Multiple sequence alignment - TraesCS7D01G332000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G332000 chr7D 100.000 2468 0 0 1 2468 423550439 423552906 0.000000e+00 4558
1 TraesCS7D01G332000 chr7D 88.997 309 31 3 2094 2400 53375836 53375529 1.790000e-101 379
2 TraesCS7D01G332000 chr7D 88.112 286 31 2 1187 1469 423711206 423711491 1.090000e-88 337
3 TraesCS7D01G332000 chr7D 89.683 252 26 0 1187 1438 423709542 423709793 3.060000e-84 322
4 TraesCS7D01G332000 chr7D 86.505 289 34 4 1187 1471 423642188 423642475 1.840000e-81 313
5 TraesCS7D01G332000 chr7A 87.199 1867 153 48 256 2102 509651983 509650183 0.000000e+00 2045
6 TraesCS7D01G332000 chr7A 90.476 252 24 0 1187 1438 509469076 509468825 1.410000e-87 333
7 TraesCS7D01G332000 chr7A 87.586 290 31 3 1187 1472 509526603 509526315 5.090000e-87 331
8 TraesCS7D01G332000 chr7B 89.332 1453 107 26 251 1685 440331431 440332853 0.000000e+00 1781
9 TraesCS7D01G332000 chr7B 90.461 304 24 5 2098 2399 743630552 743630852 1.780000e-106 396
10 TraesCS7D01G332000 chr7B 90.873 252 23 0 1187 1438 440814134 440814385 3.040000e-89 339
11 TraesCS7D01G332000 chr7B 89.922 258 23 3 1216 1470 440187499 440187756 1.830000e-86 329
12 TraesCS7D01G332000 chr2A 91.391 302 19 7 2101 2399 726976878 726976581 8.220000e-110 407
13 TraesCS7D01G332000 chr2A 88.953 172 18 1 1 172 180111834 180112004 6.910000e-51 211
14 TraesCS7D01G332000 chr2A 84.242 165 22 3 1 163 528752971 528753133 9.140000e-35 158
15 TraesCS7D01G332000 chr6A 90.759 303 23 5 2099 2399 146483489 146483190 1.370000e-107 399
16 TraesCS7D01G332000 chr1A 88.000 300 22 7 2101 2399 489448360 489448074 2.350000e-90 342
17 TraesCS7D01G332000 chr3D 88.442 199 23 0 1 199 554578677 554578479 8.820000e-60 241
18 TraesCS7D01G332000 chr3D 87.374 198 24 1 1 198 563456790 563456986 2.470000e-55 226
19 TraesCS7D01G332000 chr4A 90.116 172 16 1 1 172 629350317 629350487 3.190000e-54 222
20 TraesCS7D01G332000 chr5D 88.304 171 19 1 1 171 290049945 290049776 1.160000e-48 204
21 TraesCS7D01G332000 chr2B 84.615 169 26 0 1 169 358670447 358670279 4.220000e-38 169
22 TraesCS7D01G332000 chr5B 84.756 164 18 7 4 163 513731109 513730949 9.140000e-35 158
23 TraesCS7D01G332000 chr3B 82.759 174 27 3 2096 2268 13146657 13146828 4.250000e-33 152
24 TraesCS7D01G332000 chr3B 81.006 179 26 8 2098 2271 805234684 805234509 4.280000e-28 135
25 TraesCS7D01G332000 chr4B 82.386 176 27 4 2 175 459007202 459007029 1.530000e-32 150
26 TraesCS7D01G332000 chr2D 82.822 163 25 3 2093 2253 427340275 427340436 2.560000e-30 143
27 TraesCS7D01G332000 chr1D 81.395 172 31 1 2096 2266 470518334 470518163 3.310000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G332000 chr7D 423550439 423552906 2467 False 4558.0 4558 100.0000 1 2468 1 chr7D.!!$F1 2467
1 TraesCS7D01G332000 chr7D 423709542 423711491 1949 False 329.5 337 88.8975 1187 1469 2 chr7D.!!$F3 282
2 TraesCS7D01G332000 chr7A 509650183 509651983 1800 True 2045.0 2045 87.1990 256 2102 1 chr7A.!!$R3 1846
3 TraesCS7D01G332000 chr7B 440331431 440332853 1422 False 1781.0 1781 89.3320 251 1685 1 chr7B.!!$F2 1434

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
907 917 0.106268 TGGCTTCTTGCTGGTTTCCA 60.106 50.0 0.0 0.0 42.39 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1908 3600 0.036105 AGACATTGATGACTGCGGCA 60.036 50.0 1.29 1.29 31.88 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.831664 AAACATATCAACAGGGGATCTACT 57.168 37.500 0.00 0.00 0.00 2.57
24 25 6.831664 AACATATCAACAGGGGATCTACTT 57.168 37.500 0.00 0.00 0.00 2.24
25 26 6.831664 ACATATCAACAGGGGATCTACTTT 57.168 37.500 0.00 0.00 0.00 2.66
26 27 6.831976 ACATATCAACAGGGGATCTACTTTC 58.168 40.000 0.00 0.00 0.00 2.62
27 28 3.887621 TCAACAGGGGATCTACTTTCG 57.112 47.619 0.00 0.00 0.00 3.46
28 29 3.437213 TCAACAGGGGATCTACTTTCGA 58.563 45.455 0.00 0.00 0.00 3.71
29 30 3.447586 TCAACAGGGGATCTACTTTCGAG 59.552 47.826 0.00 0.00 0.00 4.04
30 31 2.389715 ACAGGGGATCTACTTTCGAGG 58.610 52.381 0.00 0.00 0.00 4.63
31 32 2.024273 ACAGGGGATCTACTTTCGAGGA 60.024 50.000 0.00 0.00 0.00 3.71
32 33 3.235200 CAGGGGATCTACTTTCGAGGAT 58.765 50.000 0.00 0.00 0.00 3.24
33 34 3.257127 CAGGGGATCTACTTTCGAGGATC 59.743 52.174 0.00 0.00 35.28 3.36
34 35 3.141272 AGGGGATCTACTTTCGAGGATCT 59.859 47.826 0.00 0.00 36.02 2.75
35 36 3.508402 GGGGATCTACTTTCGAGGATCTC 59.492 52.174 0.00 0.00 35.60 2.75
45 46 2.635079 GAGGATCTCGCCTCGATGA 58.365 57.895 0.00 0.00 44.52 2.92
46 47 0.955178 GAGGATCTCGCCTCGATGAA 59.045 55.000 0.00 0.00 44.52 2.57
47 48 1.543802 GAGGATCTCGCCTCGATGAAT 59.456 52.381 0.00 0.00 44.52 2.57
48 49 1.543802 AGGATCTCGCCTCGATGAATC 59.456 52.381 0.00 0.00 34.61 2.52
49 50 1.543802 GGATCTCGCCTCGATGAATCT 59.456 52.381 0.00 0.00 34.61 2.40
50 51 2.029470 GGATCTCGCCTCGATGAATCTT 60.029 50.000 0.00 0.00 34.61 2.40
51 52 3.553922 GGATCTCGCCTCGATGAATCTTT 60.554 47.826 0.00 0.00 34.61 2.52
52 53 3.526931 TCTCGCCTCGATGAATCTTTT 57.473 42.857 0.00 0.00 34.61 2.27
53 54 4.649088 TCTCGCCTCGATGAATCTTTTA 57.351 40.909 0.00 0.00 34.61 1.52
54 55 5.201713 TCTCGCCTCGATGAATCTTTTAT 57.798 39.130 0.00 0.00 34.61 1.40
55 56 4.984785 TCTCGCCTCGATGAATCTTTTATG 59.015 41.667 0.00 0.00 34.61 1.90
56 57 4.693283 TCGCCTCGATGAATCTTTTATGT 58.307 39.130 0.00 0.00 0.00 2.29
57 58 4.507756 TCGCCTCGATGAATCTTTTATGTG 59.492 41.667 0.00 0.00 0.00 3.21
58 59 4.507756 CGCCTCGATGAATCTTTTATGTGA 59.492 41.667 0.00 0.00 0.00 3.58
59 60 5.006649 CGCCTCGATGAATCTTTTATGTGAA 59.993 40.000 0.00 0.00 0.00 3.18
60 61 6.456853 CGCCTCGATGAATCTTTTATGTGAAA 60.457 38.462 0.00 0.00 0.00 2.69
61 62 7.250569 GCCTCGATGAATCTTTTATGTGAAAA 58.749 34.615 0.00 0.00 0.00 2.29
62 63 7.218963 GCCTCGATGAATCTTTTATGTGAAAAC 59.781 37.037 0.00 0.00 0.00 2.43
63 64 8.236586 CCTCGATGAATCTTTTATGTGAAAACA 58.763 33.333 0.00 0.00 0.00 2.83
64 65 9.270576 CTCGATGAATCTTTTATGTGAAAACAG 57.729 33.333 0.00 0.00 0.00 3.16
65 66 8.783093 TCGATGAATCTTTTATGTGAAAACAGT 58.217 29.630 0.00 0.00 0.00 3.55
66 67 9.398170 CGATGAATCTTTTATGTGAAAACAGTT 57.602 29.630 0.00 0.00 0.00 3.16
79 80 5.561199 GAAAACAGTTTTTCAATCGGAGC 57.439 39.130 12.62 0.00 46.84 4.70
80 81 2.969443 ACAGTTTTTCAATCGGAGCG 57.031 45.000 0.00 0.00 0.00 5.03
81 82 2.489971 ACAGTTTTTCAATCGGAGCGA 58.510 42.857 0.00 0.00 41.13 4.93
82 83 2.223377 ACAGTTTTTCAATCGGAGCGAC 59.777 45.455 0.00 0.00 39.18 5.19
83 84 1.459592 AGTTTTTCAATCGGAGCGACG 59.540 47.619 0.00 0.00 39.18 5.12
84 85 0.793861 TTTTTCAATCGGAGCGACGG 59.206 50.000 0.00 0.00 39.18 4.79
85 86 0.320073 TTTTCAATCGGAGCGACGGT 60.320 50.000 0.00 0.00 39.18 4.83
86 87 0.320073 TTTCAATCGGAGCGACGGTT 60.320 50.000 0.00 0.00 39.18 4.44
87 88 0.320073 TTCAATCGGAGCGACGGTTT 60.320 50.000 0.00 0.00 39.18 3.27
88 89 1.011968 TCAATCGGAGCGACGGTTTG 61.012 55.000 0.00 1.74 39.18 2.93
89 90 1.005394 AATCGGAGCGACGGTTTGT 60.005 52.632 0.00 0.00 39.18 2.83
90 91 1.289109 AATCGGAGCGACGGTTTGTG 61.289 55.000 0.00 0.00 39.18 3.33
91 92 4.072088 CGGAGCGACGGTTTGTGC 62.072 66.667 0.00 0.00 0.00 4.57
92 93 2.665185 GGAGCGACGGTTTGTGCT 60.665 61.111 0.00 0.00 37.56 4.40
93 94 1.373748 GGAGCGACGGTTTGTGCTA 60.374 57.895 0.00 0.00 35.84 3.49
94 95 1.623973 GGAGCGACGGTTTGTGCTAC 61.624 60.000 0.00 0.00 35.84 3.58
95 96 0.942410 GAGCGACGGTTTGTGCTACA 60.942 55.000 0.00 0.00 35.84 2.74
96 97 0.531090 AGCGACGGTTTGTGCTACAA 60.531 50.000 0.00 0.00 36.11 2.41
97 98 0.305313 GCGACGGTTTGTGCTACAAA 59.695 50.000 9.46 9.46 44.91 2.83
163 164 9.669353 GTCAGTAATTTTGTTCTATATGCATGG 57.331 33.333 10.16 0.00 0.00 3.66
164 165 9.407380 TCAGTAATTTTGTTCTATATGCATGGT 57.593 29.630 10.16 0.04 0.00 3.55
192 193 6.915544 TGATTTCATGAGATTGACTAGTGC 57.084 37.500 0.00 0.00 0.00 4.40
193 194 6.408869 TGATTTCATGAGATTGACTAGTGCA 58.591 36.000 0.00 0.00 0.00 4.57
194 195 6.880529 TGATTTCATGAGATTGACTAGTGCAA 59.119 34.615 0.00 5.15 0.00 4.08
195 196 7.391275 TGATTTCATGAGATTGACTAGTGCAAA 59.609 33.333 0.00 0.00 0.00 3.68
196 197 7.692460 TTTCATGAGATTGACTAGTGCAAAT 57.308 32.000 0.00 0.00 0.00 2.32
197 198 8.791327 TTTCATGAGATTGACTAGTGCAAATA 57.209 30.769 0.00 0.00 0.00 1.40
198 199 7.776933 TCATGAGATTGACTAGTGCAAATAC 57.223 36.000 0.00 2.12 0.00 1.89
199 200 7.559486 TCATGAGATTGACTAGTGCAAATACT 58.441 34.615 0.00 6.36 34.71 2.12
