Multiple sequence alignment - TraesCS7D01G328300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G328300 chr7D 100.000 5539 0 0 1 5539 419764440 419769978 0.000000e+00 10229.0
1 TraesCS7D01G328300 chr7D 92.399 842 52 6 2876 3705 487738977 487739818 0.000000e+00 1190.0
2 TraesCS7D01G328300 chr7D 83.245 758 62 28 3741 4454 487739819 487740555 2.180000e-178 636.0
3 TraesCS7D01G328300 chr7D 88.997 309 26 5 81 384 485981391 485981086 5.240000e-100 375.0
4 TraesCS7D01G328300 chr7D 89.796 294 23 5 101 388 113726903 113727195 2.440000e-98 370.0
5 TraesCS7D01G328300 chr7D 81.439 264 28 17 1734 1986 487738432 487738685 4.380000e-46 196.0
6 TraesCS7D01G328300 chr7D 92.174 115 8 1 1676 1789 419766056 419766170 1.600000e-35 161.0
7 TraesCS7D01G328300 chr7D 92.174 115 8 1 1617 1731 419766115 419766228 1.600000e-35 161.0
8 TraesCS7D01G328300 chr7D 81.675 191 21 3 1061 1250 487737991 487738168 4.470000e-31 147.0
9 TraesCS7D01G328300 chr7D 100.000 37 0 0 2309 2345 419766696 419766732 9.960000e-08 69.4
10 TraesCS7D01G328300 chr7D 100.000 37 0 0 2257 2293 419766748 419766784 9.960000e-08 69.4
11 TraesCS7D01G328300 chr7A 88.506 2175 172 40 2532 4661 513415822 513413681 0.000000e+00 2560.0
12 TraesCS7D01G328300 chr7A 91.507 836 56 5 2876 3705 555650135 555650961 0.000000e+00 1136.0
13 TraesCS7D01G328300 chr7A 91.304 644 43 9 4731 5361 513413662 513413019 0.000000e+00 867.0
14 TraesCS7D01G328300 chr7A 79.703 1010 98 59 706 1680 513417910 513416973 1.010000e-176 630.0
15 TraesCS7D01G328300 chr7A 86.070 603 51 18 3741 4316 555650962 555651558 7.880000e-173 617.0
16 TraesCS7D01G328300 chr7A 79.800 401 42 17 1833 2206 513416952 513416564 7.120000e-64 255.0
17 TraesCS7D01G328300 chr7A 82.632 190 17 5 1056 1243 555649005 555649180 2.670000e-33 154.0
18 TraesCS7D01G328300 chr7A 87.069 116 12 2 5427 5539 513412985 513412870 1.620000e-25 128.0
19 TraesCS7D01G328300 chr7A 94.595 37 1 1 1950 1986 555649806 555649841 7.750000e-04 56.5
20 TraesCS7D01G328300 chr7B 96.000 1225 39 3 2437 3654 435788980 435790201 0.000000e+00 1982.0
21 TraesCS7D01G328300 chr7B 90.205 1460 100 22 2876 4299 516464109 516465561 0.000000e+00 1864.0
22 TraesCS7D01G328300 chr7B 87.940 995 62 22 771 1735 435787044 435788010 0.000000e+00 1120.0
23 TraesCS7D01G328300 chr7B 91.626 812 33 15 3694 4470 435790201 435791012 0.000000e+00 1090.0
24 TraesCS7D01G328300 chr7B 85.654 955 87 23 4604 5539 435791328 435792251 0.000000e+00 959.0
25 TraesCS7D01G328300 chr7B 92.816 348 24 1 1693 2040 435787910 435788256 2.300000e-138 503.0
26 TraesCS7D01G328300 chr7B 96.791 187 6 0 2038 2224 435788530 435788716 4.170000e-81 313.0
27 TraesCS7D01G328300 chr7B 90.667 150 8 3 2306 2450 435788758 435788906 1.570000e-45 195.0
28 TraesCS7D01G328300 chr7B 82.632 190 18 4 1062 1250 516463119 516463294 2.670000e-33 154.0
29 TraesCS7D01G328300 chr7B 86.957 69 1 1 2225 2293 435788737 435788797 2.770000e-08 71.3
30 TraesCS7D01G328300 chr7B 94.286 35 2 0 475 509 448469911 448469945 3.000000e-03 54.7
31 TraesCS7D01G328300 chr6A 91.618 680 57 0 2980 3659 595025223 595024544 0.000000e+00 941.0
32 TraesCS7D01G328300 chr6A 90.399 677 64 1 2977 3653 595048846 595048171 0.000000e+00 889.0
33 TraesCS7D01G328300 chr6A 84.855 482 52 19 3760 4238 595024360 595023897 3.020000e-127 466.0
34 TraesCS7D01G328300 chr6A 83.858 508 52 16 3737 4238 595047945 595047462 1.820000e-124 457.0
35 TraesCS7D01G328300 chr6A 86.901 313 35 3 81 388 252838138 252837827 4.110000e-91 346.0
36 TraesCS7D01G328300 chr6A 92.576 229 17 0 4011 4239 595076719 595076947 4.140000e-86 329.0
37 TraesCS7D01G328300 chr6A 90.909 176 16 0 3751 3926 595076225 595076400 2.580000e-58 237.0
38 TraesCS7D01G328300 chr6A 92.857 98 6 1 1146 1243 595052087 595051991 2.080000e-29 141.0
39 TraesCS7D01G328300 chr6D 90.379 686 63 2 2977 3662 449187457 449186775 0.000000e+00 898.0
40 TraesCS7D01G328300 chr6D 84.160 524 53 19 3737 4253 449216843 449216343 1.080000e-131 481.0
41 TraesCS7D01G328300 chr6D 87.382 317 29 9 81 388 367030161 367030475 2.450000e-93 353.0
42 TraesCS7D01G328300 chr6D 91.477 176 15 0 3751 3926 449252805 449252980 5.540000e-60 243.0
43 TraesCS7D01G328300 chr6D 95.122 82 4 0 1158 1239 449221332 449221251 4.500000e-26 130.0
44 TraesCS7D01G328300 chr6D 93.902 82 5 0 1158 1239 449189445 449189364 2.100000e-24 124.0
45 TraesCS7D01G328300 chr6D 93.023 86 5 1 1158 1243 449247507 449247591 2.100000e-24 124.0
46 TraesCS7D01G328300 chr6B 91.074 661 59 0 2994 3654 680860970 680861630 0.000000e+00 894.0
47 TraesCS7D01G328300 chr6B 93.243 222 15 0 4017 4238 680862502 680862723 1.490000e-85 327.0
48 TraesCS7D01G328300 chr6B 88.601 193 19 1 3737 3926 680862168 680862360 1.200000e-56 231.0
49 TraesCS7D01G328300 chr1A 83.716 436 48 17 4196 4624 497875504 497875923 1.870000e-104 390.0
50 TraesCS7D01G328300 chr1A 88.818 313 29 4 81 388 291682920 291683231 4.050000e-101 379.0
51 TraesCS7D01G328300 chr1B 88.673 309 27 5 85 388 288238614 288238309 2.440000e-98 370.0
52 TraesCS7D01G328300 chr3D 88.179 313 30 5 81 388 166263491 166263801 3.150000e-97 366.0
53 TraesCS7D01G328300 chr3D 91.463 82 7 0 5458 5539 566423558 566423639 4.540000e-21 113.0
54 TraesCS7D01G328300 chr3D 87.778 90 11 0 5450 5539 566301759 566301848 7.590000e-19 106.0
55 TraesCS7D01G328300 chr5D 87.859 313 30 5 83 388 139307007 139307318 1.470000e-95 361.0
56 TraesCS7D01G328300 chr3B 87.461 319 31 6 80 392 327364227 327364542 5.280000e-95 359.0
57 TraesCS7D01G328300 chr3B 80.909 110 11 6 5440 5539 755708291 755708182 1.650000e-10 78.7
58 TraesCS7D01G328300 chr5A 81.231 325 55 3 4687 5006 688244544 688244221 1.980000e-64 257.0
59 TraesCS7D01G328300 chr2A 92.647 68 5 0 5000 5067 86268254 86268321 1.270000e-16 99.0
60 TraesCS7D01G328300 chr2A 83.784 74 12 0 5453 5526 718877727 718877654 2.770000e-08 71.3
61 TraesCS7D01G328300 chr4D 92.683 41 2 1 4603 4642 503670596 503670556 2.160000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G328300 chr7D 419764440 419769978 5538 False 2137.960000 10229 96.869600 1 5539 5 chr7D.!!$F2 5538
1 TraesCS7D01G328300 chr7D 487737991 487740555 2564 False 542.250000 1190 84.689500 1061 4454 4 chr7D.!!$F3 3393
2 TraesCS7D01G328300 chr7A 513412870 513417910 5040 True 888.000000 2560 85.276400 706 5539 5 chr7A.!!$R1 4833
3 TraesCS7D01G328300 chr7A 555649005 555651558 2553 False 490.875000 1136 88.701000 1056 4316 4 chr7A.!!$F1 3260
4 TraesCS7D01G328300 chr7B 516463119 516465561 2442 False 1009.000000 1864 86.418500 1062 4299 2 chr7B.!!$F3 3237
5 TraesCS7D01G328300 chr7B 435787044 435792251 5207 False 779.162500 1982 91.056375 771 5539 8 chr7B.!!$F2 4768
6 TraesCS7D01G328300 chr6A 595023897 595025223 1326 True 703.500000 941 88.236500 2980 4238 2 chr6A.!!$R2 1258
7 TraesCS7D01G328300 chr6A 595047462 595052087 4625 True 495.666667 889 89.038000 1146 4238 3 chr6A.!!$R3 3092
8 TraesCS7D01G328300 chr6A 595076225 595076947 722 False 283.000000 329 91.742500 3751 4239 2 chr6A.!!$F1 488
