Multiple sequence alignment - TraesCS7D01G331800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G331800 chr7D 100.000 2480 0 0 1 2480 422951460 422953939 0.000000e+00 4580.0
1 TraesCS7D01G331800 chr7D 80.690 145 22 5 1270 1411 423412577 423412718 9.380000e-20 108.0
2 TraesCS7D01G331800 chr7D 81.148 122 23 0 1261 1382 423404596 423404717 5.640000e-17 99.0
3 TraesCS7D01G331800 chr7A 93.750 1136 39 6 552 1677 510149076 510147963 0.000000e+00 1676.0
4 TraesCS7D01G331800 chr7A 92.281 285 19 3 2197 2480 510147937 510147655 3.840000e-108 401.0
5 TraesCS7D01G331800 chr7A 83.333 126 16 4 1261 1382 509650994 509650870 7.250000e-21 111.0
6 TraesCS7D01G331800 chr7A 80.303 132 22 4 1282 1411 509724509 509724380 2.030000e-16 97.1
7 TraesCS7D01G331800 chr7A 83.168 101 17 0 1282 1382 509760132 509760032 2.630000e-15 93.5
8 TraesCS7D01G331800 chr7A 96.226 53 1 1 51 102 675097215 675097267 4.390000e-13 86.1
9 TraesCS7D01G331800 chr7A 96.000 50 2 0 52 101 494823775 494823824 5.680000e-12 82.4
10 TraesCS7D01G331800 chr7B 90.957 1128 54 17 548 1655 440010367 440011466 0.000000e+00 1474.0
11 TraesCS7D01G331800 chr7B 93.197 294 18 2 1683 1975 440011542 440011834 4.900000e-117 431.0
12 TraesCS7D01G331800 chr7B 91.200 250 20 2 2094 2343 440012063 440012310 3.060000e-89 339.0
13 TraesCS7D01G331800 chr7B 93.548 155 9 1 2326 2480 440012470 440012623 1.920000e-56 230.0
14 TraesCS7D01G331800 chr7B 82.463 268 33 11 284 542 558215875 558216137 3.210000e-54 222.0
15 TraesCS7D01G331800 chr7B 84.000 125 17 2 1261 1382 440332444 440332568 1.560000e-22 117.0
16 TraesCS7D01G331800 chr7B 75.369 203 40 9 1214 1411 440242654 440242851 3.400000e-14 89.8
17 TraesCS7D01G331800 chr7B 96.154 52 2 0 50 101 107986908 107986959 4.390000e-13 86.1
18 TraesCS7D01G331800 chr2D 89.062 192 19 2 92 281 513553209 513553400 1.150000e-58 237.0
19 TraesCS7D01G331800 chr5A 86.316 190 23 3 92 278 352016184 352016373 1.160000e-48 204.0
20 TraesCS7D01G331800 chr5A 84.762 105 13 3 1278 1381 481907437 481907335 4.360000e-18 102.0
21 TraesCS7D01G331800 chr3B 85.567 194 24 4 92 281 172312034 172312227 1.500000e-47 200.0
22 TraesCS7D01G331800 chr3B 86.286 175 22 2 107 279 202607910 202607736 3.260000e-44 189.0
23 TraesCS7D01G331800 chr4B 86.188 181 21 4 104 281 483777174 483777353 2.520000e-45 193.0
24 TraesCS7D01G331800 chr4B 97.959 49 1 0 53 101 30521912 30521864 4.390000e-13 86.1
25 TraesCS7D01G331800 chr3D 86.188 181 22 3 104 281 431223951 431223771 2.520000e-45 193.0
26 TraesCS7D01G331800 chr3D 96.000 50 2 0 52 101 441028747 441028698 5.680000e-12 82.4
27 TraesCS7D01G331800 chr3A 86.592 179 19 5 104 279 589185431 589185255 2.520000e-45 193.0
28 TraesCS7D01G331800 chr1A 85.263 190 25 3 95 281 14166255 14166444 2.520000e-45 193.0
29 TraesCS7D01G331800 chr1A 79.245 265 35 15 288 542 300678045 300677791 1.530000e-37 167.0
30 TraesCS7D01G331800 chr4A 85.556 180 24 2 104 281 737207191 737207012 1.170000e-43 187.0
31 TraesCS7D01G331800 chr4A 96.078 51 2 0 52 102 161175600 161175550 1.580000e-12 84.2
32 TraesCS7D01G331800 chr1D 79.615 260 44 9 288 542 246965220 246965475 7.050000e-41 178.0
33 TraesCS7D01G331800 chr1D 77.656 273 39 12 288 554 490529135 490528879 1.990000e-31 147.0
34 TraesCS7D01G331800 chr2B 80.952 126 19 4 436 560 236865707 236865586 7.300000e-16 95.3
35 TraesCS7D01G331800 chr2B 96.000 50 2 0 52 101 195988313 195988362 5.680000e-12 82.4
36 TraesCS7D01G331800 chr2A 94.444 54 3 0 48 101 293359431 293359378 1.580000e-12 84.2
37 TraesCS7D01G331800 chr5B 94.340 53 3 0 50 102 459194947 459194999 5.680000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G331800 chr7D 422951460 422953939 2479 False 4580.0 4580 100.0000 1 2480 1 chr7D.!!$F1 2479
1 TraesCS7D01G331800 chr7A 510147655 510149076 1421 True 1038.5 1676 93.0155 552 2480 2 chr7A.!!$R4 1928
2 TraesCS7D01G331800 chr7B 440010367 440012623 2256 False 618.5 1474 92.2255 548 2480 4 chr7B.!!$F5 1932

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
330 331 0.034616 TCATGTCATGTCACCACGCA 59.965 50.0 12.54 0.0 0.0 5.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2073 2365 0.248289 GCCAAACGAGGTGCTAGGTA 59.752 55.0 0.0 0.0 0.0 3.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.432628 AGCAAGTGGTAGCGACGC 60.433 61.111 13.03 13.03 35.48 5.19
18 19 2.432628 GCAAGTGGTAGCGACGCT 60.433 61.111 27.45 27.45 43.41 5.07
19 20 1.153901 GCAAGTGGTAGCGACGCTA 60.154 57.895 25.04 25.04 40.44 4.26
20 21 1.140407 GCAAGTGGTAGCGACGCTAG 61.140 60.000 28.90 17.02 42.11 3.42
21 22 0.170561 CAAGTGGTAGCGACGCTAGT 59.829 55.000 28.90 11.17 42.11 2.57
22 23 0.450983 AAGTGGTAGCGACGCTAGTC 59.549 55.000 28.90 22.57 42.11 2.59
33 34 1.299468 CGCTAGTCGTCATGAGGGC 60.299 63.158 12.01 12.01 0.00 5.19
34 35 1.816537 GCTAGTCGTCATGAGGGCA 59.183 57.895 21.04 7.26 0.00 5.36
35 36 0.249238 GCTAGTCGTCATGAGGGCAG 60.249 60.000 21.04 16.00 0.00 4.85
36 37 0.387202 CTAGTCGTCATGAGGGCAGG 59.613 60.000 21.04 9.74 0.00 4.85
37 38 1.043116 TAGTCGTCATGAGGGCAGGG 61.043 60.000 21.04 0.00 0.00 4.45
38 39 3.083349 TCGTCATGAGGGCAGGGG 61.083 66.667 15.05 0.00 0.00 4.79
39 40 4.181010 CGTCATGAGGGCAGGGGG 62.181 72.222 7.54 0.00 0.00 5.40
40 41 4.512914 GTCATGAGGGCAGGGGGC 62.513 72.222 0.00 0.00 43.74 5.80
55 56 4.465512 GGCAGATGCGCGGTGTTG 62.466 66.667 8.83 0.00 43.26 3.33
56 57 3.726517 GCAGATGCGCGGTGTTGT 61.727 61.111 8.83 0.00 0.00 3.32
57 58 2.945984 CAGATGCGCGGTGTTGTT 59.054 55.556 8.83 0.00 0.00 2.83
58 59 1.440850 CAGATGCGCGGTGTTGTTG 60.441 57.895 8.83 0.00 0.00 3.33
59 60 2.126888 GATGCGCGGTGTTGTTGG 60.127 61.111 8.83 0.00 0.00 3.77
60 61 2.593148 ATGCGCGGTGTTGTTGGA 60.593 55.556 8.83 0.00 0.00 3.53
61 62 2.123988 GATGCGCGGTGTTGTTGGAA 62.124 55.000 8.83 0.00 0.00 3.53
62 63 1.729470 ATGCGCGGTGTTGTTGGAAA 61.729 50.000 8.83 0.00 0.00 3.13
63 64 1.007849 GCGCGGTGTTGTTGGAAAT 60.008 52.632 8.83 0.00 0.00 2.17
64 65 0.238817 GCGCGGTGTTGTTGGAAATA 59.761 50.000 8.83 0.00 0.00 1.40
65 66 1.135517 GCGCGGTGTTGTTGGAAATAT 60.136 47.619 8.83 0.00 0.00 1.28
66 67 2.514902 CGCGGTGTTGTTGGAAATATG 58.485 47.619 0.00 0.00 0.00 1.78
67 68 2.258755 GCGGTGTTGTTGGAAATATGC 58.741 47.619 0.00 0.00 0.00 3.14
68 69 2.874849 CGGTGTTGTTGGAAATATGCC 58.125 47.619 0.00 0.00 0.00 4.40
69 70 2.416701 CGGTGTTGTTGGAAATATGCCC 60.417 50.000 0.00 0.00 0.00 5.36
70 71 2.831526 GGTGTTGTTGGAAATATGCCCT 59.168 45.455 0.00 0.00 0.00 5.19
71 72 4.020543 GGTGTTGTTGGAAATATGCCCTA 58.979 43.478 0.00 0.00 0.00 3.53
72 73 4.097892 GGTGTTGTTGGAAATATGCCCTAG 59.902 45.833 0.00 0.00 0.00 3.02
73 74 4.947388 GTGTTGTTGGAAATATGCCCTAGA 59.053 41.667 0.00 0.00 0.00 2.43
74 75 5.066505 GTGTTGTTGGAAATATGCCCTAGAG 59.933 44.000 0.00 0.00 0.00 2.43
75 76 4.437682 TGTTGGAAATATGCCCTAGAGG 57.562 45.455 0.00 0.00 39.47 3.69
92 93 8.140112 CCCTAGAGGCAATACTATTGTATTCT 57.860 38.462 9.25 6.93 44.78 2.40
93 94 8.598041 CCCTAGAGGCAATACTATTGTATTCTT 58.402 37.037 9.25 2.86 44.78 2.52
113 114 8.854614 ATTCTTATATTTCTCCTCCAAATCGG 57.145 34.615 0.00 0.00 0.00 4.18
114 115 7.612065 TCTTATATTTCTCCTCCAAATCGGA 57.388 36.000 0.00 0.00 43.61 4.55
115 116 8.029782 TCTTATATTTCTCCTCCAAATCGGAA 57.970 34.615 0.00 0.00 45.75 4.30
116 117 8.660435 TCTTATATTTCTCCTCCAAATCGGAAT 58.340 33.333 0.00 0.00 45.75 3.01
117 118 8.848474 TTATATTTCTCCTCCAAATCGGAATC 57.152 34.615 0.00 0.00 45.75 2.52
118 119 3.560636 TTCTCCTCCAAATCGGAATCC 57.439 47.619 0.00 0.00 45.75 3.01
119 120 2.477245 TCTCCTCCAAATCGGAATCCA 58.523 47.619 0.00 0.00 45.75 3.41
