG 62.771 72.222 1.90 0.00 44.15 2.69
1939 2069 1.378762 TGGTTAGGCCAACTCCAGC 59.621 57.895 5.01 0.00 45.94 4.85
1940 2070 1.745489 GGTTAGGCCAACTCCAGCG 60.745 63.158 5.01 0.00 37.30 5.18
1941 2071 2.046314 TTAGGCCAACTCCAGCGC 60.046 61.111 5.01 0.00 0.00 5.92
1942 2072 3.950794 TTAGGCCAACTCCAGCGCG 62.951 63.158 5.01 0.00 0.00 6.86
1970 2100 4.712425 CGTCCGGCCTCGTTCGTT 62.712 66.667 0.00 0.00 33.95 3.85
1971 2101 2.356673 GTCCGGCCTCGTTCGTTT 60.357 61.111 0.00 0.00 33.95 3.60
1972 2102 2.356553 TCCGGCCTCGTTCGTTTG 60.357 61.111 0.00 0.00 33.95 2.93
1973 2103 2.663852 CCGGCCTCGTTCGTTTGT 60.664 61.111 0.00 0.00 33.95 2.83
1974 2104 2.549282 CGGCCTCGTTCGTTTGTG 59.451 61.111 0.00 0.00 0.00 3.33
1975 2105 2.943653 GGCCTCGTTCGTTTGTGG 59.056 61.111 0.00 0.00 0.00 4.17
1976 2106 2.251371 GCCTCGTTCGTTTGTGGC 59.749 61.111 0.00 0.00 37.56 5.01
1977 2107 2.539338 GCCTCGTTCGTTTGTGGCA 61.539 57.895 10.24 0.00 42.72 4.92
1978 2108 2.018544 CCTCGTTCGTTTGTGGCAA 58.981 52.632 0.00 0.00 0.00 4.52
1979 2109 0.378962 CCTCGTTCGTTTGTGGCAAA 59.621 50.000 0.00 0.00 0.00 3.68
1980 2110 1.202200 CCTCGTTCGTTTGTGGCAAAA 60.202 47.619 0.00 0.00 0.00 2.44
1981 2111 1.843753 CTCGTTCGTTTGTGGCAAAAC 59.156 47.619 12.35 12.35 36.81 2.43
1988 2118 3.907894 GTTTGTGGCAAAACGGATAGA 57.092 42.857 0.00 0.00 30.90 1.98
1989 2119 3.561503 GTTTGTGGCAAAACGGATAGAC 58.438 45.455 0.00 0.00 30.90 2.59
1990 2120 1.816074 TGTGGCAAAACGGATAGACC 58.184 50.000 0.00 0.00 0.00 3.85
1991 2121 1.092348 GTGGCAAAACGGATAGACCC 58.908 55.000 0.00 0.00 34.64 4.46
1992 2122 0.034863 TGGCAAAACGGATAGACCCC 60.035 55.000 0.00 0.00 34.64 4.95
1993 2123 0.034863 GGCAAAACGGATAGACCCCA 60.035 55.000 0.00 0.00 34.64 4.96
1994 2124 1.092348 GCAAAACGGATAGACCCCAC 58.908 55.000 0.00 0.00 34.64 4.61
1995 2125 1.339727 GCAAAACGGATAGACCCCACT 60.340 52.381 0.00 0.00 34.64 4.00
1996 2126 2.356135 CAAAACGGATAGACCCCACTG 58.644 52.381 0.00 0.00 34.64 3.66
1997 2127 0.252197 AAACGGATAGACCCCACTGC 59.748 55.000 0.00 0.00 34.64 4.40
1998 2128 1.623542 AACGGATAGACCCCACTGCC 61.624 60.000 0.00 0.00 34.64 4.85
1999 2129 2.808206 CGGATAGACCCCACTGCCC 61.808 68.421 0.00 0.00 34.64 5.36
2000 2130 1.692749 GGATAGACCCCACTGCCCA 60.693 63.158 0.00 0.00 0.00 5.36
2001 2131 1.700042 GGATAGACCCCACTGCCCAG 61.700 65.000 0.00 0.00 0.00 4.45
2002 2132 2.330924 GATAGACCCCACTGCCCAGC 62.331 65.000 0.00 0.00 0.00 4.85
2014 2144 4.457496 CCCAGCGCGTGACATCCT 62.457 66.667 8.43 0.00 0.00 3.24
2015 2145 3.190849 CCAGCGCGTGACATCCTG 61.191 66.667 8.43 4.15 0.00 3.86
2016 2146 2.125952 CAGCGCGTGACATCCTGA 60.126 61.111 8.43 0.00 0.00 3.86
2017 2147 1.737735 CAGCGCGTGACATCCTGAA 60.738 57.895 8.43 0.00 0.00 3.02
2018 2148 1.738099 AGCGCGTGACATCCTGAAC 60.738 57.895 8.43 0.00 0.00 3.18
2019 2149 2.740714 GCGCGTGACATCCTGAACC 61.741 63.158 8.43 0.00 0.00 3.62
2020 2150 2.100631 CGCGTGACATCCTGAACCC 61.101 63.158 0.00 0.00 0.00 4.11
2021 2151 1.003839 GCGTGACATCCTGAACCCA 60.004 57.895 0.00 0.00 0.00 4.51
2022 2152 0.392998 GCGTGACATCCTGAACCCAT 60.393 55.000 0.00 0.00 0.00 4.00
2023 2153 1.656652 CGTGACATCCTGAACCCATC 58.343 55.000 0.00 0.00 0.00 3.51
2024 2154 1.208052 CGTGACATCCTGAACCCATCT 59.792 52.381 0.00 0.00 0.00 2.90
2025 2155 2.355108 CGTGACATCCTGAACCCATCTT 60.355 50.000 0.00 0.00 0.00 2.40
2026 2156 3.690460 GTGACATCCTGAACCCATCTTT 58.310 45.455 0.00 0.00 0.00 2.52
2027 2157 3.441572 GTGACATCCTGAACCCATCTTTG 59.558 47.826 0.00 0.00 0.00 2.77
2028 2158 3.074390 TGACATCCTGAACCCATCTTTGT 59.926 43.478 0.00 0.00 0.00 2.83
2029 2159 4.082125 GACATCCTGAACCCATCTTTGTT 58.918 43.478 0.00 0.00 0.00 2.83
2030 2160 4.082125 ACATCCTGAACCCATCTTTGTTC 58.918 43.478 0.00 0.00 40.94 3.18
2031 2161 2.778299 TCCTGAACCCATCTTTGTTCG 58.222 47.619 0.00 0.00 42.93 3.95
2032 2162 2.105821 TCCTGAACCCATCTTTGTTCGT 59.894 45.455 0.00 0.00 42.93 3.85
2033 2163 2.884639 CCTGAACCCATCTTTGTTCGTT 59.115 45.455 0.00 0.00 42.93 3.85
2034 2164 3.317993 CCTGAACCCATCTTTGTTCGTTT 59.682 43.478 0.00 0.00 42.93 3.60
2035 2165 4.202111 CCTGAACCCATCTTTGTTCGTTTT 60.202 41.667 0.00 0.00 42.93 2.43
2036 2166 4.677584 TGAACCCATCTTTGTTCGTTTTG 58.322 39.130 0.00 0.00 42.93 2.44
2037 2167 4.158764 TGAACCCATCTTTGTTCGTTTTGT 59.841 37.500 0.00 0.00 42.93 2.83
2038 2168 4.040445 ACCCATCTTTGTTCGTTTTGTG 57.960 40.909 0.00 0.00 0.00 3.33
2039 2169 3.445805 ACCCATCTTTGTTCGTTTTGTGT 59.554 39.130 0.00 0.00 0.00 3.72
2040 2170 4.041723 CCCATCTTTGTTCGTTTTGTGTC 58.958 43.478 0.00 0.00 0.00 3.67
2041 2171 4.041723 CCATCTTTGTTCGTTTTGTGTCC 58.958 43.478 0.00 0.00 0.00 4.02
2042 2172 3.392769 TCTTTGTTCGTTTTGTGTCCG 57.607 42.857 0.00 0.00 0.00 4.79
2043 2173 3.001414 TCTTTGTTCGTTTTGTGTCCGA 58.999 40.909 0.00 0.00 0.00 4.55
2044 2174 2.810028 TTGTTCGTTTTGTGTCCGAC 57.190 45.000 0.00 0.00 0.00 4.79
2045 2175 1.008329 TGTTCGTTTTGTGTCCGACC 58.992 50.000 0.00 0.00 0.00 4.79