9 TraesCS7D01G328300 chr6D 449186775 449189445 2670 True 511.000000 898 92.140500 1158 3662 2 chr6D.!!$R3 2504
10 TraesCS7D01G328300 chr6D 449216343 449216843 500 True 481.000000 481 84.160000 3737 4253 1 chr6D.!!$R1 516
11 TraesCS7D01G328300 chr6B 680860970 680862723 1753 False 484.000000 894 90.972667 2994 4238 3 chr6B.!!$F1 1244


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
769 771 0.038744 AAATCACCAGAGGCCCTGTG 59.961 55.0 16.96 0.0 41.33 3.66 F
1827 3033 0.317269 CAGTGGCGTTGCTTTCACAG 60.317 55.0 0.00 0.0 33.01 3.66 F
2725 4768 0.035176 TTGCAGCCCAAGAATTTGCC 59.965 50.0 0.00 0.0 33.98 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2278 4038 0.107654 ATCTACCGTTGAGGCTTGCC 60.108 55.000 2.97 2.97 46.52 4.52 R
3619 6712 1.891919 GGCGTCCTTGCTGACAACA 60.892 57.895 0.00 0.00 34.88 3.33 R
4678 8752 0.242825 CTCGGGACACGCTTGTTAGA 59.757 55.000 0.00 0.00 43.86 2.10 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.657956 GTGAGATCTCCCAAGCGAG 57.342 57.895 20.03 0.00 0.00 5.03
19 20 0.103937 GTGAGATCTCCCAAGCGAGG 59.896 60.000 20.03 0.00 0.00 4.63
20 21 0.324738 TGAGATCTCCCAAGCGAGGT 60.325 55.000 20.03 0.00 0.00 3.85
21 22 0.827368 GAGATCTCCCAAGCGAGGTT 59.173 55.000 12.00 0.00 0.00 3.50
22 23 2.032620 GAGATCTCCCAAGCGAGGTTA 58.967 52.381 12.00 0.00 0.00 2.85
23 24 2.431057 GAGATCTCCCAAGCGAGGTTAA 59.569 50.000 12.00 0.00 0.00 2.01
24 25 2.838202 AGATCTCCCAAGCGAGGTTAAA 59.162 45.455 0.00 0.00 0.00 1.52
25 26 3.456277 AGATCTCCCAAGCGAGGTTAAAT 59.544 43.478 0.00 0.00 0.00 1.40
26 27 2.985896 TCTCCCAAGCGAGGTTAAATG 58.014 47.619 0.00 0.00 0.00 2.32
27 28 2.017049 CTCCCAAGCGAGGTTAAATGG 58.983 52.381 0.00 0.00 0.00 3.16
28 29 1.353022 TCCCAAGCGAGGTTAAATGGT 59.647 47.619 0.00 0.00 0.00 3.55
29 30 2.167662 CCCAAGCGAGGTTAAATGGTT 58.832 47.619 0.00 0.00 0.00 3.67
30 31 2.560981 CCCAAGCGAGGTTAAATGGTTT 59.439 45.455 0.00 0.00 0.00 3.27
31 32 3.574614 CCAAGCGAGGTTAAATGGTTTG 58.425 45.455 0.00 0.00 0.00 2.93
32 33 3.574614 CAAGCGAGGTTAAATGGTTTGG 58.425 45.455 0.00 0.00 0.00 3.28
33 34 1.544246 AGCGAGGTTAAATGGTTTGGC 59.456 47.619 0.00 0.00 0.00 4.52
34 35 1.271102 GCGAGGTTAAATGGTTTGGCA 59.729 47.619 0.00 0.00 0.00 4.92
35 36 2.288518 GCGAGGTTAAATGGTTTGGCAA 60.289 45.455 0.00 0.00 0.00 4.52
36 37 3.313690 CGAGGTTAAATGGTTTGGCAAC 58.686 45.455 0.00 0.00 0.00 4.17
37 38 3.005367 CGAGGTTAAATGGTTTGGCAACT 59.995 43.478 0.00 0.00 32.90 3.16
38 39 4.500716 CGAGGTTAAATGGTTTGGCAACTT 60.501 41.667 0.00 0.00 32.90 2.66
39 40 5.278561 CGAGGTTAAATGGTTTGGCAACTTA 60.279 40.000 0.00 0.00 32.90 2.24
40 41 6.487299 AGGTTAAATGGTTTGGCAACTTAA 57.513 33.333 0.00 0.00 32.90 1.85
41 42 7.073457 AGGTTAAATGGTTTGGCAACTTAAT 57.927 32.000 0.00 0.00 32.90 1.40
42 43 8.196378 AGGTTAAATGGTTTGGCAACTTAATA 57.804 30.769 0.00 0.00 32.90 0.98
43 44 8.092068 AGGTTAAATGGTTTGGCAACTTAATAC 58.908 33.333 0.00 0.00 32.90 1.89
44 45 7.873505 GGTTAAATGGTTTGGCAACTTAATACA 59.126 33.333 0.00 0.00 32.90 2.29
45 46 9.430623 GTTAAATGGTTTGGCAACTTAATACAT 57.569 29.630 0.00 0.00 32.90 2.29
47 48 7.903995 AATGGTTTGGCAACTTAATACATTG 57.096 32.000 0.00 0.00 32.90 2.82
48 49 6.656632 TGGTTTGGCAACTTAATACATTGA 57.343 33.333 0.00 0.00 32.90 2.57
49 50 7.055667 TGGTTTGGCAACTTAATACATTGAA 57.944 32.000 0.00 0.00 32.90 2.69
50 51 7.500992 TGGTTTGGCAACTTAATACATTGAAA 58.499 30.769 0.00 0.00 32.90 2.69
51 52 7.987458 TGGTTTGGCAACTTAATACATTGAAAA 59.013 29.630 0.00 0.00 32.90 2.29
52 53 8.279800 GGTTTGGCAACTTAATACATTGAAAAC 58.720 33.333 0.00 0.00 34.26 2.43
53 54 8.821894 GTTTGGCAACTTAATACATTGAAAACA 58.178 29.630 0.00 0.00 34.68 2.83
54 55 8.948631 TTGGCAACTTAATACATTGAAAACAA 57.051 26.923 0.00 0.00 37.61 2.83
55 56 8.948631 TGGCAACTTAATACATTGAAAACAAA 57.051 26.923 0.00 0.00 37.61 2.83
56 57 9.553064 TGGCAACTTAATACATTGAAAACAAAT 57.447 25.926 0.00 0.00 37.61 2.32
66 67 6.770076 ACATTGAAAACAAATTGTTGAACCG 58.230 32.000 12.50 3.01 40.14 4.44
67 68 5.786401 TTGAAAACAAATTGTTGAACCGG 57.214 34.783 12.50 0.00 40.14 5.28
68 69 5.073311 TGAAAACAAATTGTTGAACCGGA 57.927 34.783 12.50 0.00 40.14 5.14
69 70 5.665459 TGAAAACAAATTGTTGAACCGGAT 58.335 33.333 12.50 0.00 40.14 4.18
70 71 6.109359 TGAAAACAAATTGTTGAACCGGATT 58.891 32.000 12.50 0.00 40.14 3.01
71 72 5.982465 AAACAAATTGTTGAACCGGATTG 57.018 34.783 12.50 1.60 40.14 2.67
72 73 4.927978 ACAAATTGTTGAACCGGATTGA 57.072 36.364 9.46 0.00 38.20 2.57
73 74 5.467035 ACAAATTGTTGAACCGGATTGAT 57.533 34.783 9.46 0.00 38.20 2.57
74 75 6.582677 ACAAATTGTTGAACCGGATTGATA 57.417 33.333 9.46 0.00 38.20 2.15
75 76 7.169158 ACAAATTGTTGAACCGGATTGATAT 57.831 32.000 9.46 0.00 38.20 1.63
76 77 7.257722 ACAAATTGTTGAACCGGATTGATATC 58.742 34.615 9.46 0.00 38.20 1.63
77 78 7.093988 ACAAATTGTTGAACCGGATTGATATCA 60.094 33.333 9.46 0.00 38.20 2.15
78 79 7.403312 AATTGTTGAACCGGATTGATATCAA 57.597 32.000 20.07 20.07 40.51 2.57
79 80 6.825944 TTGTTGAACCGGATTGATATCAAA 57.174 33.333 21.50 6.19 39.55 2.69
80 81 6.435430 TGTTGAACCGGATTGATATCAAAG 57.565 37.500 21.50 14.97 39.55 2.77
81 82 5.356751 TGTTGAACCGGATTGATATCAAAGG 59.643 40.000 21.50 23.31 39.55 3.11
82 83 5.366482 TGAACCGGATTGATATCAAAGGA 57.634 39.130 29.12 14.57 39.55 3.36
83 84 5.750524 TGAACCGGATTGATATCAAAGGAA 58.249 37.500 29.12 18.06 39.55 3.36
84 85 6.184068 TGAACCGGATTGATATCAAAGGAAA 58.816 36.000 29.12 17.83 39.55 3.13
85 86 6.661377 TGAACCGGATTGATATCAAAGGAAAA 59.339 34.615 29.12 17.61 39.55 2.29
86 87 7.341769 TGAACCGGATTGATATCAAAGGAAAAT 59.658 33.333 29.12 18.28 39.55 1.82
87 88 7.042797 ACCGGATTGATATCAAAGGAAAATG 57.957 36.000 29.12 14.86 39.55 2.32
88 89 5.922544 CCGGATTGATATCAAAGGAAAATGC 59.077 40.000 21.50 8.11 39.55 3.56
89 90 6.461370 CCGGATTGATATCAAAGGAAAATGCA 60.461 38.462 21.50 0.00 39.55 3.96
90 91 7.149973 CGGATTGATATCAAAGGAAAATGCAT 58.850 34.615 21.50 0.00 39.55 3.96
91 92 7.327761 CGGATTGATATCAAAGGAAAATGCATC 59.672 37.037 21.50 9.86 39.55 3.91
92 93 7.601508 GGATTGATATCAAAGGAAAATGCATCC 59.398 37.037 21.50 14.56 39.55 3.51
94 95 8.765488 TTGATATCAAAGGAAAATGCATCCTA 57.235 30.769 15.82 0.00 46.65 2.94
95 96 8.169977 TGATATCAAAGGAAAATGCATCCTAC 57.830 34.615 7.77 0.00 46.65 3.18
96 97 5.859205 ATCAAAGGAAAATGCATCCTACC 57.141 39.130 7.77 6.01 46.65 3.18
97 98 4.671831 TCAAAGGAAAATGCATCCTACCA 58.328 39.130 7.77 0.00 46.65 3.25
98 99 4.462483 TCAAAGGAAAATGCATCCTACCAC 59.538 41.667 7.77 0.00 46.65 4.16
99 100 3.018423 AGGAAAATGCATCCTACCACC 57.982 47.619 5.51 1.05 45.51 4.61
100 101 2.582636 AGGAAAATGCATCCTACCACCT 59.417 45.455 5.51 3.20 45.51 4.00
101 102 3.785887 AGGAAAATGCATCCTACCACCTA 59.214 43.478 5.51 0.00 45.51 3.08
102 103 4.137543 GGAAAATGCATCCTACCACCTAG 58.862 47.826 0.00 0.00 33.98 3.02
103 104 3.864789 AAATGCATCCTACCACCTAGG 57.135 47.619 7.41 7.41 43.54 3.02
104 105 1.734655 ATGCATCCTACCACCTAGGG 58.265 55.000 14.81 1.73 42.51 3.53
105 106 0.399949 TGCATCCTACCACCTAGGGG 60.400 60.000 14.81 9.46 42.51 4.79
107 108 1.132945 GCATCCTACCACCTAGGGGTA 60.133 57.143 21.33 21.33 45.41 3.69
108 109 2.694920 GCATCCTACCACCTAGGGGTAA 60.695 54.545 22.31 13.57 45.41 2.85