200 201 8.043113 TCATGAGATTGACTAGTGCAAATACTT 58.957 33.333 0.00 0.00 32.19 2.24
201 202 8.671921 CATGAGATTGACTAGTGCAAATACTTT 58.328 33.333 0.00 0.00 32.19 2.66
202 203 8.032952 TGAGATTGACTAGTGCAAATACTTTG 57.967 34.615 0.00 0.00 43.44 2.77
203 204 7.661437 TGAGATTGACTAGTGCAAATACTTTGT 59.339 33.333 0.00 0.00 42.56 2.83
204 205 8.396272 AGATTGACTAGTGCAAATACTTTGTT 57.604 30.769 0.00 0.00 42.56 2.83
205 206 8.850156 AGATTGACTAGTGCAAATACTTTGTTT 58.150 29.630 0.00 0.00 42.56 2.83
206 207 8.801715 ATTGACTAGTGCAAATACTTTGTTTG 57.198 30.769 0.00 0.00 42.56 2.93
207 208 6.734137 TGACTAGTGCAAATACTTTGTTTGG 58.266 36.000 0.00 0.00 42.56 3.28
208 209 6.544197 TGACTAGTGCAAATACTTTGTTTGGA 59.456 34.615 0.00 0.00 42.56 3.53
209 210 7.230510 TGACTAGTGCAAATACTTTGTTTGGAT 59.769 33.333 0.00 0.00 42.56 3.41
210 211 7.593825 ACTAGTGCAAATACTTTGTTTGGATC 58.406 34.615 0.00 0.00 42.56 3.36
211 212 6.655078 AGTGCAAATACTTTGTTTGGATCT 57.345 33.333 0.00 0.00 42.56 2.75
212 213 6.449698 AGTGCAAATACTTTGTTTGGATCTG 58.550 36.000 0.00 0.00 42.56 2.90
213 214 6.040842 AGTGCAAATACTTTGTTTGGATCTGT 59.959 34.615 0.00 0.00 42.56 3.41
214 215 6.701400 GTGCAAATACTTTGTTTGGATCTGTT 59.299 34.615 0.00 0.00 42.56 3.16
215 216 6.700960 TGCAAATACTTTGTTTGGATCTGTTG 59.299 34.615 0.00 0.00 42.56 3.33
216 217 6.346838 GCAAATACTTTGTTTGGATCTGTTGC 60.347 38.462 0.00 0.00 42.56 4.17
217 218 6.655078 AATACTTTGTTTGGATCTGTTGCT 57.345 33.333 0.00 0.00 0.00 3.91
218 219 7.759489 AATACTTTGTTTGGATCTGTTGCTA 57.241 32.000 0.00 0.00 0.00 3.49
219 220 7.759489 ATACTTTGTTTGGATCTGTTGCTAA 57.241 32.000 0.00 0.00 0.00 3.09
220 221 6.463995 ACTTTGTTTGGATCTGTTGCTAAA 57.536 33.333 0.00 0.00 0.00 1.85
221 222 7.054491 ACTTTGTTTGGATCTGTTGCTAAAT 57.946 32.000 0.00 0.00 0.00 1.40
222 223 7.500141 ACTTTGTTTGGATCTGTTGCTAAATT 58.500 30.769 0.00 0.00 0.00 1.82
223 224 7.986889 ACTTTGTTTGGATCTGTTGCTAAATTT 59.013 29.630 0.00 0.00 0.00 1.82
224 225 7.945033 TTGTTTGGATCTGTTGCTAAATTTC 57.055 32.000 0.00 0.00 0.00 2.17
225 226 6.148948 TGTTTGGATCTGTTGCTAAATTTCG 58.851 36.000 0.00 0.00 0.00 3.46
226 227 5.957842 TTGGATCTGTTGCTAAATTTCGT 57.042 34.783 0.00 0.00 0.00 3.85
227 228 7.041030 TGTTTGGATCTGTTGCTAAATTTCGTA 60.041 33.333 0.00 0.00 0.00 3.43
228 229 6.417191 TGGATCTGTTGCTAAATTTCGTAC 57.583 37.500 0.00 0.00 0.00 3.67
229 230 5.062934 TGGATCTGTTGCTAAATTTCGTACG 59.937 40.000 9.53 9.53 0.00 3.67
230 231 5.063060 GGATCTGTTGCTAAATTTCGTACGT 59.937 40.000 16.05 0.00 0.00 3.57
231 232 5.505165 TCTGTTGCTAAATTTCGTACGTC 57.495 39.130 16.05 0.00 0.00 4.34
232 233 4.386652 TCTGTTGCTAAATTTCGTACGTCC 59.613 41.667 16.05 0.00 0.00 4.79
233 234 3.121611 TGTTGCTAAATTTCGTACGTCCG 59.878 43.478 16.05 0.00 0.00 4.79
234 235 3.214697 TGCTAAATTTCGTACGTCCGA 57.785 42.857 16.05 0.00 34.52 4.55
235 236 3.573598 TGCTAAATTTCGTACGTCCGAA 58.426 40.909 12.20 12.20 44.43 4.30
242 243 2.247311 TCGTACGTCCGAAAGTTAGC 57.753 50.000 16.05 0.00 33.15 3.09
243 244 1.535028 TCGTACGTCCGAAAGTTAGCA 59.465 47.619 16.05 0.00 33.15 3.49
244 245 1.645751 CGTACGTCCGAAAGTTAGCAC 59.354 52.381 7.22 0.00 0.00 4.40
245 246 2.664916 GTACGTCCGAAAGTTAGCACA 58.335 47.619 0.00 0.00 0.00 4.57
246 247 2.228138 ACGTCCGAAAGTTAGCACAA 57.772 45.000 0.00 0.00 0.00 3.33
247 248 2.762745 ACGTCCGAAAGTTAGCACAAT 58.237 42.857 0.00 0.00 0.00 2.71
248 249 2.735134 ACGTCCGAAAGTTAGCACAATC 59.265 45.455 0.00 0.00 0.00 2.67
249 250 2.093783 CGTCCGAAAGTTAGCACAATCC 59.906 50.000 0.00 0.00 0.00 3.01
252 253 4.156008 GTCCGAAAGTTAGCACAATCCAAT 59.844 41.667 0.00 0.00 0.00 3.16
267 268 9.305925 GCACAATCCAATAGAAAAAGGAAATAG 57.694 33.333 0.00 0.00 33.17 1.73
355 359 2.297701 GAAAGTGTTGTTCTGCTCCCA 58.702 47.619 0.00 0.00 0.00 4.37
389 393 5.571741 GCATCTGAGATGAACAACACATTTG 59.428 40.000 25.58 0.00 0.00 2.32
394 398 6.272318 TGAGATGAACAACACATTTGGAAAC 58.728 36.000 0.00 0.00 0.00 2.78
468 474 8.442632 TTTTTCATGATTTTACCAAACATGCA 57.557 26.923 0.00 0.00 34.61 3.96
575 582 4.747605 ACATCGGTTTTGTTTTATTGCCAC 59.252 37.500 0.00 0.00 0.00 5.01
576 583 4.386867 TCGGTTTTGTTTTATTGCCACA 57.613 36.364 0.00 0.00 0.00 4.17
609 616 2.242047 TTGTTCACCACGAAATCCGA 57.758 45.000 0.00 0.00 41.76 4.55
632 639 8.405531 CCGACATCCTAATAAAACATTCAACAT 58.594 33.333 0.00 0.00 0.00 2.71
771 781 0.538516 CATTCCCACGAACAACCCCA 60.539 55.000 0.00 0.00 0.00 4.96
833 843 2.049228 CGTCGCTAACTTTGTCTTCGT 58.951 47.619 0.00 0.00 0.00 3.85
838 848 3.057350 CGCTAACTTTGTCTTCGTCGTAC 59.943 47.826 0.00 0.00 0.00 3.67
900 910 1.170919 ACAGTGCTGGCTTCTTGCTG 61.171 55.000 4.11 0.00 42.39 4.41
907 917 0.106268 TGGCTTCTTGCTGGTTTCCA 60.106 50.000 0.00 0.00 42.39 3.53
911 921 2.560105 GCTTCTTGCTGGTTTCCATTCT 59.440 45.455 0.00 0.00 38.95 2.40
914 924 1.470098 CTTGCTGGTTTCCATTCTCCG 59.530 52.381 0.00 0.00 30.82 4.63
930 940 1.403679 CTCCGACGCAGAATTCTCTCT 59.596 52.381 4.57 0.00 0.00 3.10
932 942 1.135257 CCGACGCAGAATTCTCTCTGT 60.135 52.381 4.57 1.57 44.04 3.41
937 947 5.238006 ACGCAGAATTCTCTCTGTAGTAC 57.762 43.478 4.57 0.00 44.04 2.73
968 978 4.565962 TGTTACACAATGCAGCAAAAACAG 59.434 37.500 0.00 0.00 0.00 3.16
1128 1138 3.535561 CTGCAAGGGATATCGAAACAGT 58.464 45.455 0.00 0.00 0.00 3.55
1194 1204 2.214347 CTCCGAGATCTACAGCTTCGA 58.786 52.381 0.00 0.00 0.00 3.71
1249 2923 3.475774 CGTTCACGTACAGCGGGC 61.476 66.667 0.00 0.00 45.10 6.13
1365 3039 2.436646 GCGTGCCTGCACCTGTAT 60.437 61.111 16.06 0.00 43.49 2.29
1503 3183 1.007038 GTGAGGGACGTGCGTACAA 60.007 57.895 9.28 0.00 0.00 2.41
1558 3240 3.003480 GGCGTCAGCTCAGTTTAGAAAT 58.997 45.455 0.00 0.00 44.37 2.17
1561 3243 4.201666 GCGTCAGCTCAGTTTAGAAATCAG 60.202 45.833 0.00 0.00 41.01 2.90
1565 3247 6.090628 GTCAGCTCAGTTTAGAAATCAGACAG 59.909 42.308 0.00 0.00 0.00 3.51
1580 3264 1.210478 AGACAGGGCAGCGATGTAAAT 59.790 47.619 1.22 0.00 0.00 1.40
1624 3312 0.462581 CTGATGGACACCGTGATGGG 60.463 60.000 5.28 0.00 44.64 4.00
1650 3339 5.721876 TTTTTCTGTATCGTTGTGTCGTT 57.278 34.783 0.00 0.00 0.00 3.85
1651 3340 4.702247 TTTCTGTATCGTTGTGTCGTTG 57.298 40.909 0.00 0.00 0.00 4.10
1652 3341 2.055838 TCTGTATCGTTGTGTCGTTGC 58.944 47.619 0.00 0.00 0.00 4.17
1653 3342 1.126113 CTGTATCGTTGTGTCGTTGCC 59.874 52.381 0.00 0.00 0.00 4.52
1687 3378 6.426328 CCTAAAAGGATTTCGATCTGGATCTG 59.574 42.308 8.65 3.46 37.28 2.90
1711 3402 9.166173 CTGAATGTCCATTTTGTAGAGTTCATA 57.834 33.333 0.00 0.00 0.00 2.15
1720 3411 8.567948 CATTTTGTAGAGTTCATACACAGGTTT 58.432 33.333 0.00 0.00 33.01 3.27
1722 3413 6.169557 TGTAGAGTTCATACACAGGTTTGT 57.830 37.500 0.00 0.00 38.31 2.83
1735 3426 5.705609 ACAGGTTTGTGTAAATCCATCAC 57.294 39.130 0.00 0.00 35.83 3.06
1737 3428 6.539173 ACAGGTTTGTGTAAATCCATCACTA 58.461 36.000 0.00 0.00 35.83 2.74
1739 3430 5.642063 AGGTTTGTGTAAATCCATCACTACG 59.358 40.000 0.00 0.00 33.82 3.51
1740 3431 5.640357 GGTTTGTGTAAATCCATCACTACGA 59.360 40.000 0.00 0.00 33.82 3.43
1745 3436 6.367695 TGTGTAAATCCATCACTACGAAACAG 59.632 38.462 0.00 0.00 33.82 3.16
1752 3443 4.929211 CCATCACTACGAAACAGTCATTCA 59.071 41.667 0.00 0.00 0.00 2.57
1753 3444 5.163953 CCATCACTACGAAACAGTCATTCAC 60.164 44.000 0.00 0.00 0.00 3.18
1757 3448 2.404215 ACGAAACAGTCATTCACCTCG 58.596 47.619 0.00 0.00 0.00 4.63
1761 3452 2.550830 ACAGTCATTCACCTCGCTTT 57.449 45.000 0.00 0.00 0.00 3.51
1763 3454 4.207891 ACAGTCATTCACCTCGCTTTAT 57.792 40.909 0.00 0.00 0.00 1.40
1765 3456 5.730550 ACAGTCATTCACCTCGCTTTATAA 58.269 37.500 0.00 0.00 0.00 0.98
1780 3472 8.057536 TCGCTTTATAAATAAACAACCACCAT 57.942 30.769 0.00 0.00 0.00 3.55
1845 3537 3.693578 TGAGACAACAAGACAAACATGCA 59.306 39.130 0.00 0.00 0.00 3.96
1860 3552 9.243637 GACAAACATGCACAACTATAAAGAAAA 57.756 29.630 0.00 0.00 0.00 2.29
1871 3563 8.576442 ACAACTATAAAGAAAAACATGAGTGGG 58.424 33.333 0.00 0.00 0.00 4.61
1880 3572 1.153369 CATGAGTGGGTAGGTGGCG 60.153 63.158 0.00 0.00 0.00 5.69
1938 3630 4.987285 GTCATCAATGTCTATCATGTCGCT 59.013 41.667 0.00 0.00 36.81 4.93
1953 3645 2.288579 TGTCGCTTAACCGATCACAGTT 60.289 45.455 0.00 0.00 39.67 3.16
1956 3648 2.695359 GCTTAACCGATCACAGTTCCA 58.305 47.619 0.00 0.00 0.00 3.53
1990 3682 2.565210 TGTGACAGTGCTGCAAAAAG 57.435 45.000 2.77 0.00 0.00 2.27
1991 3683 2.090760 TGTGACAGTGCTGCAAAAAGA 58.909 42.857 2.77 0.00 0.00 2.52
1993 3685 2.098117 GTGACAGTGCTGCAAAAAGACT 59.902 45.455 2.77 0.00 0.00 3.24