2046 2176 0.305617 GTTCGTTTTGTGTCCGACCC 59.694 55.000 0.00 0.00 0.00 4.46
2047 2177 1.152989 TTCGTTTTGTGTCCGACCCG 61.153 55.000 0.00 0.00 0.00 5.28
2048 2178 1.592131 CGTTTTGTGTCCGACCCGA 60.592 57.895 0.00 0.00 0.00 5.14
2049 2179 1.824272 CGTTTTGTGTCCGACCCGAC 61.824 60.000 0.00 0.00 0.00 4.79
2050 2180 1.227615 TTTTGTGTCCGACCCGACC 60.228 57.895 0.00 0.00 31.35 4.79
2051 2181 2.663423 TTTTGTGTCCGACCCGACCC 62.663 60.000 0.00 0.00 31.35 4.46
2052 2182 4.918278 TGTGTCCGACCCGACCCA 62.918 66.667 0.00 0.00 31.35 4.51
2053 2183 3.387947 GTGTCCGACCCGACCCAT 61.388 66.667 0.00 0.00 31.35 4.00
2054 2184 2.605295 TGTCCGACCCGACCCATT 60.605 61.111 0.00 0.00 31.35 3.16
2055 2185 2.186125 GTCCGACCCGACCCATTC 59.814 66.667 0.00 0.00 0.00 2.67
2056 2186 2.284039 TCCGACCCGACCCATTCA 60.284 61.111 0.00 0.00 0.00 2.57
2057 2187 1.914263 TCCGACCCGACCCATTCAA 60.914 57.895 0.00 0.00 0.00 2.69
2058 2188 1.003112 CCGACCCGACCCATTCAAA 60.003 57.895 0.00 0.00 0.00 2.69
2059 2189 0.393808 CCGACCCGACCCATTCAAAT 60.394 55.000 0.00 0.00 0.00 2.32
2069 2199 2.566724 ACCCATTCAAATGCAAACGGAT 59.433 40.909 0.00 0.00 35.08 4.18
2071 2201 3.587923 CCATTCAAATGCAAACGGATGT 58.412 40.909 0.00 0.00 35.08 3.06
2123 2253 1.121407 CGGCCATCTATCTCCCACCA 61.121 60.000 2.24 0.00 0.00 4.17
2125 2255 1.428869 GCCATCTATCTCCCACCACT 58.571 55.000 0.00 0.00 0.00 4.00
2168 2298 2.746375 GGCCCCATCTGTCATCCGT 61.746 63.158 0.00 0.00 0.00 4.69
2194 2324 3.518003 GCGGTAGGCGTCCTTCTA 58.482 61.111 3.71 0.00 34.61 2.10
2200 2330 3.677976 CGGTAGGCGTCCTTCTAAAATGT 60.678 47.826 3.71 0.00 34.61 2.71
2243 2373 4.803426 CGCTCCCACTCCAGTCGC 62.803 72.222 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.429141 GACGAGCCTCGACACCGA 61.429 66.667 22.80 0.00 43.74 4.69
1 2 3.432588 AGACGAGCCTCGACACCG 61.433 66.667 22.80 0.00 43.74 4.94
4 5 2.983592 TGCAGACGAGCCTCGACA 60.984 61.111 22.80 10.20 43.74 4.35
5 6 2.505118 GTGCAGACGAGCCTCGAC 60.505 66.667 22.80 15.36 43.74 4.20
6 7 3.749064 GGTGCAGACGAGCCTCGA 61.749 66.667 22.80 0.00 43.74 4.04
7 8 4.803426 GGGTGCAGACGAGCCTCG 62.803 72.222 13.52 13.52 46.93 4.63
8 9 2.527951 AATGGGTGCAGACGAGCCTC 62.528 60.000 0.00 0.00 31.85 4.70
9 10 2.527951 GAATGGGTGCAGACGAGCCT 62.528 60.000 0.00 0.00 31.85 4.58
10 11 2.045926 AATGGGTGCAGACGAGCC 60.046 61.111 0.00 0.00 0.00 4.70
11 12 1.364626 CTGAATGGGTGCAGACGAGC 61.365 60.000 0.00 0.00 34.06 5.03
12 13 0.742281 CCTGAATGGGTGCAGACGAG 60.742 60.000 0.00 0.00 34.06 4.18
13 14 1.191489 TCCTGAATGGGTGCAGACGA 61.191 55.000 0.00 0.00 34.06 4.20
14 15 0.321564 TTCCTGAATGGGTGCAGACG 60.322 55.000 0.00 0.00 34.06 4.18
15 16 1.909700 TTTCCTGAATGGGTGCAGAC 58.090 50.000 0.00 0.00 34.06 3.51
16 17 2.673775 TTTTCCTGAATGGGTGCAGA 57.326 45.000 0.00 0.00 34.06 4.26
17 18 4.038402 GGATATTTTCCTGAATGGGTGCAG 59.962 45.833 0.00 0.00 41.78 4.41
18 19 3.960102 GGATATTTTCCTGAATGGGTGCA 59.040 43.478 0.00 0.00 41.78 4.57
19 20 4.590850 GGATATTTTCCTGAATGGGTGC 57.409 45.455 0.00 0.00 41.78 5.01
76 77 8.385898 ACCTCACGTGATAAATTGTCTAAAAA 57.614 30.769 20.40 0.00 0.00 1.94
77 78 7.972832 ACCTCACGTGATAAATTGTCTAAAA 57.027 32.000 20.40 0.00 0.00 1.52
78 79 7.148705 CGAACCTCACGTGATAAATTGTCTAAA 60.149 37.037 20.40 0.00 0.00 1.85
79 80 6.309494 CGAACCTCACGTGATAAATTGTCTAA 59.691 38.462 20.40 0.00 0.00 2.10
80 81 5.803461 CGAACCTCACGTGATAAATTGTCTA 59.197 40.000 20.40 0.00 0.00 2.59
81 82 4.625742 CGAACCTCACGTGATAAATTGTCT 59.374 41.667 20.40 0.00 0.00 3.41
82 83 4.724036 GCGAACCTCACGTGATAAATTGTC 60.724 45.833 20.40 8.74 0.00 3.18
83 84 3.124636 GCGAACCTCACGTGATAAATTGT 59.875 43.478 20.40 6.91 0.00 2.71
84 85 3.370978 AGCGAACCTCACGTGATAAATTG 59.629 43.478 20.40 10.61 0.00 2.32
85 86 3.596214 AGCGAACCTCACGTGATAAATT 58.404 40.909 20.40 10.79 0.00 1.82
86 87 3.187700 GAGCGAACCTCACGTGATAAAT 58.812 45.455 20.40 5.84 40.45 1.40
87 88 2.602878 GAGCGAACCTCACGTGATAAA 58.397 47.619 20.40 0.00 40.45 1.40
88 89 1.135199 GGAGCGAACCTCACGTGATAA 60.135 52.381 20.40 0.00 42.62 1.75
89 90 0.454600 GGAGCGAACCTCACGTGATA 59.545 55.000 20.40 0.00 42.62 2.15
90 91 1.215647 GGAGCGAACCTCACGTGAT 59.784 57.895 20.40 3.85 42.62 3.06
91 92 1.740332 TTGGAGCGAACCTCACGTGA 61.740 55.000 18.88 18.88 42.62 4.35
92 93 0.878523 TTTGGAGCGAACCTCACGTG 60.879 55.000 9.94 9.94 42.62 4.49
93 94 0.034896 ATTTGGAGCGAACCTCACGT 59.965 50.000 0.00 0.00 42.62 4.49
94 95 1.156736 AATTTGGAGCGAACCTCACG 58.843 50.000 0.00 0.00 42.62 4.35
95 96 2.552315 TCAAATTTGGAGCGAACCTCAC 59.448 45.455 17.90 0.00 42.62 3.51
96 97 2.813754 CTCAAATTTGGAGCGAACCTCA 59.186 45.455 17.90 0.00 42.62 3.86
97 98 3.074412 TCTCAAATTTGGAGCGAACCTC 58.926 45.455 17.90 0.00 39.98 3.85
98 99 3.140325 TCTCAAATTTGGAGCGAACCT 57.860 42.857 17.90 0.00 32.38 3.50
99 100 3.440173 TGATCTCAAATTTGGAGCGAACC 59.560 43.478 17.90 7.18 32.38 3.62
100 101 4.685169 TGATCTCAAATTTGGAGCGAAC 57.315 40.909 17.90 8.93 32.38 3.95
101 102 5.902613 AATGATCTCAAATTTGGAGCGAA 57.097 34.783 17.90 3.54 32.38 4.70