109 110 3.870559 CATCCTACCACCTAGGGGTAAT 58.129 50.000 22.31 14.78 45.41 1.89
110 111 4.240323 CATCCTACCACCTAGGGGTAATT 58.760 47.826 22.31 12.01 45.41 1.40
111 112 5.408824 CATCCTACCACCTAGGGGTAATTA 58.591 45.833 22.31 14.36 45.41 1.40
112 113 4.819610 TCCTACCACCTAGGGGTAATTAC 58.180 47.826 22.31 7.09 45.41 1.89
113 114 3.906218 CCTACCACCTAGGGGTAATTACC 59.094 52.174 24.19 24.19 45.41 2.85
125 126 4.497291 GGTAATTACCCCACATGTCTCA 57.503 45.455 22.15 0.00 40.53 3.27
126 127 5.048846 GGTAATTACCCCACATGTCTCAT 57.951 43.478 22.15 0.00 40.53 2.90
127 128 6.182507 GGTAATTACCCCACATGTCTCATA 57.817 41.667 22.15 0.00 40.53 2.15
128 129 6.779860 GGTAATTACCCCACATGTCTCATAT 58.220 40.000 22.15 0.00 40.53 1.78
129 130 7.913789 GGTAATTACCCCACATGTCTCATATA 58.086 38.462 22.15 0.00 40.53 0.86
130 131 7.822822 GGTAATTACCCCACATGTCTCATATAC 59.177 40.741 22.15 0.00 40.53 1.47
131 132 7.633018 AATTACCCCACATGTCTCATATACT 57.367 36.000 0.00 0.00 0.00 2.12
132 133 8.736097 AATTACCCCACATGTCTCATATACTA 57.264 34.615 0.00 0.00 0.00 1.82
133 134 8.917414 ATTACCCCACATGTCTCATATACTAT 57.083 34.615 0.00 0.00 0.00 2.12
134 135 6.859112 ACCCCACATGTCTCATATACTATC 57.141 41.667 0.00 0.00 0.00 2.08
135 136 6.322931 ACCCCACATGTCTCATATACTATCA 58.677 40.000 0.00 0.00 0.00 2.15
136 137 6.962311 ACCCCACATGTCTCATATACTATCAT 59.038 38.462 0.00 0.00 0.00 2.45
137 138 7.093156 ACCCCACATGTCTCATATACTATCATG 60.093 40.741 0.00 0.00 37.68 3.07
138 139 7.093156 CCCCACATGTCTCATATACTATCATGT 60.093 40.741 0.00 0.00 42.92 3.21
239 240 5.559148 AAAAATTGTAAGTTGGCCCATGA 57.441 34.783 0.00 0.00 0.00 3.07
240 241 5.760484 AAAATTGTAAGTTGGCCCATGAT 57.240 34.783 0.00 0.00 0.00 2.45
241 242 5.760484 AAATTGTAAGTTGGCCCATGATT 57.240 34.783 0.00 0.00 0.00 2.57
242 243 5.760484 AATTGTAAGTTGGCCCATGATTT 57.240 34.783 0.00 0.00 0.00 2.17
243 244 5.760484 ATTGTAAGTTGGCCCATGATTTT 57.240 34.783 0.00 0.00 0.00 1.82
244 245 5.559148 TTGTAAGTTGGCCCATGATTTTT 57.441 34.783 0.00 0.00 0.00 1.94
245 246 6.672266 TTGTAAGTTGGCCCATGATTTTTA 57.328 33.333 0.00 0.00 0.00 1.52
246 247 6.865834 TGTAAGTTGGCCCATGATTTTTAT 57.134 33.333 0.00 0.00 0.00 1.40
247 248 7.251321 TGTAAGTTGGCCCATGATTTTTATT 57.749 32.000 0.00 0.00 0.00 1.40
248 249 8.367660 TGTAAGTTGGCCCATGATTTTTATTA 57.632 30.769 0.00 0.00 0.00 0.98
249 250 8.986991 TGTAAGTTGGCCCATGATTTTTATTAT 58.013 29.630 0.00 0.00 0.00 1.28
256 257 9.775854 TGGCCCATGATTTTTATTATATTTGTG 57.224 29.630 0.00 0.00 0.00 3.33
257 258 9.995003 GGCCCATGATTTTTATTATATTTGTGA 57.005 29.630 0.00 0.00 0.00 3.58
310 311 9.772973 AAACTGAAAATACGATATATGCTACCA 57.227 29.630 0.00 0.00 0.00 3.25
311 312 9.772973 AACTGAAAATACGATATATGCTACCAA 57.227 29.630 0.00 0.00 0.00 3.67
312 313 9.772973 ACTGAAAATACGATATATGCTACCAAA 57.227 29.630 0.00 0.00 0.00 3.28
373 374 8.586570 ACTACATACTACACGTACATACTCTC 57.413 38.462 0.00 0.00 0.00 3.20
374 375 6.857777 ACATACTACACGTACATACTCTCC 57.142 41.667 0.00 0.00 0.00 3.71
375 376 5.464722 ACATACTACACGTACATACTCTCCG 59.535 44.000 0.00 0.00 0.00 4.63
376 377 4.128925 ACTACACGTACATACTCTCCGA 57.871 45.455 0.00 0.00 0.00 4.55
377 378 4.701765 ACTACACGTACATACTCTCCGAT 58.298 43.478 0.00 0.00 0.00 4.18
378 379 5.121811 ACTACACGTACATACTCTCCGATT 58.878 41.667 0.00 0.00 0.00 3.34
379 380 4.978083 ACACGTACATACTCTCCGATTT 57.022 40.909 0.00 0.00 0.00 2.17
380 381 4.669318 ACACGTACATACTCTCCGATTTG 58.331 43.478 0.00 0.00 0.00 2.32
381 382 4.397103 ACACGTACATACTCTCCGATTTGA 59.603 41.667 0.00 0.00 0.00 2.69
382 383 5.067413 ACACGTACATACTCTCCGATTTGAT 59.933 40.000 0.00 0.00 0.00 2.57
383 384 6.261603 ACACGTACATACTCTCCGATTTGATA 59.738 38.462 0.00 0.00 0.00 2.15
384 385 7.040617 ACACGTACATACTCTCCGATTTGATAT 60.041 37.037 0.00 0.00 0.00 1.63
385 386 8.448615 CACGTACATACTCTCCGATTTGATATA 58.551 37.037 0.00 0.00 0.00 0.86
386 387 9.175312 ACGTACATACTCTCCGATTTGATATAT 57.825 33.333 0.00 0.00 0.00 0.86
422 423 8.254178 TGATTTTGGATGCATTTTACATTCAC 57.746 30.769 0.00 0.00 32.68 3.18
423 424 7.876582 TGATTTTGGATGCATTTTACATTCACA 59.123 29.630 0.00 0.00 32.68 3.58
424 425 7.418840 TTTTGGATGCATTTTACATTCACAC 57.581 32.000 0.00 0.00 32.68 3.82
425 426 5.718724 TGGATGCATTTTACATTCACACA 57.281 34.783 0.00 0.00 27.75 3.72
426 427 6.283544 TGGATGCATTTTACATTCACACAT 57.716 33.333 0.00 0.00 27.75 3.21
427 428 7.401955 TGGATGCATTTTACATTCACACATA 57.598 32.000 0.00 0.00 27.75 2.29
428 429 8.009622 TGGATGCATTTTACATTCACACATAT 57.990 30.769 0.00 0.00 27.75 1.78
429 430 7.921745 TGGATGCATTTTACATTCACACATATG 59.078 33.333 0.00 0.00 27.75 1.78
430 431 8.136800 GGATGCATTTTACATTCACACATATGA 58.863 33.333 10.38 0.00 0.00 2.15
431 432 9.518906 GATGCATTTTACATTCACACATATGAA 57.481 29.630 10.38 0.00 42.62 2.57
432 433 9.872721 ATGCATTTTACATTCACACATATGAAA 57.127 25.926 10.38 0.00 41.78 2.69
433 434 9.138062 TGCATTTTACATTCACACATATGAAAC 57.862 29.630 10.38 0.00 41.78 2.78
434 435 9.138062 GCATTTTACATTCACACATATGAAACA 57.862 29.630 10.38 0.00 41.78 2.83
465 466 8.855804 TTTTATGTTTATATTAAAGGGCCCCA 57.144 30.769 21.43 4.52 0.00 4.96
466 467 8.485578 TTTATGTTTATATTAAAGGGCCCCAG 57.514 34.615 21.43 0.00 0.00 4.45
467 468 4.810345 TGTTTATATTAAAGGGCCCCAGG 58.190 43.478 21.43 0.00 0.00 4.45
478 479 4.617875 CCCCAGGCACTAGTTTCG 57.382 61.111 0.00 0.00 36.02 3.46
479 480 1.677552 CCCCAGGCACTAGTTTCGT 59.322 57.895 0.00 0.00 36.02 3.85
480 481 0.391263 CCCCAGGCACTAGTTTCGTC 60.391 60.000 0.00 0.00 36.02 4.20
481 482 0.391263 CCCAGGCACTAGTTTCGTCC 60.391 60.000 0.00 0.00 36.02 4.79
482 483 0.391263 CCAGGCACTAGTTTCGTCCC 60.391 60.000 0.00 0.00 36.02 4.46
483 484 0.736325 CAGGCACTAGTTTCGTCCCG 60.736 60.000 0.00 0.00 36.02 5.14
484 485 1.447314 GGCACTAGTTTCGTCCCGG 60.447 63.158 0.00 0.00 0.00 5.73
485 486 1.447314 GCACTAGTTTCGTCCCGGG 60.447 63.158 16.85 16.85 0.00 5.73
486 487 1.447314 CACTAGTTTCGTCCCGGGC 60.447 63.158 18.49 10.58 0.00 6.13
487 488 2.186125 CTAGTTTCGTCCCGGGCC 59.814 66.667 18.49 2.05 0.00 5.80
488 489 3.381333 CTAGTTTCGTCCCGGGCCC 62.381 68.421 18.49 13.57 0.00 5.80
500 501 4.900815 GGGCCCCGAAATCTTAGG 57.099 61.111 12.23 0.00 0.00 2.69
501 502 2.227737 GGGCCCCGAAATCTTAGGA 58.772 57.895 12.23 0.00 0.00 2.94
502 503 0.179026 GGGCCCCGAAATCTTAGGAC 60.179 60.000 12.23 0.00 0.00 3.85
503 504 0.179026 GGCCCCGAAATCTTAGGACC 60.179 60.000 0.00 0.00 0.00 4.46
504 505 0.532196 GCCCCGAAATCTTAGGACCG 60.532 60.000 0.00 0.00 0.00 4.79
505 506 0.106149 CCCCGAAATCTTAGGACCGG 59.894 60.000 0.00 0.00 34.41 5.28
506 507 0.106149 CCCGAAATCTTAGGACCGGG 59.894 60.000 6.32 13.98 41.93 5.73
507 508 0.532196 CCGAAATCTTAGGACCGGGC 60.532 60.000 6.32 0.21 32.51 6.13
508 509 0.532196 CGAAATCTTAGGACCGGGCC 60.532 60.000 22.85 22.85 0.00 5.80
509 510 0.179026 GAAATCTTAGGACCGGGCCC 60.179 60.000 27.30 13.57 0.00 5.80
510 511 1.979619 AAATCTTAGGACCGGGCCCG 61.980 60.000 37.99 37.99 39.44 6.13
527 528 4.404654 GCACGGCGCCTTTTCCTG 62.405 66.667 26.68 9.51 32.94 3.86
528 529 2.978010 CACGGCGCCTTTTCCTGT 60.978 61.111 26.68 10.27 0.00 4.00
529 530 2.978010 ACGGCGCCTTTTCCTGTG 60.978 61.111 26.68 7.84 0.00 3.66