120 121 3.048600 TCTCCTCCAAATCGGAATCCAT 58.951 45.455 0.00 0.00 45.75 3.41
121 122 3.459598 TCTCCTCCAAATCGGAATCCATT 59.540 43.478 0.00 0.00 45.75 3.16
122 123 3.554934 TCCTCCAAATCGGAATCCATTG 58.445 45.455 0.00 1.40 45.75 2.82
123 124 3.053693 TCCTCCAAATCGGAATCCATTGT 60.054 43.478 0.00 0.00 45.75 2.71
124 125 3.701040 CCTCCAAATCGGAATCCATTGTT 59.299 43.478 0.00 0.00 45.75 2.83
125 126 4.160252 CCTCCAAATCGGAATCCATTGTTT 59.840 41.667 0.00 0.00 45.75 2.83
126 127 5.070770 TCCAAATCGGAATCCATTGTTTG 57.929 39.130 0.00 4.66 42.52 2.93
127 128 4.769488 TCCAAATCGGAATCCATTGTTTGA 59.231 37.500 13.56 0.00 42.52 2.69
128 129 5.244851 TCCAAATCGGAATCCATTGTTTGAA 59.755 36.000 13.56 0.00 42.52 2.69
129 130 5.931146 CCAAATCGGAATCCATTGTTTGAAA 59.069 36.000 13.56 0.00 36.56 2.69
130 131 6.091169 CCAAATCGGAATCCATTGTTTGAAAG 59.909 38.462 13.56 0.00 36.56 2.62
131 132 6.588719 AATCGGAATCCATTGTTTGAAAGA 57.411 33.333 0.00 0.00 0.00 2.52
132 133 6.588719 ATCGGAATCCATTGTTTGAAAGAA 57.411 33.333 0.00 0.00 0.00 2.52
133 134 6.012658 TCGGAATCCATTGTTTGAAAGAAG 57.987 37.500 0.00 0.00 0.00 2.85
134 135 5.767665 TCGGAATCCATTGTTTGAAAGAAGA 59.232 36.000 0.00 0.00 0.00 2.87
135 136 6.264292 TCGGAATCCATTGTTTGAAAGAAGAA 59.736 34.615 0.00 0.00 0.00 2.52
136 137 6.583806 CGGAATCCATTGTTTGAAAGAAGAAG 59.416 38.462 0.00 0.00 0.00 2.85
137 138 6.870439 GGAATCCATTGTTTGAAAGAAGAAGG 59.130 38.462 0.00 0.00 0.00 3.46
138 139 5.789643 TCCATTGTTTGAAAGAAGAAGGG 57.210 39.130 0.00 0.00 35.71 3.95
139 140 5.454062 TCCATTGTTTGAAAGAAGAAGGGA 58.546 37.500 0.00 0.00 39.46 4.20
140 141 6.077322 TCCATTGTTTGAAAGAAGAAGGGAT 58.923 36.000 0.00 0.00 37.68 3.85
141 142 7.237982 TCCATTGTTTGAAAGAAGAAGGGATA 58.762 34.615 0.00 0.00 37.68 2.59
142 143 7.728083 TCCATTGTTTGAAAGAAGAAGGGATAA 59.272 33.333 0.00 0.00 37.68 1.75
143 144 7.814587 CCATTGTTTGAAAGAAGAAGGGATAAC 59.185 37.037 0.00 0.00 36.25 1.89
144 145 8.579863 CATTGTTTGAAAGAAGAAGGGATAACT 58.420 33.333 0.00 0.00 0.00 2.24
145 146 8.533569 TTGTTTGAAAGAAGAAGGGATAACTT 57.466 30.769 0.00 0.00 0.00 2.66
146 147 8.533569 TGTTTGAAAGAAGAAGGGATAACTTT 57.466 30.769 0.00 0.00 0.00 2.66
147 148 8.977412 TGTTTGAAAGAAGAAGGGATAACTTTT 58.023 29.630 0.00 0.00 0.00 2.27
148 149 9.817809 GTTTGAAAGAAGAAGGGATAACTTTTT 57.182 29.630 0.00 0.00 0.00 1.94
167 168 4.857871 TTTTAGCTCCGACAATTCATCG 57.142 40.909 0.00 2.27 39.33 3.84
168 169 3.793797 TTAGCTCCGACAATTCATCGA 57.206 42.857 9.67 0.00 42.25 3.59
169 170 2.672961 AGCTCCGACAATTCATCGAA 57.327 45.000 9.67 0.00 42.25 3.71
170 171 2.271800 AGCTCCGACAATTCATCGAAC 58.728 47.619 9.67 0.59 42.25 3.95
171 172 1.999735 GCTCCGACAATTCATCGAACA 59.000 47.619 9.67 0.00 42.25 3.18
172 173 2.029728 GCTCCGACAATTCATCGAACAG 59.970 50.000 9.67 4.74 42.25 3.16
173 174 3.254060 CTCCGACAATTCATCGAACAGT 58.746 45.455 9.67 0.00 42.25 3.55
174 175 3.659786 TCCGACAATTCATCGAACAGTT 58.340 40.909 9.67 0.00 42.25 3.16
175 176 3.431912 TCCGACAATTCATCGAACAGTTG 59.568 43.478 9.67 0.00 42.25 3.16
176 177 3.155998 CGACAATTCATCGAACAGTTGC 58.844 45.455 3.03 0.00 42.25 4.17
177 178 3.492313 GACAATTCATCGAACAGTTGCC 58.508 45.455 0.00 0.00 0.00 4.52
178 179 2.095768 ACAATTCATCGAACAGTTGCCG 60.096 45.455 0.00 0.00 0.00 5.69
179 180 1.086696 ATTCATCGAACAGTTGCCGG 58.913 50.000 0.00 0.00 0.00 6.13
180 181 0.953471 TTCATCGAACAGTTGCCGGG 60.953 55.000 2.18 0.00 0.00 5.73
181 182 2.746277 ATCGAACAGTTGCCGGGC 60.746 61.111 13.32 13.32 0.00 6.13
182 183 3.545124 ATCGAACAGTTGCCGGGCA 62.545 57.895 19.77 19.77 36.47 5.36
183 184 2.819984 ATCGAACAGTTGCCGGGCAT 62.820 55.000 24.49 7.25 38.76 4.40
184 185 2.568090 GAACAGTTGCCGGGCATG 59.432 61.111 24.49 21.11 38.76 4.06
185 186 2.990967 AACAGTTGCCGGGCATGG 60.991 61.111 24.49 17.05 38.76 3.66
186 187 3.808218 AACAGTTGCCGGGCATGGT 62.808 57.895 24.49 15.42 38.76 3.55
187 188 3.751246 CAGTTGCCGGGCATGGTG 61.751 66.667 24.49 16.11 38.76 4.17
188 189 3.965258 AGTTGCCGGGCATGGTGA 61.965 61.111 24.49 4.01 38.76 4.02
189 190 3.443045 GTTGCCGGGCATGGTGAG 61.443 66.667 24.49 0.00 38.76 3.51
190 191 3.965258 TTGCCGGGCATGGTGAGT 61.965 61.111 24.49 0.00 38.76 3.41
191 192 2.597818 TTGCCGGGCATGGTGAGTA 61.598 57.895 24.49 1.38 38.76 2.59
192 193 1.920734 TTGCCGGGCATGGTGAGTAT 61.921 55.000 24.49 0.00 38.76 2.12
193 194 1.051556 TGCCGGGCATGGTGAGTATA 61.052 55.000 19.77 0.00 31.71 1.47
194 195 0.320771 GCCGGGCATGGTGAGTATAG 60.321 60.000 15.62 0.00 0.00 1.31
195 196 0.320771 CCGGGCATGGTGAGTATAGC 60.321 60.000 0.00 0.00 0.00 2.97
196 197 0.392706 CGGGCATGGTGAGTATAGCA 59.607 55.000 0.00 0.00 0.00 3.49
197 198 1.606480 CGGGCATGGTGAGTATAGCAG 60.606 57.143 0.00 0.00 0.00 4.24
198 199 1.417890 GGGCATGGTGAGTATAGCAGT 59.582 52.381 0.00 0.00 0.00 4.40
199 200 2.632996 GGGCATGGTGAGTATAGCAGTA 59.367 50.000 0.00 0.00 0.00 2.74
200 201 3.306364 GGGCATGGTGAGTATAGCAGTAG 60.306 52.174 0.00 0.00 0.00 2.57
201 202 3.321497 GCATGGTGAGTATAGCAGTAGC 58.679 50.000 0.00 0.00 42.56 3.58
202 203 3.243873 GCATGGTGAGTATAGCAGTAGCA 60.244 47.826 0.00 0.00 45.49 3.49
203 204 4.740634 GCATGGTGAGTATAGCAGTAGCAA 60.741 45.833 0.00 0.00 45.49 3.91
204 205 5.359756 CATGGTGAGTATAGCAGTAGCAAA 58.640 41.667 0.00 0.00 45.49 3.68
205 206 5.614324 TGGTGAGTATAGCAGTAGCAAAT 57.386 39.130 0.00 0.00 45.49 2.32
206 207 5.359756 TGGTGAGTATAGCAGTAGCAAATG 58.640 41.667 0.00 0.00 45.49 2.32
207 208 4.752101 GGTGAGTATAGCAGTAGCAAATGG 59.248 45.833 0.00 0.00 45.49 3.16
208 209 5.360591 GTGAGTATAGCAGTAGCAAATGGT 58.639 41.667 0.00 0.00 45.49 3.55
209 210 6.462487 GGTGAGTATAGCAGTAGCAAATGGTA 60.462 42.308 0.00 0.00 45.49 3.25
210 211 6.421202 GTGAGTATAGCAGTAGCAAATGGTAC 59.579 42.308 13.43 13.43 46.22 3.34
211 212 5.855045 AGTATAGCAGTAGCAAATGGTACC 58.145 41.667 16.70 4.43 46.84 3.34
212 213 5.602978 AGTATAGCAGTAGCAAATGGTACCT 59.397 40.000 14.36 11.29 46.84 3.08
213 214 2.991250 AGCAGTAGCAAATGGTACCTG 58.009 47.619 14.36 14.68 46.84 4.00
214 215 2.017049 GCAGTAGCAAATGGTACCTGG 58.983 52.381 14.36 9.66 46.84 4.45
215 216 2.017049 CAGTAGCAAATGGTACCTGGC 58.983 52.381 14.36 11.09 46.84 4.85
216 217 1.014352 GTAGCAAATGGTACCTGGCG 58.986 55.000 14.36 0.44 41.66 5.69
217 218 0.107410 TAGCAAATGGTACCTGGCGG 60.107 55.000 14.36 0.17 0.00 6.13
218 219 2.414785 GCAAATGGTACCTGGCGGG 61.415 63.158 14.36 11.83 41.89 6.13
219 220 1.301623 CAAATGGTACCTGGCGGGA 59.698 57.895 21.81 0.00 38.76 5.14
220 221 0.106719 CAAATGGTACCTGGCGGGAT 60.107 55.000 21.81 6.00 38.76 3.85
221 222 0.106719 AAATGGTACCTGGCGGGATG 60.107 55.000 21.81 0.00 38.76 3.51
222 223 1.994885 AATGGTACCTGGCGGGATGG 61.995 60.000 21.81 0.00 38.76 3.51
223 224 3.087906 GGTACCTGGCGGGATGGT 61.088 66.667 21.81 5.28 38.76 3.55
224 225 2.504519 GTACCTGGCGGGATGGTC 59.495 66.667 21.81 0.39 38.76 4.02
225 226 3.151710 TACCTGGCGGGATGGTCG 61.152 66.667 21.81 0.00 38.76 4.79
228 229 4.227134 CTGGCGGGATGGTCGGAG 62.227 72.222 0.00 0.00 0.00 4.63
231 232 3.917760 GCGGGATGGTCGGAGGAG 61.918 72.222 0.00 0.00 0.00 3.69
232 233 2.123854 CGGGATGGTCGGAGGAGA 60.124 66.667 0.00 0.00 0.00 3.71
233 234 2.196925 CGGGATGGTCGGAGGAGAG 61.197 68.421 0.00 0.00 0.00 3.20
234 235 1.834822 GGGATGGTCGGAGGAGAGG 60.835 68.421 0.00 0.00 0.00 3.69
235 236 1.834822 GGATGGTCGGAGGAGAGGG 60.835 68.421 0.00 0.00 0.00 4.30
236 237 1.834822 GATGGTCGGAGGAGAGGGG 60.835 68.421 0.00 0.00 0.00 4.79
237 238 2.591193 GATGGTCGGAGGAGAGGGGT 62.591 65.000 0.00 0.00 0.00 4.95
238 239 2.039137 GGTCGGAGGAGAGGGGTT 59.961 66.667 0.00 0.00 0.00 4.11
239 240 2.359967 GGTCGGAGGAGAGGGGTTG 61.360 68.421 0.00 0.00 0.00 3.77