102 103 5.643664 CAAATGATCTCAAATTTGGAGCGA 58.356 37.500 17.90 9.86 39.19 4.93
103 104 5.944049 CAAATGATCTCAAATTTGGAGCG 57.056 39.130 17.90 5.11 39.19 5.03
108 109 8.301720 TCAGAAGTCCAAATGATCTCAAATTTG 58.698 33.333 12.15 12.15 41.41 2.32
109 110 8.413309 TCAGAAGTCCAAATGATCTCAAATTT 57.587 30.769 0.00 0.00 0.00 1.82
110 111 7.886970 TCTCAGAAGTCCAAATGATCTCAAATT 59.113 33.333 0.00 0.00 0.00 1.82
111 112 7.400439 TCTCAGAAGTCCAAATGATCTCAAAT 58.600 34.615 0.00 0.00 0.00 2.32
112 113 6.772605 TCTCAGAAGTCCAAATGATCTCAAA 58.227 36.000 0.00 0.00 0.00 2.69
113 114 6.364568 TCTCAGAAGTCCAAATGATCTCAA 57.635 37.500 0.00 0.00 0.00 3.02
114 115 6.364568 TTCTCAGAAGTCCAAATGATCTCA 57.635 37.500 0.00 0.00 0.00 3.27
115 116 5.294060 GCTTCTCAGAAGTCCAAATGATCTC 59.706 44.000 16.04 0.00 0.00 2.75
116 117 5.045724 AGCTTCTCAGAAGTCCAAATGATCT 60.046 40.000 16.04 0.00 0.00 2.75
117 118 5.184711 AGCTTCTCAGAAGTCCAAATGATC 58.815 41.667 16.04 0.00 0.00 2.92
118 119 5.045724 AGAGCTTCTCAGAAGTCCAAATGAT 60.046 40.000 16.04 0.00 32.06 2.45
119 120 4.285517 AGAGCTTCTCAGAAGTCCAAATGA 59.714 41.667 16.04 0.00 32.06 2.57
120 121 4.577875 AGAGCTTCTCAGAAGTCCAAATG 58.422 43.478 16.04 0.00 32.06 2.32
121 122 4.831107 GAGAGCTTCTCAGAAGTCCAAAT 58.169 43.478 16.04 0.00 42.90 2.32
122 123 4.264460 GAGAGCTTCTCAGAAGTCCAAA 57.736 45.455 16.04 0.00 42.90 3.28
123 124 3.951775 GAGAGCTTCTCAGAAGTCCAA 57.048 47.619 16.04 0.00 42.90 3.53
148 149 5.725362 TGTTTTCACCCGATTTGTCTTTTT 58.275 33.333 0.00 0.00 0.00 1.94
149 150 5.105513 ACTGTTTTCACCCGATTTGTCTTTT 60.106 36.000 0.00 0.00 0.00 2.27
150 151 4.401202 ACTGTTTTCACCCGATTTGTCTTT 59.599 37.500 0.00 0.00 0.00 2.52
151 152 3.951680 ACTGTTTTCACCCGATTTGTCTT 59.048 39.130 0.00 0.00 0.00 3.01
152 153 3.315191 CACTGTTTTCACCCGATTTGTCT 59.685 43.478 0.00 0.00 0.00 3.41
153 154 3.628017 CACTGTTTTCACCCGATTTGTC 58.372 45.455 0.00 0.00 0.00 3.18
154 155 2.223711 GCACTGTTTTCACCCGATTTGT 60.224 45.455 0.00 0.00 0.00 2.83
155 156 2.223688 TGCACTGTTTTCACCCGATTTG 60.224 45.455 0.00 0.00 0.00 2.32
156 157 2.028130 TGCACTGTTTTCACCCGATTT 58.972 42.857 0.00 0.00 0.00 2.17
157 158 1.686355 TGCACTGTTTTCACCCGATT 58.314 45.000 0.00 0.00 0.00 3.34
158 159 1.541147 CATGCACTGTTTTCACCCGAT 59.459 47.619 0.00 0.00 0.00 4.18
159 160 0.950836 CATGCACTGTTTTCACCCGA 59.049 50.000 0.00 0.00 0.00 5.14
160 161 0.950836 TCATGCACTGTTTTCACCCG 59.049 50.000 0.00 0.00 0.00 5.28
161 162 2.100584 TGTTCATGCACTGTTTTCACCC 59.899 45.455 0.00 0.00 0.00 4.61
162 163 3.181487 ACTGTTCATGCACTGTTTTCACC 60.181 43.478 2.30 0.00 0.00 4.02
163 164 4.032703 ACTGTTCATGCACTGTTTTCAC 57.967 40.909 2.30 0.00 0.00 3.18
164 165 5.826601 TTACTGTTCATGCACTGTTTTCA 57.173 34.783 12.69 0.00 31.81 2.69
165 166 6.033341 TGTTTACTGTTCATGCACTGTTTTC 58.967 36.000 12.69 5.37 31.81 2.29
166 167 5.960113 TGTTTACTGTTCATGCACTGTTTT 58.040 33.333 12.69 0.00 31.81 2.43
167 168 5.574891 TGTTTACTGTTCATGCACTGTTT 57.425 34.783 12.69 0.00 31.81 2.83
168 169 5.772825 ATGTTTACTGTTCATGCACTGTT 57.227 34.783 12.69 0.00 31.81 3.16
169 170 5.772825 AATGTTTACTGTTCATGCACTGT 57.227 34.783 12.17 12.17 33.75 3.55
170 171 7.467557 AAAAATGTTTACTGTTCATGCACTG 57.532 32.000 0.00 1.01 0.00 3.66
171 172 8.194104 TGTAAAAATGTTTACTGTTCATGCACT 58.806 29.630 17.45 0.00 46.29 4.40
172 173 8.346476 TGTAAAAATGTTTACTGTTCATGCAC 57.654 30.769 17.45 0.00 46.29 4.57
173 174 8.409371 TCTGTAAAAATGTTTACTGTTCATGCA 58.591 29.630 17.45 0.00 46.29 3.96
174 175 8.690840 GTCTGTAAAAATGTTTACTGTTCATGC 58.309 33.333 17.45 4.59 46.29 4.06
175 176 9.180678 GGTCTGTAAAAATGTTTACTGTTCATG 57.819 33.333 17.45 0.00 46.29 3.07
176 177 8.357402 GGGTCTGTAAAAATGTTTACTGTTCAT 58.643 33.333 17.45 0.00 46.29 2.57
177 178 7.558444 AGGGTCTGTAAAAATGTTTACTGTTCA 59.442 33.333 17.45 1.80 46.29 3.18
178 179 7.860872 CAGGGTCTGTAAAAATGTTTACTGTTC 59.139 37.037 17.45 13.68 46.29 3.18
179 180 7.558444 TCAGGGTCTGTAAAAATGTTTACTGTT 59.442 33.333 17.45 5.03 46.29 3.16
180 181 7.057894 TCAGGGTCTGTAAAAATGTTTACTGT 58.942 34.615 17.45 1.50 46.29 3.55
181 182 7.504924 TCAGGGTCTGTAAAAATGTTTACTG 57.495 36.000 17.45 16.56 46.29 2.74
182 183 8.706322 ATTCAGGGTCTGTAAAAATGTTTACT 57.294 30.769 17.45 0.00 46.29 2.24
183 184 9.758651 AAATTCAGGGTCTGTAAAAATGTTTAC 57.241 29.630 11.06 11.06 46.31 2.01
184 185 9.757227 CAAATTCAGGGTCTGTAAAAATGTTTA 57.243 29.630 0.00 0.00 32.61 2.01
185 186 8.264347 ACAAATTCAGGGTCTGTAAAAATGTTT 58.736 29.630 0.00 0.00 32.61 2.83
186 187 7.791029 ACAAATTCAGGGTCTGTAAAAATGTT 58.209 30.769 0.00 0.00 32.61 2.71
187 188 7.360113 ACAAATTCAGGGTCTGTAAAAATGT 57.640 32.000 0.00 0.00 32.61 2.71
188 189 6.868339 GGACAAATTCAGGGTCTGTAAAAATG 59.132 38.462 0.00 0.00 32.61 2.32
189 190 6.782494 AGGACAAATTCAGGGTCTGTAAAAAT 59.218 34.615 0.00 0.00 32.61 1.82
190 191 6.133356 AGGACAAATTCAGGGTCTGTAAAAA 58.867 36.000 0.00 0.00 32.61 1.94