530 531 4.404654 CGGCGCCTTTTCCTGTGC 62.405 66.667 26.68 0.00 37.27 4.57
531 532 2.985847 GGCGCCTTTTCCTGTGCT 60.986 61.111 22.15 0.00 38.06 4.40
532 533 1.674322 GGCGCCTTTTCCTGTGCTA 60.674 57.895 22.15 0.00 38.06 3.49
533 534 1.241315 GGCGCCTTTTCCTGTGCTAA 61.241 55.000 22.15 0.00 38.06 3.09
534 535 0.169009 GCGCCTTTTCCTGTGCTAAG 59.831 55.000 0.00 0.00 35.20 2.18
535 536 0.804989 CGCCTTTTCCTGTGCTAAGG 59.195 55.000 0.00 0.00 40.08 2.69
536 537 1.610624 CGCCTTTTCCTGTGCTAAGGA 60.611 52.381 0.00 4.04 44.88 3.36
545 546 4.787551 TCCTGTGCTAAGGAAAAAGAACA 58.212 39.130 5.57 0.00 43.57 3.18
546 547 5.385198 TCCTGTGCTAAGGAAAAAGAACAT 58.615 37.500 5.57 0.00 43.57 2.71
547 548 5.833131 TCCTGTGCTAAGGAAAAAGAACATT 59.167 36.000 5.57 0.00 43.57 2.71
548 549 5.922544 CCTGTGCTAAGGAAAAAGAACATTG 59.077 40.000 0.00 0.00 40.02 2.82
549 550 6.239008 CCTGTGCTAAGGAAAAAGAACATTGA 60.239 38.462 0.00 0.00 40.02 2.57
550 551 7.106439 TGTGCTAAGGAAAAAGAACATTGAA 57.894 32.000 0.00 0.00 0.00 2.69
551 552 7.725251 TGTGCTAAGGAAAAAGAACATTGAAT 58.275 30.769 0.00 0.00 0.00 2.57
552 553 8.203485 TGTGCTAAGGAAAAAGAACATTGAATT 58.797 29.630 0.00 0.00 0.00 2.17
553 554 9.045223 GTGCTAAGGAAAAAGAACATTGAATTT 57.955 29.630 0.00 0.00 0.00 1.82
554 555 9.044150 TGCTAAGGAAAAAGAACATTGAATTTG 57.956 29.630 0.00 0.00 0.00 2.32
555 556 9.045223 GCTAAGGAAAAAGAACATTGAATTTGT 57.955 29.630 0.00 0.00 0.00 2.83
559 560 8.892723 AGGAAAAAGAACATTGAATTTGTTTCC 58.107 29.630 0.00 0.00 37.43 3.13
560 561 8.128582 GGAAAAAGAACATTGAATTTGTTTCCC 58.871 33.333 0.00 0.00 37.43 3.97
561 562 8.572855 AAAAAGAACATTGAATTTGTTTCCCA 57.427 26.923 0.00 0.00 37.43 4.37
562 563 7.552458 AAAGAACATTGAATTTGTTTCCCAC 57.448 32.000 0.00 0.00 37.43 4.61
563 564 5.288804 AGAACATTGAATTTGTTTCCCACG 58.711 37.500 0.00 0.00 37.43 4.94
564 565 3.389221 ACATTGAATTTGTTTCCCACGC 58.611 40.909 0.00 0.00 33.04 5.34
565 566 2.126914 TTGAATTTGTTTCCCACGCG 57.873 45.000 3.53 3.53 33.04 6.01
566 567 1.025812 TGAATTTGTTTCCCACGCGT 58.974 45.000 5.58 5.58 33.04 6.01
567 568 2.219458 TGAATTTGTTTCCCACGCGTA 58.781 42.857 13.44 0.00 33.04 4.42
568 569 2.814919 TGAATTTGTTTCCCACGCGTAT 59.185 40.909 13.44 0.00 33.04 3.06
569 570 3.120130 TGAATTTGTTTCCCACGCGTATC 60.120 43.478 13.44 0.00 33.04 2.24
570 571 2.172851 TTTGTTTCCCACGCGTATCT 57.827 45.000 13.44 0.00 0.00 1.98
571 572 2.172851 TTGTTTCCCACGCGTATCTT 57.827 45.000 13.44 0.00 0.00 2.40
572 573 2.172851 TGTTTCCCACGCGTATCTTT 57.827 45.000 13.44 0.00 0.00 2.52
573 574 2.496111 TGTTTCCCACGCGTATCTTTT 58.504 42.857 13.44 0.00 0.00 2.27
574 575 2.879646 TGTTTCCCACGCGTATCTTTTT 59.120 40.909 13.44 0.00 0.00 1.94
575 576 3.231160 GTTTCCCACGCGTATCTTTTTG 58.769 45.455 13.44 0.00 0.00 2.44
576 577 2.172851 TCCCACGCGTATCTTTTTGT 57.827 45.000 13.44 0.00 0.00 2.83
577 578 2.496111 TCCCACGCGTATCTTTTTGTT 58.504 42.857 13.44 0.00 0.00 2.83
578 579 2.224549 TCCCACGCGTATCTTTTTGTTG 59.775 45.455 13.44 0.00 0.00 3.33
579 580 2.031508 CCCACGCGTATCTTTTTGTTGT 60.032 45.455 13.44 0.00 0.00 3.32
580 581 3.549221 CCCACGCGTATCTTTTTGTTGTT 60.549 43.478 13.44 0.00 0.00 2.83
581 582 3.420576 CCACGCGTATCTTTTTGTTGTTG 59.579 43.478 13.44 0.00 0.00 3.33
582 583 4.032355 CACGCGTATCTTTTTGTTGTTGT 58.968 39.130 13.44 0.00 0.00 3.32
583 584 4.497608 CACGCGTATCTTTTTGTTGTTGTT 59.502 37.500 13.44 0.00 0.00 2.83
584 585 4.497608 ACGCGTATCTTTTTGTTGTTGTTG 59.502 37.500 11.67 0.00 0.00 3.33
585 586 4.731000 CGCGTATCTTTTTGTTGTTGTTGA 59.269 37.500 0.00 0.00 0.00 3.18
586 587 5.108780 CGCGTATCTTTTTGTTGTTGTTGAG 60.109 40.000 0.00 0.00 0.00 3.02
587 588 5.968848 GCGTATCTTTTTGTTGTTGTTGAGA 59.031 36.000 0.00 0.00 0.00 3.27
588 589 6.470877 GCGTATCTTTTTGTTGTTGTTGAGAA 59.529 34.615 0.00 0.00 0.00 2.87
589 590 7.513041 GCGTATCTTTTTGTTGTTGTTGAGAAC 60.513 37.037 0.00 0.00 32.41 3.01
590 591 7.696453 CGTATCTTTTTGTTGTTGTTGAGAACT 59.304 33.333 0.00 0.00 32.96 3.01
591 592 9.353999 GTATCTTTTTGTTGTTGTTGAGAACTT 57.646 29.630 0.00 0.00 32.96 2.66
592 593 8.831715 ATCTTTTTGTTGTTGTTGAGAACTTT 57.168 26.923 0.00 0.00 32.96 2.66
593 594 9.921637 ATCTTTTTGTTGTTGTTGAGAACTTTA 57.078 25.926 0.00 0.00 32.96 1.85
594 595 9.921637 TCTTTTTGTTGTTGTTGAGAACTTTAT 57.078 25.926 0.00 0.00 32.96 1.40
595 596 9.956797 CTTTTTGTTGTTGTTGAGAACTTTATG 57.043 29.630 0.00 0.00 32.96 1.90
596 597 9.698309 TTTTTGTTGTTGTTGAGAACTTTATGA 57.302 25.926 0.00 0.00 32.96 2.15
597 598 8.682128 TTTGTTGTTGTTGAGAACTTTATGAC 57.318 30.769 0.00 0.00 32.96 3.06
598 599 7.624360 TGTTGTTGTTGAGAACTTTATGACT 57.376 32.000 0.00 0.00 32.96 3.41
599 600 8.050778 TGTTGTTGTTGAGAACTTTATGACTT 57.949 30.769 0.00 0.00 32.96 3.01
600 601 7.967854 TGTTGTTGTTGAGAACTTTATGACTTG 59.032 33.333 0.00 0.00 32.96 3.16
601 602 7.857734 TGTTGTTGAGAACTTTATGACTTGA 57.142 32.000 0.00 0.00 0.00 3.02
602 603 8.450578 TGTTGTTGAGAACTTTATGACTTGAT 57.549 30.769 0.00 0.00 0.00 2.57
603 604 9.554395 TGTTGTTGAGAACTTTATGACTTGATA 57.446 29.630 0.00 0.00 0.00 2.15
606 607 9.725019 TGTTGAGAACTTTATGACTTGATATGT 57.275 29.630 0.00 0.00 0.00 2.29
608 609 9.942850 TTGAGAACTTTATGACTTGATATGTCA 57.057 29.630 0.00 0.00 46.58 3.58
609 610 9.591792 TGAGAACTTTATGACTTGATATGTCAG 57.408 33.333 0.00 0.00 45.88 3.51
610 611 9.809096 GAGAACTTTATGACTTGATATGTCAGA 57.191 33.333 0.00 0.00 45.88 3.27
619 620 8.175925 TGACTTGATATGTCAGAAGATAGAGG 57.824 38.462 0.00 0.00 39.23 3.69
620 621 8.001292 TGACTTGATATGTCAGAAGATAGAGGA 58.999 37.037 0.00 0.00 39.23 3.71
621 622 8.954834 ACTTGATATGTCAGAAGATAGAGGAT 57.045 34.615 0.00 0.00 35.39 3.24
622 623 9.378504 ACTTGATATGTCAGAAGATAGAGGATT 57.621 33.333 0.00 0.00 35.39 3.01
623 624 9.642327 CTTGATATGTCAGAAGATAGAGGATTG 57.358 37.037 0.00 0.00 35.39 2.67
624 625 7.609960 TGATATGTCAGAAGATAGAGGATTGC 58.390 38.462 0.00 0.00 0.00 3.56
625 626 5.883685 ATGTCAGAAGATAGAGGATTGCA 57.116 39.130 0.00 0.00 0.00 4.08
626 627 5.682234 TGTCAGAAGATAGAGGATTGCAA 57.318 39.130 0.00 0.00 0.00 4.08
627 628 5.668471 TGTCAGAAGATAGAGGATTGCAAG 58.332 41.667 4.94 0.00 0.00 4.01
628 629 5.423290 TGTCAGAAGATAGAGGATTGCAAGA 59.577 40.000 4.94 0.00 0.00 3.02
629 630 6.099413 TGTCAGAAGATAGAGGATTGCAAGAT 59.901 38.462 4.94 0.00 0.00 2.40
630 631 6.646240 GTCAGAAGATAGAGGATTGCAAGATC 59.354 42.308 4.94 2.69 0.00 2.75
631 632 5.634439 CAGAAGATAGAGGATTGCAAGATCG 59.366 44.000 4.94 0.00 0.00 3.69
632 633 5.304101 AGAAGATAGAGGATTGCAAGATCGT 59.696 40.000 4.94 0.00 0.00 3.73
633 634 5.132897 AGATAGAGGATTGCAAGATCGTC 57.867 43.478 4.94 9.77 39.84 4.20
634 635 4.832266 AGATAGAGGATTGCAAGATCGTCT 59.168 41.667 22.11 22.11 46.87 4.18
636 637 4.314740 AGAGGATTGCAAGATCGTCTAC 57.685 45.455 18.85 0.00 44.81 2.59
637 638 3.701542 AGAGGATTGCAAGATCGTCTACA 59.298 43.478 18.85 0.00 44.81 2.74
638 639 4.160439 AGAGGATTGCAAGATCGTCTACAA 59.840 41.667 18.85 6.13 44.81 2.41
639 640 4.437239 AGGATTGCAAGATCGTCTACAAG 58.563 43.478 4.94 0.00 29.82 3.16
640 641 3.001736 GGATTGCAAGATCGTCTACAAGC 59.998 47.826 4.94 8.83 32.01 4.01
641 642 2.741759 TGCAAGATCGTCTACAAGCA 57.258 45.000 0.00 0.00 0.00 3.91