2014 3706 9.661954 AAGACTAGGAATTTGGATATAGAGTCA 57.338 33.333 0.00 0.00 33.61 3.41
2047 3739 3.452474 CAAGAAGACTCCCTCAATAGCG 58.548 50.000 0.00 0.00 0.00 4.26
2059 3751 5.773176 TCCCTCAATAGCGATCTTGTATGTA 59.227 40.000 0.00 0.00 0.00 2.29
2060 3752 6.437477 TCCCTCAATAGCGATCTTGTATGTAT 59.563 38.462 0.00 0.00 0.00 2.29
2061 3753 6.533012 CCCTCAATAGCGATCTTGTATGTATG 59.467 42.308 0.00 0.00 0.00 2.39
2062 3754 7.093354 CCTCAATAGCGATCTTGTATGTATGT 58.907 38.462 0.00 0.00 0.00 2.29
2065 3757 7.926018 TCAATAGCGATCTTGTATGTATGTGTT 59.074 33.333 0.00 0.00 0.00 3.32
2078 3770 3.823873 TGTATGTGTTGTCCAAATGGTCC 59.176 43.478 0.00 0.00 36.34 4.46
2095 3787 2.271800 GTCCAGGTCATCGTCATGAAC 58.728 52.381 0.00 0.00 46.03 3.18
2102 3794 3.865745 GGTCATCGTCATGAACACTAAGG 59.134 47.826 0.00 0.00 45.13 2.69
2103 3795 3.865745 GTCATCGTCATGAACACTAAGGG 59.134 47.826 0.00 0.00 40.90 3.95
2104 3796 3.513912 TCATCGTCATGAACACTAAGGGT 59.486 43.478 0.00 0.00 35.99 4.34
2105 3797 3.618594 CATCGTCATGAACACTAAGGGTG 59.381 47.826 0.00 0.00 40.93 4.61
2115 3807 3.982576 CACTAAGGGTGTGTTTGGTTC 57.017 47.619 0.00 0.00 40.79 3.62
2116 3808 2.289547 CACTAAGGGTGTGTTTGGTTCG 59.710 50.000 0.00 0.00 40.79 3.95
2117 3809 1.877443 CTAAGGGTGTGTTTGGTTCGG 59.123 52.381 0.00 0.00 0.00 4.30
2118 3810 0.256464 AAGGGTGTGTTTGGTTCGGA 59.744 50.000 0.00 0.00 0.00 4.55
2119 3811 0.256464 AGGGTGTGTTTGGTTCGGAA 59.744 50.000 0.00 0.00 0.00 4.30
2120 3812 1.104630 GGGTGTGTTTGGTTCGGAAA 58.895 50.000 0.00 0.00 0.00 3.13
2121 3813 1.202325 GGGTGTGTTTGGTTCGGAAAC 60.202 52.381 0.00 0.00 34.48 2.78
2138 3830 5.121221 GGAAACGAAGTGAAATGGAATGT 57.879 39.130 0.00 0.00 45.00 2.71
2139 3831 5.154222 GGAAACGAAGTGAAATGGAATGTC 58.846 41.667 0.00 0.00 45.00 3.06
2140 3832 5.278266 GGAAACGAAGTGAAATGGAATGTCA 60.278 40.000 0.00 0.00 45.00 3.58
2141 3833 5.964958 AACGAAGTGAAATGGAATGTCAT 57.035 34.783 0.00 0.00 43.73 3.06
2142 3834 5.300969 ACGAAGTGAAATGGAATGTCATG 57.699 39.130 0.00 0.00 43.73 3.07
2143 3835 5.003160 ACGAAGTGAAATGGAATGTCATGA 58.997 37.500 0.00 0.00 43.73 3.07
2144 3836 5.649395 ACGAAGTGAAATGGAATGTCATGAT 59.351 36.000 0.00 0.00 43.73 2.45
2145 3837 6.151648 ACGAAGTGAAATGGAATGTCATGATT 59.848 34.615 0.00 0.00 43.73 2.57
2146 3838 6.690098 CGAAGTGAAATGGAATGTCATGATTC 59.310 38.462 0.00 0.00 43.73 2.52
2147 3839 6.461110 AGTGAAATGGAATGTCATGATTCC 57.539 37.500 17.74 17.74 43.73 3.01
2157 3849 7.199541 GAATGTCATGATTCCATTCCACTAG 57.800 40.000 19.57 0.00 38.87 2.57
2158 3850 5.955961 TGTCATGATTCCATTCCACTAGA 57.044 39.130 0.00 0.00 0.00 2.43
2159 3851 6.312141 TGTCATGATTCCATTCCACTAGAA 57.688 37.500 0.00 0.00 39.32 2.10
2160 3852 6.903516 TGTCATGATTCCATTCCACTAGAAT 58.096 36.000 0.00 0.00 46.54 2.40
2168 3860 1.946984 TTCCACTAGAATGGGTCGGT 58.053 50.000 0.00 0.00 40.49 4.69
2169 3861 1.946984 TCCACTAGAATGGGTCGGTT 58.053 50.000 0.00 0.00 40.49 4.44
2170 3862 1.829222 TCCACTAGAATGGGTCGGTTC 59.171 52.381 0.00 0.00 40.49 3.62
2171 3863 1.470979 CCACTAGAATGGGTCGGTTCG 60.471 57.143 0.00 0.00 35.95 3.95
2172 3864 1.203994 CACTAGAATGGGTCGGTTCGT 59.796 52.381 0.00 0.00 0.00 3.85
2173 3865 1.475682 ACTAGAATGGGTCGGTTCGTC 59.524 52.381 0.00 0.00 0.00 4.20
2174 3866 1.749634 CTAGAATGGGTCGGTTCGTCT 59.250 52.381 0.00 0.00 0.00 4.18
2175 3867 0.974383 AGAATGGGTCGGTTCGTCTT 59.026 50.000 0.00 0.00 0.00 3.01
2176 3868 1.346722 AGAATGGGTCGGTTCGTCTTT 59.653 47.619 0.00 0.00 0.00 2.52
2177 3869 2.564062 AGAATGGGTCGGTTCGTCTTTA 59.436 45.455 0.00 0.00 0.00 1.85
2178 3870 2.375173 ATGGGTCGGTTCGTCTTTAC 57.625 50.000 0.00 0.00 0.00 2.01
2193 3885 6.515043 CGTCTTTACGTTTGGTAGAAGAAA 57.485 37.500 0.00 0.00 44.21 2.52
2194 3886 7.113704 CGTCTTTACGTTTGGTAGAAGAAAT 57.886 36.000 0.00 0.00 44.21 2.17
2195 3887 7.570161 CGTCTTTACGTTTGGTAGAAGAAATT 58.430 34.615 0.00 0.00 44.21 1.82
2196 3888 7.739043 CGTCTTTACGTTTGGTAGAAGAAATTC 59.261 37.037 0.00 0.00 44.21 2.17
2197 3889 8.553696 GTCTTTACGTTTGGTAGAAGAAATTCA 58.446 33.333 0.00 0.00 33.80 2.57
2198 3890 8.770828 TCTTTACGTTTGGTAGAAGAAATTCAG 58.229 33.333 0.00 0.00 31.42 3.02
2199 3891 8.665643 TTTACGTTTGGTAGAAGAAATTCAGA 57.334 30.769 0.00 0.00 31.46 3.27
2200 3892 6.787085 ACGTTTGGTAGAAGAAATTCAGAG 57.213 37.500 0.00 0.00 0.00 3.35
2201 3893 5.701290 ACGTTTGGTAGAAGAAATTCAGAGG 59.299 40.000 0.00 0.00 0.00 3.69
2202 3894 5.932303 CGTTTGGTAGAAGAAATTCAGAGGA 59.068 40.000 0.00 0.00 0.00 3.71
2203 3895 6.426937 CGTTTGGTAGAAGAAATTCAGAGGAA 59.573 38.462 0.00 0.00 37.45 3.36
2204 3896 7.119846 CGTTTGGTAGAAGAAATTCAGAGGAAT 59.880 37.037 0.00 0.00 45.57 3.01
2205 3897 7.928307 TTGGTAGAAGAAATTCAGAGGAATG 57.072 36.000 0.00 0.00 42.87 2.67
2206 3898 6.418101 TGGTAGAAGAAATTCAGAGGAATGG 58.582 40.000 0.00 0.00 42.87 3.16
2207 3899 6.215431 TGGTAGAAGAAATTCAGAGGAATGGA 59.785 38.462 0.00 0.00 42.87 3.41
2208 3900 7.112779 GGTAGAAGAAATTCAGAGGAATGGAA 58.887 38.462 0.00 0.00 42.87 3.53
2209 3901 7.777440 GGTAGAAGAAATTCAGAGGAATGGAAT 59.223 37.037 0.00 0.00 42.87 3.01
2210 3902 7.642082 AGAAGAAATTCAGAGGAATGGAATG 57.358 36.000 0.00 0.00 42.87 2.67
2211 3903 6.606395 AGAAGAAATTCAGAGGAATGGAATGG 59.394 38.462 0.00 0.00 42.87 3.16
2212 3904 6.083487 AGAAATTCAGAGGAATGGAATGGA 57.917 37.500 0.00 0.00 42.87 3.41
2213 3905 6.680540 AGAAATTCAGAGGAATGGAATGGAT 58.319 36.000 0.00 0.00 42.87 3.41
2214 3906 7.819500 AGAAATTCAGAGGAATGGAATGGATA 58.180 34.615 0.00 0.00 42.87 2.59
2215 3907 7.723172 AGAAATTCAGAGGAATGGAATGGATAC 59.277 37.037 0.00 0.00 42.87 2.24
2230 3922 3.850752 TGGATACATTTGGGTGTTTGGT 58.149 40.909 0.00 0.00 46.17 3.67
2231 3923 4.227197 TGGATACATTTGGGTGTTTGGTT 58.773 39.130 0.00 0.00 46.17 3.67
2232 3924 4.656112 TGGATACATTTGGGTGTTTGGTTT 59.344 37.500 0.00 0.00 46.17 3.27
2233 3925 5.131142 TGGATACATTTGGGTGTTTGGTTTT 59.869 36.000 0.00 0.00 46.17 2.43
2234 3926 6.058833 GGATACATTTGGGTGTTTGGTTTTT 58.941 36.000 0.00 0.00 33.62 1.94
2235 3927 6.017523 GGATACATTTGGGTGTTTGGTTTTTG 60.018 38.462 0.00 0.00 33.62 2.44
2236 3928 4.911390 ACATTTGGGTGTTTGGTTTTTGA 58.089 34.783 0.00 0.00 0.00 2.69
2237 3929 4.940654 ACATTTGGGTGTTTGGTTTTTGAG 59.059 37.500 0.00 0.00 0.00 3.02
2238 3930 4.891992 TTTGGGTGTTTGGTTTTTGAGA 57.108 36.364 0.00 0.00 0.00 3.27
2239 3931 5.428184 TTTGGGTGTTTGGTTTTTGAGAT 57.572 34.783 0.00 0.00 0.00 2.75
2240 3932 4.399004 TGGGTGTTTGGTTTTTGAGATG 57.601 40.909 0.00 0.00 0.00 2.90
2241 3933 3.133721 TGGGTGTTTGGTTTTTGAGATGG 59.866 43.478 0.00 0.00 0.00 3.51
2242 3934 3.494223 GGGTGTTTGGTTTTTGAGATGGG 60.494 47.826 0.00 0.00 0.00 4.00
2243 3935 3.386402 GGTGTTTGGTTTTTGAGATGGGA 59.614 43.478 0.00 0.00 0.00 4.37
2244 3936 4.368315 GTGTTTGGTTTTTGAGATGGGAC 58.632 43.478 0.00 0.00 0.00 4.46
2245 3937 3.067461 TGTTTGGTTTTTGAGATGGGACG 59.933 43.478 0.00 0.00 0.00 4.79
2246 3938 1.904287 TGGTTTTTGAGATGGGACGG 58.096 50.000 0.00 0.00 0.00 4.79
2247 3939 1.422024 TGGTTTTTGAGATGGGACGGA 59.578 47.619 0.00 0.00 0.00 4.69
2248 3940 2.158593 TGGTTTTTGAGATGGGACGGAA 60.159 45.455 0.00 0.00 0.00 4.30
2249 3941 3.089284 GGTTTTTGAGATGGGACGGAAT 58.911 45.455 0.00 0.00 0.00 3.01
2250 3942 3.119495 GGTTTTTGAGATGGGACGGAATG 60.119 47.826 0.00 0.00 0.00 2.67
2251 3943 2.418368 TTTGAGATGGGACGGAATGG 57.582 50.000 0.00 0.00 0.00 3.16
2252 3944 1.578897 TTGAGATGGGACGGAATGGA 58.421 50.000 0.00 0.00 0.00 3.41
2253 3945 1.806496 TGAGATGGGACGGAATGGAT 58.194 50.000 0.00 0.00 0.00 3.41
2254 3946 2.126882 TGAGATGGGACGGAATGGATT 58.873 47.619 0.00 0.00 0.00 3.01
2255 3947 2.509548 TGAGATGGGACGGAATGGATTT 59.490 45.455 0.00 0.00 0.00 2.17
2256 3948 3.714280 TGAGATGGGACGGAATGGATTTA 59.286 43.478 0.00 0.00 0.00 1.40
2257 3949 4.350816 TGAGATGGGACGGAATGGATTTAT 59.649 41.667 0.00 0.00 0.00 1.40
2258 3950 5.163099 TGAGATGGGACGGAATGGATTTATT 60.163 40.000 0.00 0.00 0.00 1.40
2259 3951 5.316987 AGATGGGACGGAATGGATTTATTC 58.683 41.667 0.00 0.00 36.55 1.75
2260 3952 4.511786 TGGGACGGAATGGATTTATTCA 57.488 40.909 0.00 0.00 38.51 2.57
2261 3953 5.060427 TGGGACGGAATGGATTTATTCAT 57.940 39.130 0.00 0.00 38.51 2.57
2262 3954 5.070001 TGGGACGGAATGGATTTATTCATC 58.930 41.667 0.00 0.00 38.51 2.92
2263 3955 5.070001 GGGACGGAATGGATTTATTCATCA 58.930 41.667 0.00 0.00 38.51 3.07
2264 3956 5.048713 GGGACGGAATGGATTTATTCATCAC 60.049 44.000 0.00 0.00 38.51 3.06
2265 3957 5.530915 GGACGGAATGGATTTATTCATCACA 59.469 40.000 0.00 0.00 38.51 3.58