240 241 1.305046 GTCGGAGGAGAGGGGTTGA 60.305 63.158 0.00 0.00 0.00 3.18
241 242 0.903454 GTCGGAGGAGAGGGGTTGAA 60.903 60.000 0.00 0.00 0.00 2.69
242 243 0.042731 TCGGAGGAGAGGGGTTGAAT 59.957 55.000 0.00 0.00 0.00 2.57
243 244 0.179000 CGGAGGAGAGGGGTTGAATG 59.821 60.000 0.00 0.00 0.00 2.67
244 245 0.106967 GGAGGAGAGGGGTTGAATGC 60.107 60.000 0.00 0.00 0.00 3.56
245 246 0.106967 GAGGAGAGGGGTTGAATGCC 60.107 60.000 0.00 0.00 0.00 4.40
246 247 0.846427 AGGAGAGGGGTTGAATGCCA 60.846 55.000 0.00 0.00 0.00 4.92
247 248 0.681243 GGAGAGGGGTTGAATGCCAC 60.681 60.000 0.00 0.00 0.00 5.01
248 249 1.002134 AGAGGGGTTGAATGCCACG 60.002 57.895 0.00 0.00 33.85 4.94
249 250 2.035626 AGGGGTTGAATGCCACGG 59.964 61.111 0.00 0.00 33.85 4.94
250 251 2.034999 GGGGTTGAATGCCACGGA 59.965 61.111 0.00 0.00 0.00 4.69
251 252 2.046285 GGGGTTGAATGCCACGGAG 61.046 63.158 0.00 0.00 0.00 4.63
252 253 2.046285 GGGTTGAATGCCACGGAGG 61.046 63.158 0.00 0.00 41.84 4.30
253 254 1.002624 GGTTGAATGCCACGGAGGA 60.003 57.895 0.00 0.00 41.22 3.71
254 255 1.026718 GGTTGAATGCCACGGAGGAG 61.027 60.000 0.00 0.00 41.22 3.69
255 256 0.036388 GTTGAATGCCACGGAGGAGA 60.036 55.000 0.00 0.00 41.22 3.71
256 257 0.690192 TTGAATGCCACGGAGGAGAA 59.310 50.000 0.00 0.00 41.22 2.87
257 258 0.250234 TGAATGCCACGGAGGAGAAG 59.750 55.000 0.00 0.00 41.22 2.85
258 259 1.078143 AATGCCACGGAGGAGAAGC 60.078 57.895 0.00 0.00 41.22 3.86
259 260 2.859273 AATGCCACGGAGGAGAAGCG 62.859 60.000 0.00 0.00 41.22 4.68
260 261 4.821589 GCCACGGAGGAGAAGCGG 62.822 72.222 0.00 0.00 41.22 5.52
261 262 3.382832 CCACGGAGGAGAAGCGGT 61.383 66.667 0.00 0.00 41.22 5.68
262 263 2.125912 CACGGAGGAGAAGCGGTG 60.126 66.667 0.00 0.00 0.00 4.94
263 264 2.600769 ACGGAGGAGAAGCGGTGT 60.601 61.111 0.00 0.00 0.00 4.16
264 265 2.125912 CGGAGGAGAAGCGGTGTG 60.126 66.667 0.00 0.00 0.00 3.82
265 266 2.266055 GGAGGAGAAGCGGTGTGG 59.734 66.667 0.00 0.00 0.00 4.17
266 267 2.283529 GGAGGAGAAGCGGTGTGGA 61.284 63.158 0.00 0.00 0.00 4.02
267 268 1.216710 GAGGAGAAGCGGTGTGGAG 59.783 63.158 0.00 0.00 0.00 3.86
268 269 1.534235 AGGAGAAGCGGTGTGGAGT 60.534 57.895 0.00 0.00 0.00 3.85
269 270 1.079750 GGAGAAGCGGTGTGGAGTC 60.080 63.158 0.00 0.00 0.00 3.36
270 271 1.444553 GAGAAGCGGTGTGGAGTCG 60.445 63.158 0.00 0.00 0.00 4.18
271 272 2.432628 GAAGCGGTGTGGAGTCGG 60.433 66.667 0.00 0.00 0.00 4.79
272 273 4.681978 AAGCGGTGTGGAGTCGGC 62.682 66.667 0.00 0.00 0.00 5.54
275 276 4.742201 CGGTGTGGAGTCGGCTGG 62.742 72.222 0.00 0.00 0.00 4.85
276 277 3.311110 GGTGTGGAGTCGGCTGGA 61.311 66.667 0.00 0.00 0.00 3.86
277 278 2.741092 GTGTGGAGTCGGCTGGAA 59.259 61.111 0.00 0.00 0.00 3.53
278 279 1.668151 GTGTGGAGTCGGCTGGAAC 60.668 63.158 0.00 0.00 0.00 3.62
279 280 2.432628 GTGGAGTCGGCTGGAACG 60.433 66.667 0.00 0.00 0.00 3.95
280 281 4.373116 TGGAGTCGGCTGGAACGC 62.373 66.667 0.00 0.00 0.00 4.84
281 282 4.373116 GGAGTCGGCTGGAACGCA 62.373 66.667 0.00 0.00 0.00 5.24
282 283 2.811317 GAGTCGGCTGGAACGCAG 60.811 66.667 0.00 0.00 0.00 5.18
284 285 3.414700 GTCGGCTGGAACGCAGTG 61.415 66.667 0.00 0.00 45.00 3.66
285 286 3.923864 TCGGCTGGAACGCAGTGT 61.924 61.111 0.00 0.00 45.00 3.55
286 287 2.972505 CGGCTGGAACGCAGTGTT 60.973 61.111 0.00 0.00 45.00 3.32
295 296 1.021968 AACGCAGTGTTCACTTTCCC 58.978 50.000 2.47 0.00 45.00 3.97
296 297 0.180406 ACGCAGTGTTCACTTTCCCT 59.820 50.000 2.47 0.00 42.51 4.20
297 298 1.414919 ACGCAGTGTTCACTTTCCCTA 59.585 47.619 2.47 0.00 42.51 3.53
298 299 1.798813 CGCAGTGTTCACTTTCCCTAC 59.201 52.381 2.47 0.00 0.00 3.18
299 300 2.548067 CGCAGTGTTCACTTTCCCTACT 60.548 50.000 2.47 0.00 0.00 2.57
300 301 3.305813 CGCAGTGTTCACTTTCCCTACTA 60.306 47.826 2.47 0.00 0.00 1.82
301 302 4.638304 GCAGTGTTCACTTTCCCTACTAA 58.362 43.478 2.47 0.00 0.00 2.24
302 303 5.061179 GCAGTGTTCACTTTCCCTACTAAA 58.939 41.667 2.47 0.00 0.00 1.85
303 304 5.705905 GCAGTGTTCACTTTCCCTACTAAAT 59.294 40.000 2.47 0.00 0.00 1.40
304 305 6.348540 GCAGTGTTCACTTTCCCTACTAAATG 60.349 42.308 2.47 0.00 0.00 2.32
305 306 6.710744 CAGTGTTCACTTTCCCTACTAAATGT 59.289 38.462 2.47 0.00 0.00 2.71
306 307 7.228706 CAGTGTTCACTTTCCCTACTAAATGTT 59.771 37.037 2.47 0.00 0.00 2.71
307 308 7.228706 AGTGTTCACTTTCCCTACTAAATGTTG 59.771 37.037 0.00 0.00 0.00 3.33
308 309 7.012989 GTGTTCACTTTCCCTACTAAATGTTGT 59.987 37.037 0.00 0.00 0.00 3.32
309 310 7.558444 TGTTCACTTTCCCTACTAAATGTTGTT 59.442 33.333 0.00 0.00 0.00 2.83
310 311 8.410912 GTTCACTTTCCCTACTAAATGTTGTTT 58.589 33.333 0.00 0.00 0.00 2.83
311 312 8.528044 TCACTTTCCCTACTAAATGTTGTTTT 57.472 30.769 0.00 0.00 0.00 2.43
312 313 8.626526 TCACTTTCCCTACTAAATGTTGTTTTC 58.373 33.333 0.00 0.00 0.00 2.29
313 314 8.410141 CACTTTCCCTACTAAATGTTGTTTTCA 58.590 33.333 0.00 0.00 0.00 2.69
314 315 9.143155 ACTTTCCCTACTAAATGTTGTTTTCAT 57.857 29.630 0.00 0.00 0.00 2.57
315 316 9.410556 CTTTCCCTACTAAATGTTGTTTTCATG 57.589 33.333 0.00 0.00 0.00 3.07
316 317 8.472007 TTCCCTACTAAATGTTGTTTTCATGT 57.528 30.769 0.00 0.00 0.00 3.21
317 318 8.106247 TCCCTACTAAATGTTGTTTTCATGTC 57.894 34.615 0.00 0.00 0.00 3.06
318 319 7.721842 TCCCTACTAAATGTTGTTTTCATGTCA 59.278 33.333 0.00 0.00 0.00 3.58
319 320 8.522830 CCCTACTAAATGTTGTTTTCATGTCAT 58.477 33.333 0.00 0.00 0.00 3.06
320 321 9.345517 CCTACTAAATGTTGTTTTCATGTCATG 57.654 33.333 6.47 6.47 0.00 3.07
321 322 9.897744 CTACTAAATGTTGTTTTCATGTCATGT 57.102 29.630 12.54 0.00 0.00 3.21
322 323 8.801715 ACTAAATGTTGTTTTCATGTCATGTC 57.198 30.769 12.54 3.62 0.00 3.06
323 324 8.412456 ACTAAATGTTGTTTTCATGTCATGTCA 58.588 29.630 12.54 0.00 0.00 3.58
324 325 7.467557 AAATGTTGTTTTCATGTCATGTCAC 57.532 32.000 12.54 8.36 0.00 3.67
325 326 4.930963 TGTTGTTTTCATGTCATGTCACC 58.069 39.130 12.54 1.45 0.00 4.02
326 327 4.400567 TGTTGTTTTCATGTCATGTCACCA 59.599 37.500 12.54 3.83 0.00 4.17
327 328 4.566545 TGTTTTCATGTCATGTCACCAC 57.433 40.909 12.54 4.99 0.00 4.16
328 329 3.003171 TGTTTTCATGTCATGTCACCACG 59.997 43.478 12.54 0.00 0.00 4.94
329 330 1.155889 TTCATGTCATGTCACCACGC 58.844 50.000 12.54 0.00 0.00 5.34
330 331 0.034616 TCATGTCATGTCACCACGCA 59.965 50.000 12.54 0.00 0.00 5.24
331 332 1.089112 CATGTCATGTCACCACGCAT 58.911 50.000 4.53 0.00 0.00 4.73
332 333 2.093764 TCATGTCATGTCACCACGCATA 60.094 45.455 12.54 0.00 0.00 3.14
333 334 2.689553 TGTCATGTCACCACGCATAT 57.310 45.000 0.00 0.00 0.00 1.78
334 335 3.810310 TGTCATGTCACCACGCATATA 57.190 42.857 0.00 0.00 0.00 0.86
335 336 4.335400 TGTCATGTCACCACGCATATAT 57.665 40.909 0.00 0.00 0.00 0.86
336 337 5.461032 TGTCATGTCACCACGCATATATA 57.539 39.130 0.00 0.00 0.00 0.86
337 338 6.036577 TGTCATGTCACCACGCATATATAT 57.963 37.500 0.00 0.00 0.00 0.86
338 339 6.463360 TGTCATGTCACCACGCATATATATT 58.537 36.000 0.00 0.00 0.00 1.28
339 340 6.368516 TGTCATGTCACCACGCATATATATTG 59.631 38.462 0.00 0.00 0.00 1.90
340 341 6.368791 GTCATGTCACCACGCATATATATTGT 59.631 38.462 0.00 0.00 0.00 2.71
341 342 6.934083 TCATGTCACCACGCATATATATTGTT 59.066 34.615 0.00 0.00 0.00 2.83
342 343 8.091449 TCATGTCACCACGCATATATATTGTTA 58.909 33.333 0.00 0.00 0.00 2.41
343 344 8.716909 CATGTCACCACGCATATATATTGTTAA 58.283 33.333 0.00 0.00 0.00 2.01
344 345 8.078959 TGTCACCACGCATATATATTGTTAAC 57.921 34.615 0.00 0.00 0.00 2.01
345 346 7.711339 TGTCACCACGCATATATATTGTTAACA 59.289 33.333 3.59 3.59 0.00 2.41
346 347 8.552865 GTCACCACGCATATATATTGTTAACAA 58.447 33.333 22.58 22.58 40.51 2.83
347 348 9.110502 TCACCACGCATATATATTGTTAACAAA 57.889 29.630 23.97 13.85 39.55 2.83
348 349 9.891828 CACCACGCATATATATTGTTAACAAAT 57.108 29.630 23.97 18.84 39.55 2.32
383 384 7.936496 AAAAATCACACTCATTTTGGGTTTT 57.064 28.000 0.00 0.00 34.39 2.43