642 643 3.251479 TGCAAGATCGTCTACAAGCAT 57.749 42.857 0.00 0.00 0.00 3.79
643 644 4.385358 TGCAAGATCGTCTACAAGCATA 57.615 40.909 0.00 0.00 0.00 3.14
644 645 4.948847 TGCAAGATCGTCTACAAGCATAT 58.051 39.130 0.00 0.00 0.00 1.78
645 646 6.084326 TGCAAGATCGTCTACAAGCATATA 57.916 37.500 0.00 0.00 0.00 0.86
646 647 6.152379 TGCAAGATCGTCTACAAGCATATAG 58.848 40.000 0.00 0.00 0.00 1.31
647 648 6.016276 TGCAAGATCGTCTACAAGCATATAGA 60.016 38.462 0.00 0.00 0.00 1.98
648 649 7.032580 GCAAGATCGTCTACAAGCATATAGAT 58.967 38.462 0.00 0.00 30.35 1.98
649 650 7.009083 GCAAGATCGTCTACAAGCATATAGATG 59.991 40.741 0.00 0.00 36.26 2.90
650 651 7.929941 AGATCGTCTACAAGCATATAGATGA 57.070 36.000 0.39 1.92 43.94 2.92
651 652 8.341892 AGATCGTCTACAAGCATATAGATGAA 57.658 34.615 3.48 0.00 43.36 2.57
652 653 8.797438 AGATCGTCTACAAGCATATAGATGAAA 58.203 33.333 3.48 0.00 43.36 2.69
653 654 9.579768 GATCGTCTACAAGCATATAGATGAAAT 57.420 33.333 3.48 0.00 43.36 2.17
663 664 9.512588 AAGCATATAGATGAAATAAAGTCAGGG 57.487 33.333 0.39 0.00 34.73 4.45
664 665 8.884323 AGCATATAGATGAAATAAAGTCAGGGA 58.116 33.333 0.39 0.00 34.73 4.20
665 666 9.678260 GCATATAGATGAAATAAAGTCAGGGAT 57.322 33.333 0.39 0.00 34.73 3.85
668 669 6.581388 AGATGAAATAAAGTCAGGGATGGA 57.419 37.500 0.00 0.00 0.00 3.41
669 670 7.159201 AGATGAAATAAAGTCAGGGATGGAT 57.841 36.000 0.00 0.00 0.00 3.41
670 671 7.589993 AGATGAAATAAAGTCAGGGATGGATT 58.410 34.615 0.00 0.00 0.00 3.01
671 672 7.723172 AGATGAAATAAAGTCAGGGATGGATTC 59.277 37.037 0.00 0.00 0.00 2.52
672 673 6.730447 TGAAATAAAGTCAGGGATGGATTCA 58.270 36.000 0.00 0.00 0.00 2.57
673 674 7.356680 TGAAATAAAGTCAGGGATGGATTCAT 58.643 34.615 0.00 0.00 36.09 2.57
674 675 7.503566 TGAAATAAAGTCAGGGATGGATTCATC 59.496 37.037 5.30 5.30 46.78 2.92
687 688 2.860735 GGATTCATCCAGAAAGACGACG 59.139 50.000 0.51 0.00 46.38 5.12
688 689 3.428999 GGATTCATCCAGAAAGACGACGA 60.429 47.826 0.00 0.00 46.38 4.20
689 690 3.868757 TTCATCCAGAAAGACGACGAT 57.131 42.857 0.00 0.00 32.05 3.73
690 691 3.422417 TCATCCAGAAAGACGACGATC 57.578 47.619 0.00 0.00 0.00 3.69
691 692 3.017442 TCATCCAGAAAGACGACGATCT 58.983 45.455 0.00 0.00 0.00 2.75
692 693 4.196971 TCATCCAGAAAGACGACGATCTA 58.803 43.478 0.00 0.00 0.00 1.98
693 694 4.273724 TCATCCAGAAAGACGACGATCTAG 59.726 45.833 0.00 0.00 0.00 2.43
694 695 3.870274 TCCAGAAAGACGACGATCTAGA 58.130 45.455 0.00 0.00 0.00 2.43
695 696 3.872182 TCCAGAAAGACGACGATCTAGAG 59.128 47.826 0.00 0.00 0.00 2.43
696 697 3.002862 CCAGAAAGACGACGATCTAGAGG 59.997 52.174 0.00 0.00 0.00 3.69
697 698 3.623960 CAGAAAGACGACGATCTAGAGGT 59.376 47.826 0.00 0.00 0.00 3.85
698 699 4.809958 CAGAAAGACGACGATCTAGAGGTA 59.190 45.833 0.00 0.00 0.00 3.08
699 700 5.293814 CAGAAAGACGACGATCTAGAGGTAA 59.706 44.000 0.00 0.00 0.00 2.85
700 701 5.879223 AGAAAGACGACGATCTAGAGGTAAA 59.121 40.000 0.00 0.00 0.00 2.01
701 702 5.482686 AAGACGACGATCTAGAGGTAAAC 57.517 43.478 0.00 0.00 0.00 2.01
702 703 3.555139 AGACGACGATCTAGAGGTAAACG 59.445 47.826 0.00 2.22 0.00 3.60
703 704 2.031437 ACGACGATCTAGAGGTAAACGC 59.969 50.000 0.00 0.00 0.00 4.84
704 705 2.637595 GACGATCTAGAGGTAAACGCG 58.362 52.381 3.53 3.53 0.00 6.01
711 712 2.094762 AGAGGTAAACGCGCATCTTT 57.905 45.000 5.73 1.06 0.00 2.52
728 729 5.691754 GCATCTTTGTTTCGTTTTCATCCTT 59.308 36.000 0.00 0.00 0.00 3.36
748 750 0.827368 GGAGAGGGAAGAAGCGTGAT 59.173 55.000 0.00 0.00 0.00 3.06
749 751 1.472376 GGAGAGGGAAGAAGCGTGATG 60.472 57.143 0.00 0.00 0.00 3.07
750 752 1.478510 GAGAGGGAAGAAGCGTGATGA 59.521 52.381 0.00 0.00 0.00 2.92
752 754 2.303022 AGAGGGAAGAAGCGTGATGAAA 59.697 45.455 0.00 0.00 0.00 2.69
753 755 3.054802 AGAGGGAAGAAGCGTGATGAAAT 60.055 43.478 0.00 0.00 0.00 2.17
765 767 1.685148 GATGAAATCACCAGAGGCCC 58.315 55.000 0.00 0.00 44.70 5.80
766 768 1.213926 GATGAAATCACCAGAGGCCCT 59.786 52.381 0.00 0.00 44.70 5.19
767 769 0.329261 TGAAATCACCAGAGGCCCTG 59.671 55.000 12.83 12.83 42.55 4.45
768 770 0.329596 GAAATCACCAGAGGCCCTGT 59.670 55.000 16.96 5.78 41.33 4.00
769 771 0.038744 AAATCACCAGAGGCCCTGTG 59.961 55.000 16.96 0.00 41.33 3.66
813 815 2.185004 CAGGATGTTTTGTCCTCCGT 57.815 50.000 0.00 0.00 44.18 4.69
818 820 3.626217 GGATGTTTTGTCCTCCGTATTCC 59.374 47.826 0.00 0.00 32.85 3.01
869 875 0.531974 TGAAGAGCGTTCACACCCAC 60.532 55.000 1.01 0.00 0.00 4.61
870 876 1.557443 GAAGAGCGTTCACACCCACG 61.557 60.000 1.01 0.00 39.49 4.94
903 915 4.504916 CGAGTGGGCTGGAGCGAG 62.505 72.222 0.00 0.00 43.26 5.03
938 950 2.227089 GACTCGTCGATGGCCCACTT 62.227 60.000 0.00 0.00 0.00 3.16
940 952 2.819595 CGTCGATGGCCCACTTGG 60.820 66.667 0.00 0.00 37.09 3.61
1030 1046 1.557651 GAACGTCTAATCGCCTCACC 58.442 55.000 0.00 0.00 0.00 4.02
1035 1051 0.535335 TCTAATCGCCTCACCCACAC 59.465 55.000 0.00 0.00 0.00 3.82
1070 1086 6.710597 AAGGAAACAAAAACCTCCTAGAAC 57.289 37.500 0.00 0.00 37.31 3.01
1075 1091 4.386711 ACAAAAACCTCCTAGAACTTCCG 58.613 43.478 0.00 0.00 0.00 4.30
1085 1107 1.674651 GAACTTCCGGGGAGTTGCC 60.675 63.158 25.35 8.25 0.00 4.52
1126 1148 2.356278 GCTTCAGGATGGCACCCA 59.644 61.111 0.00 0.00 38.19 4.51
1127 1149 2.048603 GCTTCAGGATGGCACCCAC 61.049 63.158 0.00 0.00 35.80 4.61
1128 1150 1.746615 CTTCAGGATGGCACCCACG 60.747 63.158 0.00 0.00 35.80 4.94
1129 1151 3.266686 TTCAGGATGGCACCCACGG 62.267 63.158 0.00 0.00 35.80 4.94
1179 1213 2.617274 GCACACCAAGAAGGCGGTC 61.617 63.158 0.00 0.00 43.14 4.79
1271 1354 2.125326 CCATCTCCCCGTACGCAGA 61.125 63.158 10.49 10.77 0.00 4.26
1272 1355 1.065928 CATCTCCCCGTACGCAGAC 59.934 63.158 10.49 0.00 0.00 3.51
1285 1368 2.743928 CAGACTTCCGGTGCAGCC 60.744 66.667 10.90 2.64 0.00 4.85
1554 2255 9.530129 GAATAATCTATTCGCCTTAAATTGTCG 57.470 33.333 0.00 0.00 35.68 4.35
1555 2256 6.920569 AATCTATTCGCCTTAAATTGTCGT 57.079 33.333 0.00 0.00 0.00 4.34
1556 2257 5.712217 TCTATTCGCCTTAAATTGTCGTG 57.288 39.130 0.00 0.00 0.00 4.35
1557 2258 5.172934 TCTATTCGCCTTAAATTGTCGTGT 58.827 37.500 0.00 0.00 0.00 4.49
1558 2259 3.799137 TTCGCCTTAAATTGTCGTGTC 57.201 42.857 0.00 0.00 0.00 3.67
1611 2315 6.599244 TGGATCTTGATCTCGCAAAGTTAATT 59.401 34.615 10.03 0.00 0.00 1.40
1647 2351 2.416638 AGAGCAGCCCTCCAATATTCT 58.583 47.619 0.00 0.00 41.74 2.40
1652 2356 3.484407 CAGCCCTCCAATATTCTGAAGG 58.516 50.000 0.00 0.00 0.00 3.46
1663 2367 3.491766 ATTCTGAAGGTGACCTCCCTA 57.508 47.619 3.76 0.00 30.89 3.53
1671 2375 2.910977 AGGTGACCTCCCTACGATTTTT 59.089 45.455 0.00 0.00 0.00 1.94
1694 2398 3.621715 AGCGATTTCGTCTTGAATAACCC 59.378 43.478 1.55 0.00 42.22 4.11
1695 2399 3.621715 GCGATTTCGTCTTGAATAACCCT 59.378 43.478 1.55 0.00 42.22 4.34
1696 2400 4.260253 GCGATTTCGTCTTGAATAACCCTC 60.260 45.833 1.55 0.00 42.22 4.30
1698 2402 4.627284 TTTCGTCTTGAATAACCCTCCA 57.373 40.909 0.00 0.00 36.22 3.86
1702 2406 6.494666 TCGTCTTGAATAACCCTCCAATAT 57.505 37.500 0.00 0.00 0.00 1.28
1703 2407 6.895782 TCGTCTTGAATAACCCTCCAATATT 58.104 36.000 0.00 0.00 0.00 1.28
1704 2408 6.990349 TCGTCTTGAATAACCCTCCAATATTC 59.010 38.462 0.00 0.00 36.84 1.75
1705 2409 6.992715 CGTCTTGAATAACCCTCCAATATTCT 59.007 38.462 0.00 0.00 37.10 2.40