2266 3958 6.377327 ACGGAATGGATTTATTCATCACAC 57.623 37.500 0.00 0.00 38.51 3.82
2267 3959 6.122277 ACGGAATGGATTTATTCATCACACT 58.878 36.000 0.00 0.00 38.51 3.55
2268 3960 6.260936 ACGGAATGGATTTATTCATCACACTC 59.739 38.462 0.00 0.00 38.51 3.51
2269 3961 6.293626 CGGAATGGATTTATTCATCACACTCC 60.294 42.308 0.00 0.00 38.51 3.85
2270 3962 6.774656 GGAATGGATTTATTCATCACACTCCT 59.225 38.462 0.00 0.00 38.51 3.69
2271 3963 7.040823 GGAATGGATTTATTCATCACACTCCTC 60.041 40.741 0.00 0.00 38.51 3.71
2272 3964 6.312141 TGGATTTATTCATCACACTCCTCA 57.688 37.500 0.00 0.00 0.00 3.86
2273 3965 6.720309 TGGATTTATTCATCACACTCCTCAA 58.280 36.000 0.00 0.00 0.00 3.02
2274 3966 7.174413 TGGATTTATTCATCACACTCCTCAAA 58.826 34.615 0.00 0.00 0.00 2.69
2275 3967 7.835682 TGGATTTATTCATCACACTCCTCAAAT 59.164 33.333 0.00 0.00 0.00 2.32
2276 3968 8.133627 GGATTTATTCATCACACTCCTCAAATG 58.866 37.037 0.00 0.00 0.00 2.32
2277 3969 8.585471 ATTTATTCATCACACTCCTCAAATGT 57.415 30.769 0.00 0.00 0.00 2.71
2278 3970 8.408043 TTTATTCATCACACTCCTCAAATGTT 57.592 30.769 0.00 0.00 0.00 2.71
2279 3971 5.694231 TTCATCACACTCCTCAAATGTTG 57.306 39.130 0.00 0.00 0.00 3.33
2280 3972 4.971939 TCATCACACTCCTCAAATGTTGA 58.028 39.130 0.00 0.00 38.17 3.18
2281 3973 4.756642 TCATCACACTCCTCAAATGTTGAC 59.243 41.667 0.00 0.00 35.46 3.18
2282 3974 4.149511 TCACACTCCTCAAATGTTGACA 57.850 40.909 0.00 0.00 35.46 3.58
2283 3975 4.717877 TCACACTCCTCAAATGTTGACAT 58.282 39.130 0.00 0.00 38.41 3.06
2284 3976 4.756642 TCACACTCCTCAAATGTTGACATC 59.243 41.667 0.00 0.00 35.10 3.06
2285 3977 4.516321 CACACTCCTCAAATGTTGACATCA 59.484 41.667 0.00 0.00 35.10 3.07
2286 3978 5.008911 CACACTCCTCAAATGTTGACATCAA 59.991 40.000 0.00 0.00 35.10 2.57
2287 3979 5.593909 ACACTCCTCAAATGTTGACATCAAA 59.406 36.000 0.00 0.00 37.63 2.69
2288 3980 6.266103 ACACTCCTCAAATGTTGACATCAAAT 59.734 34.615 0.00 0.00 37.63 2.32
2289 3981 7.448161 ACACTCCTCAAATGTTGACATCAAATA 59.552 33.333 0.00 0.00 37.63 1.40
2290 3982 7.752239 CACTCCTCAAATGTTGACATCAAATAC 59.248 37.037 0.00 0.00 37.63 1.89
2291 3983 7.448161 ACTCCTCAAATGTTGACATCAAATACA 59.552 33.333 0.00 0.00 37.63 2.29
2292 3984 8.175925 TCCTCAAATGTTGACATCAAATACAA 57.824 30.769 0.00 0.00 37.63 2.41
2293 3985 8.637099 TCCTCAAATGTTGACATCAAATACAAA 58.363 29.630 0.00 0.00 37.63 2.83
2294 3986 8.918658 CCTCAAATGTTGACATCAAATACAAAG 58.081 33.333 0.00 0.00 37.63 2.77
2295 3987 9.681692 CTCAAATGTTGACATCAAATACAAAGA 57.318 29.630 0.00 0.00 37.63 2.52
2298 3990 9.814899 AAATGTTGACATCAAATACAAAGAACA 57.185 25.926 0.00 0.00 37.63 3.18
2299 3991 8.801715 ATGTTGACATCAAATACAAAGAACAC 57.198 30.769 0.00 0.00 37.63 3.32
2300 3992 7.766283 TGTTGACATCAAATACAAAGAACACA 58.234 30.769 0.00 0.00 37.63 3.72
2301 3993 7.700234 TGTTGACATCAAATACAAAGAACACAC 59.300 33.333 0.00 0.00 37.63 3.82
2302 3994 7.326968 TGACATCAAATACAAAGAACACACA 57.673 32.000 0.00 0.00 0.00 3.72
2303 3995 7.939782 TGACATCAAATACAAAGAACACACAT 58.060 30.769 0.00 0.00 0.00 3.21
2304 3996 9.061435 TGACATCAAATACAAAGAACACACATA 57.939 29.630 0.00 0.00 0.00 2.29
2309 4001 8.661257 TCAAATACAAAGAACACACATATACGG 58.339 33.333 0.00 0.00 0.00 4.02
2310 4002 8.661257 CAAATACAAAGAACACACATATACGGA 58.339 33.333 0.00 0.00 0.00 4.69
2311 4003 8.420374 AATACAAAGAACACACATATACGGAG 57.580 34.615 0.00 0.00 0.00 4.63
2312 4004 5.175859 ACAAAGAACACACATATACGGAGG 58.824 41.667 0.00 0.00 0.00 4.30
2313 4005 5.175859 CAAAGAACACACATATACGGAGGT 58.824 41.667 0.00 0.00 0.00 3.85
2314 4006 6.071221 ACAAAGAACACACATATACGGAGGTA 60.071 38.462 0.00 0.00 0.00 3.08
2315 4007 6.534475 AAGAACACACATATACGGAGGTAA 57.466 37.500 0.00 0.00 31.15 2.85
2316 4008 6.534475 AGAACACACATATACGGAGGTAAA 57.466 37.500 0.00 0.00 31.15 2.01
2317 4009 6.938507 AGAACACACATATACGGAGGTAAAA 58.061 36.000 0.00 0.00 31.15 1.52
2318 4010 7.388437 AGAACACACATATACGGAGGTAAAAA 58.612 34.615 0.00 0.00 31.15 1.94
2341 4033 8.421249 AAAATCATGTAGTGGAAGGAAATTCA 57.579 30.769 0.00 0.00 39.91 2.57
2342 4034 7.636150 AATCATGTAGTGGAAGGAAATTCAG 57.364 36.000 0.00 0.00 39.91 3.02
2343 4035 5.500234 TCATGTAGTGGAAGGAAATTCAGG 58.500 41.667 0.00 0.00 39.91 3.86
2344 4036 5.250543 TCATGTAGTGGAAGGAAATTCAGGA 59.749 40.000 0.00 0.00 39.91 3.86
2345 4037 5.165961 TGTAGTGGAAGGAAATTCAGGAG 57.834 43.478 0.00 0.00 39.91 3.69
2346 4038 3.728385 AGTGGAAGGAAATTCAGGAGG 57.272 47.619 0.00 0.00 39.91 4.30
2347 4039 2.989571 AGTGGAAGGAAATTCAGGAGGT 59.010 45.455 0.00 0.00 39.91 3.85
2348 4040 4.175962 AGTGGAAGGAAATTCAGGAGGTA 58.824 43.478 0.00 0.00 39.91 3.08
2349 4041 4.601857 AGTGGAAGGAAATTCAGGAGGTAA 59.398 41.667 0.00 0.00 39.91 2.85
2350 4042 5.074515 AGTGGAAGGAAATTCAGGAGGTAAA 59.925 40.000 0.00 0.00 39.91 2.01
2351 4043 5.773176 GTGGAAGGAAATTCAGGAGGTAAAA 59.227 40.000 0.00 0.00 39.91 1.52
2352 4044 6.266786 GTGGAAGGAAATTCAGGAGGTAAAAA 59.733 38.462 0.00 0.00 39.91 1.94
2369 4061 2.717639 AAAACCAGATGGGGATCTCG 57.282 50.000 3.48 0.00 42.91 4.04
2370 4062 0.181350 AAACCAGATGGGGATCTCGC 59.819 55.000 3.48 0.00 42.91 5.03
2371 4063 0.692419 AACCAGATGGGGATCTCGCT 60.692 55.000 3.48 0.00 42.91 4.93
2372 4064 1.370437 CCAGATGGGGATCTCGCTG 59.630 63.158 0.00 0.00 0.00 5.18
2373 4065 1.370437 CAGATGGGGATCTCGCTGG 59.630 63.158 0.00 0.00 0.00 4.85
2374 4066 1.840650 AGATGGGGATCTCGCTGGG 60.841 63.158 0.00 0.00 0.00 4.45
2375 4067 3.543536 GATGGGGATCTCGCTGGGC 62.544 68.421 0.00 0.00 0.00 5.36
2390 4082 3.866582 GGCGTCCTGGGGAGGATG 61.867 72.222 10.00 6.02 45.40 3.51
2391 4083 2.764128 GCGTCCTGGGGAGGATGA 60.764 66.667 13.49 0.00 45.45 2.92
2392 4084 2.801631 GCGTCCTGGGGAGGATGAG 61.802 68.421 13.49 1.69 45.45 2.90
2393 4085 2.136878 CGTCCTGGGGAGGATGAGG 61.137 68.421 4.53 0.00 45.45 3.86
2394 4086 1.314867 GTCCTGGGGAGGATGAGGA 59.685 63.158 0.00 0.00 40.51 3.71
2395 4087 0.762461 GTCCTGGGGAGGATGAGGAG 60.762 65.000 0.00 0.00 40.51 3.69
2396 4088 1.461075 CCTGGGGAGGATGAGGAGG 60.461 68.421 0.00 0.00 0.00 4.30
2397 4089 2.040464 TGGGGAGGATGAGGAGGC 60.040 66.667 0.00 0.00 0.00 4.70
2398 4090 3.237741 GGGGAGGATGAGGAGGCG 61.238 72.222 0.00 0.00 0.00 5.52
2399 4091 2.444895 GGGAGGATGAGGAGGCGT 60.445 66.667 0.00 0.00 0.00 5.68
2400 4092 2.503382 GGGAGGATGAGGAGGCGTC 61.503 68.421 0.00 0.00 0.00 5.19
2401 4093 2.503382 GGAGGATGAGGAGGCGTCC 61.503 68.421 17.88 17.88 44.33 4.79
2410 4102 4.779733 GAGGCGTCCTGGGGAGGA 62.780 72.222 10.00 0.00 39.66 3.71
2411 4103 4.095400 AGGCGTCCTGGGGAGGAT 62.095 66.667 10.00 0.00 39.66 3.24
2412 4104 3.866582 GGCGTCCTGGGGAGGATG 61.867 72.222 10.00 6.02 45.40 3.51
2413 4105 2.764128 GCGTCCTGGGGAGGATGA 60.764 66.667 13.49 0.00 45.45 2.92
2414 4106 2.801631 GCGTCCTGGGGAGGATGAG 61.802 68.421 13.49 1.69 45.45 2.90
2415 4107 1.075970 CGTCCTGGGGAGGATGAGA 60.076 63.158 4.53 0.00 45.45 3.27
2416 4108 0.687757 CGTCCTGGGGAGGATGAGAA 60.688 60.000 4.53 0.00 45.45 2.87
2417 4109 1.127343 GTCCTGGGGAGGATGAGAAG 58.873 60.000 0.00 0.00 40.51 2.85
2418 4110 0.030705 TCCTGGGGAGGATGAGAAGG 60.031 60.000 0.00 0.00 32.09 3.46
2419 4111 1.704007 CCTGGGGAGGATGAGAAGGC 61.704 65.000 0.00 0.00 0.00 4.35
2420 4112 2.037620 CTGGGGAGGATGAGAAGGCG 62.038 65.000 0.00 0.00 0.00 5.52
2421 4113 2.110006 GGGAGGATGAGAAGGCGC 59.890 66.667 0.00 0.00 0.00 6.53
2422 4114 2.439104 GGGAGGATGAGAAGGCGCT 61.439 63.158 7.64 0.00 0.00 5.92
2423 4115 1.227497 GGAGGATGAGAAGGCGCTG 60.227 63.158 7.64 0.00 0.00 5.18
2424 4116 1.886777 GAGGATGAGAAGGCGCTGC 60.887 63.158 7.64 0.00 0.00 5.25
2425 4117 2.124983 GGATGAGAAGGCGCTGCA 60.125 61.111 7.64 0.00 0.00 4.41
2426 4118 2.178890 GGATGAGAAGGCGCTGCAG 61.179 63.158 10.11 10.11 0.00 4.41
2427 4119 2.124819 ATGAGAAGGCGCTGCAGG 60.125 61.111 17.12 6.85 0.00 4.85
2447 4139 4.033776 CATGCACGGGGGAGGTGT 62.034 66.667 0.00 0.00 37.70 4.16
2448 4140 3.256960 ATGCACGGGGGAGGTGTT 61.257 61.111 0.00 0.00 37.70 3.32
2449 4141 3.567579 ATGCACGGGGGAGGTGTTG 62.568 63.158 0.00 0.00 37.70 3.33
2450 4142 4.265056 GCACGGGGGAGGTGTTGT 62.265 66.667 0.00 0.00 37.70 3.32
2451 4143 2.281484 CACGGGGGAGGTGTTGTG 60.281 66.667 0.00 0.00 0.00 3.33
2452 4144 2.446994 ACGGGGGAGGTGTTGTGA 60.447 61.111 0.00 0.00 0.00 3.58
2453 4145 2.032071 CGGGGGAGGTGTTGTGAC 59.968 66.667 0.00 0.00 0.00 3.67
2454 4146 2.434774 GGGGGAGGTGTTGTGACC 59.565 66.667 0.00 0.00 36.09 4.02