191 192 5.701224 AGGACAAATTCAGGGTCTGTAAAA 58.299 37.500 0.00 0.00 32.61 1.52
192 193 5.319043 AGGACAAATTCAGGGTCTGTAAA 57.681 39.130 0.00 0.00 32.61 2.01
193 194 4.993705 AGGACAAATTCAGGGTCTGTAA 57.006 40.909 0.00 0.00 32.61 2.41
194 195 4.993705 AAGGACAAATTCAGGGTCTGTA 57.006 40.909 0.00 0.00 32.61 2.74
195 196 3.884037 AAGGACAAATTCAGGGTCTGT 57.116 42.857 0.00 0.00 32.61 3.41
196 197 5.535753 AAAAAGGACAAATTCAGGGTCTG 57.464 39.130 0.00 0.00 0.00 3.51
197 198 5.538813 GGTAAAAAGGACAAATTCAGGGTCT 59.461 40.000 0.00 0.00 0.00 3.85
198 199 5.564063 CGGTAAAAAGGACAAATTCAGGGTC 60.564 44.000 0.00 0.00 0.00 4.46
199 200 4.279922 CGGTAAAAAGGACAAATTCAGGGT 59.720 41.667 0.00 0.00 0.00 4.34
200 201 4.521256 TCGGTAAAAAGGACAAATTCAGGG 59.479 41.667 0.00 0.00 0.00 4.45
201 202 5.472137 TCTCGGTAAAAAGGACAAATTCAGG 59.528 40.000 0.00 0.00 0.00 3.86
202 203 6.426937 TCTCTCGGTAAAAAGGACAAATTCAG 59.573 38.462 0.00 0.00 0.00 3.02
203 204 6.292923 TCTCTCGGTAAAAAGGACAAATTCA 58.707 36.000 0.00 0.00 0.00 2.57
204 205 6.796705 TCTCTCGGTAAAAAGGACAAATTC 57.203 37.500 0.00 0.00 0.00 2.17
205 206 6.349363 GCATCTCTCGGTAAAAAGGACAAATT 60.349 38.462 0.00 0.00 0.00 1.82
206 207 5.123979 GCATCTCTCGGTAAAAAGGACAAAT 59.876 40.000 0.00 0.00 0.00 2.32
207 208 4.454504 GCATCTCTCGGTAAAAAGGACAAA 59.545 41.667 0.00 0.00 0.00 2.83
208 209 4.000988 GCATCTCTCGGTAAAAAGGACAA 58.999 43.478 0.00 0.00 0.00 3.18
209 210 3.260884 AGCATCTCTCGGTAAAAAGGACA 59.739 43.478 0.00 0.00 0.00 4.02
210 211 3.863041 AGCATCTCTCGGTAAAAAGGAC 58.137 45.455 0.00 0.00 0.00 3.85
211 212 3.513912 TGAGCATCTCTCGGTAAAAAGGA 59.486 43.478 0.00 0.00 44.86 3.36
212 213 3.861840 TGAGCATCTCTCGGTAAAAAGG 58.138 45.455 0.00 0.00 44.86 3.11
213 214 6.703607 ACATATGAGCATCTCTCGGTAAAAAG 59.296 38.462 10.38 0.00 44.86 2.27
214 215 6.582636 ACATATGAGCATCTCTCGGTAAAAA 58.417 36.000 10.38 0.00 44.86 1.94
215 216 6.161855 ACATATGAGCATCTCTCGGTAAAA 57.838 37.500 10.38 0.00 44.86 1.52
216 217 5.279006 GGACATATGAGCATCTCTCGGTAAA 60.279 44.000 10.38 0.00 44.86 2.01
217 218 4.218635 GGACATATGAGCATCTCTCGGTAA 59.781 45.833 10.38 0.00 44.86 2.85
218 219 3.759086 GGACATATGAGCATCTCTCGGTA 59.241 47.826 10.38 0.00 44.86 4.02
219 220 2.560542 GGACATATGAGCATCTCTCGGT 59.439 50.000 10.38 0.00 44.86 4.69
220 221 2.560105 TGGACATATGAGCATCTCTCGG 59.440 50.000 10.38 0.00 44.86 4.63
221 222 3.930634 TGGACATATGAGCATCTCTCG 57.069 47.619 10.38 0.00 44.86 4.04
222 223 6.228995 TCATTTGGACATATGAGCATCTCTC 58.771 40.000 10.38 0.00 42.23 3.20
223 224 6.183810 TCATTTGGACATATGAGCATCTCT 57.816 37.500 10.38 0.00 34.92 3.10
224 225 7.450124 AATCATTTGGACATATGAGCATCTC 57.550 36.000 10.38 0.00 33.48 2.75
225 226 7.834881 AAATCATTTGGACATATGAGCATCT 57.165 32.000 10.38 0.00 33.48 2.90
226 227 9.970395 TTTAAATCATTTGGACATATGAGCATC 57.030 29.630 10.38 0.00 33.48 3.91
236 237 8.494347 CGCTTCAATTTTTAAATCATTTGGACA 58.506 29.630 0.00 0.00 0.00 4.02
237 238 8.495148 ACGCTTCAATTTTTAAATCATTTGGAC 58.505 29.630 0.00 0.00 0.00 4.02
238 239 8.600449 ACGCTTCAATTTTTAAATCATTTGGA 57.400 26.923 0.00 0.00 0.00 3.53
239 240 9.739786 GTACGCTTCAATTTTTAAATCATTTGG 57.260 29.630 0.00 0.00 0.00 3.28
240 241 9.739786 GGTACGCTTCAATTTTTAAATCATTTG 57.260 29.630 0.00 0.00 0.00 2.32
241 242 9.705290 AGGTACGCTTCAATTTTTAAATCATTT 57.295 25.926 0.00 0.00 0.00 2.32
242 243 9.353999 GAGGTACGCTTCAATTTTTAAATCATT 57.646 29.630 0.00 0.00 0.00 2.57
243 244 8.519526 TGAGGTACGCTTCAATTTTTAAATCAT 58.480 29.630 0.00 0.00 0.00 2.45
244 245 7.806014 GTGAGGTACGCTTCAATTTTTAAATCA 59.194 33.333 0.00 0.00 32.39 2.57
245 246 7.007099 CGTGAGGTACGCTTCAATTTTTAAATC 59.993 37.037 0.00 0.00 46.92 2.17
246 247 6.799925 CGTGAGGTACGCTTCAATTTTTAAAT 59.200 34.615 0.00 0.00 46.92 1.40
247 248 6.137415 CGTGAGGTACGCTTCAATTTTTAAA 58.863 36.000 0.00 0.00 46.92 1.52
248 249 5.681880 CGTGAGGTACGCTTCAATTTTTAA 58.318 37.500 0.00 0.00 46.92 1.52
249 250 5.272167 CGTGAGGTACGCTTCAATTTTTA 57.728 39.130 0.00 0.00 46.92 1.52
250 251 4.141855 CGTGAGGTACGCTTCAATTTTT 57.858 40.909 0.00 0.00 46.92 1.94
251 252 3.806316 CGTGAGGTACGCTTCAATTTT 57.194 42.857 0.00 0.00 46.92 1.82
262 263 6.924060 AGTAGATAATTTGATGCGTGAGGTAC 59.076 38.462 0.00 0.00 0.00 3.34
263 264 7.050970 AGTAGATAATTTGATGCGTGAGGTA 57.949 36.000 0.00 0.00 0.00 3.08
264 265 5.918608 AGTAGATAATTTGATGCGTGAGGT 58.081 37.500 0.00 0.00 0.00 3.85
265 266 6.923508 TGTAGTAGATAATTTGATGCGTGAGG 59.076 38.462 0.00 0.00 0.00 3.86
266 267 7.435192 TGTGTAGTAGATAATTTGATGCGTGAG 59.565 37.037 0.00 0.00 0.00 3.51
267 268 7.222031 GTGTGTAGTAGATAATTTGATGCGTGA 59.778 37.037 0.00 0.00 0.00 4.35
268 269 7.010091 TGTGTGTAGTAGATAATTTGATGCGTG 59.990 37.037 0.00 0.00 0.00 5.34
269 270 7.039270 TGTGTGTAGTAGATAATTTGATGCGT 58.961 34.615 0.00 0.00 0.00 5.24
270 271 7.463469 TGTGTGTAGTAGATAATTTGATGCG 57.537 36.000 0.00 0.00 0.00 4.73
340 341 0.892063 GCACCCGCCCTTATGAAAAA 59.108 50.000 0.00 0.00 0.00 1.94