1706 2410 7.041780 CGTCTTGAATAACCCTCCAATATTCTG 60.042 40.741 0.00 0.00 37.10 3.02
1707 2411 7.993183 GTCTTGAATAACCCTCCAATATTCTGA 59.007 37.037 0.00 0.00 37.10 3.27
1708 2412 8.556589 TCTTGAATAACCCTCCAATATTCTGAA 58.443 33.333 0.00 0.00 37.10 3.02
1709 2413 8.752005 TTGAATAACCCTCCAATATTCTGAAG 57.248 34.615 0.00 0.00 37.10 3.02
1713 2417 4.111577 ACCCTCCAATATTCTGAAGGTGA 58.888 43.478 4.64 0.00 0.00 4.02
1715 2419 4.455606 CCTCCAATATTCTGAAGGTGACC 58.544 47.826 0.00 0.00 0.00 4.02
1716 2420 4.164988 CCTCCAATATTCTGAAGGTGACCT 59.835 45.833 0.00 0.00 33.87 3.85
1718 2422 4.164221 TCCAATATTCTGAAGGTGACCTCC 59.836 45.833 3.76 0.00 30.89 4.30
1720 2424 2.350863 ATTCTGAAGGTGACCTCCCT 57.649 50.000 3.76 0.00 30.89 4.20
1722 2426 2.233305 TCTGAAGGTGACCTCCCTAC 57.767 55.000 3.76 0.00 30.89 3.18
1723 2427 1.431633 TCTGAAGGTGACCTCCCTACA 59.568 52.381 3.76 0.13 30.89 2.74
1724 2428 2.158219 TCTGAAGGTGACCTCCCTACAA 60.158 50.000 3.76 0.00 30.89 2.41
1725 2429 2.840651 CTGAAGGTGACCTCCCTACAAT 59.159 50.000 3.76 0.00 30.89 2.71
1726 2430 3.256704 TGAAGGTGACCTCCCTACAATT 58.743 45.455 3.76 0.00 30.89 2.32
1727 2431 3.655777 TGAAGGTGACCTCCCTACAATTT 59.344 43.478 3.76 0.00 30.89 1.82
1728 2432 4.105697 TGAAGGTGACCTCCCTACAATTTT 59.894 41.667 3.76 0.00 30.89 1.82
1729 2433 4.741928 AGGTGACCTCCCTACAATTTTT 57.258 40.909 0.00 0.00 0.00 1.94
1730 2434 5.853572 AGGTGACCTCCCTACAATTTTTA 57.146 39.130 0.00 0.00 0.00 1.52
1732 2436 4.398358 GGTGACCTCCCTACAATTTTTAGC 59.602 45.833 0.00 0.00 0.00 3.09
1734 2438 4.020039 TGACCTCCCTACAATTTTTAGCGA 60.020 41.667 0.00 0.00 0.00 4.93
1735 2439 5.112129 ACCTCCCTACAATTTTTAGCGAT 57.888 39.130 0.00 0.00 0.00 4.58
1736 2440 5.506708 ACCTCCCTACAATTTTTAGCGATT 58.493 37.500 0.00 0.00 0.00 3.34
1738 2442 6.095021 ACCTCCCTACAATTTTTAGCGATTTC 59.905 38.462 0.00 0.00 0.00 2.17
1739 2443 6.114221 TCCCTACAATTTTTAGCGATTTCG 57.886 37.500 0.00 0.00 43.27 3.46
1740 2444 5.644636 TCCCTACAATTTTTAGCGATTTCGT 59.355 36.000 1.55 0.00 42.22 3.85
1741 2445 5.963586 CCCTACAATTTTTAGCGATTTCGTC 59.036 40.000 1.55 0.00 42.22 4.20
1743 2447 7.241376 CCTACAATTTTTAGCGATTTCGTCTT 58.759 34.615 1.55 0.00 42.22 3.01
1745 2449 6.664515 ACAATTTTTAGCGATTTCGTCTTGA 58.335 32.000 1.55 0.00 42.22 3.02
1746 2450 7.136119 ACAATTTTTAGCGATTTCGTCTTGAA 58.864 30.769 1.55 0.00 42.22 2.69
1822 3028 1.437160 CCAACAGTGGCGTTGCTTT 59.563 52.632 0.00 0.00 44.01 3.51
1827 3033 0.317269 CAGTGGCGTTGCTTTCACAG 60.317 55.000 0.00 0.00 33.01 3.66
1892 3106 6.318144 CAGAATAGTCTCTTTGGCATGTCAAT 59.682 38.462 14.57 0.00 28.78 2.57
2057 3744 7.809546 TGAATTATTGTGTGTCCAGTACAAA 57.190 32.000 0.00 0.00 40.63 2.83
2199 3899 4.389077 AGTTATTTGTCACTGTTAGCGAGC 59.611 41.667 0.00 0.00 0.00 5.03
2238 3998 3.997021 GTGTGTGTCTTCCCTTCTGTATG 59.003 47.826 0.00 0.00 0.00 2.39
2240 4000 4.836175 TGTGTGTCTTCCCTTCTGTATGTA 59.164 41.667 0.00 0.00 0.00 2.29
2245 4005 5.483937 TGTCTTCCCTTCTGTATGTATGTGT 59.516 40.000 0.00 0.00 0.00 3.72
2246 4006 5.812642 GTCTTCCCTTCTGTATGTATGTGTG 59.187 44.000 0.00 0.00 0.00 3.82
2247 4007 4.753516 TCCCTTCTGTATGTATGTGTGG 57.246 45.455 0.00 0.00 0.00 4.17
2248 4008 4.101114 TCCCTTCTGTATGTATGTGTGGT 58.899 43.478 0.00 0.00 0.00 4.16
2249 4009 5.274015 TCCCTTCTGTATGTATGTGTGGTA 58.726 41.667 0.00 0.00 0.00 3.25
2250 4010 5.903010 TCCCTTCTGTATGTATGTGTGGTAT 59.097 40.000 0.00 0.00 0.00 2.73
2251 4011 5.991606 CCCTTCTGTATGTATGTGTGGTATG 59.008 44.000 0.00 0.00 0.00 2.39
2252 4012 6.183360 CCCTTCTGTATGTATGTGTGGTATGA 60.183 42.308 0.00 0.00 0.00 2.15
2253 4013 7.272244 CCTTCTGTATGTATGTGTGGTATGAA 58.728 38.462 0.00 0.00 0.00 2.57
2254 4014 7.768582 CCTTCTGTATGTATGTGTGGTATGAAA 59.231 37.037 0.00 0.00 0.00 2.69
2255 4015 8.487313 TTCTGTATGTATGTGTGGTATGAAAC 57.513 34.615 0.00 0.00 0.00 2.78
2256 4016 7.847096 TCTGTATGTATGTGTGGTATGAAACT 58.153 34.615 0.00 0.00 0.00 2.66
2257 4017 8.973182 TCTGTATGTATGTGTGGTATGAAACTA 58.027 33.333 0.00 0.00 0.00 2.24
2258 4018 9.764363 CTGTATGTATGTGTGGTATGAAACTAT 57.236 33.333 0.00 0.00 0.00 2.12
2259 4019 9.541143 TGTATGTATGTGTGGTATGAAACTATG 57.459 33.333 0.00 0.00 0.00 2.23
2260 4020 9.758651 GTATGTATGTGTGGTATGAAACTATGA 57.241 33.333 0.00 0.00 0.00 2.15
2262 4022 9.851686 ATGTATGTGTGGTATGAAACTATGAAT 57.148 29.630 0.00 0.00 0.00 2.57
2263 4023 9.325198 TGTATGTGTGGTATGAAACTATGAATC 57.675 33.333 0.00 0.00 0.00 2.52
2264 4024 6.902224 TGTGTGGTATGAAACTATGAATCG 57.098 37.500 0.00 0.00 0.00 3.34
2265 4025 6.635755 TGTGTGGTATGAAACTATGAATCGA 58.364 36.000 0.00 0.00 0.00 3.59
2266 4026 6.756542 TGTGTGGTATGAAACTATGAATCGAG 59.243 38.462 0.00 0.00 0.00 4.04
2267 4027 6.757010 GTGTGGTATGAAACTATGAATCGAGT 59.243 38.462 0.00 0.00 0.00 4.18
2268 4028 7.277981 GTGTGGTATGAAACTATGAATCGAGTT 59.722 37.037 0.00 0.00 37.50 3.01
2269 4029 7.277760 TGTGGTATGAAACTATGAATCGAGTTG 59.722 37.037 1.80 0.00 36.05 3.16
2270 4030 6.257849 TGGTATGAAACTATGAATCGAGTTGC 59.742 38.462 1.80 1.01 36.05 4.17
2271 4031 6.480320 GGTATGAAACTATGAATCGAGTTGCT 59.520 38.462 7.19 0.00 36.05 3.91
2272 4032 6.595772 ATGAAACTATGAATCGAGTTGCTC 57.404 37.500 7.19 1.84 36.05 4.26
2273 4033 5.478407 TGAAACTATGAATCGAGTTGCTCA 58.522 37.500 7.19 3.86 36.05 4.26
2274 4034 6.108687 TGAAACTATGAATCGAGTTGCTCAT 58.891 36.000 7.19 0.00 36.05 2.90
2275 4035 5.980698 AACTATGAATCGAGTTGCTCATG 57.019 39.130 0.00 0.00 34.61 3.07
2276 4036 5.016051 ACTATGAATCGAGTTGCTCATGT 57.984 39.130 0.00 0.00 31.20 3.21
2277 4037 4.807834 ACTATGAATCGAGTTGCTCATGTG 59.192 41.667 0.00 0.00 31.20 3.21
2278 4038 2.349590 TGAATCGAGTTGCTCATGTGG 58.650 47.619 0.00 0.00 0.00 4.17
2279 4039 1.667724 GAATCGAGTTGCTCATGTGGG 59.332 52.381 0.00 0.00 0.00 4.61
2280 4040 0.745845 ATCGAGTTGCTCATGTGGGC 60.746 55.000 0.00 0.00 0.00 5.36
2281 4041 1.672030 CGAGTTGCTCATGTGGGCA 60.672 57.895 2.88 2.88 36.62 5.36
2282 4042 1.236616 CGAGTTGCTCATGTGGGCAA 61.237 55.000 15.85 15.85 44.64 4.52
2283 4043 0.524862 GAGTTGCTCATGTGGGCAAG 59.475 55.000 19.81 0.00 46.87 4.01
2284 4044 1.080298 GTTGCTCATGTGGGCAAGC 60.080 57.895 19.81 11.39 46.87 4.01
2285 4045 2.277591 TTGCTCATGTGGGCAAGCC 61.278 57.895 15.85 1.52 42.45 4.35
2286 4046 2.362120 GCTCATGTGGGCAAGCCT 60.362 61.111 11.40 0.00 36.10 4.58
2287 4047 2.413142 GCTCATGTGGGCAAGCCTC 61.413 63.158 11.40 5.56 36.10 4.70
2288 4048 1.001764 CTCATGTGGGCAAGCCTCA 60.002 57.895 11.40 10.92 36.10 3.86
2289 4049 0.609957 CTCATGTGGGCAAGCCTCAA 60.610 55.000 11.40 0.00 36.10 3.02
2290 4050 0.895100 TCATGTGGGCAAGCCTCAAC 60.895 55.000 11.40 7.92 36.10 3.18
2291 4051 1.973281 ATGTGGGCAAGCCTCAACG 60.973 57.895 11.40 0.00 36.10 4.10
2292 4052 3.365265 GTGGGCAAGCCTCAACGG 61.365 66.667 11.40 0.00 36.10 4.44
2293 4053 3.884774 TGGGCAAGCCTCAACGGT 61.885 61.111 11.40 0.00 36.10 4.83
2294 4054 2.349755 GGGCAAGCCTCAACGGTA 59.650 61.111 11.40 0.00 36.10 4.02
2295 4055 1.745489 GGGCAAGCCTCAACGGTAG 60.745 63.158 11.40 0.00 36.10 3.18
2296 4056 1.295423 GGCAAGCCTCAACGGTAGA 59.705 57.895 3.29 0.00 34.25 2.59
2297 4057 0.107654 GGCAAGCCTCAACGGTAGAT 60.108 55.000 3.29 0.00 34.25 1.98