2455 4147 2.457323 GGGGGAGGTGTTGTGACCA 61.457 63.158 0.00 0.00 38.63 4.02
2456 4148 1.767692 GGGGAGGTGTTGTGACCAT 59.232 57.895 0.00 0.00 38.63 3.55
2457 4149 0.609131 GGGGAGGTGTTGTGACCATG 60.609 60.000 0.00 0.00 38.63 3.66
2458 4150 0.609131 GGGAGGTGTTGTGACCATGG 60.609 60.000 11.19 11.19 38.63 3.66
2459 4151 0.609131 GGAGGTGTTGTGACCATGGG 60.609 60.000 18.09 0.00 38.63 4.00
2460 4152 1.228552 AGGTGTTGTGACCATGGGC 60.229 57.895 18.09 15.32 38.63 5.36
2461 4153 2.625823 GGTGTTGTGACCATGGGCG 61.626 63.158 18.09 0.00 35.88 6.13
2462 4154 2.282110 TGTTGTGACCATGGGCGG 60.282 61.111 18.09 0.00 0.00 6.13
2463 4155 3.061848 GTTGTGACCATGGGCGGG 61.062 66.667 18.09 0.00 0.00 6.13
2464 4156 4.358841 TTGTGACCATGGGCGGGG 62.359 66.667 18.09 0.00 0.00 5.73
2466 4158 4.489771 GTGACCATGGGCGGGGAG 62.490 72.222 18.09 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.831664 AGTAGATCCCCTGTTGATATGTTT 57.168 37.500 0.00 0.00 0.00 2.83
1 2 6.831664 AAGTAGATCCCCTGTTGATATGTT 57.168 37.500 0.00 0.00 0.00 2.71
2 3 6.463049 CGAAAGTAGATCCCCTGTTGATATGT 60.463 42.308 0.00 0.00 0.00 2.29
3 4 5.928839 CGAAAGTAGATCCCCTGTTGATATG 59.071 44.000 0.00 0.00 0.00 1.78
4 5 5.839063 TCGAAAGTAGATCCCCTGTTGATAT 59.161 40.000 0.00 0.00 0.00 1.63
5 6 5.205821 TCGAAAGTAGATCCCCTGTTGATA 58.794 41.667 0.00 0.00 0.00 2.15
6 7 4.030913 TCGAAAGTAGATCCCCTGTTGAT 58.969 43.478 0.00 0.00 0.00 2.57
7 8 3.437213 TCGAAAGTAGATCCCCTGTTGA 58.563 45.455 0.00 0.00 0.00 3.18
8 9 3.430929 CCTCGAAAGTAGATCCCCTGTTG 60.431 52.174 0.00 0.00 0.00 3.33
9 10 2.766828 CCTCGAAAGTAGATCCCCTGTT 59.233 50.000 0.00 0.00 0.00 3.16
10 11 2.024273 TCCTCGAAAGTAGATCCCCTGT 60.024 50.000 0.00 0.00 0.00 4.00
11 12 2.667470 TCCTCGAAAGTAGATCCCCTG 58.333 52.381 0.00 0.00 0.00 4.45
12 13 3.141272 AGATCCTCGAAAGTAGATCCCCT 59.859 47.826 0.00 0.00 39.70 4.79
13 14 3.502356 AGATCCTCGAAAGTAGATCCCC 58.498 50.000 0.00 0.00 39.70 4.81
14 15 4.776795 GAGATCCTCGAAAGTAGATCCC 57.223 50.000 0.00 0.00 39.70 3.85
28 29 1.543802 GATTCATCGAGGCGAGATCCT 59.456 52.381 0.00 0.00 39.91 3.24
29 30 1.543802 AGATTCATCGAGGCGAGATCC 59.456 52.381 0.00 0.00 39.91 3.36
30 31 3.296322 AAGATTCATCGAGGCGAGATC 57.704 47.619 0.00 0.00 39.91 2.75
31 32 3.742433 AAAGATTCATCGAGGCGAGAT 57.258 42.857 0.00 0.00 39.91 2.75
32 33 3.526931 AAAAGATTCATCGAGGCGAGA 57.473 42.857 0.00 0.00 39.91 4.04
33 34 4.747108 ACATAAAAGATTCATCGAGGCGAG 59.253 41.667 0.00 0.00 39.91 5.03
34 35 4.507756 CACATAAAAGATTCATCGAGGCGA 59.492 41.667 0.00 0.00 41.13 5.54
35 36 4.507756 TCACATAAAAGATTCATCGAGGCG 59.492 41.667 0.00 0.00 0.00 5.52
36 37 5.991328 TCACATAAAAGATTCATCGAGGC 57.009 39.130 0.00 0.00 0.00 4.70
37 38 8.236586 TGTTTTCACATAAAAGATTCATCGAGG 58.763 33.333 0.00 0.00 0.00 4.63
38 39 9.270576 CTGTTTTCACATAAAAGATTCATCGAG 57.729 33.333 0.00 0.00 30.39 4.04
39 40 8.783093 ACTGTTTTCACATAAAAGATTCATCGA 58.217 29.630 0.00 0.00 30.39 3.59
40 41 8.955061 ACTGTTTTCACATAAAAGATTCATCG 57.045 30.769 0.00 0.00 30.39 3.84
57 58 7.955552 GTCGCTCCGATTGAAAAACTGTTTTC 61.956 42.308 17.94 12.09 43.91 2.29
58 59 4.041723 CGCTCCGATTGAAAAACTGTTTT 58.958 39.130 12.50 12.50 39.70 2.43
59 60 3.314080 TCGCTCCGATTGAAAAACTGTTT 59.686 39.130 0.00 0.00 0.00 2.83
60 61 2.875933 TCGCTCCGATTGAAAAACTGTT 59.124 40.909 0.00 0.00 0.00 3.16
61 62 2.223377 GTCGCTCCGATTGAAAAACTGT 59.777 45.455 0.00 0.00 38.42 3.55
62 63 2.721797 CGTCGCTCCGATTGAAAAACTG 60.722 50.000 0.00 0.00 38.42 3.16
63 64 1.459592 CGTCGCTCCGATTGAAAAACT 59.540 47.619 0.00 0.00 38.42 2.66
64 65 1.463528 CCGTCGCTCCGATTGAAAAAC 60.464 52.381 0.00 0.00 38.42 2.43
65 66 0.793861 CCGTCGCTCCGATTGAAAAA 59.206 50.000 0.00 0.00 38.42 1.94
66 67 0.320073 ACCGTCGCTCCGATTGAAAA 60.320 50.000 0.00 0.00 38.42 2.29
67 68 0.320073 AACCGTCGCTCCGATTGAAA 60.320 50.000 0.00 0.00 38.42 2.69
68 69 0.320073 AAACCGTCGCTCCGATTGAA 60.320 50.000 0.00 0.00 38.42 2.69
69 70 1.011968 CAAACCGTCGCTCCGATTGA 61.012 55.000 0.00 0.00 38.42 2.57
70 71 1.289109 ACAAACCGTCGCTCCGATTG 61.289 55.000 0.00 2.27 38.42 2.67
71 72 1.005394 ACAAACCGTCGCTCCGATT 60.005 52.632 0.00 0.00 38.42 3.34
72 73 1.736645 CACAAACCGTCGCTCCGAT 60.737 57.895 0.00 0.00 38.42 4.18
73 74 2.355363 CACAAACCGTCGCTCCGA 60.355 61.111 0.00 0.00 0.00 4.55
74 75 4.072088 GCACAAACCGTCGCTCCG 62.072 66.667 0.00 0.00 0.00 4.63
75 76 1.373748 TAGCACAAACCGTCGCTCC 60.374 57.895 0.00 0.00 34.90 4.70
76 77 0.942410 TGTAGCACAAACCGTCGCTC 60.942 55.000 0.00 0.00 34.90 5.03
77 78 0.531090 TTGTAGCACAAACCGTCGCT 60.531 50.000 0.00 0.00 34.76 4.93
78 79 0.305313 TTTGTAGCACAAACCGTCGC 59.695 50.000 9.46 0.00 42.55 5.19
79 80 2.223066 TGTTTTGTAGCACAAACCGTCG 60.223 45.455 12.14 0.00 46.53 5.12
80 81 3.408288 TGTTTTGTAGCACAAACCGTC 57.592 42.857 12.14 6.36 46.53 4.79
81 82 4.379339 AATGTTTTGTAGCACAAACCGT 57.621 36.364 12.14 6.21 46.53 4.83
82 83 5.289675 TCAAAATGTTTTGTAGCACAAACCG 59.710 36.000 15.51 0.00 46.53 4.44
83 84 6.654793 TCAAAATGTTTTGTAGCACAAACC 57.345 33.333 15.51 7.75 46.53 3.27
84 85 9.553418 AAATTCAAAATGTTTTGTAGCACAAAC 57.447 25.926 15.51 9.21 46.53 2.93
85 86 9.552114 CAAATTCAAAATGTTTTGTAGCACAAA 57.448 25.926 15.51 9.46 45.37 2.83
86 87 8.939929 TCAAATTCAAAATGTTTTGTAGCACAA 58.060 25.926 15.51 4.75 45.77 3.33
87 88 8.484641 TCAAATTCAAAATGTTTTGTAGCACA 57.515 26.923 15.51 0.00 45.77 4.57
88 89 9.424659 CTTCAAATTCAAAATGTTTTGTAGCAC 57.575 29.630 15.51 0.00 45.77 4.40
89 90 9.376075 TCTTCAAATTCAAAATGTTTTGTAGCA 57.624 25.926 15.51 2.75 45.77 3.49
137 138 9.669353 CCATGCATATAGAACAAAATTACTGAC 57.331 33.333 0.00 0.00 0.00 3.51
138 139 9.407380 ACCATGCATATAGAACAAAATTACTGA 57.593 29.630 0.00 0.00 0.00 3.41
168 169 7.052248 TGCACTAGTCAATCTCATGAAATCAT 58.948 34.615 0.00 0.00 36.96 2.45
169 170 6.408869 TGCACTAGTCAATCTCATGAAATCA 58.591 36.000 0.00 0.00 0.00 2.57
170 171 6.915544 TGCACTAGTCAATCTCATGAAATC 57.084 37.500 0.00 0.00 0.00 2.17
171 172 7.692460 TTTGCACTAGTCAATCTCATGAAAT 57.308 32.000 0.00 0.00 0.00 2.17
172 173 7.692460 ATTTGCACTAGTCAATCTCATGAAA 57.308 32.000 0.00 0.00 0.00 2.69
173 174 8.043113 AGTATTTGCACTAGTCAATCTCATGAA 58.957 33.333 0.00 0.00 0.00 2.57
174 175 7.559486 AGTATTTGCACTAGTCAATCTCATGA 58.441 34.615 0.00 0.00 0.00 3.07
175 176 7.783090 AGTATTTGCACTAGTCAATCTCATG 57.217 36.000 0.00 0.00 0.00 3.07
176 177 8.798859 AAAGTATTTGCACTAGTCAATCTCAT 57.201 30.769 0.00 0.00 36.60 2.90
193 194 7.054491 AGCAACAGATCCAAACAAAGTATTT 57.946 32.000 0.00 0.00 40.26 1.40
194 195 6.655078 AGCAACAGATCCAAACAAAGTATT 57.345 33.333 0.00 0.00 0.00 1.89
195 196 7.759489 TTAGCAACAGATCCAAACAAAGTAT 57.241 32.000 0.00 0.00 0.00 2.12
196 197 7.575414 TTTAGCAACAGATCCAAACAAAGTA 57.425 32.000 0.00 0.00 0.00 2.24
197 198 6.463995 TTTAGCAACAGATCCAAACAAAGT 57.536 33.333 0.00 0.00 0.00 2.66
198 199 7.951530 AATTTAGCAACAGATCCAAACAAAG 57.048 32.000 0.00 0.00 0.00 2.77
199 200 7.168972 CGAAATTTAGCAACAGATCCAAACAAA 59.831 33.333 0.00 0.00 0.00 2.83
200 201 6.640499 CGAAATTTAGCAACAGATCCAAACAA 59.360 34.615 0.00 0.00 0.00 2.83
201 202 6.148948 CGAAATTTAGCAACAGATCCAAACA 58.851 36.000 0.00 0.00 0.00 2.83
202 203 6.149633 ACGAAATTTAGCAACAGATCCAAAC 58.850 36.000 0.00 0.00 0.00 2.93
203 204 6.325919 ACGAAATTTAGCAACAGATCCAAA 57.674 33.333 0.00 0.00 0.00 3.28
204 205 5.957842 ACGAAATTTAGCAACAGATCCAA 57.042 34.783 0.00 0.00 0.00 3.53
205 206 5.062934 CGTACGAAATTTAGCAACAGATCCA 59.937 40.000 10.44 0.00 0.00 3.41
206 207 5.063060 ACGTACGAAATTTAGCAACAGATCC 59.937 40.000 24.41 0.00 0.00 3.36
207 208 6.091123 ACGTACGAAATTTAGCAACAGATC 57.909 37.500 24.41 0.00 0.00 2.75
208 209 5.063060 GGACGTACGAAATTTAGCAACAGAT 59.937 40.000 24.41 0.00 0.00 2.90
209 210 4.386652 GGACGTACGAAATTTAGCAACAGA 59.613 41.667 24.41 0.00 0.00 3.41
210 211 4.634991 GGACGTACGAAATTTAGCAACAG 58.365 43.478 24.41 0.00 0.00 3.16
211 212 3.121611 CGGACGTACGAAATTTAGCAACA 59.878 43.478 24.41 0.00 35.47 3.33
212 213 3.364621 TCGGACGTACGAAATTTAGCAAC 59.635 43.478 22.96 0.00 40.34 4.17
213 214 3.573598 TCGGACGTACGAAATTTAGCAA 58.426 40.909 22.96 0.00 40.34 3.91
214 215 3.214697 TCGGACGTACGAAATTTAGCA 57.785 42.857 22.96 0.00 40.34 3.49
223 224 1.535028 TGCTAACTTTCGGACGTACGA 59.465 47.619 21.19 21.19 41.76 3.43
224 225 1.645751 GTGCTAACTTTCGGACGTACG 59.354 52.381 15.74 15.74 0.00 3.67
225 226 2.664916 TGTGCTAACTTTCGGACGTAC 58.335 47.619 0.00 0.00 0.00 3.67