341 342 0.251386 TGCACCCGCCCTTATGAAAA 60.251 50.000 0.00 0.00 37.32 2.29
342 343 0.679640 CTGCACCCGCCCTTATGAAA 60.680 55.000 0.00 0.00 37.32 2.69
343 344 1.077787 CTGCACCCGCCCTTATGAA 60.078 57.895 0.00 0.00 37.32 2.57
344 345 2.589540 CTGCACCCGCCCTTATGA 59.410 61.111 0.00 0.00 37.32 2.15
345 346 3.211963 GCTGCACCCGCCCTTATG 61.212 66.667 0.00 0.00 37.32 1.90
346 347 3.411517 AGCTGCACCCGCCCTTAT 61.412 61.111 1.02 0.00 37.32 1.73
347 348 4.408821 CAGCTGCACCCGCCCTTA 62.409 66.667 0.00 0.00 37.32 2.69
353 354 3.583276 TAACGGTCAGCTGCACCCG 62.583 63.158 27.08 27.08 45.72 5.28
354 355 2.033194 GTAACGGTCAGCTGCACCC 61.033 63.158 22.03 15.13 0.00 4.61
355 356 1.004918 AGTAACGGTCAGCTGCACC 60.005 57.895 19.58 19.58 0.00 5.01
356 357 2.153913 CAGTAACGGTCAGCTGCAC 58.846 57.895 9.47 8.27 0.00 4.57
357 358 4.673403 CAGTAACGGTCAGCTGCA 57.327 55.556 9.47 0.00 0.00 4.41
358 359 3.169198 GCAGTAACGGTCAGCTGC 58.831 61.111 9.47 13.08 45.70 5.25
359 360 0.320771 AAGGCAGTAACGGTCAGCTG 60.321 55.000 7.63 7.63 0.00 4.24
360 361 1.263356 TAAGGCAGTAACGGTCAGCT 58.737 50.000 0.00 0.00 0.00 4.24
361 362 2.202566 GATAAGGCAGTAACGGTCAGC 58.797 52.381 0.00 0.00 0.00 4.26
362 363 2.798499 CGGATAAGGCAGTAACGGTCAG 60.798 54.545 0.00 0.00 0.00 3.51
363 364 1.135527 CGGATAAGGCAGTAACGGTCA 59.864 52.381 0.00 0.00 0.00 4.02
364 365 1.135721 ACGGATAAGGCAGTAACGGTC 59.864 52.381 0.00 0.00 0.00 4.79
365 366 1.134907 CACGGATAAGGCAGTAACGGT 60.135 52.381 0.00 0.00 0.00 4.83
366 367 1.134907 ACACGGATAAGGCAGTAACGG 60.135 52.381 0.00 0.00 0.00 4.44
367 368 1.924524 CACACGGATAAGGCAGTAACG 59.075 52.381 0.00 0.00 0.00 3.18
368 369 2.968675 ACACACGGATAAGGCAGTAAC 58.031 47.619 0.00 0.00 0.00 2.50
369 370 3.765511 AGTACACACGGATAAGGCAGTAA 59.234 43.478 0.00 0.00 0.00 2.24
370 371 3.359033 AGTACACACGGATAAGGCAGTA 58.641 45.455 0.00 0.00 0.00 2.74
371 372 2.176889 AGTACACACGGATAAGGCAGT 58.823 47.619 0.00 0.00 0.00 4.40
372 373 2.961526 AGTACACACGGATAAGGCAG 57.038 50.000 0.00 0.00 0.00 4.85
373 374 3.090790 TGTAGTACACACGGATAAGGCA 58.909 45.455 0.00 0.00 30.04 4.75
374 375 3.788333 TGTAGTACACACGGATAAGGC 57.212 47.619 0.00 0.00 30.04 4.35
375 376 4.110482 GCTTGTAGTACACACGGATAAGG 58.890 47.826 1.43 0.00 36.69 2.69
376 377 4.740268 TGCTTGTAGTACACACGGATAAG 58.260 43.478 1.43 0.00 36.69 1.73
377 378 4.219070 ACTGCTTGTAGTACACACGGATAA 59.781 41.667 14.61 0.00 36.69 1.75
378 379 3.760151 ACTGCTTGTAGTACACACGGATA 59.240 43.478 14.61 0.00 36.69 2.59
379 380 2.561419 ACTGCTTGTAGTACACACGGAT 59.439 45.455 14.61 0.97 36.69 4.18
380 381 1.958579 ACTGCTTGTAGTACACACGGA 59.041 47.619 14.61 3.45 36.69 4.69
381 382 2.433868 ACTGCTTGTAGTACACACGG 57.566 50.000 1.43 5.81 36.69 4.94
382 383 4.262277 CGATAACTGCTTGTAGTACACACG 59.738 45.833 1.43 0.00 36.69 4.49
383 384 5.060569 CACGATAACTGCTTGTAGTACACAC 59.939 44.000 1.43 0.00 36.69 3.82
384 385 5.158494 CACGATAACTGCTTGTAGTACACA 58.842 41.667 1.43 0.00 34.51 3.72
385 386 5.159209 ACACGATAACTGCTTGTAGTACAC 58.841 41.667 1.43 0.00 0.00 2.90
386 387 5.381174 ACACGATAACTGCTTGTAGTACA 57.619 39.130 0.00 0.00 0.00 2.90
387 388 4.494764 CGACACGATAACTGCTTGTAGTAC 59.505 45.833 0.00 0.00 0.00 2.73
388 389 4.655027 CGACACGATAACTGCTTGTAGTA 58.345 43.478 0.00 0.00 0.00 1.82
389 390 3.499048 CGACACGATAACTGCTTGTAGT 58.501 45.455 0.00 0.00 0.00 2.73
390 391 2.279136 GCGACACGATAACTGCTTGTAG 59.721 50.000 0.00 0.00 0.00 2.74
391 392 2.256174 GCGACACGATAACTGCTTGTA 58.744 47.619 0.00 0.00 0.00 2.41
392 393 1.068474 GCGACACGATAACTGCTTGT 58.932 50.000 0.00 0.00 0.00 3.16
393 394 1.067693 TGCGACACGATAACTGCTTG 58.932 50.000 0.00 0.00 0.00 4.01
394 395 1.068474 GTGCGACACGATAACTGCTT 58.932 50.000 0.00 0.00 0.00 3.91
395 396 0.736325 GGTGCGACACGATAACTGCT 60.736 55.000 0.00 0.00 34.83 4.24
396 397 1.693083 GGGTGCGACACGATAACTGC 61.693 60.000 0.00 0.00 34.83 4.40
397 398 2.369870 GGGTGCGACACGATAACTG 58.630 57.895 0.00 0.00 34.83 3.16
398 399 4.904466 GGGTGCGACACGATAACT 57.096 55.556 0.00 0.00 34.83 2.24
411 412 3.403057 CAGACGTCGTTGCGGGTG 61.403 66.667 10.46 0.00 35.98 4.61
412 413 3.908081 ACAGACGTCGTTGCGGGT 61.908 61.111 10.46 0.00 35.98 5.28
413 414 3.403057 CACAGACGTCGTTGCGGG 61.403 66.667 10.46 0.00 35.98 6.13
414 415 4.059459 GCACAGACGTCGTTGCGG 62.059 66.667 23.02 9.73 35.98 5.69
415 416 3.030308 AGCACAGACGTCGTTGCG 61.030 61.111 27.81 12.10 37.94 4.85
416 417 1.487452 TTCAGCACAGACGTCGTTGC 61.487 55.000 27.40 27.40 0.00 4.17
417 418 1.125021 GATTCAGCACAGACGTCGTTG 59.875 52.381 10.46 12.19 0.00 4.10
418 419 1.419374 GATTCAGCACAGACGTCGTT 58.581 50.000 10.46 0.00 0.00 3.85
419 420 0.388649 GGATTCAGCACAGACGTCGT 60.389 55.000 10.46 8.54 0.00 4.34
420 421 0.109086 AGGATTCAGCACAGACGTCG 60.109 55.000 10.46 7.86 0.00 5.12
421 422 2.086054 AAGGATTCAGCACAGACGTC 57.914 50.000 7.70 7.70 0.00 4.34
422 423 2.146342 CAAAGGATTCAGCACAGACGT 58.854 47.619 0.00 0.00 0.00 4.34