2298 4058 1.679032 GGCAAGCCTCAACGGTAGATT 60.679 52.381 3.29 0.00 34.25 2.40
2299 4059 1.666189 GCAAGCCTCAACGGTAGATTC 59.334 52.381 0.00 0.00 34.25 2.52
2300 4060 1.927174 CAAGCCTCAACGGTAGATTCG 59.073 52.381 0.00 0.00 34.25 3.34
2301 4061 0.179108 AGCCTCAACGGTAGATTCGC 60.179 55.000 0.00 0.00 34.25 4.70
2302 4062 1.152383 GCCTCAACGGTAGATTCGCC 61.152 60.000 0.00 0.00 34.25 5.54
2303 4063 0.174845 CCTCAACGGTAGATTCGCCA 59.825 55.000 0.00 0.00 0.00 5.69
2304 4064 1.278238 CTCAACGGTAGATTCGCCAC 58.722 55.000 0.00 0.00 0.00 5.01
2305 4065 0.892755 TCAACGGTAGATTCGCCACT 59.107 50.000 0.00 0.00 0.00 4.00
2306 4066 0.999406 CAACGGTAGATTCGCCACTG 59.001 55.000 0.00 0.00 0.00 3.66
2320 4080 2.738643 CGCCACTGGTATGAATCGAGTT 60.739 50.000 0.00 0.00 0.00 3.01
2429 4296 5.636965 TGGTTGTGGCGATTTTTATCATTTG 59.363 36.000 0.00 0.00 0.00 2.32
2431 4298 6.183360 GGTTGTGGCGATTTTTATCATTTGTC 60.183 38.462 0.00 0.00 0.00 3.18
2484 4495 3.013921 ACGACCACAAGTTTGTCACAAT 58.986 40.909 0.00 0.00 39.91 2.71
2602 4631 6.654793 CTGAAGTAGCAGTTGGAAATCTAC 57.345 41.667 0.00 0.00 0.00 2.59
2603 4632 6.360370 TGAAGTAGCAGTTGGAAATCTACT 57.640 37.500 0.00 0.00 37.68 2.57
2611 4640 5.502544 GCAGTTGGAAATCTACTATTCGTGC 60.503 44.000 0.00 0.00 30.58 5.34
2725 4768 0.035176 TTGCAGCCCAAGAATTTGCC 59.965 50.000 0.00 0.00 33.98 4.52
2732 4775 0.171903 CCAAGAATTTGCCCTGCGAG 59.828 55.000 0.00 0.00 32.79 5.03
2898 5502 3.376540 GCTAGACTAATTGCTCGAGTGG 58.623 50.000 15.13 0.00 0.00 4.00
2963 5574 7.653713 ACTGAGATTATTAGCCTGATTTACACG 59.346 37.037 0.00 0.00 0.00 4.49
3014 6104 4.090930 ACGTTCATGTTTCTCGTAATTCCG 59.909 41.667 0.00 0.00 33.04 4.30
3061 6154 7.859613 CGATGTCGTGATAAAGATTCTGTAT 57.140 36.000 0.00 0.00 34.11 2.29
3733 7273 1.030488 CAGGAGCCCATGTCTGCTTG 61.030 60.000 3.97 0.00 38.11 4.01
3819 7424 1.875963 GGTGTCTGCAAACATCCCG 59.124 57.895 0.00 0.00 0.00 5.14
3837 7442 3.468326 GATGGCCCCTCTCTTCGGC 62.468 68.421 0.00 0.00 42.23 5.54
3942 7575 1.384525 AGTTCACCTCTCCGATCTCG 58.615 55.000 0.00 0.00 39.44 4.04
3968 7616 3.181493 GCAACTGGAAGAAATCATGCGAT 60.181 43.478 0.00 0.00 37.43 4.58
3970 7618 2.868583 ACTGGAAGAAATCATGCGATCG 59.131 45.455 11.69 11.69 37.43 3.69
3996 7829 3.350912 CATTTTGCGCGTAACTGATACC 58.649 45.455 9.79 0.00 0.00 2.73
4224 8069 2.030562 AACACCCTCGACAAGGCG 59.969 61.111 0.00 0.00 44.71 5.52
4262 8112 4.695231 CGAGTGACCGCCGACGTT 62.695 66.667 0.00 0.00 37.70 3.99
4308 8174 0.318441 TTGGTCTCTGGTTCTCTGCG 59.682 55.000 0.00 0.00 0.00 5.18
4328 8194 8.748380 TCTGCGATTATCACATACTTTATCTG 57.252 34.615 0.00 0.00 0.00 2.90
4386 8276 1.611977 GATGTATGCATGCATGGTGCT 59.388 47.619 37.43 18.01 45.31 4.40
4414 8304 2.833794 TCGTGAGAAAACTGAGTTGGG 58.166 47.619 0.00 0.00 37.03 4.12
4470 8360 1.086634 GGACTGCCTGCTTAGCTTCG 61.087 60.000 5.60 0.00 0.00 3.79
4599 8667 0.462759 GGCGCTGATAACAAGCTCCT 60.463 55.000 7.64 0.00 31.40 3.69
4644 8718 9.383519 CAAACAGACAATCTATGTACCAACTAT 57.616 33.333 0.00 0.00 44.12 2.12
4651 8725 8.758829 ACAATCTATGTACCAACTATCAAGTGA 58.241 33.333 0.00 0.00 41.63 3.41
4657 8731 6.406370 TGTACCAACTATCAAGTGATGAAGG 58.594 40.000 4.00 3.83 42.54 3.46
4658 8732 4.848357 ACCAACTATCAAGTGATGAAGGG 58.152 43.478 4.00 3.81 42.54 3.95
4663 8737 0.955428 TCAAGTGATGAAGGGTGCGC 60.955 55.000 0.00 0.00 34.30 6.09
4665 8739 4.166011 GTGATGAAGGGTGCGCGC 62.166 66.667 27.26 27.26 0.00 6.86
4678 8752 1.029408 TGCGCGCCCATAACTGAAAT 61.029 50.000 30.77 0.00 0.00 2.17
4679 8753 0.317020 GCGCGCCCATAACTGAAATC 60.317 55.000 23.24 0.00 0.00 2.17
4703 8777 4.057428 GCGTGTCCCGAGCACTCT 62.057 66.667 0.00 0.00 39.56 3.24
4717 8791 3.198863 GCACTCTGCAACTGATTTCTG 57.801 47.619 0.00 0.00 44.26 3.02
4725 8799 2.161211 GCAACTGATTTCTGCTCCTGAC 59.839 50.000 0.00 0.00 33.20 3.51
4763 8837 3.330853 CGGTGATTCTAGGCGCGC 61.331 66.667 25.94 25.94 0.00 6.86
4786 8868 4.727507 GTGAGATCACTAGAGCAAGGAA 57.272 45.455 5.72 0.00 43.25 3.36
4788 8870 4.867608 GTGAGATCACTAGAGCAAGGAAAC 59.132 45.833 5.72 0.00 43.25 2.78
4822 8904 2.101233 GGAGAAAGAAGACGCGGCC 61.101 63.158 9.25 0.00 0.00 6.13
5101 9189 0.317479 GCTTACCCAGTCGCCGATAT 59.683 55.000 0.00 0.00 0.00 1.63
5102 9190 1.270147 GCTTACCCAGTCGCCGATATT 60.270 52.381 0.00 0.00 0.00 1.28
5167 9255 2.795329 TCCTCAAAGCAAAGATGTCCC 58.205 47.619 0.00 0.00 0.00 4.46
5232 9320 4.333926 GCTGTATCCAGGTAGCTGAAAAAG 59.666 45.833 23.31 12.44 39.22 2.27
5294 9387 4.645535 TGAATTCTGAAGAGTGGTCAAGG 58.354 43.478 7.05 0.00 0.00 3.61
5324 9417 4.568359 AGACTTTATGTGCAGTTCATAGCG 59.432 41.667 0.00 0.00 0.00 4.26
5332 9429 2.223805 TGCAGTTCATAGCGTCGATGAT 60.224 45.455 9.31 4.29 33.41 2.45
5338 9435 6.033302 CAGTTCATAGCGTCGATGATATCAAG 59.967 42.308 12.34 7.33 33.41 3.02
5367 9464 2.960819 ACTTGTTACTCGAGTGATGCC 58.039 47.619 28.12 8.81 39.15 4.40
5387 9484 3.814283 GCCCATGAATTTGCAAGAAAACA 59.186 39.130 0.00 0.00 0.00 2.83
5407 9504 1.202651 ACACAAAAGGGAGGACACTCG 60.203 52.381 0.00 0.00 44.93 4.18
5439 9541 9.237187 GGATTAGAAGAAAGGAGAGTGAAATTT 57.763 33.333 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.103937 CCTCGCTTGGGAGATCTCAC 59.896 60.000 23.85 21.38 36.08 3.51
1 2 0.324738 ACCTCGCTTGGGAGATCTCA 60.325 55.000 23.85 2.28 36.08 3.27
2 3 0.827368 AACCTCGCTTGGGAGATCTC 59.173 55.000 14.75 14.75 36.08 2.75
3 4 2.160721 TAACCTCGCTTGGGAGATCT 57.839 50.000 14.94 0.00 36.08 2.75
4 5 2.981859 TTAACCTCGCTTGGGAGATC 57.018 50.000 14.94 0.00 36.08 2.75
5 6 3.545703 CATTTAACCTCGCTTGGGAGAT 58.454 45.455 14.94 7.09 36.08 2.75
6 7 2.355716 CCATTTAACCTCGCTTGGGAGA 60.356 50.000 14.94 0.00 36.08 3.71
7 8 2.017049 CCATTTAACCTCGCTTGGGAG 58.983 52.381 7.59 7.59 0.00 4.30
8 9 1.353022 ACCATTTAACCTCGCTTGGGA 59.647 47.619 0.00 0.00 0.00 4.37
9 10 1.834188 ACCATTTAACCTCGCTTGGG 58.166 50.000 0.00 0.00 0.00 4.12
10 11 3.574614 CAAACCATTTAACCTCGCTTGG 58.425 45.455 0.00 0.00 0.00 3.61
11 12 3.574614 CCAAACCATTTAACCTCGCTTG 58.425 45.455 0.00 0.00 0.00 4.01
12 13 2.029380 GCCAAACCATTTAACCTCGCTT 60.029 45.455 0.00 0.00 0.00 4.68
13 14 1.544246 GCCAAACCATTTAACCTCGCT 59.456 47.619 0.00 0.00 0.00 4.93
14 15 1.271102 TGCCAAACCATTTAACCTCGC 59.729 47.619 0.00 0.00 0.00 5.03
15 16 3.005367 AGTTGCCAAACCATTTAACCTCG 59.995 43.478 0.00 0.00 36.94 4.63
16 17 4.600692 AGTTGCCAAACCATTTAACCTC 57.399 40.909 0.00 0.00 36.94 3.85
17 18 6.487299 TTAAGTTGCCAAACCATTTAACCT 57.513 33.333 0.00 0.00 36.94 3.50
18 19 7.873505 TGTATTAAGTTGCCAAACCATTTAACC 59.126 33.333 0.00 0.00 36.94 2.85
19 20 8.819643 TGTATTAAGTTGCCAAACCATTTAAC 57.180 30.769 0.00 0.00 36.94 2.01
21 22 9.429359 CAATGTATTAAGTTGCCAAACCATTTA 57.571 29.630 0.00 0.00 36.94 1.40
22 23 8.153550 TCAATGTATTAAGTTGCCAAACCATTT 58.846 29.630 0.00 0.00 36.94 2.32
23 24 7.675062 TCAATGTATTAAGTTGCCAAACCATT 58.325 30.769 0.00 0.00 36.94 3.16
24 25 7.238486 TCAATGTATTAAGTTGCCAAACCAT 57.762 32.000 0.00 0.00 36.94 3.55
25 26 6.656632 TCAATGTATTAAGTTGCCAAACCA 57.343 33.333 0.00 0.00 36.94 3.67
26 27 7.954788 TTTCAATGTATTAAGTTGCCAAACC 57.045 32.000 0.00 0.00 36.94 3.27