226 227 3.367992 TTGTGCTAACTTTCGGACGTA 57.632 42.857 0.00 0.00 0.00 3.57
227 228 2.228138 TTGTGCTAACTTTCGGACGT 57.772 45.000 0.00 0.00 0.00 4.34
228 229 2.093783 GGATTGTGCTAACTTTCGGACG 59.906 50.000 0.00 0.00 0.00 4.79
229 230 3.071479 TGGATTGTGCTAACTTTCGGAC 58.929 45.455 0.00 0.00 0.00 4.79
230 231 3.410631 TGGATTGTGCTAACTTTCGGA 57.589 42.857 0.00 0.00 0.00 4.55
231 232 4.701956 ATTGGATTGTGCTAACTTTCGG 57.298 40.909 0.00 0.00 0.00 4.30
232 233 6.662414 TCTATTGGATTGTGCTAACTTTCG 57.338 37.500 0.00 0.00 0.00 3.46
233 234 9.691362 TTTTTCTATTGGATTGTGCTAACTTTC 57.309 29.630 0.00 0.00 0.00 2.62
234 235 9.696917 CTTTTTCTATTGGATTGTGCTAACTTT 57.303 29.630 0.00 0.00 0.00 2.66
235 236 8.306761 CCTTTTTCTATTGGATTGTGCTAACTT 58.693 33.333 0.00 0.00 0.00 2.66
236 237 7.669722 TCCTTTTTCTATTGGATTGTGCTAACT 59.330 33.333 0.00 0.00 0.00 2.24
237 238 7.826690 TCCTTTTTCTATTGGATTGTGCTAAC 58.173 34.615 0.00 0.00 0.00 2.34
238 239 8.415950 TTCCTTTTTCTATTGGATTGTGCTAA 57.584 30.769 0.00 0.00 0.00 3.09
239 240 8.415950 TTTCCTTTTTCTATTGGATTGTGCTA 57.584 30.769 0.00 0.00 0.00 3.49
240 241 6.916360 TTCCTTTTTCTATTGGATTGTGCT 57.084 33.333 0.00 0.00 0.00 4.40
241 242 9.305925 CTATTTCCTTTTTCTATTGGATTGTGC 57.694 33.333 0.00 0.00 0.00 4.57
389 393 8.600625 GTGACTTTGTTTCCTTATTTTGTTTCC 58.399 33.333 0.00 0.00 0.00 3.13
450 456 8.896744 TGAAATTTTGCATGTTTGGTAAAATCA 58.103 25.926 0.00 0.00 38.85 2.57
451 457 9.727627 TTGAAATTTTGCATGTTTGGTAAAATC 57.272 25.926 0.00 0.00 38.85 2.17
452 458 9.733219 CTTGAAATTTTGCATGTTTGGTAAAAT 57.267 25.926 0.00 0.00 40.62 1.82
453 459 8.950210 TCTTGAAATTTTGCATGTTTGGTAAAA 58.050 25.926 0.00 0.00 35.01 1.52
528 535 9.388506 TGTTCCAAAATTGCTTTAAAGAATTGA 57.611 25.926 19.48 11.39 0.00 2.57
534 541 6.423604 ACCGATGTTCCAAAATTGCTTTAAAG 59.576 34.615 11.02 11.02 0.00 1.85
537 544 5.461032 ACCGATGTTCCAAAATTGCTTTA 57.539 34.783 0.00 0.00 0.00 1.85
575 582 4.035017 GTGAACAAACATTCGTGAGGTTG 58.965 43.478 0.00 0.00 0.00 3.77
576 583 3.066203 GGTGAACAAACATTCGTGAGGTT 59.934 43.478 0.00 0.00 0.00 3.50
670 677 5.914898 AAAATCGGAACCAATAGGGAAAG 57.085 39.130 0.00 0.00 41.15 2.62
681 688 4.215613 AGTTTCTGCACTAAAATCGGAACC 59.784 41.667 0.00 0.00 0.00 3.62
682 689 5.358298 AGTTTCTGCACTAAAATCGGAAC 57.642 39.130 0.00 0.00 0.00 3.62
771 781 7.786178 TGCTTGTTTATGCTCGATAATAACT 57.214 32.000 0.00 0.00 0.00 2.24
900 910 0.672401 TGCGTCGGAGAATGGAAACC 60.672 55.000 0.00 0.00 39.69 3.27
907 917 2.428890 AGAGAATTCTGCGTCGGAGAAT 59.571 45.455 29.57 29.57 41.07 2.40
911 921 1.133216 CAGAGAGAATTCTGCGTCGGA 59.867 52.381 14.00 0.00 38.28 4.55
914 924 4.364415 ACTACAGAGAGAATTCTGCGTC 57.636 45.455 14.00 6.82 46.77 5.19
968 978 1.852895 CGAACAAGCTAGGTATCACGC 59.147 52.381 0.00 0.00 0.00 5.34
1185 1195 3.710722 CAGGCCCCTCGAAGCTGT 61.711 66.667 0.00 0.00 0.00 4.40
1249 2923 1.885388 TCACGTTGTGCTTCACCGG 60.885 57.895 0.00 0.00 32.73 5.28
1365 3039 1.080772 GTCGATGCACTCCACGTGA 60.081 57.895 19.30 2.03 46.81 4.35
1464 3144 2.384203 GCTTACCGTGCAAGCCTAG 58.616 57.895 0.00 0.00 42.08 3.02
1486 3166 1.287815 CTTGTACGCACGTCCCTCA 59.712 57.895 0.00 0.00 0.00 3.86
1558 3240 0.970427 TACATCGCTGCCCTGTCTGA 60.970 55.000 5.17 0.00 0.00 3.27
1561 3243 1.331756 CATTTACATCGCTGCCCTGTC 59.668 52.381 5.17 0.00 0.00 3.51
1565 3247 1.668419 ACTCATTTACATCGCTGCCC 58.332 50.000 0.00 0.00 0.00 5.36
1597 3285 5.984725 TCACGGTGTCCATCAGTAATAAAT 58.015 37.500 8.17 0.00 0.00 1.40
1599 3287 5.356426 CATCACGGTGTCCATCAGTAATAA 58.644 41.667 8.17 0.00 0.00 1.40
1600 3288 4.202212 CCATCACGGTGTCCATCAGTAATA 60.202 45.833 8.17 0.00 0.00 0.98
1601 3289 3.432186 CCATCACGGTGTCCATCAGTAAT 60.432 47.826 8.17 0.00 0.00 1.89
1652 3341 0.326927 TCCTTTTAGGGCCAACGAGG 59.673 55.000 6.18 8.03 35.59 4.63
1653 3342 2.420058 ATCCTTTTAGGGCCAACGAG 57.580 50.000 6.18 0.00 35.59 4.18
1687 3378 8.946085 TGTATGAACTCTACAAAATGGACATTC 58.054 33.333 0.00 0.00 0.00 2.67
1720 3411 6.224584 TGTTTCGTAGTGATGGATTTACACA 58.775 36.000 0.00 0.00 37.05 3.72
1722 3413 6.460781 ACTGTTTCGTAGTGATGGATTTACA 58.539 36.000 0.00 0.00 0.00 2.41
1723 3414 6.588756 TGACTGTTTCGTAGTGATGGATTTAC 59.411 38.462 0.00 0.00 0.00 2.01
1728 3419 4.801330 ATGACTGTTTCGTAGTGATGGA 57.199 40.909 0.00 0.00 0.00 3.41
1729 3420 4.929211 TGAATGACTGTTTCGTAGTGATGG 59.071 41.667 0.00 0.00 0.00 3.51
1730 3421 5.163953 GGTGAATGACTGTTTCGTAGTGATG 60.164 44.000 0.00 0.00 0.00 3.07
1731 3422 4.929808 GGTGAATGACTGTTTCGTAGTGAT 59.070 41.667 0.00 0.00 0.00 3.06
1732 3423 4.038763 AGGTGAATGACTGTTTCGTAGTGA 59.961 41.667 0.00 0.00 0.00 3.41
1733 3424 4.307432 AGGTGAATGACTGTTTCGTAGTG 58.693 43.478 0.00 0.00 0.00 2.74
1734 3425 4.557205 GAGGTGAATGACTGTTTCGTAGT 58.443 43.478 0.00 0.00 0.00 2.73
1735 3426 3.608506 CGAGGTGAATGACTGTTTCGTAG 59.391 47.826 0.00 0.00 0.00 3.51
1737 3428 2.404215 CGAGGTGAATGACTGTTTCGT 58.596 47.619 0.00 0.00 0.00 3.85
1739 3430 2.417719 AGCGAGGTGAATGACTGTTTC 58.582 47.619 0.00 0.00 0.00 2.78
1740 3431 2.550830 AGCGAGGTGAATGACTGTTT 57.449 45.000 0.00 0.00 0.00 2.83
1745 3436 9.434559 GTTTATTTATAAAGCGAGGTGAATGAC 57.565 33.333 3.94 0.00 33.31 3.06
1752 3443 7.362315 GGTGGTTGTTTATTTATAAAGCGAGGT 60.362 37.037 3.94 0.00 33.31 3.85
1753 3444 6.970613 GGTGGTTGTTTATTTATAAAGCGAGG 59.029 38.462 3.94 0.00 33.31 4.63
1797 3489 8.352942 AGCCTTTGATTACTTTTCTTGTACTTG 58.647 33.333 0.00 0.00 0.00 3.16
1815 3507 3.206150 GTCTTGTTGTCTCAGCCTTTGA 58.794 45.455 0.00 0.00 0.00 2.69
1819 3511 2.945668 GTTTGTCTTGTTGTCTCAGCCT 59.054 45.455 0.00 0.00 0.00 4.58
1845 3537 8.576442 CCCACTCATGTTTTTCTTTATAGTTGT 58.424 33.333 0.00 0.00 0.00 3.32
1860 3552 0.328258 GCCACCTACCCACTCATGTT 59.672 55.000 0.00 0.00 0.00 2.71
1871 3563 2.536997 ATCCTTGCCACGCCACCTAC 62.537 60.000 0.00 0.00 0.00 3.18
1905 3597 2.117156 ATTGATGACTGCGGCAGGC 61.117 57.895 31.38 30.13 40.49 4.85
1906 3598 1.028330 ACATTGATGACTGCGGCAGG 61.028 55.000 31.38 14.76 35.51 4.85
1907 3599 0.376152 GACATTGATGACTGCGGCAG 59.624 55.000 27.43 27.43 37.52 4.85
1908 3600 0.036105 AGACATTGATGACTGCGGCA 60.036 50.000 1.29 1.29 31.88 5.69
1909 3601 1.939974 TAGACATTGATGACTGCGGC 58.060 50.000 6.28 0.00 34.76 6.53
1910 3602 3.721035 TGATAGACATTGATGACTGCGG 58.279 45.455 6.28 0.00 34.76 5.69
1911 3603 4.748600 ACATGATAGACATTGATGACTGCG 59.251 41.667 0.00 0.00 37.07 5.18
1912 3604 5.107568 CGACATGATAGACATTGATGACTGC 60.108 44.000 0.00 0.61 37.07 4.40
1913 3605 5.107568 GCGACATGATAGACATTGATGACTG 60.108 44.000 0.00 0.00 37.07 3.51
1953 3645 3.199727 TCACATGCTATTTAGGCAGTGGA 59.800 43.478 0.00 2.17 43.15 4.02
1956 3648 4.194640 CTGTCACATGCTATTTAGGCAGT 58.805 43.478 0.00 0.00 43.15 4.40
1982 3674 6.916360 ATCCAAATTCCTAGTCTTTTTGCA 57.084 33.333 0.00 0.00 0.00 4.08
1990 3682 9.084533 ACTGACTCTATATCCAAATTCCTAGTC 57.915 37.037 0.00 0.00 0.00 2.59
1991 3683 8.865090 CACTGACTCTATATCCAAATTCCTAGT 58.135 37.037 0.00 0.00 0.00 2.57
1993 3685 7.256332 GCCACTGACTCTATATCCAAATTCCTA 60.256 40.741 0.00 0.00 0.00 2.94
2009 3701 2.512515 GCGATGGGCCACTGACTC 60.513 66.667 9.28 0.00 34.80 3.36
2014 3706 1.377725 CTTCTTGCGATGGGCCACT 60.378 57.895 9.28 0.00 42.61 4.00
2032 3724 3.068873 ACAAGATCGCTATTGAGGGAGTC 59.931 47.826 0.00 0.00 46.76 3.36
2047 3739 7.609760 TTGGACAACACATACATACAAGATC 57.390 36.000 0.00 0.00 0.00 2.75
2059 3751 2.892852 CTGGACCATTTGGACAACACAT 59.107 45.455 3.01 0.00 38.94 3.21
2060 3752 2.305928 CTGGACCATTTGGACAACACA 58.694 47.619 3.01 0.00 38.94 3.72
2061 3753 1.613437 CCTGGACCATTTGGACAACAC 59.387 52.381 3.01 0.00 38.94 3.32
2062 3754 1.216678 ACCTGGACCATTTGGACAACA 59.783 47.619 0.00 0.00 38.94 3.33
2065 3757 1.144691 TGACCTGGACCATTTGGACA 58.855 50.000 0.00 2.63 38.94 4.02
2078 3770 2.964740 AGTGTTCATGACGATGACCTG 58.035 47.619 0.00 0.00 38.38 4.00
2102 3794 1.532298 CGTTTCCGAACCAAACACACC 60.532 52.381 0.00 0.00 33.99 4.16
2103 3795 1.397692 TCGTTTCCGAACCAAACACAC 59.602 47.619 0.00 0.00 40.86 3.82
2104 3796 1.735386 TCGTTTCCGAACCAAACACA 58.265 45.000 0.00 0.00 40.86 3.72
2114 3806 3.114668 TCCATTTCACTTCGTTTCCGA 57.885 42.857 0.00 0.00 42.41 4.55
2115 3807 3.889196 TTCCATTTCACTTCGTTTCCG 57.111 42.857 0.00 0.00 0.00 4.30
2116 3808 5.121221 ACATTCCATTTCACTTCGTTTCC 57.879 39.130 0.00 0.00 0.00 3.13
2117 3809 5.757886 TGACATTCCATTTCACTTCGTTTC 58.242 37.500 0.00 0.00 0.00 2.78