384 385 7.936496 AAAATCACACTCATTTTGGGTTTTT 57.064 28.000 0.00 0.00 33.17 1.94
486 487 8.973835 TGTTTCATAAAGTTTCTCGTGTTTTT 57.026 26.923 0.00 0.00 0.00 1.94
524 525 9.685828 TTATTTGTTAATAGTTCCTGCAACAAC 57.314 29.630 0.00 0.00 36.07 3.32
525 526 5.351233 TGTTAATAGTTCCTGCAACAACG 57.649 39.130 0.00 0.00 37.48 4.10
526 527 2.989422 AATAGTTCCTGCAACAACGC 57.011 45.000 0.00 0.00 37.48 4.84
527 528 1.890876 ATAGTTCCTGCAACAACGCA 58.109 45.000 0.00 0.00 40.32 5.24
528 529 0.941542 TAGTTCCTGCAACAACGCAC 59.058 50.000 0.00 0.00 36.86 5.34
529 530 1.029408 AGTTCCTGCAACAACGCACA 61.029 50.000 0.00 0.00 36.86 4.57
530 531 0.592247 GTTCCTGCAACAACGCACAG 60.592 55.000 0.00 0.00 36.86 3.66
531 532 2.332514 CCTGCAACAACGCACAGG 59.667 61.111 0.00 0.00 43.45 4.00
532 533 2.332514 CTGCAACAACGCACAGGG 59.667 61.111 0.00 0.00 36.86 4.45
533 534 2.439338 TGCAACAACGCACAGGGT 60.439 55.556 0.00 0.00 36.86 4.34
534 535 1.153147 TGCAACAACGCACAGGGTA 60.153 52.632 0.00 0.00 36.86 3.69
535 536 0.536233 TGCAACAACGCACAGGGTAT 60.536 50.000 0.00 0.00 36.86 2.73
536 537 0.168128 GCAACAACGCACAGGGTATC 59.832 55.000 0.00 0.00 0.00 2.24
537 538 1.518325 CAACAACGCACAGGGTATCA 58.482 50.000 0.00 0.00 0.00 2.15
538 539 2.083774 CAACAACGCACAGGGTATCAT 58.916 47.619 0.00 0.00 0.00 2.45
539 540 2.024176 ACAACGCACAGGGTATCATC 57.976 50.000 0.00 0.00 0.00 2.92
540 541 1.555075 ACAACGCACAGGGTATCATCT 59.445 47.619 0.00 0.00 0.00 2.90
541 542 2.764010 ACAACGCACAGGGTATCATCTA 59.236 45.455 0.00 0.00 0.00 1.98
542 543 3.196901 ACAACGCACAGGGTATCATCTAA 59.803 43.478 0.00 0.00 0.00 2.10
543 544 4.141711 ACAACGCACAGGGTATCATCTAAT 60.142 41.667 0.00 0.00 0.00 1.73
544 545 5.069914 ACAACGCACAGGGTATCATCTAATA 59.930 40.000 0.00 0.00 0.00 0.98
545 546 5.392767 ACGCACAGGGTATCATCTAATAG 57.607 43.478 0.00 0.00 0.00 1.73
546 547 4.833380 ACGCACAGGGTATCATCTAATAGT 59.167 41.667 0.00 0.00 0.00 2.12
574 575 3.575965 AATGGCAAAGCTTTTACCTCG 57.424 42.857 22.50 8.21 0.00 4.63
717 721 8.868635 ACAAAGTGTCTGTTACTACTAAACTC 57.131 34.615 0.00 0.00 0.00 3.01
718 722 7.646922 ACAAAGTGTCTGTTACTACTAAACTCG 59.353 37.037 0.00 0.00 0.00 4.18
719 723 6.874288 AGTGTCTGTTACTACTAAACTCGT 57.126 37.500 0.00 0.00 0.00 4.18
720 724 7.969536 AGTGTCTGTTACTACTAAACTCGTA 57.030 36.000 0.00 0.00 0.00 3.43
721 725 8.383318 AGTGTCTGTTACTACTAAACTCGTAA 57.617 34.615 0.00 0.00 0.00 3.18
722 726 9.007901 AGTGTCTGTTACTACTAAACTCGTAAT 57.992 33.333 0.00 0.00 0.00 1.89
738 742 8.594881 AACTCGTAATAATTGATGTCATCTCC 57.405 34.615 13.90 0.00 0.00 3.71
767 771 4.345257 GGTAAACTCTCCTCCTCATGCATA 59.655 45.833 0.00 0.00 0.00 3.14
808 819 9.890629 ATCTAGTACAAGTCAATGCTAAATTGA 57.109 29.630 0.00 0.00 35.86 2.57
860 871 3.004734 GCAACACTAGAAAATGCACCAGT 59.995 43.478 0.00 0.00 37.00 4.00
890 902 1.187087 CCCTCTACCCATATCTCGGC 58.813 60.000 0.00 0.00 0.00 5.54
977 995 1.305930 GCCGGCGAAAGTCTTCCAAT 61.306 55.000 12.58 0.00 0.00 3.16
1074 1092 3.758554 CCAACAAAGGGACGATGATCTTT 59.241 43.478 0.00 0.00 0.00 2.52
1143 1161 3.580458 TCTTCTTCTTCTGCTACCAGCTT 59.420 43.478 0.00 0.00 42.97 3.74
1146 1164 0.532573 TCTTCTGCTACCAGCTTCGG 59.467 55.000 0.00 0.00 42.97 4.30
1263 1281 4.335647 CACAGCGGCAAGGAGGGT 62.336 66.667 1.45 0.00 0.00 4.34
1483 1501 1.758906 GAGCTTCCGGTCTAGGGCT 60.759 63.158 0.00 3.32 34.86 5.19
1555 1573 0.951040 AGCTTGTCGCCTGTGTTAGC 60.951 55.000 0.00 0.00 40.39 3.09
1609 1633 4.755411 TGCCTCCGTATACAGAGAAAAAG 58.245 43.478 16.28 2.13 31.43 2.27
1677 1702 6.869913 TGTACTACAATTAACGTTCTCCCTTG 59.130 38.462 2.82 5.46 0.00 3.61
1679 1704 6.164176 ACTACAATTAACGTTCTCCCTTGAG 58.836 40.000 2.82 5.47 40.17 3.02
1680 1705 3.751698 ACAATTAACGTTCTCCCTTGAGC 59.248 43.478 2.82 0.00 38.58 4.26
1681 1706 2.074547 TTAACGTTCTCCCTTGAGCG 57.925 50.000 2.82 0.00 44.22 5.03
1682 1707 3.456317 ACGTTCTCCCTTGAGCGT 58.544 55.556 0.94 0.94 46.04 5.07
1684 1709 3.031660 CGTTCTCCCTTGAGCGTAC 57.968 57.895 0.00 0.00 38.58 3.67
1699 1781 7.095187 CCTTGAGCGTACAAGTTTCTAAATTCT 60.095 37.037 17.38 0.00 43.72 2.40
1702 1784 7.656137 TGAGCGTACAAGTTTCTAAATTCTTCT 59.344 33.333 0.00 0.00 0.00 2.85
1704 1786 7.441458 AGCGTACAAGTTTCTAAATTCTTCTGT 59.559 33.333 0.00 0.00 0.00 3.41
1768 1850 6.968335 TGCATCATCTAATTCAATTTGACACG 59.032 34.615 0.00 0.00 0.00 4.49
1769 1851 6.075205 GCATCATCTAATTCAATTTGACACGC 60.075 38.462 0.00 0.00 0.00 5.34
1783 1865 2.271800 GACACGCCTGATCGATCTTTT 58.728 47.619 25.02 3.68 0.00 2.27
1790 1872 6.420903 CACGCCTGATCGATCTTTTAATTCTA 59.579 38.462 25.02 1.00 0.00 2.10
1820 1902 1.817520 CCGGCCGTATGATTGCACA 60.818 57.895 26.12 0.00 0.00 4.57
1869 1951 9.846248 AAAAATGCACTATCACTATTTCAAGTC 57.154 29.630 0.00 0.00 0.00 3.01
1985 2277 4.260538 CGAGCAGGCAAATTCTCTAACATC 60.261 45.833 0.00 0.00 0.00 3.06
1987 2279 5.198965 AGCAGGCAAATTCTCTAACATCAT 58.801 37.500 0.00 0.00 0.00 2.45
1989 2281 6.154021 AGCAGGCAAATTCTCTAACATCATTT 59.846 34.615 0.00 0.00 0.00 2.32
1990 2282 7.340232 AGCAGGCAAATTCTCTAACATCATTTA 59.660 33.333 0.00 0.00 0.00 1.40
2007 2299 9.165035 ACATCATTTAATAAAAATTGCAGTGGG 57.835 29.630 0.00 0.00 0.00 4.61
2008 2300 8.614346 CATCATTTAATAAAAATTGCAGTGGGG 58.386 33.333 0.00 0.00 0.00 4.96
2009 2301 6.597280 TCATTTAATAAAAATTGCAGTGGGGC 59.403 34.615 0.00 0.00 0.00 5.80
2010 2302 3.348647 AATAAAAATTGCAGTGGGGCC 57.651 42.857 0.00 0.00 0.00 5.80
2011 2303 2.022718 TAAAAATTGCAGTGGGGCCT 57.977 45.000 0.84 0.00 0.00 5.19
2012 2304 1.139439 AAAAATTGCAGTGGGGCCTT 58.861 45.000 0.84 0.00 0.00 4.35
2013 2305 0.397564 AAAATTGCAGTGGGGCCTTG 59.602 50.000 0.84 0.79 0.00 3.61
2014 2306 2.115734 AAATTGCAGTGGGGCCTTGC 62.116 55.000 17.32 17.32 38.30 4.01
2024 2316 2.757077 GGCCTTGCCCTACTGTGT 59.243 61.111 0.00 0.00 44.06 3.72
2025 2317 1.988015 GGCCTTGCCCTACTGTGTA 59.012 57.895 0.00 0.00 44.06 2.90
2026 2318 0.392595 GGCCTTGCCCTACTGTGTAC 60.393 60.000 0.00 0.00 44.06 2.90
2027 2319 0.323629 GCCTTGCCCTACTGTGTACA 59.676 55.000 0.00 0.00 0.00 2.90
2028 2320 4.886351 GGCCTTGCCCTACTGTGTACAG 62.886 59.091 10.33 10.33 45.40 2.74
2029 2321 1.899814 CCTTGCCCTACTGTGTACAGA 59.100 52.381 18.18 0.00 46.59 3.41
2030 2322 2.353803 CCTTGCCCTACTGTGTACAGAC 60.354 54.545 18.18 3.65 46.59 3.51
2031 2323 2.003937 TGCCCTACTGTGTACAGACA 57.996 50.000 18.18 5.22 46.59 3.41
2032 2324 2.321719 TGCCCTACTGTGTACAGACAA 58.678 47.619 18.18 3.30 46.59 3.18
2033 2325 2.701423 TGCCCTACTGTGTACAGACAAA 59.299 45.455 18.18 1.10 46.59 2.83
2034 2326 3.134985 TGCCCTACTGTGTACAGACAAAA 59.865 43.478 18.18 0.00 46.59 2.44
2035 2327 4.131596 GCCCTACTGTGTACAGACAAAAA 58.868 43.478 18.18 0.00 46.59 1.94
2062 2354 9.701098 AAAAAGTCTAACATCGACTACATTACA 57.299 29.630 0.00 0.00 40.65 2.41
2063 2355 8.912787 AAAGTCTAACATCGACTACATTACAG 57.087 34.615 0.00 0.00 40.65 2.74
2064 2356 7.627298 AGTCTAACATCGACTACATTACAGT 57.373 36.000 0.00 0.00 39.80 3.55
2065 2357 8.053026 AGTCTAACATCGACTACATTACAGTT 57.947 34.615 0.00 0.00 39.80 3.16
2066 2358 8.182881 AGTCTAACATCGACTACATTACAGTTC 58.817 37.037 0.00 0.00 39.80 3.01
2067 2359 7.431668 GTCTAACATCGACTACATTACAGTTCC 59.568 40.741 0.00 0.00 0.00 3.62
2068 2360 5.654603 ACATCGACTACATTACAGTTCCA 57.345 39.130 0.00 0.00 0.00 3.53
2069 2361 6.222038 ACATCGACTACATTACAGTTCCAT 57.778 37.500 0.00 0.00 0.00 3.41
2070 2362 7.342769 ACATCGACTACATTACAGTTCCATA 57.657 36.000 0.00 0.00 0.00 2.74
2071 2363 7.952671 ACATCGACTACATTACAGTTCCATAT 58.047 34.615 0.00 0.00 0.00 1.78
2072 2364 8.082852 ACATCGACTACATTACAGTTCCATATC 58.917 37.037 0.00 0.00 0.00 1.63
2073 2365 7.818997 TCGACTACATTACAGTTCCATATCT 57.181 36.000 0.00 0.00 0.00 1.98