423 424 1.466167 CCAAAGGATTCAGCACAGACG 59.534 52.381 0.00 0.00 0.00 4.18
424 425 2.783135 TCCAAAGGATTCAGCACAGAC 58.217 47.619 0.00 0.00 0.00 3.51
425 426 3.507162 TTCCAAAGGATTCAGCACAGA 57.493 42.857 0.00 0.00 0.00 3.41
426 427 4.589216 TTTTCCAAAGGATTCAGCACAG 57.411 40.909 0.00 0.00 0.00 3.66
427 428 4.648762 TCTTTTTCCAAAGGATTCAGCACA 59.351 37.500 0.00 0.00 40.08 4.57
428 429 5.010012 TCTCTTTTTCCAAAGGATTCAGCAC 59.990 40.000 0.00 0.00 40.08 4.40
429 430 5.139727 TCTCTTTTTCCAAAGGATTCAGCA 58.860 37.500 0.00 0.00 40.08 4.41
430 431 5.336293 CCTCTCTTTTTCCAAAGGATTCAGC 60.336 44.000 0.00 0.00 40.08 4.26
431 432 5.336293 GCCTCTCTTTTTCCAAAGGATTCAG 60.336 44.000 0.00 0.00 40.08 3.02
432 433 4.524328 GCCTCTCTTTTTCCAAAGGATTCA 59.476 41.667 0.00 0.00 40.08 2.57
433 434 4.524328 TGCCTCTCTTTTTCCAAAGGATTC 59.476 41.667 0.00 0.00 40.08 2.52
434 435 4.281941 GTGCCTCTCTTTTTCCAAAGGATT 59.718 41.667 0.00 0.00 40.08 3.01
435 436 3.829026 GTGCCTCTCTTTTTCCAAAGGAT 59.171 43.478 0.00 0.00 40.08 3.24
436 437 3.117512 AGTGCCTCTCTTTTTCCAAAGGA 60.118 43.478 0.00 0.00 40.08 3.36
437 438 3.225940 AGTGCCTCTCTTTTTCCAAAGG 58.774 45.455 0.00 0.00 40.08 3.11
438 439 4.926140 AAGTGCCTCTCTTTTTCCAAAG 57.074 40.909 0.00 0.00 40.91 2.77
439 440 4.099419 GGAAAGTGCCTCTCTTTTTCCAAA 59.901 41.667 8.90 0.00 43.85 3.28
440 441 3.636764 GGAAAGTGCCTCTCTTTTTCCAA 59.363 43.478 8.90 0.00 43.85 3.53
441 442 3.117512 AGGAAAGTGCCTCTCTTTTTCCA 60.118 43.478 14.56 0.00 45.78 3.53
442 443 3.491342 AGGAAAGTGCCTCTCTTTTTCC 58.509 45.455 6.25 6.25 44.43 3.13
443 444 5.521906 AAAGGAAAGTGCCTCTCTTTTTC 57.478 39.130 0.00 0.00 37.26 2.29
444 445 5.422012 TCAAAAGGAAAGTGCCTCTCTTTTT 59.578 36.000 0.00 0.00 37.26 1.94
445 446 4.956075 TCAAAAGGAAAGTGCCTCTCTTTT 59.044 37.500 0.00 0.00 37.26 2.27
446 447 4.339530 GTCAAAAGGAAAGTGCCTCTCTTT 59.660 41.667 0.00 0.00 37.26 2.52
447 448 3.885901 GTCAAAAGGAAAGTGCCTCTCTT 59.114 43.478 0.00 0.00 37.26 2.85
448 449 3.481453 GTCAAAAGGAAAGTGCCTCTCT 58.519 45.455 0.00 0.00 37.26 3.10
449 450 2.224314 CGTCAAAAGGAAAGTGCCTCTC 59.776 50.000 0.00 0.00 37.26 3.20
450 451 2.222027 CGTCAAAAGGAAAGTGCCTCT 58.778 47.619 0.00 0.00 37.26 3.69
451 452 1.266989 CCGTCAAAAGGAAAGTGCCTC 59.733 52.381 0.00 0.00 37.26 4.70
452 453 1.318576 CCGTCAAAAGGAAAGTGCCT 58.681 50.000 0.00 0.00 40.93 4.75
453 454 0.318699 GCCGTCAAAAGGAAAGTGCC 60.319 55.000 0.00 0.00 0.00 5.01
454 455 0.383949 TGCCGTCAAAAGGAAAGTGC 59.616 50.000 0.00 0.00 0.00 4.40
455 456 2.861462 TTGCCGTCAAAAGGAAAGTG 57.139 45.000 0.00 0.00 0.00 3.16
456 457 3.878160 TTTTGCCGTCAAAAGGAAAGT 57.122 38.095 0.00 0.00 44.58 2.66
464 465 3.637432 CAAGTAGCATTTTGCCGTCAAA 58.363 40.909 0.00 0.00 46.52 2.69
465 466 2.606795 GCAAGTAGCATTTTGCCGTCAA 60.607 45.455 7.58 0.00 46.52 3.18
466 467 1.068610 GCAAGTAGCATTTTGCCGTCA 60.069 47.619 7.58 0.00 46.52 4.35
467 468 1.617740 GCAAGTAGCATTTTGCCGTC 58.382 50.000 7.58 0.00 46.52 4.79
468 469 3.792716 GCAAGTAGCATTTTGCCGT 57.207 47.368 7.58 0.00 46.52 5.68
478 479 1.153147 GTAGGCCAGGGCAAGTAGC 60.153 63.158 16.94 0.00 44.11 3.58
479 480 1.144057 CGTAGGCCAGGGCAAGTAG 59.856 63.158 16.94 0.00 44.11 2.57
480 481 1.305465 TCGTAGGCCAGGGCAAGTA 60.305 57.895 16.94 0.00 44.11 2.24
520 521 2.600173 CAACGGCCCCAACCACAT 60.600 61.111 0.00 0.00 0.00 3.21
592 635 2.427506 GGGAAAGTCATCACTCACACC 58.572 52.381 0.00 0.00 29.93 4.16
596 639 0.036388 GCCGGGAAAGTCATCACTCA 60.036 55.000 2.18 0.00 29.93 3.41
599 642 0.744771 GAGGCCGGGAAAGTCATCAC 60.745 60.000 2.18 0.00 0.00 3.06
623 666 2.094894 CGCTAGCCATTCAGAACTTGTG 59.905 50.000 9.66 0.00 0.00 3.33
652 695 3.782244 CACAGAAGCGCCGTCAGC 61.782 66.667 2.29 0.00 38.52 4.26
681 724 7.046033 ACAGTTTTCGGGTAGTATTAAGATGG 58.954 38.462 0.00 0.00 0.00 3.51
682 725 9.028185 GTACAGTTTTCGGGTAGTATTAAGATG 57.972 37.037 0.00 0.00 0.00 2.90
683 726 8.752187 TGTACAGTTTTCGGGTAGTATTAAGAT 58.248 33.333 0.00 0.00 0.00 2.40
684 727 8.028938 GTGTACAGTTTTCGGGTAGTATTAAGA 58.971 37.037 0.00 0.00 0.00 2.10
686 729 7.814107 CAGTGTACAGTTTTCGGGTAGTATTAA 59.186 37.037 0.00 0.00 0.00 1.40
687 730 7.315142 CAGTGTACAGTTTTCGGGTAGTATTA 58.685 38.462 0.00 0.00 0.00 0.98
689 732 5.717119 CAGTGTACAGTTTTCGGGTAGTAT 58.283 41.667 0.00 0.00 0.00 2.12
690 733 4.559300 GCAGTGTACAGTTTTCGGGTAGTA 60.559 45.833 0.00 0.00 0.00 1.82
691 734 3.801293 GCAGTGTACAGTTTTCGGGTAGT 60.801 47.826 0.00 0.00 0.00 2.73
709 752 2.092267 TGGTATGCCATCTCAATGCAGT 60.092 45.455 0.00 0.00 40.46 4.40
712 755 1.268899 GCTGGTATGCCATCTCAATGC 59.731 52.381 1.83 0.00 45.05 3.56
723 766 0.179163 GCTCGGTTTTGCTGGTATGC 60.179 55.000 0.00 0.00 0.00 3.14
729 772 1.795768 TCAGTAGCTCGGTTTTGCTG 58.204 50.000 0.00 0.00 40.08 4.41
731 774 2.094417 GTCATCAGTAGCTCGGTTTTGC 59.906 50.000 0.00 0.00 0.00 3.68
938 991 1.035139 CTTGCTGGGCTCTGTTTGTT 58.965 50.000 0.00 0.00 0.00 2.83
939 992 0.825010 CCTTGCTGGGCTCTGTTTGT 60.825 55.000 0.00 0.00 0.00 2.83