2118 3810 5.766150 TGACATTCCATTTCACTTCGTTT 57.234 34.783 0.00 0.00 0.00 3.60
2119 3811 5.473162 TCATGACATTCCATTTCACTTCGTT 59.527 36.000 0.00 0.00 0.00 3.85
2120 3812 5.003160 TCATGACATTCCATTTCACTTCGT 58.997 37.500 0.00 0.00 0.00 3.85
2121 3813 5.550232 TCATGACATTCCATTTCACTTCG 57.450 39.130 0.00 0.00 0.00 3.79
2122 3814 7.982371 GAATCATGACATTCCATTTCACTTC 57.018 36.000 0.00 0.00 0.00 3.01
2133 3825 6.994496 TCTAGTGGAATGGAATCATGACATTC 59.006 38.462 21.07 21.07 45.94 2.67
2134 3826 6.903516 TCTAGTGGAATGGAATCATGACATT 58.096 36.000 9.18 9.18 37.52 2.71
2135 3827 6.505048 TCTAGTGGAATGGAATCATGACAT 57.495 37.500 0.00 0.00 33.18 3.06
2136 3828 5.955961 TCTAGTGGAATGGAATCATGACA 57.044 39.130 0.00 0.00 33.18 3.58
2148 3840 2.478292 ACCGACCCATTCTAGTGGAAT 58.522 47.619 0.91 0.00 44.66 3.01
2149 3841 1.946984 ACCGACCCATTCTAGTGGAA 58.053 50.000 0.91 0.00 42.02 3.53
2150 3842 1.829222 GAACCGACCCATTCTAGTGGA 59.171 52.381 0.91 0.00 42.02 4.02
2151 3843 1.470979 CGAACCGACCCATTCTAGTGG 60.471 57.143 0.00 0.00 39.05 4.00
2152 3844 1.203994 ACGAACCGACCCATTCTAGTG 59.796 52.381 0.00 0.00 0.00 2.74
2153 3845 1.475682 GACGAACCGACCCATTCTAGT 59.524 52.381 0.00 0.00 0.00 2.57
2154 3846 1.749634 AGACGAACCGACCCATTCTAG 59.250 52.381 0.00 0.00 0.00 2.43
2155 3847 1.843368 AGACGAACCGACCCATTCTA 58.157 50.000 0.00 0.00 0.00 2.10
2156 3848 0.974383 AAGACGAACCGACCCATTCT 59.026 50.000 0.00 0.00 0.00 2.40
2157 3849 1.804601 AAAGACGAACCGACCCATTC 58.195 50.000 0.00 0.00 0.00 2.67
2158 3850 2.691927 GTAAAGACGAACCGACCCATT 58.308 47.619 0.00 0.00 0.00 3.16
2159 3851 2.375173 GTAAAGACGAACCGACCCAT 57.625 50.000 0.00 0.00 0.00 4.00
2160 3852 3.892200 GTAAAGACGAACCGACCCA 57.108 52.632 0.00 0.00 0.00 4.51
2171 3863 8.553696 TGAATTTCTTCTACCAAACGTAAAGAC 58.446 33.333 0.00 0.00 30.52 3.01
2172 3864 8.665643 TGAATTTCTTCTACCAAACGTAAAGA 57.334 30.769 0.00 0.00 32.29 2.52
2173 3865 8.770828 TCTGAATTTCTTCTACCAAACGTAAAG 58.229 33.333 0.00 0.00 32.29 1.85
2174 3866 8.665643 TCTGAATTTCTTCTACCAAACGTAAA 57.334 30.769 0.00 0.00 32.29 2.01
2175 3867 7.386848 CCTCTGAATTTCTTCTACCAAACGTAA 59.613 37.037 0.00 0.00 32.29 3.18
2176 3868 6.872020 CCTCTGAATTTCTTCTACCAAACGTA 59.128 38.462 0.00 0.00 32.29 3.57
2177 3869 5.701290 CCTCTGAATTTCTTCTACCAAACGT 59.299 40.000 0.00 0.00 32.29 3.99
2178 3870 5.932303 TCCTCTGAATTTCTTCTACCAAACG 59.068 40.000 0.00 0.00 32.29 3.60
2179 3871 7.745620 TTCCTCTGAATTTCTTCTACCAAAC 57.254 36.000 0.00 0.00 32.29 2.93
2180 3872 7.394359 CCATTCCTCTGAATTTCTTCTACCAAA 59.606 37.037 0.00 0.00 39.20 3.28
2181 3873 6.886459 CCATTCCTCTGAATTTCTTCTACCAA 59.114 38.462 0.00 0.00 39.20 3.67
2182 3874 6.215431 TCCATTCCTCTGAATTTCTTCTACCA 59.785 38.462 0.00 0.00 39.20 3.25
2183 3875 6.653989 TCCATTCCTCTGAATTTCTTCTACC 58.346 40.000 0.00 0.00 39.20 3.18
2184 3876 8.619546 CATTCCATTCCTCTGAATTTCTTCTAC 58.380 37.037 0.00 0.00 39.20 2.59
2185 3877 7.776969 CCATTCCATTCCTCTGAATTTCTTCTA 59.223 37.037 0.00 0.00 39.20 2.10
2186 3878 6.606395 CCATTCCATTCCTCTGAATTTCTTCT 59.394 38.462 0.00 0.00 39.20 2.85
2187 3879 6.604795 TCCATTCCATTCCTCTGAATTTCTTC 59.395 38.462 0.00 0.00 39.20 2.87
2188 3880 6.496743 TCCATTCCATTCCTCTGAATTTCTT 58.503 36.000 0.00 0.00 39.20 2.52
2189 3881 6.083487 TCCATTCCATTCCTCTGAATTTCT 57.917 37.500 0.00 0.00 39.20 2.52
2190 3882 6.973460 ATCCATTCCATTCCTCTGAATTTC 57.027 37.500 0.00 0.00 39.20 2.17
2191 3883 7.356680 TGTATCCATTCCATTCCTCTGAATTT 58.643 34.615 0.00 0.00 39.20 1.82
2192 3884 6.914665 TGTATCCATTCCATTCCTCTGAATT 58.085 36.000 0.00 0.00 39.20 2.17
2193 3885 6.520021 TGTATCCATTCCATTCCTCTGAAT 57.480 37.500 0.00 0.00 41.96 2.57
2194 3886 5.974156 TGTATCCATTCCATTCCTCTGAA 57.026 39.130 0.00 0.00 34.33 3.02
2195 3887 6.520021 AATGTATCCATTCCATTCCTCTGA 57.480 37.500 0.00 0.00 36.56 3.27
2196 3888 6.015688 CCAAATGTATCCATTCCATTCCTCTG 60.016 42.308 0.00 0.00 40.42 3.35
2197 3889 6.073314 CCAAATGTATCCATTCCATTCCTCT 58.927 40.000 0.00 0.00 40.42 3.69
2198 3890 5.244626 CCCAAATGTATCCATTCCATTCCTC 59.755 44.000 0.00 0.00 40.42 3.71
2199 3891 5.149976 CCCAAATGTATCCATTCCATTCCT 58.850 41.667 0.00 0.00 40.42 3.36
2200 3892 4.901250 ACCCAAATGTATCCATTCCATTCC 59.099 41.667 0.00 0.00 40.42 3.01
2201 3893 5.363580 ACACCCAAATGTATCCATTCCATTC 59.636 40.000 0.00 0.00 40.42 2.67
2202 3894 5.279685 ACACCCAAATGTATCCATTCCATT 58.720 37.500 0.00 0.00 40.42 3.16
2203 3895 4.882559 ACACCCAAATGTATCCATTCCAT 58.117 39.130 0.00 0.00 40.42 3.41
2204 3896 4.329638 ACACCCAAATGTATCCATTCCA 57.670 40.909 0.00 0.00 40.42 3.53
2205 3897 5.418676 CAAACACCCAAATGTATCCATTCC 58.581 41.667 0.00 0.00 40.42 3.01
2206 3898 5.046663 ACCAAACACCCAAATGTATCCATTC 60.047 40.000 0.00 0.00 40.42 2.67
2207 3899 4.843516 ACCAAACACCCAAATGTATCCATT 59.156 37.500 0.00 0.00 43.14 3.16
2208 3900 4.424842 ACCAAACACCCAAATGTATCCAT 58.575 39.130 0.00 0.00 30.75 3.41
2209 3901 3.850752 ACCAAACACCCAAATGTATCCA 58.149 40.909 0.00 0.00 30.75 3.41
2210 3902 4.882842 AACCAAACACCCAAATGTATCC 57.117 40.909 0.00 0.00 30.75 2.59
2211 3903 6.763610 TCAAAAACCAAACACCCAAATGTATC 59.236 34.615 0.00 0.00 30.75 2.24
2212 3904 6.653989 TCAAAAACCAAACACCCAAATGTAT 58.346 32.000 0.00 0.00 30.75 2.29
2213 3905 6.049955 TCAAAAACCAAACACCCAAATGTA 57.950 33.333 0.00 0.00 30.75 2.29
2214 3906 4.911390 TCAAAAACCAAACACCCAAATGT 58.089 34.783 0.00 0.00 0.00 2.71
2215 3907 5.181748 TCTCAAAAACCAAACACCCAAATG 58.818 37.500 0.00 0.00 0.00 2.32
2216 3908 5.428184 TCTCAAAAACCAAACACCCAAAT 57.572 34.783 0.00 0.00 0.00 2.32
2217 3909 4.891992 TCTCAAAAACCAAACACCCAAA 57.108 36.364 0.00 0.00 0.00 3.28
2218 3910 4.383552 CCATCTCAAAAACCAAACACCCAA 60.384 41.667 0.00 0.00 0.00 4.12
2219 3911 3.133721 CCATCTCAAAAACCAAACACCCA 59.866 43.478 0.00 0.00 0.00 4.51
2220 3912 3.494223 CCCATCTCAAAAACCAAACACCC 60.494 47.826 0.00 0.00 0.00 4.61
2221 3913 3.386402 TCCCATCTCAAAAACCAAACACC 59.614 43.478 0.00 0.00 0.00 4.16
2222 3914 4.368315 GTCCCATCTCAAAAACCAAACAC 58.632 43.478 0.00 0.00 0.00 3.32
2223 3915 3.067461 CGTCCCATCTCAAAAACCAAACA 59.933 43.478 0.00 0.00 0.00 2.83
2224 3916 3.552068 CCGTCCCATCTCAAAAACCAAAC 60.552 47.826 0.00 0.00 0.00 2.93
2225 3917 2.625790 CCGTCCCATCTCAAAAACCAAA 59.374 45.455 0.00 0.00 0.00 3.28
2226 3918 2.158593 TCCGTCCCATCTCAAAAACCAA 60.159 45.455 0.00 0.00 0.00 3.67
2227 3919 1.422024 TCCGTCCCATCTCAAAAACCA 59.578 47.619 0.00 0.00 0.00 3.67
2228 3920 2.194201 TCCGTCCCATCTCAAAAACC 57.806 50.000 0.00 0.00 0.00 3.27
2229 3921 3.119495 CCATTCCGTCCCATCTCAAAAAC 60.119 47.826 0.00 0.00 0.00 2.43
2230 3922 3.088532 CCATTCCGTCCCATCTCAAAAA 58.911 45.455 0.00 0.00 0.00 1.94
2231 3923 2.307392 TCCATTCCGTCCCATCTCAAAA 59.693 45.455 0.00 0.00 0.00 2.44
2232 3924 1.912731 TCCATTCCGTCCCATCTCAAA 59.087 47.619 0.00 0.00 0.00 2.69
2233 3925 1.578897 TCCATTCCGTCCCATCTCAA 58.421 50.000 0.00 0.00 0.00 3.02
2234 3926 1.806496 ATCCATTCCGTCCCATCTCA 58.194 50.000 0.00 0.00 0.00 3.27
2235 3927 2.938956 AATCCATTCCGTCCCATCTC 57.061 50.000 0.00 0.00 0.00 2.75
2236 3928 5.163099 TGAATAAATCCATTCCGTCCCATCT 60.163 40.000 0.00 0.00 34.59 2.90
2237 3929 5.070001 TGAATAAATCCATTCCGTCCCATC 58.930 41.667 0.00 0.00 34.59 3.51
2238 3930 5.060427 TGAATAAATCCATTCCGTCCCAT 57.940 39.130 0.00 0.00 34.59 4.00
2239 3931 4.511786 TGAATAAATCCATTCCGTCCCA 57.488 40.909 0.00 0.00 34.59 4.37
2240 3932 5.048713 GTGATGAATAAATCCATTCCGTCCC 60.049 44.000 0.00 0.00 34.59 4.46
2241 3933 5.530915 TGTGATGAATAAATCCATTCCGTCC 59.469 40.000 0.00 0.00 34.59 4.79
2242 3934 6.260936 AGTGTGATGAATAAATCCATTCCGTC 59.739 38.462 0.00 0.00 34.59 4.79
2243 3935 6.122277 AGTGTGATGAATAAATCCATTCCGT 58.878 36.000 0.00 0.00 34.59 4.69
2244 3936 6.293626 GGAGTGTGATGAATAAATCCATTCCG 60.294 42.308 0.00 0.00 34.59 4.30
2245 3937 6.774656 AGGAGTGTGATGAATAAATCCATTCC 59.225 38.462 0.00 0.00 35.82 3.01
2246 3938 7.500227 TGAGGAGTGTGATGAATAAATCCATTC 59.500 37.037 0.00 0.00 35.80 2.67
2247 3939 7.348815 TGAGGAGTGTGATGAATAAATCCATT 58.651 34.615 0.00 0.00 0.00 3.16
2248 3940 6.903516 TGAGGAGTGTGATGAATAAATCCAT 58.096 36.000 0.00 0.00 0.00 3.41
2249 3941 6.312141 TGAGGAGTGTGATGAATAAATCCA 57.688 37.500 0.00 0.00 0.00 3.41
2250 3942 7.630242 TTTGAGGAGTGTGATGAATAAATCC 57.370 36.000 0.00 0.00 0.00 3.01
2251 3943 8.680903 ACATTTGAGGAGTGTGATGAATAAATC 58.319 33.333 0.00 0.00 0.00 2.17