2074 2366 8.913487 TCGACTACATTACAGTTCCATATCTA 57.087 34.615 0.00 0.00 0.00 1.98
2075 2367 8.781196 TCGACTACATTACAGTTCCATATCTAC 58.219 37.037 0.00 0.00 0.00 2.59
2076 2368 8.021973 CGACTACATTACAGTTCCATATCTACC 58.978 40.741 0.00 0.00 0.00 3.18
2077 2369 9.080097 GACTACATTACAGTTCCATATCTACCT 57.920 37.037 0.00 0.00 0.00 3.08
2080 2372 7.897864 ACATTACAGTTCCATATCTACCTAGC 58.102 38.462 0.00 0.00 0.00 3.42
2081 2373 7.509318 ACATTACAGTTCCATATCTACCTAGCA 59.491 37.037 0.00 0.00 0.00 3.49
2082 2374 5.793030 ACAGTTCCATATCTACCTAGCAC 57.207 43.478 0.00 0.00 0.00 4.40
2083 2375 4.589374 ACAGTTCCATATCTACCTAGCACC 59.411 45.833 0.00 0.00 0.00 5.01
2084 2376 4.835615 CAGTTCCATATCTACCTAGCACCT 59.164 45.833 0.00 0.00 0.00 4.00
2085 2377 5.047660 CAGTTCCATATCTACCTAGCACCTC 60.048 48.000 0.00 0.00 0.00 3.85
2086 2378 3.687125 TCCATATCTACCTAGCACCTCG 58.313 50.000 0.00 0.00 0.00 4.63
2087 2379 3.074094 TCCATATCTACCTAGCACCTCGT 59.926 47.826 0.00 0.00 0.00 4.18
2088 2380 3.827302 CCATATCTACCTAGCACCTCGTT 59.173 47.826 0.00 0.00 0.00 3.85
2089 2381 4.281182 CCATATCTACCTAGCACCTCGTTT 59.719 45.833 0.00 0.00 0.00 3.60
2090 2382 3.802948 ATCTACCTAGCACCTCGTTTG 57.197 47.619 0.00 0.00 0.00 2.93
2091 2383 1.822990 TCTACCTAGCACCTCGTTTGG 59.177 52.381 0.00 0.00 0.00 3.28
2092 2384 0.248289 TACCTAGCACCTCGTTTGGC 59.752 55.000 0.00 0.00 0.00 4.52
2179 2471 9.121517 CTGCACGATAATTGGAATCATAATTTC 57.878 33.333 0.00 0.00 0.00 2.17
2289 2581 6.152661 ACACTTTTGGGACCAACATGTATATG 59.847 38.462 2.68 0.00 40.24 1.78
2292 2584 5.443230 TTGGGACCAACATGTATATGTGA 57.557 39.130 5.81 0.00 46.54 3.58
2295 2587 4.275936 GGGACCAACATGTATATGTGAAGC 59.724 45.833 5.81 0.00 46.54 3.86
2307 2599 2.512485 TGTGAAGCAGCCAAAATGTG 57.488 45.000 0.00 0.00 0.00 3.21
2312 2604 2.554370 AGCAGCCAAAATGTGCAAAT 57.446 40.000 0.00 0.00 39.80 2.32
2424 2893 6.260936 AGACCAATGTTTTGTGAAGTACTCTG 59.739 38.462 0.00 0.00 0.00 3.35
2446 2916 3.375699 CCTCTCTACAACTATGTGGGGT 58.624 50.000 0.00 0.00 39.41 4.95
2453 2923 4.553330 ACAACTATGTGGGGTCTACTTG 57.447 45.455 0.00 0.00 38.69 3.16
2464 2934 3.057526 GGGGTCTACTTGCACAAATTGTC 60.058 47.826 0.00 0.00 0.00 3.18
2476 2946 6.486248 TGCACAAATTGTCTAGCGAATAATC 58.514 36.000 0.00 0.00 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.592400 TAGCGTCGCTACCACTTGCT 61.592 55.000 22.68 0.00 40.44 3.91
1 2 1.140407 CTAGCGTCGCTACCACTTGC 61.140 60.000 22.68 0.00 40.44 4.01
2 3 0.170561 ACTAGCGTCGCTACCACTTG 59.829 55.000 22.68 14.11 40.44 3.16
3 4 0.450983 GACTAGCGTCGCTACCACTT 59.549 55.000 22.68 5.22 40.44 3.16
4 5 2.096596 GACTAGCGTCGCTACCACT 58.903 57.895 22.68 5.85 40.44 4.00
5 6 4.686227 GACTAGCGTCGCTACCAC 57.314 61.111 22.68 12.64 40.44 4.16
16 17 0.249238 CTGCCCTCATGACGACTAGC 60.249 60.000 0.00 0.00 0.00 3.42
17 18 0.387202 CCTGCCCTCATGACGACTAG 59.613 60.000 0.00 0.00 0.00 2.57
18 19 1.043116 CCCTGCCCTCATGACGACTA 61.043 60.000 0.00 0.00 0.00 2.59
19 20 2.362369 CCCTGCCCTCATGACGACT 61.362 63.158 0.00 0.00 0.00 4.18
20 21 2.187946 CCCTGCCCTCATGACGAC 59.812 66.667 0.00 0.00 0.00 4.34
21 22 3.083349 CCCCTGCCCTCATGACGA 61.083 66.667 0.00 0.00 0.00 4.20
22 23 4.181010 CCCCCTGCCCTCATGACG 62.181 72.222 0.00 0.00 0.00 4.35
23 24 4.512914 GCCCCCTGCCCTCATGAC 62.513 72.222 0.00 0.00 0.00 3.06
25 26 4.517934 CTGCCCCCTGCCCTCATG 62.518 72.222 0.00 0.00 40.16 3.07
26 27 4.765970 TCTGCCCCCTGCCCTCAT 62.766 66.667 0.00 0.00 40.16 2.90
27 28 4.765970 ATCTGCCCCCTGCCCTCA 62.766 66.667 0.00 0.00 40.16 3.86
28 29 4.201122 CATCTGCCCCCTGCCCTC 62.201 72.222 0.00 0.00 40.16 4.30
38 39 4.465512 CAACACCGCGCATCTGCC 62.466 66.667 8.75 0.00 37.91 4.85
39 40 3.254014 AACAACACCGCGCATCTGC 62.254 57.895 8.75 0.00 37.78 4.26
40 41 1.440850 CAACAACACCGCGCATCTG 60.441 57.895 8.75 0.64 0.00 2.90
41 42 2.616330 CCAACAACACCGCGCATCT 61.616 57.895 8.75 0.00 0.00 2.90
42 43 2.123988 TTCCAACAACACCGCGCATC 62.124 55.000 8.75 0.00 0.00 3.91
43 44 1.729470 TTTCCAACAACACCGCGCAT 61.729 50.000 8.75 0.00 0.00 4.73
44 45 1.729470 ATTTCCAACAACACCGCGCA 61.729 50.000 8.75 0.00 0.00 6.09
45 46 0.238817 TATTTCCAACAACACCGCGC 59.761 50.000 0.00 0.00 0.00 6.86
46 47 2.514902 CATATTTCCAACAACACCGCG 58.485 47.619 0.00 0.00 0.00 6.46
47 48 2.258755 GCATATTTCCAACAACACCGC 58.741 47.619 0.00 0.00 0.00 5.68
48 49 2.416701 GGGCATATTTCCAACAACACCG 60.417 50.000 0.00 0.00 0.00 4.94
49 50 2.831526 AGGGCATATTTCCAACAACACC 59.168 45.455 0.00 0.00 0.00 4.16
50 51 4.947388 TCTAGGGCATATTTCCAACAACAC 59.053 41.667 0.00 0.00 0.00 3.32
51 52 5.186256 TCTAGGGCATATTTCCAACAACA 57.814 39.130 0.00 0.00 0.00 3.33
52 53 4.580580 CCTCTAGGGCATATTTCCAACAAC 59.419 45.833 0.00 0.00 0.00 3.32
53 54 4.792068 CCTCTAGGGCATATTTCCAACAA 58.208 43.478 0.00 0.00 0.00 2.83
54 55 4.437682 CCTCTAGGGCATATTTCCAACA 57.562 45.455 0.00 0.00 0.00 3.33
66 67 6.301169 ATACAATAGTATTGCCTCTAGGGC 57.699 41.667 20.52 13.60 45.21 5.19
87 88 9.944376 CCGATTTGGAGGAGAAATATAAGAATA 57.056 33.333 0.00 0.00 42.00 1.75
88 89 8.660435 TCCGATTTGGAGGAGAAATATAAGAAT 58.340 33.333 0.00 0.00 43.74 2.40
89 90 8.029782 TCCGATTTGGAGGAGAAATATAAGAA 57.970 34.615 0.00 0.00 43.74 2.52
90 91 7.612065 TCCGATTTGGAGGAGAAATATAAGA 57.388 36.000 0.00 0.00 43.74 2.10
105 106 5.070770 TCAAACAATGGATTCCGATTTGG 57.929 39.130 15.22 0.00 40.09 3.28
106 107 6.867816 TCTTTCAAACAATGGATTCCGATTTG 59.132 34.615 11.60 11.60 0.00 2.32
107 108 6.991938 TCTTTCAAACAATGGATTCCGATTT 58.008 32.000 0.00 0.00 0.00 2.17
108 109 6.588719 TCTTTCAAACAATGGATTCCGATT 57.411 33.333 0.00 0.00 0.00 3.34
109 110 6.434028 TCTTCTTTCAAACAATGGATTCCGAT 59.566 34.615 0.00 0.00 0.00 4.18
110 111 5.767665 TCTTCTTTCAAACAATGGATTCCGA 59.232 36.000 0.00 0.00 0.00 4.55
111 112 6.012658 TCTTCTTTCAAACAATGGATTCCG 57.987 37.500 0.00 0.00 0.00 4.30
112 113 6.870439 CCTTCTTCTTTCAAACAATGGATTCC 59.130 38.462 0.00 0.00 0.00 3.01
113 114 6.870439 CCCTTCTTCTTTCAAACAATGGATTC 59.130 38.462 0.00 0.00 0.00 2.52
114 115 6.554605 TCCCTTCTTCTTTCAAACAATGGATT 59.445 34.615 0.00 0.00 0.00 3.01
115 116 6.077322 TCCCTTCTTCTTTCAAACAATGGAT 58.923 36.000 0.00 0.00 0.00 3.41
116 117 5.454062 TCCCTTCTTCTTTCAAACAATGGA 58.546 37.500 0.00 0.00 0.00 3.41
117 118 5.789643 TCCCTTCTTCTTTCAAACAATGG 57.210 39.130 0.00 0.00 0.00 3.16
118 119 8.579863 AGTTATCCCTTCTTCTTTCAAACAATG 58.420 33.333 0.00 0.00 0.00 2.82
119 120 8.712228 AGTTATCCCTTCTTCTTTCAAACAAT 57.288 30.769 0.00 0.00 0.00 2.71
120 121 8.533569 AAGTTATCCCTTCTTCTTTCAAACAA 57.466 30.769 0.00 0.00 0.00 2.83
121 122 8.533569 AAAGTTATCCCTTCTTCTTTCAAACA 57.466 30.769 0.00 0.00 0.00 2.83
122 123 9.817809 AAAAAGTTATCCCTTCTTCTTTCAAAC 57.182 29.630 0.00 0.00 0.00 2.93
145 146 4.932799 TCGATGAATTGTCGGAGCTAAAAA 59.067 37.500 9.25 0.00 39.45 1.94
146 147 4.500127 TCGATGAATTGTCGGAGCTAAAA 58.500 39.130 9.25 0.00 39.45 1.52
147 148 4.118093 TCGATGAATTGTCGGAGCTAAA 57.882 40.909 9.25 0.00 39.45 1.85
148 149 3.793797 TCGATGAATTGTCGGAGCTAA 57.206 42.857 9.25 0.00 39.45 3.09
149 150 3.119280 TGTTCGATGAATTGTCGGAGCTA 60.119 43.478 9.25 0.00 39.45 3.32
150 151 2.271800 GTTCGATGAATTGTCGGAGCT 58.728 47.619 9.25 0.00 39.45 4.09
151 152 1.999735 TGTTCGATGAATTGTCGGAGC 59.000 47.619 9.25 2.81 39.45 4.70
152 153 3.254060 ACTGTTCGATGAATTGTCGGAG 58.746 45.455 9.25 6.50 39.45 4.63
153 154 3.313012 ACTGTTCGATGAATTGTCGGA 57.687 42.857 9.25 0.00 39.45 4.55
154 155 3.736213 CAACTGTTCGATGAATTGTCGG 58.264 45.455 9.25 0.00 39.45 4.79
155 156 3.155998 GCAACTGTTCGATGAATTGTCG 58.844 45.455 3.99 3.99 40.30 4.35
156 157 3.492313 GGCAACTGTTCGATGAATTGTC 58.508 45.455 0.00 0.00 0.00 3.18