1483 1557 1.082756 CCGTTGACTTGACTTGCGC 60.083 57.895 0.00 0.00 0.00 6.09
1487 1561 3.131396 CTGCTTACCGTTGACTTGACTT 58.869 45.455 0.00 0.00 0.00 3.01
1498 1572 1.670967 GCGACCTAAACTGCTTACCGT 60.671 52.381 0.00 0.00 0.00 4.83
1507 1581 0.460311 CGGATCTGGCGACCTAAACT 59.540 55.000 0.00 0.00 0.00 2.66
1511 1585 2.125326 CACCGGATCTGGCGACCTA 61.125 63.158 21.17 0.00 0.00 3.08
1512 1586 3.461773 CACCGGATCTGGCGACCT 61.462 66.667 21.17 0.00 0.00 3.85
1552 1630 1.608055 CATGGACTGACAAGTTGGCA 58.392 50.000 11.81 11.81 36.52 4.92
1553 1631 0.883833 CCATGGACTGACAAGTTGGC 59.116 55.000 5.56 4.40 36.52 4.52
1555 1633 1.901591 AGCCATGGACTGACAAGTTG 58.098 50.000 18.40 0.00 36.52 3.16
1556 1634 2.664402 AAGCCATGGACTGACAAGTT 57.336 45.000 18.40 0.00 36.52 2.66
1557 1635 2.508526 GAAAGCCATGGACTGACAAGT 58.491 47.619 18.40 0.00 40.21 3.16
1558 1636 1.815003 GGAAAGCCATGGACTGACAAG 59.185 52.381 18.40 0.00 0.00 3.16
1559 1637 1.425066 AGGAAAGCCATGGACTGACAA 59.575 47.619 18.40 0.00 36.29 3.18
1562 1640 1.661463 AGAGGAAAGCCATGGACTGA 58.339 50.000 18.40 0.00 36.29 3.41
1569 1647 4.851639 AGTGATACAAGAGGAAAGCCAT 57.148 40.909 0.00 0.00 36.29 4.40
1578 1656 6.977502 CCACTGAACTGATAGTGATACAAGAG 59.022 42.308 5.99 0.00 45.46 2.85
1617 1697 2.417243 GCTTATTTCTGCGCCAACCATT 60.417 45.455 4.18 0.00 0.00 3.16
1619 1699 0.525761 GCTTATTTCTGCGCCAACCA 59.474 50.000 4.18 0.00 0.00 3.67
1622 1702 1.202114 CAAGGCTTATTTCTGCGCCAA 59.798 47.619 4.18 0.00 44.85 4.52
1765 1895 9.844790 GATGATGACATTATTGTGTTCAAAAGA 57.155 29.630 0.00 0.00 35.79 2.52
1766 1896 9.850628 AGATGATGACATTATTGTGTTCAAAAG 57.149 29.630 0.00 0.00 35.79 2.27
1771 1901 9.941664 CCTTAAGATGATGACATTATTGTGTTC 57.058 33.333 3.36 0.00 35.79 3.18
1772 1902 9.466497 ACCTTAAGATGATGACATTATTGTGTT 57.534 29.630 3.36 0.00 35.79 3.32
1773 1903 8.896744 CACCTTAAGATGATGACATTATTGTGT 58.103 33.333 3.36 0.00 35.79 3.72
1774 1904 8.896744 ACACCTTAAGATGATGACATTATTGTG 58.103 33.333 3.08 0.17 35.79 3.33
1775 1905 8.896744 CACACCTTAAGATGATGACATTATTGT 58.103 33.333 3.08 0.00 39.32 2.71
1776 1906 9.112725 TCACACCTTAAGATGATGACATTATTG 57.887 33.333 3.08 0.00 36.82 1.90
1777 1907 9.857656 ATCACACCTTAAGATGATGACATTATT 57.142 29.630 3.08 0.00 36.82 1.40
1830 1960 1.312815 GGCTGGTGCATAGTCCATTC 58.687 55.000 0.00 0.00 41.91 2.67
1882 2012 2.482721 CTGGTCCGTTGCGACTTTAAAT 59.517 45.455 1.84 0.00 33.07 1.40
1953 2083 4.712425 AACGAACGAGGCCGGACG 62.712 66.667 5.05 10.34 41.33 4.79
1954 2084 2.356673 AAACGAACGAGGCCGGAC 60.357 61.111 5.05 0.00 40.78 4.79
1955 2085 2.356553 CAAACGAACGAGGCCGGA 60.357 61.111 5.05 0.00 40.78 5.14
1956 2086 2.663852 ACAAACGAACGAGGCCGG 60.664 61.111 0.00 0.00 40.78 6.13
1957 2087 2.549282 CACAAACGAACGAGGCCG 59.451 61.111 0.00 0.00 42.50 6.13
1958 2088 2.943653 CCACAAACGAACGAGGCC 59.056 61.111 0.00 0.00 0.00 5.19
1959 2089 2.054140 TTGCCACAAACGAACGAGGC 62.054 55.000 0.14 0.00 42.32 4.70
1960 2090 0.378962 TTTGCCACAAACGAACGAGG 59.621 50.000 0.14 0.00 0.00 4.63
1961 2091 1.843753 GTTTTGCCACAAACGAACGAG 59.156 47.619 0.14 0.00 0.00 4.18
1962 2092 1.897641 GTTTTGCCACAAACGAACGA 58.102 45.000 0.14 0.00 0.00 3.85
1968 2098 3.561503 GTCTATCCGTTTTGCCACAAAC 58.438 45.455 0.00 0.00 0.00 2.93
1969 2099 2.554893 GGTCTATCCGTTTTGCCACAAA 59.445 45.455 0.00 0.00 0.00 2.83
1970 2100 2.156098 GGTCTATCCGTTTTGCCACAA 58.844 47.619 0.00 0.00 0.00 3.33
1971 2101 1.612199 GGGTCTATCCGTTTTGCCACA 60.612 52.381 0.00 0.00 37.00 4.17
1972 2102 1.092348 GGGTCTATCCGTTTTGCCAC 58.908 55.000 0.00 0.00 37.00 5.01
1973 2103 0.034863 GGGGTCTATCCGTTTTGCCA 60.035 55.000 0.00 0.00 37.00 4.92
1974 2104 0.034863 TGGGGTCTATCCGTTTTGCC 60.035 55.000 0.00 0.00 37.00 4.52
1975 2105 1.092348 GTGGGGTCTATCCGTTTTGC 58.908 55.000 0.00 0.00 37.00 3.68
1976 2106 2.356135 CAGTGGGGTCTATCCGTTTTG 58.644 52.381 0.00 0.00 37.00 2.44
1977 2107 1.339727 GCAGTGGGGTCTATCCGTTTT 60.340 52.381 0.00 0.00 37.00 2.43
1978 2108 0.252197 GCAGTGGGGTCTATCCGTTT 59.748 55.000 0.00 0.00 37.00 3.60
1979 2109 1.623542 GGCAGTGGGGTCTATCCGTT 61.624 60.000 0.00 0.00 37.00 4.44
1980 2110 2.064581 GGCAGTGGGGTCTATCCGT 61.065 63.158 0.00 0.00 37.00 4.69
1981 2111 2.808206 GGGCAGTGGGGTCTATCCG 61.808 68.421 0.00 0.00 37.00 4.18
1982 2112 1.692749 TGGGCAGTGGGGTCTATCC 60.693 63.158 0.00 0.00 0.00 2.59
1983 2113 1.832912 CTGGGCAGTGGGGTCTATC 59.167 63.158 0.00 0.00 0.00 2.08
1984 2114 2.378634 GCTGGGCAGTGGGGTCTAT 61.379 63.158 0.00 0.00 0.00 1.98
1985 2115 3.009115 GCTGGGCAGTGGGGTCTA 61.009 66.667 0.00 0.00 0.00 2.59
1997 2127 4.457496 AGGATGTCACGCGCTGGG 62.457 66.667 5.73 0.00 0.00 4.45
1998 2128 3.190849 CAGGATGTCACGCGCTGG 61.191 66.667 5.73 0.00 0.00 4.85
1999 2129 1.737735 TTCAGGATGTCACGCGCTG 60.738 57.895 5.73 3.27 37.40 5.18
2000 2130 1.738099 GTTCAGGATGTCACGCGCT 60.738 57.895 5.73 0.00 37.40 5.92
2001 2131 2.740714 GGTTCAGGATGTCACGCGC 61.741 63.158 5.73 0.00 37.40 6.86