2252 3944 8.585471 ACATTTGAGGAGTGTGATGAATAAAT 57.415 30.769 0.00 0.00 0.00 1.40
2253 3945 8.298854 CAACATTTGAGGAGTGTGATGAATAAA 58.701 33.333 0.00 0.00 0.00 1.40
2254 3946 7.665145 TCAACATTTGAGGAGTGTGATGAATAA 59.335 33.333 0.00 0.00 34.08 1.40
2255 3947 7.119699 GTCAACATTTGAGGAGTGTGATGAATA 59.880 37.037 0.00 0.00 41.01 1.75
2256 3948 6.005823 TCAACATTTGAGGAGTGTGATGAAT 58.994 36.000 0.00 0.00 34.08 2.57
2257 3949 5.239306 GTCAACATTTGAGGAGTGTGATGAA 59.761 40.000 0.00 0.00 41.01 2.57
2258 3950 4.756642 GTCAACATTTGAGGAGTGTGATGA 59.243 41.667 0.00 0.00 41.01 2.92
2259 3951 4.516321 TGTCAACATTTGAGGAGTGTGATG 59.484 41.667 0.00 0.00 41.01 3.07
2260 3952 4.717877 TGTCAACATTTGAGGAGTGTGAT 58.282 39.130 0.00 0.00 41.01 3.06
2261 3953 4.149511 TGTCAACATTTGAGGAGTGTGA 57.850 40.909 0.00 0.00 41.01 3.58
2262 3954 4.516321 TGATGTCAACATTTGAGGAGTGTG 59.484 41.667 0.00 0.00 41.01 3.82
2263 3955 4.717877 TGATGTCAACATTTGAGGAGTGT 58.282 39.130 0.00 0.00 41.01 3.55
2264 3956 5.694231 TTGATGTCAACATTTGAGGAGTG 57.306 39.130 0.00 0.00 41.01 3.51
2265 3957 6.906157 ATTTGATGTCAACATTTGAGGAGT 57.094 33.333 0.00 0.00 41.01 3.85
2266 3958 7.819644 TGTATTTGATGTCAACATTTGAGGAG 58.180 34.615 0.00 0.00 41.01 3.69
2267 3959 7.757941 TGTATTTGATGTCAACATTTGAGGA 57.242 32.000 0.00 0.00 41.01 3.71
2268 3960 8.815141 TTTGTATTTGATGTCAACATTTGAGG 57.185 30.769 0.00 0.00 41.01 3.86
2269 3961 9.681692 TCTTTGTATTTGATGTCAACATTTGAG 57.318 29.630 0.00 0.00 41.01 3.02
2272 3964 9.814899 TGTTCTTTGTATTTGATGTCAACATTT 57.185 25.926 0.00 0.00 36.57 2.32
2273 3965 9.248291 GTGTTCTTTGTATTTGATGTCAACATT 57.752 29.630 0.00 0.00 36.57 2.71
2274 3966 8.412456 TGTGTTCTTTGTATTTGATGTCAACAT 58.588 29.630 0.00 0.00 39.70 2.71
2275 3967 7.700234 GTGTGTTCTTTGTATTTGATGTCAACA 59.300 33.333 0.00 0.00 35.28 3.33
2276 3968 7.700234 TGTGTGTTCTTTGTATTTGATGTCAAC 59.300 33.333 0.00 0.00 35.28 3.18
2277 3969 7.766283 TGTGTGTTCTTTGTATTTGATGTCAA 58.234 30.769 0.00 0.00 0.00 3.18
2278 3970 7.326968 TGTGTGTTCTTTGTATTTGATGTCA 57.673 32.000 0.00 0.00 0.00 3.58
2283 3975 8.661257 CCGTATATGTGTGTTCTTTGTATTTGA 58.339 33.333 0.00 0.00 0.00 2.69
2284 3976 8.661257 TCCGTATATGTGTGTTCTTTGTATTTG 58.339 33.333 0.00 0.00 0.00 2.32
2285 3977 8.780846 TCCGTATATGTGTGTTCTTTGTATTT 57.219 30.769 0.00 0.00 0.00 1.40
2286 3978 7.494625 CCTCCGTATATGTGTGTTCTTTGTATT 59.505 37.037 0.00 0.00 0.00 1.89
2287 3979 6.984474 CCTCCGTATATGTGTGTTCTTTGTAT 59.016 38.462 0.00 0.00 0.00 2.29
2288 3980 6.071221 ACCTCCGTATATGTGTGTTCTTTGTA 60.071 38.462 0.00 0.00 0.00 2.41
2289 3981 5.175859 CCTCCGTATATGTGTGTTCTTTGT 58.824 41.667 0.00 0.00 0.00 2.83
2290 3982 5.175859 ACCTCCGTATATGTGTGTTCTTTG 58.824 41.667 0.00 0.00 0.00 2.77
2291 3983 5.416271 ACCTCCGTATATGTGTGTTCTTT 57.584 39.130 0.00 0.00 0.00 2.52
2292 3984 6.534475 TTACCTCCGTATATGTGTGTTCTT 57.466 37.500 0.00 0.00 0.00 2.52
2293 3985 6.534475 TTTACCTCCGTATATGTGTGTTCT 57.466 37.500 0.00 0.00 0.00 3.01
2294 3986 7.599630 TTTTTACCTCCGTATATGTGTGTTC 57.400 36.000 0.00 0.00 0.00 3.18
2315 4007 8.869109 TGAATTTCCTTCCACTACATGATTTTT 58.131 29.630 0.00 0.00 32.49 1.94
2316 4008 8.421249 TGAATTTCCTTCCACTACATGATTTT 57.579 30.769 0.00 0.00 32.49 1.82
2317 4009 7.123247 CCTGAATTTCCTTCCACTACATGATTT 59.877 37.037 0.00 0.00 32.49 2.17
2318 4010 6.604795 CCTGAATTTCCTTCCACTACATGATT 59.395 38.462 0.00 0.00 32.49 2.57
2319 4011 6.069440 TCCTGAATTTCCTTCCACTACATGAT 60.069 38.462 0.00 0.00 32.49 2.45
2320 4012 5.250543 TCCTGAATTTCCTTCCACTACATGA 59.749 40.000 0.00 0.00 32.49 3.07
2321 4013 5.500234 TCCTGAATTTCCTTCCACTACATG 58.500 41.667 0.00 0.00 32.49 3.21
2322 4014 5.339530 CCTCCTGAATTTCCTTCCACTACAT 60.340 44.000 0.00 0.00 32.49 2.29
2323 4015 4.019321 CCTCCTGAATTTCCTTCCACTACA 60.019 45.833 0.00 0.00 32.49 2.74
2324 4016 4.019231 ACCTCCTGAATTTCCTTCCACTAC 60.019 45.833 0.00 0.00 32.49 2.73
2325 4017 4.175962 ACCTCCTGAATTTCCTTCCACTA 58.824 43.478 0.00 0.00 32.49 2.74
2326 4018 2.989571 ACCTCCTGAATTTCCTTCCACT 59.010 45.455 0.00 0.00 32.49 4.00
2327 4019 3.441500 ACCTCCTGAATTTCCTTCCAC 57.558 47.619 0.00 0.00 32.49 4.02
2328 4020 5.592587 TTTACCTCCTGAATTTCCTTCCA 57.407 39.130 0.00 0.00 32.49 3.53
2329 4021 6.911250 TTTTTACCTCCTGAATTTCCTTCC 57.089 37.500 0.00 0.00 32.49 3.46
2349 4041 2.945890 GCGAGATCCCCATCTGGTTTTT 60.946 50.000 0.00 0.00 39.71 1.94
2350 4042 1.408822 GCGAGATCCCCATCTGGTTTT 60.409 52.381 0.00 0.00 39.71 2.43
2351 4043 0.181350 GCGAGATCCCCATCTGGTTT 59.819 55.000 0.00 0.00 39.71 3.27
2352 4044 0.692419 AGCGAGATCCCCATCTGGTT 60.692 55.000 0.00 0.00 39.71 3.67
2353 4045 1.074926 AGCGAGATCCCCATCTGGT 60.075 57.895 0.00 0.00 39.71 4.00
2354 4046 1.370437 CAGCGAGATCCCCATCTGG 59.630 63.158 0.00 0.00 39.71 3.86
2355 4047 1.370437 CCAGCGAGATCCCCATCTG 59.630 63.158 0.00 0.00 39.71 2.90
2356 4048 1.840650 CCCAGCGAGATCCCCATCT 60.841 63.158 0.00 0.00 42.59 2.90
2357 4049 2.746359 CCCAGCGAGATCCCCATC 59.254 66.667 0.00 0.00 0.00 3.51
2358 4050 3.564218 GCCCAGCGAGATCCCCAT 61.564 66.667 0.00 0.00 0.00 4.00
2378 4070 1.461075 CCTCCTCATCCTCCCCAGG 60.461 68.421 0.00 0.00 42.01 4.45
2379 4071 2.146061 GCCTCCTCATCCTCCCCAG 61.146 68.421 0.00 0.00 0.00 4.45
2380 4072 2.040464 GCCTCCTCATCCTCCCCA 60.040 66.667 0.00 0.00 0.00 4.96
2381 4073 3.237741 CGCCTCCTCATCCTCCCC 61.238 72.222 0.00 0.00 0.00 4.81
2382 4074 2.444895 ACGCCTCCTCATCCTCCC 60.445 66.667 0.00 0.00 0.00 4.30
2383 4075 2.503382 GGACGCCTCCTCATCCTCC 61.503 68.421 0.00 0.00 33.07 4.30
2384 4076 1.456705 AGGACGCCTCCTCATCCTC 60.457 63.158 0.00 0.00 44.59 3.71
2385 4077 1.760086 CAGGACGCCTCCTCATCCT 60.760 63.158 0.64 0.00 44.59 3.24
2386 4078 2.801631 CCAGGACGCCTCCTCATCC 61.802 68.421 0.64 0.00 44.59 3.51
2387 4079 2.801631 CCCAGGACGCCTCCTCATC 61.802 68.421 0.64 0.00 44.59 2.92
2388 4080 2.765807 CCCAGGACGCCTCCTCAT 60.766 66.667 0.64 0.00 44.59 2.90
2390 4082 4.779733 TCCCCAGGACGCCTCCTC 62.780 72.222 0.64 0.00 44.59 3.71
2393 4085 4.779733 TCCTCCCCAGGACGCCTC 62.780 72.222 0.00 0.00 44.75 4.70
2400 4092 1.704007 GCCTTCTCATCCTCCCCAGG 61.704 65.000 0.00 0.00 42.01 4.45
2401 4093 1.835693 GCCTTCTCATCCTCCCCAG 59.164 63.158 0.00 0.00 0.00 4.45
2402 4094 2.066393 CGCCTTCTCATCCTCCCCA 61.066 63.158 0.00 0.00 0.00 4.96
2403 4095 2.825264 CGCCTTCTCATCCTCCCC 59.175 66.667 0.00 0.00 0.00 4.81
2404 4096 2.110006 GCGCCTTCTCATCCTCCC 59.890 66.667 0.00 0.00 0.00 4.30
2405 4097 1.227497 CAGCGCCTTCTCATCCTCC 60.227 63.158 2.29 0.00 0.00 4.30
2406 4098 1.886777 GCAGCGCCTTCTCATCCTC 60.887 63.158 2.29 0.00 0.00 3.71
2407 4099 2.188994 GCAGCGCCTTCTCATCCT 59.811 61.111 2.29 0.00 0.00 3.24
2408 4100 2.124983 TGCAGCGCCTTCTCATCC 60.125 61.111 2.29 0.00 0.00 3.51
2409 4101 2.178890 CCTGCAGCGCCTTCTCATC 61.179 63.158 8.66 0.00 0.00 2.92
2410 4102 2.124819 CCTGCAGCGCCTTCTCAT 60.125 61.111 8.66 0.00 0.00 2.90
2430 4122 3.567579 AACACCTCCCCCGTGCATG 62.568 63.158 0.00 0.00 34.45 4.06
2431 4123 3.256960 AACACCTCCCCCGTGCAT 61.257 61.111 0.00 0.00 34.45 3.96
2432 4124 4.263572 CAACACCTCCCCCGTGCA 62.264 66.667 0.00 0.00 34.45 4.57
2433 4125 4.265056 ACAACACCTCCCCCGTGC 62.265 66.667 0.00 0.00 34.45 5.34
2434 4126 2.281484 CACAACACCTCCCCCGTG 60.281 66.667 0.00 0.00 37.26 4.94
2435 4127 2.446994 TCACAACACCTCCCCCGT 60.447 61.111 0.00 0.00 0.00 5.28
2436 4128 2.032071 GTCACAACACCTCCCCCG 59.968 66.667 0.00 0.00 0.00 5.73
2437 4129 1.789576 ATGGTCACAACACCTCCCCC 61.790 60.000 0.00 0.00 37.34 5.40
2438 4130 0.609131 CATGGTCACAACACCTCCCC 60.609 60.000 0.00 0.00 37.34 4.81
2439 4131 0.609131 CCATGGTCACAACACCTCCC 60.609 60.000 2.57 0.00 37.34 4.30
2440 4132 0.609131 CCCATGGTCACAACACCTCC 60.609 60.000 11.73 0.00 37.34 4.30
2441 4133 1.244019 GCCCATGGTCACAACACCTC 61.244 60.000 11.73 0.00 37.34 3.85
2442 4134 1.228552 GCCCATGGTCACAACACCT 60.229 57.895 11.73 0.00 37.34 4.00
2443 4135 2.625823 CGCCCATGGTCACAACACC 61.626 63.158 11.73 0.00 36.90 4.16
2444 4136 2.625823 CCGCCCATGGTCACAACAC 61.626 63.158 11.73 0.00 0.00 3.32
2445 4137 2.282110 CCGCCCATGGTCACAACA 60.282 61.111 11.73 0.00 0.00 3.33
2446 4138 3.061848 CCCGCCCATGGTCACAAC 61.062 66.667 11.73 0.00 0.00 3.32
2447 4139 4.358841 CCCCGCCCATGGTCACAA 62.359 66.667 11.73 0.00 0.00 3.33
2449 4141 4.489771 CTCCCCGCCCATGGTCAC 62.490 72.222 11.73 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.