157 158 2.095768 CGGCAACTGTTCGATGAATTGT 60.096 45.455 0.00 0.00 0.00 2.71
158 159 2.508867 CGGCAACTGTTCGATGAATTG 58.491 47.619 0.00 0.00 0.00 2.32
159 160 1.468520 CCGGCAACTGTTCGATGAATT 59.531 47.619 3.53 0.00 0.00 2.17
160 161 1.086696 CCGGCAACTGTTCGATGAAT 58.913 50.000 3.53 0.00 0.00 2.57
161 162 0.953471 CCCGGCAACTGTTCGATGAA 60.953 55.000 0.00 0.00 0.00 2.57
162 163 1.375396 CCCGGCAACTGTTCGATGA 60.375 57.895 0.00 0.00 0.00 2.92
163 164 3.039202 GCCCGGCAACTGTTCGATG 62.039 63.158 3.91 0.00 0.00 3.84
164 165 2.746277 GCCCGGCAACTGTTCGAT 60.746 61.111 3.91 0.00 0.00 3.59
165 166 3.545124 ATGCCCGGCAACTGTTCGA 62.545 57.895 18.00 0.00 43.62 3.71
166 167 3.055719 ATGCCCGGCAACTGTTCG 61.056 61.111 18.00 0.00 43.62 3.95
167 168 2.568090 CATGCCCGGCAACTGTTC 59.432 61.111 18.00 0.00 43.62 3.18
168 169 2.990967 CCATGCCCGGCAACTGTT 60.991 61.111 18.00 0.00 43.62 3.16
169 170 4.284550 ACCATGCCCGGCAACTGT 62.285 61.111 18.00 10.97 43.62 3.55
170 171 3.751246 CACCATGCCCGGCAACTG 61.751 66.667 18.00 11.25 43.62 3.16
171 172 3.925630 CTCACCATGCCCGGCAACT 62.926 63.158 18.00 0.00 43.62 3.16
172 173 2.813226 TACTCACCATGCCCGGCAAC 62.813 60.000 18.00 0.00 43.62 4.17
173 174 1.920734 ATACTCACCATGCCCGGCAA 61.921 55.000 18.00 0.00 43.62 4.52
174 175 1.051556 TATACTCACCATGCCCGGCA 61.052 55.000 16.17 16.17 44.86 5.69
175 176 0.320771 CTATACTCACCATGCCCGGC 60.321 60.000 1.04 1.04 0.00 6.13
176 177 0.320771 GCTATACTCACCATGCCCGG 60.321 60.000 0.00 0.00 0.00 5.73
177 178 0.392706 TGCTATACTCACCATGCCCG 59.607 55.000 0.00 0.00 0.00 6.13
178 179 1.417890 ACTGCTATACTCACCATGCCC 59.582 52.381 0.00 0.00 0.00 5.36
179 180 2.918712 ACTGCTATACTCACCATGCC 57.081 50.000 0.00 0.00 0.00 4.40
180 181 3.243873 TGCTACTGCTATACTCACCATGC 60.244 47.826 0.00 0.00 40.48 4.06
181 182 4.590850 TGCTACTGCTATACTCACCATG 57.409 45.455 0.00 0.00 40.48 3.66
182 183 5.614324 TTTGCTACTGCTATACTCACCAT 57.386 39.130 0.00 0.00 40.48 3.55
183 184 5.359756 CATTTGCTACTGCTATACTCACCA 58.640 41.667 0.00 0.00 40.48 4.17
184 185 4.752101 CCATTTGCTACTGCTATACTCACC 59.248 45.833 0.00 0.00 40.48 4.02
185 186 5.360591 ACCATTTGCTACTGCTATACTCAC 58.639 41.667 0.00 0.00 40.48 3.51
186 187 5.614324 ACCATTTGCTACTGCTATACTCA 57.386 39.130 0.00 0.00 40.48 3.41
187 188 5.927115 GGTACCATTTGCTACTGCTATACTC 59.073 44.000 7.15 0.00 40.48 2.59
188 189 5.602978 AGGTACCATTTGCTACTGCTATACT 59.397 40.000 15.94 0.00 40.48 2.12
189 190 5.696724 CAGGTACCATTTGCTACTGCTATAC 59.303 44.000 15.94 0.00 40.48 1.47
190 191 5.221641 CCAGGTACCATTTGCTACTGCTATA 60.222 44.000 15.94 0.00 40.48 1.31
191 192 4.444876 CCAGGTACCATTTGCTACTGCTAT 60.445 45.833 15.94 0.00 40.48 2.97
192 193 3.118408 CCAGGTACCATTTGCTACTGCTA 60.118 47.826 15.94 0.00 40.48 3.49
193 194 2.356125 CCAGGTACCATTTGCTACTGCT 60.356 50.000 15.94 0.00 40.48 4.24
194 195 2.017049 CCAGGTACCATTTGCTACTGC 58.983 52.381 15.94 0.00 40.20 4.40
195 196 2.017049 GCCAGGTACCATTTGCTACTG 58.983 52.381 15.94 0.00 0.00 2.74
196 197 1.406887 CGCCAGGTACCATTTGCTACT 60.407 52.381 15.94 0.00 0.00 2.57
197 198 1.014352 CGCCAGGTACCATTTGCTAC 58.986 55.000 15.94 0.00 0.00 3.58
198 199 0.107410 CCGCCAGGTACCATTTGCTA 60.107 55.000 15.94 0.00 0.00 3.49
199 200 1.378514 CCGCCAGGTACCATTTGCT 60.379 57.895 15.94 0.00 0.00 3.91
200 201 2.414785 CCCGCCAGGTACCATTTGC 61.415 63.158 15.94 9.61 35.12 3.68
201 202 0.106719 ATCCCGCCAGGTACCATTTG 60.107 55.000 15.94 3.41 36.75 2.32
202 203 0.106719 CATCCCGCCAGGTACCATTT 60.107 55.000 15.94 0.00 36.75 2.32
203 204 1.531748 CATCCCGCCAGGTACCATT 59.468 57.895 15.94 0.00 36.75 3.16
204 205 2.452064 CCATCCCGCCAGGTACCAT 61.452 63.158 15.94 0.00 36.75 3.55
205 206 3.087253 CCATCCCGCCAGGTACCA 61.087 66.667 15.94 0.00 36.75 3.25
206 207 3.087906 ACCATCCCGCCAGGTACC 61.088 66.667 2.73 2.73 36.75 3.34
207 208 2.504519 GACCATCCCGCCAGGTAC 59.495 66.667 0.00 0.00 35.36 3.34
208 209 3.151710 CGACCATCCCGCCAGGTA 61.152 66.667 0.00 0.00 35.36 3.08
211 212 4.227134 CTCCGACCATCCCGCCAG 62.227 72.222 0.00 0.00 0.00 4.85
214 215 3.917760 CTCCTCCGACCATCCCGC 61.918 72.222 0.00 0.00 0.00 6.13
215 216 2.123854 TCTCCTCCGACCATCCCG 60.124 66.667 0.00 0.00 0.00 5.14
216 217 1.834822 CCTCTCCTCCGACCATCCC 60.835 68.421 0.00 0.00 0.00 3.85
217 218 1.834822 CCCTCTCCTCCGACCATCC 60.835 68.421 0.00 0.00 0.00 3.51
218 219 1.834822 CCCCTCTCCTCCGACCATC 60.835 68.421 0.00 0.00 0.00 3.51
219 220 2.182858 AACCCCTCTCCTCCGACCAT 62.183 60.000 0.00 0.00 0.00 3.55
220 221 2.865147 AACCCCTCTCCTCCGACCA 61.865 63.158 0.00 0.00 0.00 4.02
221 222 2.039137 AACCCCTCTCCTCCGACC 59.961 66.667 0.00 0.00 0.00 4.79
222 223 0.903454 TTCAACCCCTCTCCTCCGAC 60.903 60.000 0.00 0.00 0.00 4.79
223 224 0.042731 ATTCAACCCCTCTCCTCCGA 59.957 55.000 0.00 0.00 0.00 4.55
224 225 0.179000 CATTCAACCCCTCTCCTCCG 59.821 60.000 0.00 0.00 0.00 4.63
225 226 0.106967 GCATTCAACCCCTCTCCTCC 60.107 60.000 0.00 0.00 0.00 4.30
226 227 0.106967 GGCATTCAACCCCTCTCCTC 60.107 60.000 0.00 0.00 0.00 3.71
227 228 0.846427 TGGCATTCAACCCCTCTCCT 60.846 55.000 0.00 0.00 0.00 3.69
228 229 0.681243 GTGGCATTCAACCCCTCTCC 60.681 60.000 0.00 0.00 0.00 3.71
229 230 1.026718 CGTGGCATTCAACCCCTCTC 61.027 60.000 0.00 0.00 0.00 3.20
230 231 1.002134 CGTGGCATTCAACCCCTCT 60.002 57.895 0.00 0.00 0.00 3.69
231 232 2.046285 CCGTGGCATTCAACCCCTC 61.046 63.158 0.00 0.00 0.00 4.30
232 233 2.035626 CCGTGGCATTCAACCCCT 59.964 61.111 0.00 0.00 0.00 4.79
233 234 2.034999 TCCGTGGCATTCAACCCC 59.965 61.111 0.00 0.00 0.00 4.95
234 235 2.046285 CCTCCGTGGCATTCAACCC 61.046 63.158 0.00 0.00 0.00 4.11
235 236 1.002624 TCCTCCGTGGCATTCAACC 60.003 57.895 0.00 0.00 35.26 3.77
236 237 0.036388 TCTCCTCCGTGGCATTCAAC 60.036 55.000 0.00 0.00 35.26 3.18
237 238 0.690192 TTCTCCTCCGTGGCATTCAA 59.310 50.000 0.00 0.00 35.26 2.69
238 239 0.250234 CTTCTCCTCCGTGGCATTCA 59.750 55.000 0.00 0.00 35.26 2.57
239 240 1.092345 GCTTCTCCTCCGTGGCATTC 61.092 60.000 0.00 0.00 35.26 2.67
240 241 1.078143 GCTTCTCCTCCGTGGCATT 60.078 57.895 0.00 0.00 35.26 3.56
241 242 2.586792 GCTTCTCCTCCGTGGCAT 59.413 61.111 0.00 0.00 35.26 4.40
242 243 4.069232 CGCTTCTCCTCCGTGGCA 62.069 66.667 0.00 0.00 35.26 4.92
243 244 4.821589 CCGCTTCTCCTCCGTGGC 62.822 72.222 0.00 0.00 35.26 5.01
244 245 3.382832 ACCGCTTCTCCTCCGTGG 61.383 66.667 0.00 0.00 37.10 4.94
245 246 2.125912 CACCGCTTCTCCTCCGTG 60.126 66.667 0.00 0.00 0.00 4.94
246 247 2.600769 ACACCGCTTCTCCTCCGT 60.601 61.111 0.00 0.00 0.00 4.69
247 248 2.125912 CACACCGCTTCTCCTCCG 60.126 66.667 0.00 0.00 0.00 4.63
248 249 2.232298 CTCCACACCGCTTCTCCTCC 62.232 65.000 0.00 0.00 0.00 4.30
249 250 1.216710 CTCCACACCGCTTCTCCTC 59.783 63.158 0.00 0.00 0.00 3.71
250 251 1.534235 ACTCCACACCGCTTCTCCT 60.534 57.895 0.00 0.00 0.00 3.69
251 252 1.079750 GACTCCACACCGCTTCTCC 60.080 63.158 0.00 0.00 0.00 3.71
252 253 1.444553 CGACTCCACACCGCTTCTC 60.445 63.158 0.00 0.00 0.00 2.87
253 254 2.651361 CGACTCCACACCGCTTCT 59.349 61.111 0.00 0.00 0.00 2.85
254 255 2.432628 CCGACTCCACACCGCTTC 60.433 66.667 0.00 0.00 0.00 3.86
255 256 4.681978 GCCGACTCCACACCGCTT 62.682 66.667 0.00 0.00 0.00 4.68
258 259 4.742201 CCAGCCGACTCCACACCG 62.742 72.222 0.00 0.00 0.00 4.94
259 260 2.879233 TTCCAGCCGACTCCACACC 61.879 63.158 0.00 0.00 0.00 4.16
260 261 1.668151 GTTCCAGCCGACTCCACAC 60.668 63.158 0.00 0.00 0.00 3.82
261 262 2.741092 GTTCCAGCCGACTCCACA 59.259 61.111 0.00 0.00 0.00 4.17
262 263 2.432628 CGTTCCAGCCGACTCCAC 60.433 66.667 0.00 0.00 0.00 4.02
263 264 4.373116 GCGTTCCAGCCGACTCCA 62.373 66.667 0.00 0.00 0.00 3.86