2002 2132 2.100631 GGGTTCAGGATGTCACGCG 61.101 63.158 3.53 3.53 37.40 6.01
2003 2133 0.392998 ATGGGTTCAGGATGTCACGC 60.393 55.000 0.00 0.00 37.40 5.34
2004 2134 1.208052 AGATGGGTTCAGGATGTCACG 59.792 52.381 0.00 0.00 37.40 4.35
2005 2135 3.356529 AAGATGGGTTCAGGATGTCAC 57.643 47.619 0.00 0.00 37.40 3.67
2006 2136 3.074390 ACAAAGATGGGTTCAGGATGTCA 59.926 43.478 0.00 0.00 37.40 3.58
2007 2137 3.690460 ACAAAGATGGGTTCAGGATGTC 58.310 45.455 0.00 0.00 37.40 3.06
2008 2138 3.814504 ACAAAGATGGGTTCAGGATGT 57.185 42.857 0.00 0.00 37.40 3.06
2009 2139 3.127548 CGAACAAAGATGGGTTCAGGATG 59.872 47.826 0.00 0.00 42.67 3.51
2010 2140 3.244911 ACGAACAAAGATGGGTTCAGGAT 60.245 43.478 0.00 0.00 42.67 3.24
2011 2141 2.105821 ACGAACAAAGATGGGTTCAGGA 59.894 45.455 0.00 0.00 42.67 3.86
2012 2142 2.504367 ACGAACAAAGATGGGTTCAGG 58.496 47.619 0.00 0.00 42.67 3.86
2013 2143 4.568152 AAACGAACAAAGATGGGTTCAG 57.432 40.909 0.00 0.00 42.67 3.02
2014 2144 4.158764 ACAAAACGAACAAAGATGGGTTCA 59.841 37.500 0.00 0.00 42.67 3.18
2015 2145 4.502645 CACAAAACGAACAAAGATGGGTTC 59.497 41.667 0.00 0.00 39.92 3.62
2016 2146 4.081917 ACACAAAACGAACAAAGATGGGTT 60.082 37.500 0.00 0.00 0.00 4.11
2017 2147 3.445805 ACACAAAACGAACAAAGATGGGT 59.554 39.130 0.00 0.00 0.00 4.51
2018 2148 4.040445 ACACAAAACGAACAAAGATGGG 57.960 40.909 0.00 0.00 0.00 4.00
2019 2149 4.041723 GGACACAAAACGAACAAAGATGG 58.958 43.478 0.00 0.00 0.00 3.51
2020 2150 3.723764 CGGACACAAAACGAACAAAGATG 59.276 43.478 0.00 0.00 0.00 2.90
2021 2151 3.623960 TCGGACACAAAACGAACAAAGAT 59.376 39.130 0.00 0.00 33.21 2.40
2022 2152 3.001414 TCGGACACAAAACGAACAAAGA 58.999 40.909 0.00 0.00 33.21 2.52
2023 2153 3.095738 GTCGGACACAAAACGAACAAAG 58.904 45.455 2.62 0.00 38.46 2.77
2024 2154 2.159544 GGTCGGACACAAAACGAACAAA 60.160 45.455 10.76 0.00 43.33 2.83
2025 2155 1.397692 GGTCGGACACAAAACGAACAA 59.602 47.619 10.76 0.00 43.33 2.83
2026 2156 1.008329 GGTCGGACACAAAACGAACA 58.992 50.000 10.76 0.00 43.33 3.18
2027 2157 0.305617 GGGTCGGACACAAAACGAAC 59.694 55.000 10.76 0.00 43.13 3.95
2028 2158 1.152989 CGGGTCGGACACAAAACGAA 61.153 55.000 11.50 0.00 38.46 3.85
2029 2159 1.592131 CGGGTCGGACACAAAACGA 60.592 57.895 11.50 0.00 0.00 3.85
2030 2160 1.592131 TCGGGTCGGACACAAAACG 60.592 57.895 11.50 4.98 0.00 3.60
2031 2161 1.501337 GGTCGGGTCGGACACAAAAC 61.501 60.000 11.50 5.21 38.70 2.43
2032 2162 1.227615 GGTCGGGTCGGACACAAAA 60.228 57.895 11.50 0.00 38.70 2.44
2033 2163 2.422591 GGTCGGGTCGGACACAAA 59.577 61.111 11.50 0.00 38.70 2.83
2034 2164 3.618750 GGGTCGGGTCGGACACAA 61.619 66.667 11.50 0.00 40.14 3.33
2036 2166 2.847435 GAATGGGTCGGGTCGGACAC 62.847 65.000 10.76 5.20 40.81 3.67
2037 2167 2.605295 AATGGGTCGGGTCGGACA 60.605 61.111 10.76 0.00 38.70 4.02
2038 2168 2.175035 TTGAATGGGTCGGGTCGGAC 62.175 60.000 0.00 0.00 36.18 4.79
2039 2169 1.481901 TTTGAATGGGTCGGGTCGGA 61.482 55.000 0.00 0.00 0.00 4.55
2040 2170 0.393808 ATTTGAATGGGTCGGGTCGG 60.394 55.000 0.00 0.00 0.00 4.79
2041 2171 0.732571 CATTTGAATGGGTCGGGTCG 59.267 55.000 0.00 0.00 32.78 4.79
2042 2172 0.455815 GCATTTGAATGGGTCGGGTC 59.544 55.000 5.91 0.00 36.90 4.46
2043 2173 0.251564 TGCATTTGAATGGGTCGGGT 60.252 50.000 5.91 0.00 36.90 5.28
2044 2174 0.894141 TTGCATTTGAATGGGTCGGG 59.106 50.000 5.91 0.00 36.90 5.14
2045 2175 2.336667 GTTTGCATTTGAATGGGTCGG 58.663 47.619 5.91 0.00 36.90 4.79
2046 2176 1.984990 CGTTTGCATTTGAATGGGTCG 59.015 47.619 5.91 0.00 36.90 4.79
2047 2177 2.029470 TCCGTTTGCATTTGAATGGGTC 60.029 45.455 7.16 0.00 36.90 4.46
2048 2178 1.967066 TCCGTTTGCATTTGAATGGGT 59.033 42.857 7.16 0.00 36.90 4.51
2049 2179 2.739885 TCCGTTTGCATTTGAATGGG 57.260 45.000 7.16 0.00 36.90 4.00
2050 2180 3.368539 CACATCCGTTTGCATTTGAATGG 59.631 43.478 5.91 1.26 36.90 3.16
2051 2181 3.181528 GCACATCCGTTTGCATTTGAATG 60.182 43.478 0.00 0.00 38.68 2.67
2052 2182 2.995258 GCACATCCGTTTGCATTTGAAT 59.005 40.909 0.00 0.00 38.68 2.57
2053 2183 2.402305 GCACATCCGTTTGCATTTGAA 58.598 42.857 0.00 0.00 38.68 2.69
2054 2184 1.336702 GGCACATCCGTTTGCATTTGA 60.337 47.619 0.00 0.00 40.75 2.69
2055 2185 1.070038 GGCACATCCGTTTGCATTTG 58.930 50.000 0.00 0.00 40.75 2.32
2056 2186 3.512978 GGCACATCCGTTTGCATTT 57.487 47.368 0.00 0.00 40.75 2.32
2110 2240 3.184382 TGTTGAGTGGTGGGAGATAGA 57.816 47.619 0.00 0.00 0.00 1.98
2123 2253 1.465689 GCGTGCGCATTTATGTTGAGT 60.466 47.619 15.91 0.00 41.49 3.41
2125 2255 0.520205 CGCGTGCGCATTTATGTTGA 60.520 50.000 15.91 0.00 42.06 3.18
2194 2324 0.958822 GGTCCACGCCTTCACATTTT 59.041 50.000 0.00 0.00 0.00 1.82
2200 2330 3.998672 GACCGGTCCACGCCTTCA 61.999 66.667 24.75 0.00 42.52 3.02
2205 2335 3.673867 GACTACGACCGGTCCACGC 62.674 68.421 28.52 10.84 42.52 5.34
2219 2349 1.681327 GGAGTGGGAGCGTGGACTA 60.681 63.158 0.00 0.00 0.00 2.59
2243 2373 3.431725 GTTTCAAGGAGGCCGCGG 61.432 66.667 24.05 24.05 0.00 6.46
2255 2385 0.752376 GGTTTGGGTGTCGGGTTTCA 60.752 55.000 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.