264 265 4.373116 TGCGTTCCAGCCGACTCC 62.373 66.667 0.00 0.00 36.02 3.85
265 266 2.811317 CTGCGTTCCAGCCGACTC 60.811 66.667 0.00 0.00 34.21 3.36
266 267 3.616721 ACTGCGTTCCAGCCGACT 61.617 61.111 0.00 0.00 45.78 4.18
267 268 3.414700 CACTGCGTTCCAGCCGAC 61.415 66.667 0.00 0.00 45.78 4.79
268 269 3.454587 AACACTGCGTTCCAGCCGA 62.455 57.895 0.00 0.00 45.78 5.54
269 270 2.972505 AACACTGCGTTCCAGCCG 60.973 61.111 0.00 0.00 45.78 5.52
276 277 1.021968 GGGAAAGTGAACACTGCGTT 58.978 50.000 8.25 0.00 41.58 4.84
277 278 0.180406 AGGGAAAGTGAACACTGCGT 59.820 50.000 8.25 0.00 41.58 5.24
278 279 1.798813 GTAGGGAAAGTGAACACTGCG 59.201 52.381 8.25 0.00 41.58 5.18
279 280 3.127425 AGTAGGGAAAGTGAACACTGC 57.873 47.619 8.25 4.26 41.58 4.40
280 281 6.710744 ACATTTAGTAGGGAAAGTGAACACTG 59.289 38.462 8.25 0.00 41.58 3.66
281 282 6.838382 ACATTTAGTAGGGAAAGTGAACACT 58.162 36.000 1.32 1.32 44.94 3.55
282 283 7.012989 ACAACATTTAGTAGGGAAAGTGAACAC 59.987 37.037 0.00 0.00 0.00 3.32
283 284 7.057894 ACAACATTTAGTAGGGAAAGTGAACA 58.942 34.615 0.00 0.00 0.00 3.18
284 285 7.506328 ACAACATTTAGTAGGGAAAGTGAAC 57.494 36.000 0.00 0.00 0.00 3.18
285 286 8.528044 AAACAACATTTAGTAGGGAAAGTGAA 57.472 30.769 0.00 0.00 0.00 3.18
286 287 8.528044 AAAACAACATTTAGTAGGGAAAGTGA 57.472 30.769 0.00 0.00 0.00 3.41
287 288 8.410141 TGAAAACAACATTTAGTAGGGAAAGTG 58.590 33.333 0.00 0.00 0.00 3.16
288 289 8.528044 TGAAAACAACATTTAGTAGGGAAAGT 57.472 30.769 0.00 0.00 0.00 2.66
289 290 9.410556 CATGAAAACAACATTTAGTAGGGAAAG 57.589 33.333 0.00 0.00 0.00 2.62
290 291 8.919145 ACATGAAAACAACATTTAGTAGGGAAA 58.081 29.630 0.00 0.00 0.00 3.13
291 292 8.472007 ACATGAAAACAACATTTAGTAGGGAA 57.528 30.769 0.00 0.00 0.00 3.97
292 293 7.721842 TGACATGAAAACAACATTTAGTAGGGA 59.278 33.333 0.00 0.00 0.00 4.20
293 294 7.881142 TGACATGAAAACAACATTTAGTAGGG 58.119 34.615 0.00 0.00 0.00 3.53
294 295 9.345517 CATGACATGAAAACAACATTTAGTAGG 57.654 33.333 10.03 0.00 0.00 3.18
295 296 9.897744 ACATGACATGAAAACAACATTTAGTAG 57.102 29.630 22.19 0.00 0.00 2.57
296 297 9.891828 GACATGACATGAAAACAACATTTAGTA 57.108 29.630 22.19 0.00 0.00 1.82
297 298 8.412456 TGACATGACATGAAAACAACATTTAGT 58.588 29.630 22.19 0.00 0.00 2.24
298 299 8.693504 GTGACATGACATGAAAACAACATTTAG 58.306 33.333 22.19 0.00 0.00 1.85
299 300 7.651304 GGTGACATGACATGAAAACAACATTTA 59.349 33.333 22.19 0.00 0.00 1.40
300 301 6.479660 GGTGACATGACATGAAAACAACATTT 59.520 34.615 22.19 0.00 0.00 2.32
301 302 5.984926 GGTGACATGACATGAAAACAACATT 59.015 36.000 22.19 0.00 0.00 2.71
302 303 5.068855 TGGTGACATGACATGAAAACAACAT 59.931 36.000 22.19 0.00 33.40 2.71
303 304 4.400567 TGGTGACATGACATGAAAACAACA 59.599 37.500 22.19 18.62 33.40 3.33
304 305 4.739716 GTGGTGACATGACATGAAAACAAC 59.260 41.667 22.19 16.65 46.14 3.32
305 306 4.930963 GTGGTGACATGACATGAAAACAA 58.069 39.130 22.19 7.52 46.14 2.83
306 307 4.566545 GTGGTGACATGACATGAAAACA 57.433 40.909 22.19 14.31 46.14 2.83
318 319 8.717821 GTTAACAATATATATGCGTGGTGACAT 58.282 33.333 0.00 0.00 46.14 3.06
319 320 7.711339 TGTTAACAATATATATGCGTGGTGACA 59.289 33.333 5.64 5.05 38.70 3.58
320 321 8.078959 TGTTAACAATATATATGCGTGGTGAC 57.921 34.615 5.64 0.00 0.00 3.67
321 322 8.664211 TTGTTAACAATATATATGCGTGGTGA 57.336 30.769 17.01 0.00 0.00 4.02
322 323 9.891828 ATTTGTTAACAATATATATGCGTGGTG 57.108 29.630 21.17 0.00 35.55 4.17
359 360 7.936496 AAAACCCAAAATGAGTGTGATTTTT 57.064 28.000 0.00 0.00 31.96 1.94
360 361 7.936496 AAAAACCCAAAATGAGTGTGATTTT 57.064 28.000 0.00 0.00 34.10 1.82
460 461 9.581099 AAAAACACGAGAAACTTTATGAAACAT 57.419 25.926 0.00 0.00 0.00 2.71
461 462 8.973835 AAAAACACGAGAAACTTTATGAAACA 57.026 26.923 0.00 0.00 0.00 2.83
498 499 9.685828 GTTGTTGCAGGAACTATTAACAAATAA 57.314 29.630 6.35 0.00 42.10 1.40
499 500 8.018520 CGTTGTTGCAGGAACTATTAACAAATA 58.981 33.333 6.35 0.00 42.10 1.40
500 501 6.861055 CGTTGTTGCAGGAACTATTAACAAAT 59.139 34.615 6.35 0.00 42.10 2.32
501 502 6.202937 CGTTGTTGCAGGAACTATTAACAAA 58.797 36.000 6.35 0.00 42.10 2.83
502 503 5.753744 CGTTGTTGCAGGAACTATTAACAA 58.246 37.500 6.35 0.00 40.05 2.83
503 504 4.319911 GCGTTGTTGCAGGAACTATTAACA 60.320 41.667 6.35 0.00 36.02 2.41
504 505 4.156182 GCGTTGTTGCAGGAACTATTAAC 58.844 43.478 6.35 1.51 36.02 2.01
505 506 3.815962 TGCGTTGTTGCAGGAACTATTAA 59.184 39.130 6.35 0.00 40.62 1.40
506 507 3.403968 TGCGTTGTTGCAGGAACTATTA 58.596 40.909 6.35 0.00 40.62 0.98
507 508 2.226330 TGCGTTGTTGCAGGAACTATT 58.774 42.857 6.35 0.00 40.62 1.73
508 509 1.890876 TGCGTTGTTGCAGGAACTAT 58.109 45.000 6.35 0.00 40.62 2.12
509 510 3.388272 TGCGTTGTTGCAGGAACTA 57.612 47.368 6.35 0.00 40.62 2.24
510 511 4.234019 TGCGTTGTTGCAGGAACT 57.766 50.000 6.35 0.00 40.62 3.01
516 517 0.536233 ATACCCTGTGCGTTGTTGCA 60.536 50.000 0.00 0.00 43.95 4.08
517 518 0.168128 GATACCCTGTGCGTTGTTGC 59.832 55.000 0.00 0.00 0.00 4.17
518 519 1.518325 TGATACCCTGTGCGTTGTTG 58.482 50.000 0.00 0.00 0.00 3.33
519 520 2.027192 AGATGATACCCTGTGCGTTGTT 60.027 45.455 0.00 0.00 0.00 2.83
520 521 1.555075 AGATGATACCCTGTGCGTTGT 59.445 47.619 0.00 0.00 0.00 3.32
521 522 2.315925 AGATGATACCCTGTGCGTTG 57.684 50.000 0.00 0.00 0.00 4.10
522 523 4.689612 ATTAGATGATACCCTGTGCGTT 57.310 40.909 0.00 0.00 0.00 4.84
523 524 4.833380 ACTATTAGATGATACCCTGTGCGT 59.167 41.667 0.00 0.00 0.00 5.24
524 525 5.392767 ACTATTAGATGATACCCTGTGCG 57.607 43.478 0.00 0.00 0.00 5.34
545 546 9.820229 GGTAAAAGCTTTGCCATTTTTATTAAC 57.180 29.630 21.43 3.96 30.47 2.01
546 547 9.785982 AGGTAAAAGCTTTGCCATTTTTATTAA 57.214 25.926 25.58 0.00 30.47 1.40
558 559 3.349488 AACACGAGGTAAAAGCTTTGC 57.651 42.857 13.54 8.88 0.00 3.68
587 588 3.251729 GCACCGAAGATGACATAATGCAT 59.748 43.478 0.00 0.00 0.00 3.96
712 716 9.046296 GGAGATGACATCAATTATTACGAGTTT 57.954 33.333 17.57 0.00 0.00 2.66
713 717 7.382488 CGGAGATGACATCAATTATTACGAGTT 59.618 37.037 17.57 0.00 0.00 3.01
714 718 6.863645 CGGAGATGACATCAATTATTACGAGT 59.136 38.462 17.57 0.00 0.00 4.18
715 719 6.863645 ACGGAGATGACATCAATTATTACGAG 59.136 38.462 17.57 0.00 0.00 4.18
717 721 6.616471 GCACGGAGATGACATCAATTATTACG 60.616 42.308 17.57 10.18 0.00 3.18
718 722 6.347725 GGCACGGAGATGACATCAATTATTAC 60.348 42.308 17.57 0.00 0.00 1.89
719 723 5.700832 GGCACGGAGATGACATCAATTATTA 59.299 40.000 17.57 0.00 0.00 0.98
720 724 4.516698 GGCACGGAGATGACATCAATTATT 59.483 41.667 17.57 0.00 0.00 1.40
721 725 4.067896 GGCACGGAGATGACATCAATTAT 58.932 43.478 17.57 0.00 0.00 1.28
722 726 3.466836 GGCACGGAGATGACATCAATTA 58.533 45.455 17.57 0.00 0.00 1.40
723 727 2.292267 GGCACGGAGATGACATCAATT 58.708 47.619 17.57 0.00 0.00 2.32
724 728 1.959042 GGCACGGAGATGACATCAAT 58.041 50.000 17.57 0.00 0.00 2.57
725 729 3.458872 GGCACGGAGATGACATCAA 57.541 52.632 17.57 0.00 0.00 2.57
767 771 6.188407 TGTACTAGATTAGCTTCAGAGTGGT 58.812 40.000 0.00 0.00 0.00 4.16
808 819 4.256920 AGAATTTTACTCGCAGCTGTCAT 58.743 39.130 16.64 1.31 0.00 3.06
860 871 1.259840 GGTAGAGGGTACGGTGGCAA 61.260 60.000 0.00 0.00 0.00 4.52
927 939 2.856760 AGGTAGAGGAATGAGAGCCA 57.143 50.000 0.00 0.00 0.00 4.75
1045 1063 0.755327 GTCCCTTTGTTGGTGTGCCT 60.755 55.000 0.00 0.00 35.27 4.75
1074 1092 3.060020 GCCGACGCAGGTGTAGCTA 62.060 63.158 0.00 0.00 34.03 3.32
1413 1431 4.785453 GGCTGGGGCTCAACCTCG 62.785 72.222 0.00 0.00 45.03 4.63
1470 1488 2.441532 CCGAAGCCCTAGACCGGA 60.442 66.667 9.46 0.00 42.49 5.14
1521 1539 5.404667 GCGACAAGCTACAAACTAAACTAGT 59.595 40.000 0.00 0.00 44.04 2.57
1555 1573 7.261325 AGTTACAACTACATGCTGTATCAGAG 58.739 38.462 0.00 0.00 37.52 3.35
1609 1633 5.751990 CAGTATCCGTTGTACCCAGAATAAC 59.248 44.000 0.00 0.00 0.00 1.89
1677 1702 7.952637 CAGAAGAATTTAGAAACTTGTACGCTC 59.047 37.037 0.00 0.00 0.00 5.03
1679 1704 7.573627 ACAGAAGAATTTAGAAACTTGTACGC 58.426 34.615 0.00 0.00 0.00 4.42
1680 1705 8.761497 TGACAGAAGAATTTAGAAACTTGTACG 58.239 33.333 0.00 0.00 0.00 3.67
1683 1708 8.964476 TCTGACAGAAGAATTTAGAAACTTGT 57.036 30.769 1.64 0.00 0.00 3.16
1699 1781 4.699735 TGCTGAAAACAACTTCTGACAGAA 59.300 37.500 16.86 16.86 32.50 3.02
1702 1784 3.181497 GCTGCTGAAAACAACTTCTGACA 60.181 43.478 0.00 0.00 0.00 3.58
1704 1786 3.065786 CAGCTGCTGAAAACAACTTCTGA 59.934 43.478 24.88 0.00 32.44 3.27
1768 1850 8.594881 TTCTAGAATTAAAAGATCGATCAGGC 57.405 34.615 26.47 0.57 0.00 4.85
1769 1851 9.757227 ACTTCTAGAATTAAAAGATCGATCAGG 57.243 33.333 26.47 4.85 0.00 3.86
1783 1865 6.285990 GGCCGGTTAATGACTTCTAGAATTA 58.714 40.000 5.44 0.00 0.00 1.40
1790 1872 0.611714 ACGGCCGGTTAATGACTTCT 59.388 50.000 31.76 0.00 0.00 2.85
1804 1886 2.462889 CAAATGTGCAATCATACGGCC 58.537 47.619 0.00 0.00 0.00 6.13
1820 1902 3.448660 GGGAATTTCTAGCCAGTGCAAAT 59.551 43.478 0.00 0.00 41.13 2.32
1834 1916 7.099120 AGTGATAGTGCATTTTTGGGAATTTC 58.901 34.615 0.00 0.00 0.00 2.17
1904 1986 7.287696 AGGAAGTGATTATTTTGAAACAGGTGT 59.712 33.333 0.00 0.00 0.00 4.16
1905 1987 7.661040 AGGAAGTGATTATTTTGAAACAGGTG 58.339 34.615 0.00 0.00 0.00 4.00
1943 2025 5.874810 TGCTCGCTTTGTAGAGTATCATTTT 59.125 36.000 0.00 0.00 37.82 1.82
1944 2026 5.419542 TGCTCGCTTTGTAGAGTATCATTT 58.580 37.500 0.00 0.00 37.82 2.32
1985 2277 6.183360 GGCCCCACTGCAATTTTTATTAAATG 60.183 38.462 0.00 0.00 0.00 2.32
1987 2279 5.013599 AGGCCCCACTGCAATTTTTATTAAA 59.986 36.000 0.00 0.00 0.00 1.52
1989 2281 4.100373 AGGCCCCACTGCAATTTTTATTA 58.900 39.130 0.00 0.00 0.00 0.98
1990 2282 2.912295 AGGCCCCACTGCAATTTTTATT 59.088 40.909 0.00 0.00 0.00 1.40
1993 2285 1.139439 AAGGCCCCACTGCAATTTTT 58.861 45.000 0.00 0.00 0.00 1.94
1994 2286 0.397564 CAAGGCCCCACTGCAATTTT 59.602 50.000 0.00 0.00 0.00 1.82
1995 2287 2.060370 CAAGGCCCCACTGCAATTT 58.940 52.632 0.00 0.00 0.00 1.82
1996 2288 2.586293 GCAAGGCCCCACTGCAATT 61.586 57.895 0.00 0.00 0.00 2.32
1997 2289 2.999063 GCAAGGCCCCACTGCAAT 60.999 61.111 0.00 0.00 0.00 3.56
2007 2299 4.886351 CTGTACACAGTAGGGCAAGGCC 62.886 59.091 4.20 4.20 42.52 5.19
2008 2300 0.323629 TGTACACAGTAGGGCAAGGC 59.676 55.000 0.00 0.00 0.00 4.35
2009 2301 1.899814 TCTGTACACAGTAGGGCAAGG 59.100 52.381 9.11 0.00 44.12 3.61
2010 2302 2.299013 TGTCTGTACACAGTAGGGCAAG 59.701 50.000 9.11 0.00 44.12 4.01
2011 2303 2.321719 TGTCTGTACACAGTAGGGCAA 58.678 47.619 9.11 0.00 44.12 4.52
2012 2304 2.003937 TGTCTGTACACAGTAGGGCA 57.996 50.000 9.11 0.00 44.12 5.36
2013 2305 3.396260 TTTGTCTGTACACAGTAGGGC 57.604 47.619 9.11 0.00 44.12 5.19
2036 2328 9.701098 TGTAATGTAGTCGATGTTAGACTTTTT 57.299 29.630 4.13 0.33 45.74 1.94
2037 2329 9.355215 CTGTAATGTAGTCGATGTTAGACTTTT 57.645 33.333 4.13 0.63 45.74 2.27
2038 2330 8.521176 ACTGTAATGTAGTCGATGTTAGACTTT 58.479 33.333 4.13 0.00 45.74 2.66
2039 2331 8.053026 ACTGTAATGTAGTCGATGTTAGACTT 57.947 34.615 4.13 0.00 45.74 3.01
2041 2333 7.431668 GGAACTGTAATGTAGTCGATGTTAGAC 59.568 40.741 0.00 0.00 38.81 2.59
2042 2334 7.121611 TGGAACTGTAATGTAGTCGATGTTAGA 59.878 37.037 0.00 0.00 0.00 2.10
2043 2335 7.255569 TGGAACTGTAATGTAGTCGATGTTAG 58.744 38.462 0.00 0.00 0.00 2.34
2044 2336 7.160547 TGGAACTGTAATGTAGTCGATGTTA 57.839 36.000 0.00 0.00 0.00 2.41
2045 2337 6.032956 TGGAACTGTAATGTAGTCGATGTT 57.967 37.500 0.00 0.00 0.00 2.71
2046 2338 5.654603 TGGAACTGTAATGTAGTCGATGT 57.345 39.130 0.00 0.00 0.00 3.06
2047 2339 8.300286 AGATATGGAACTGTAATGTAGTCGATG 58.700 37.037 0.00 0.00 0.00 3.84
2048 2340 8.410673 AGATATGGAACTGTAATGTAGTCGAT 57.589 34.615 0.00 0.00 0.00 3.59
2049 2341 7.818997 AGATATGGAACTGTAATGTAGTCGA 57.181 36.000 0.00 0.00 0.00 4.20
2050 2342 8.021973 GGTAGATATGGAACTGTAATGTAGTCG 58.978 40.741 0.00 0.00 0.00 4.18
2051 2343 9.080097 AGGTAGATATGGAACTGTAATGTAGTC 57.920 37.037 0.00 0.00 0.00 2.59
2054 2346 9.021807 GCTAGGTAGATATGGAACTGTAATGTA 57.978 37.037 0.00 0.00 0.00 2.29
2055 2347 7.509318 TGCTAGGTAGATATGGAACTGTAATGT 59.491 37.037 0.00 0.00 0.00 2.71
2056 2348 7.815068 GTGCTAGGTAGATATGGAACTGTAATG 59.185 40.741 0.00 0.00 0.00 1.90
2057 2349 7.038941 GGTGCTAGGTAGATATGGAACTGTAAT 60.039 40.741 0.00 0.00 0.00 1.89
2058 2350 6.267014 GGTGCTAGGTAGATATGGAACTGTAA 59.733 42.308 0.00 0.00 0.00 2.41
2059 2351 5.773680 GGTGCTAGGTAGATATGGAACTGTA 59.226 44.000 0.00 0.00 0.00 2.74
2060 2352 4.589374 GGTGCTAGGTAGATATGGAACTGT 59.411 45.833 0.00 0.00 0.00 3.55
2061 2353 4.835615 AGGTGCTAGGTAGATATGGAACTG 59.164 45.833 0.00 0.00 0.00 3.16
2062 2354 5.081032 GAGGTGCTAGGTAGATATGGAACT 58.919 45.833 0.00 0.00 0.00 3.01
2063 2355 4.082679 CGAGGTGCTAGGTAGATATGGAAC 60.083 50.000 0.00 0.00 0.00 3.62
2064 2356 4.079970 CGAGGTGCTAGGTAGATATGGAA 58.920 47.826 0.00 0.00 0.00 3.53
2065 2357 3.074094 ACGAGGTGCTAGGTAGATATGGA 59.926 47.826 0.00 0.00 0.00 3.41
2066 2358 3.422796 ACGAGGTGCTAGGTAGATATGG 58.577 50.000 0.00 0.00 0.00 2.74
2067 2359 5.223382 CAAACGAGGTGCTAGGTAGATATG 58.777 45.833 0.00 0.00 0.00 1.78
2068 2360 4.281182 CCAAACGAGGTGCTAGGTAGATAT 59.719 45.833 0.00 0.00 0.00 1.63
2069 2361 3.635373 CCAAACGAGGTGCTAGGTAGATA 59.365 47.826 0.00 0.00 0.00 1.98
2070 2362 2.431057 CCAAACGAGGTGCTAGGTAGAT 59.569 50.000 0.00 0.00 0.00 1.98
2071 2363 1.822990 CCAAACGAGGTGCTAGGTAGA 59.177 52.381 0.00 0.00 0.00 2.59
2072 2364 1.739371 GCCAAACGAGGTGCTAGGTAG 60.739 57.143 0.00 0.00 0.00 3.18
2073 2365 0.248289 GCCAAACGAGGTGCTAGGTA 59.752 55.000 0.00 0.00 0.00 3.08
2074 2366 1.003718 GCCAAACGAGGTGCTAGGT 60.004 57.895 0.00 0.00 0.00 3.08
2075 2367 1.003839 TGCCAAACGAGGTGCTAGG 60.004 57.895 0.00 0.00 0.00 3.02
2076 2368 1.298859 GGTGCCAAACGAGGTGCTAG 61.299 60.000 0.00 0.00 0.00 3.42
2077 2369 1.302192 GGTGCCAAACGAGGTGCTA 60.302 57.895 0.00 0.00 0.00 3.49
2078 2370 2.594592 GGTGCCAAACGAGGTGCT 60.595 61.111 0.00 0.00 0.00 4.40
2079 2371 3.670377 GGGTGCCAAACGAGGTGC 61.670 66.667 0.00 0.00 0.00 5.01
2080 2372 0.322098 TATGGGTGCCAAACGAGGTG 60.322 55.000 0.00 0.00 36.95 4.00
2081 2373 0.402504 TTATGGGTGCCAAACGAGGT 59.597 50.000 0.00 0.00 36.95 3.85
2082 2374 1.540267 TTTATGGGTGCCAAACGAGG 58.460 50.000 0.00 0.00 36.95 4.63
2083 2375 3.510719 CAATTTATGGGTGCCAAACGAG 58.489 45.455 0.00 0.00 36.95 4.18
2084 2376 2.232452 CCAATTTATGGGTGCCAAACGA 59.768 45.455 0.00 0.00 46.27 3.85
2085 2377 2.615869 CCAATTTATGGGTGCCAAACG 58.384 47.619 0.00 0.00 46.27 3.60
2145 2437 3.792956 CCAATTATCGTGCAGTCAAATGC 59.207 43.478 0.00 0.00 46.68 3.56
2153 2445 9.121517 GAAATTATGATTCCAATTATCGTGCAG 57.878 33.333 0.00 0.00 0.00 4.41
2179 2471 2.292828 ACTCACTGGATTGGGTTTGG 57.707 50.000 0.00 0.00 0.00 3.28
2231 2523 9.382275 GCCCATAATTTTATTTGATTGTTGACT 57.618 29.630 0.00 0.00 0.00 3.41
2233 2525 7.772757 GGGCCCATAATTTTATTTGATTGTTGA 59.227 33.333 19.95 0.00 0.00 3.18
2289 2581 1.142474 GCACATTTTGGCTGCTTCAC 58.858 50.000 0.00 0.00 0.00 3.18
2292 2584 2.328819 TTTGCACATTTTGGCTGCTT 57.671 40.000 0.00 0.00 0.00 3.91
2395 2864 4.709397 ACTTCACAAAACATTGGTCTTCCA 59.291 37.500 0.00 0.00 42.66 3.53
2396 2865 5.262588 ACTTCACAAAACATTGGTCTTCC 57.737 39.130 0.00 0.00 0.00 3.46
2397 2866 7.012421 AGAGTACTTCACAAAACATTGGTCTTC 59.988 37.037 0.00 0.00 0.00 2.87
2424 2893 2.103263 CCCCACATAGTTGTAGAGAGGC 59.897 54.545 0.00 0.00 33.76 4.70
2446 2916 4.388773 CGCTAGACAATTTGTGCAAGTAGA 59.611 41.667 6.80 0.00 0.00 2.59
2453 2923 6.719365 AGATTATTCGCTAGACAATTTGTGC 58.281 36.000 6.80 3.59 0.00 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.