27 28 8.821894 TGTTTTCAATGTATTAAGTTGCCAAAC 58.178 29.630 0.00 0.00 36.47 2.93
28 29 8.948631 TGTTTTCAATGTATTAAGTTGCCAAA 57.051 26.923 0.00 0.00 0.00 3.28
29 30 8.948631 TTGTTTTCAATGTATTAAGTTGCCAA 57.051 26.923 0.00 0.00 34.60 4.52
30 31 8.948631 TTTGTTTTCAATGTATTAAGTTGCCA 57.051 26.923 0.00 0.00 39.70 4.92
40 41 8.547069 CGGTTCAACAATTTGTTTTCAATGTAT 58.453 29.630 12.02 0.00 38.77 2.29
41 42 7.010552 CCGGTTCAACAATTTGTTTTCAATGTA 59.989 33.333 12.02 0.00 38.77 2.29
42 43 6.183360 CCGGTTCAACAATTTGTTTTCAATGT 60.183 34.615 12.02 0.00 38.77 2.71
43 44 6.036517 TCCGGTTCAACAATTTGTTTTCAATG 59.963 34.615 12.02 1.52 38.77 2.82
44 45 6.109359 TCCGGTTCAACAATTTGTTTTCAAT 58.891 32.000 12.02 0.00 38.77 2.57
45 46 5.479306 TCCGGTTCAACAATTTGTTTTCAA 58.521 33.333 12.02 3.52 38.77 2.69
46 47 5.073311 TCCGGTTCAACAATTTGTTTTCA 57.927 34.783 12.02 0.00 38.77 2.69
47 48 6.256757 TCAATCCGGTTCAACAATTTGTTTTC 59.743 34.615 12.02 5.95 38.77 2.29
48 49 6.109359 TCAATCCGGTTCAACAATTTGTTTT 58.891 32.000 12.02 0.00 38.77 2.43
49 50 5.665459 TCAATCCGGTTCAACAATTTGTTT 58.335 33.333 12.02 0.00 38.77 2.83
50 51 5.269505 TCAATCCGGTTCAACAATTTGTT 57.730 34.783 8.97 8.97 42.08 2.83
51 52 4.927978 TCAATCCGGTTCAACAATTTGT 57.072 36.364 0.00 0.00 34.02 2.83
52 53 7.257003 TGATATCAATCCGGTTCAACAATTTG 58.743 34.615 1.98 0.00 0.00 2.32
53 54 7.403312 TGATATCAATCCGGTTCAACAATTT 57.597 32.000 1.98 0.00 0.00 1.82
54 55 7.403312 TTGATATCAATCCGGTTCAACAATT 57.597 32.000 14.23 0.00 0.00 2.32
55 56 7.403312 TTTGATATCAATCCGGTTCAACAAT 57.597 32.000 18.61 0.00 35.55 2.71
56 57 6.127758 CCTTTGATATCAATCCGGTTCAACAA 60.128 38.462 18.61 0.00 35.55 2.83
57 58 5.356751 CCTTTGATATCAATCCGGTTCAACA 59.643 40.000 18.61 0.00 35.55 3.33
58 59 5.588648 TCCTTTGATATCAATCCGGTTCAAC 59.411 40.000 18.61 0.00 35.55 3.18
59 60 5.750524 TCCTTTGATATCAATCCGGTTCAA 58.249 37.500 18.61 0.13 35.55 2.69
60 61 5.366482 TCCTTTGATATCAATCCGGTTCA 57.634 39.130 18.61 0.83 35.55 3.18
61 62 6.693315 TTTCCTTTGATATCAATCCGGTTC 57.307 37.500 18.61 0.00 35.55 3.62
62 63 7.491682 CATTTTCCTTTGATATCAATCCGGTT 58.508 34.615 18.61 0.00 35.55 4.44
63 64 6.461509 GCATTTTCCTTTGATATCAATCCGGT 60.462 38.462 18.61 2.47 35.55 5.28
64 65 5.922544 GCATTTTCCTTTGATATCAATCCGG 59.077 40.000 18.61 17.53 35.55 5.14
65 66 6.506147 TGCATTTTCCTTTGATATCAATCCG 58.494 36.000 18.61 10.18 35.55 4.18
66 67 7.601508 GGATGCATTTTCCTTTGATATCAATCC 59.398 37.037 18.61 13.29 35.55 3.01
67 68 8.365647 AGGATGCATTTTCCTTTGATATCAATC 58.634 33.333 18.61 8.51 40.84 2.67
68 69 8.258850 AGGATGCATTTTCCTTTGATATCAAT 57.741 30.769 18.61 0.00 40.84 2.57
69 70 7.664552 AGGATGCATTTTCCTTTGATATCAA 57.335 32.000 14.23 14.23 40.84 2.57
70 71 7.231317 GGTAGGATGCATTTTCCTTTGATATCA 59.769 37.037 12.49 0.00 40.84 2.15
71 72 7.231317 TGGTAGGATGCATTTTCCTTTGATATC 59.769 37.037 12.49 0.00 40.84 1.63
72 73 7.014615 GTGGTAGGATGCATTTTCCTTTGATAT 59.985 37.037 12.49 0.00 40.84 1.63
73 74 6.321181 GTGGTAGGATGCATTTTCCTTTGATA 59.679 38.462 12.49 0.00 40.84 2.15
74 75 5.127682 GTGGTAGGATGCATTTTCCTTTGAT 59.872 40.000 12.49 0.00 40.84 2.57
75 76 4.462483 GTGGTAGGATGCATTTTCCTTTGA 59.538 41.667 12.49 0.00 40.84 2.69
76 77 4.381932 GGTGGTAGGATGCATTTTCCTTTG 60.382 45.833 12.49 0.00 40.84 2.77
77 78 3.769300 GGTGGTAGGATGCATTTTCCTTT 59.231 43.478 12.49 0.00 40.84 3.11
78 79 3.011708 AGGTGGTAGGATGCATTTTCCTT 59.988 43.478 12.49 0.00 40.84 3.36
79 80 2.582636 AGGTGGTAGGATGCATTTTCCT 59.417 45.455 11.95 11.95 45.59 3.36
80 81 3.018423 AGGTGGTAGGATGCATTTTCC 57.982 47.619 0.00 0.00 0.00 3.13
104 105 4.497291 TGAGACATGTGGGGTAATTACC 57.503 45.455 24.19 24.19 45.71 2.85
105 106 8.594550 AGTATATGAGACATGTGGGGTAATTAC 58.405 37.037 1.15 7.09 0.00 1.89
106 107 8.736097 AGTATATGAGACATGTGGGGTAATTA 57.264 34.615 1.15 0.00 0.00 1.40
107 108 7.633018 AGTATATGAGACATGTGGGGTAATT 57.367 36.000 1.15 0.00 0.00 1.40
108 109 8.917414 ATAGTATATGAGACATGTGGGGTAAT 57.083 34.615 1.15 0.00 0.00 1.89
109 110 7.953493 TGATAGTATATGAGACATGTGGGGTAA 59.047 37.037 1.15 0.00 0.00 2.85
110 111 7.475299 TGATAGTATATGAGACATGTGGGGTA 58.525 38.462 1.15 0.00 0.00 3.69
111 112 6.322931 TGATAGTATATGAGACATGTGGGGT 58.677 40.000 1.15 0.00 0.00 4.95
112 113 6.857437 TGATAGTATATGAGACATGTGGGG 57.143 41.667 1.15 0.00 0.00 4.96
113 114 7.845037 ACATGATAGTATATGAGACATGTGGG 58.155 38.462 1.15 0.00 42.90 4.61
217 218 5.559148 TCATGGGCCAACTTACAATTTTT 57.441 34.783 11.89 0.00 0.00 1.94
218 219 5.760484 ATCATGGGCCAACTTACAATTTT 57.240 34.783 11.89 0.00 0.00 1.82
219 220 5.760484 AATCATGGGCCAACTTACAATTT 57.240 34.783 11.89 0.00 0.00 1.82
220 221 5.760484 AAATCATGGGCCAACTTACAATT 57.240 34.783 11.89 0.00 0.00 2.32
221 222 5.760484 AAAATCATGGGCCAACTTACAAT 57.240 34.783 11.89 0.00 0.00 2.71
222 223 5.559148 AAAAATCATGGGCCAACTTACAA 57.441 34.783 11.89 0.00 0.00 2.41
223 224 6.865834 ATAAAAATCATGGGCCAACTTACA 57.134 33.333 11.89 0.00 0.00 2.41
230 231 9.775854 CACAAATATAATAAAAATCATGGGCCA 57.224 29.630 9.61 9.61 0.00 5.36
231 232 9.995003 TCACAAATATAATAAAAATCATGGGCC 57.005 29.630 0.00 0.00 0.00 5.80
284 285 9.772973 TGGTAGCATATATCGTATTTTCAGTTT 57.227 29.630 0.00 0.00 0.00 2.66
285 286 9.772973 TTGGTAGCATATATCGTATTTTCAGTT 57.227 29.630 0.00 0.00 0.00 3.16
286 287 9.772973 TTTGGTAGCATATATCGTATTTTCAGT 57.227 29.630 0.00 0.00 0.00 3.41
347 348 9.684448 GAGAGTATGTACGTGTAGTATGTAGTA 57.316 37.037 0.00 0.00 37.69 1.82
348 349 7.655328 GGAGAGTATGTACGTGTAGTATGTAGT 59.345 40.741 0.00 0.00 37.69 2.73
349 350 7.148836 CGGAGAGTATGTACGTGTAGTATGTAG 60.149 44.444 0.00 0.00 37.69 2.74
350 351 6.642540 CGGAGAGTATGTACGTGTAGTATGTA 59.357 42.308 0.00 0.00 37.69 2.29
351 352 5.464722 CGGAGAGTATGTACGTGTAGTATGT 59.535 44.000 0.00 0.00 37.69 2.29
352 353 5.693555 TCGGAGAGTATGTACGTGTAGTATG 59.306 44.000 0.00 0.00 37.69 2.39
353 354 5.847304 TCGGAGAGTATGTACGTGTAGTAT 58.153 41.667 0.00 0.00 37.69 2.12
354 355 5.262588 TCGGAGAGTATGTACGTGTAGTA 57.737 43.478 0.00 0.00 0.00 1.82
355 356 4.128925 TCGGAGAGTATGTACGTGTAGT 57.871 45.455 0.00 0.00 0.00 2.73
356 357 5.670149 AATCGGAGAGTATGTACGTGTAG 57.330 43.478 0.00 0.00 43.63 2.74
357 358 5.585844 TCAAATCGGAGAGTATGTACGTGTA 59.414 40.000 0.00 0.00 43.63 2.90
358 359 4.397103 TCAAATCGGAGAGTATGTACGTGT 59.603 41.667 0.00 0.00 43.63 4.49
359 360 4.916870 TCAAATCGGAGAGTATGTACGTG 58.083 43.478 0.00 0.00 43.63 4.49
360 361 5.769484 ATCAAATCGGAGAGTATGTACGT 57.231 39.130 0.00 0.00 43.63 3.57
396 397 8.885722 GTGAATGTAAAATGCATCCAAAATCAT 58.114 29.630 0.00 0.00 0.00 2.45
397 398 7.876582 TGTGAATGTAAAATGCATCCAAAATCA 59.123 29.630 0.00 0.00 0.00 2.57
398 399 8.170553 GTGTGAATGTAAAATGCATCCAAAATC 58.829 33.333 0.00 0.00 0.00 2.17
399 400 7.660617 TGTGTGAATGTAAAATGCATCCAAAAT 59.339 29.630 0.00 0.00 0.00 1.82
400 401 6.988580 TGTGTGAATGTAAAATGCATCCAAAA 59.011 30.769 0.00 0.00 0.00 2.44
401 402 6.519382 TGTGTGAATGTAAAATGCATCCAAA 58.481 32.000 0.00 0.00 0.00 3.28
402 403 6.094193 TGTGTGAATGTAAAATGCATCCAA 57.906 33.333 0.00 0.00 0.00 3.53
403 404 5.718724 TGTGTGAATGTAAAATGCATCCA 57.281 34.783 0.00 0.00 0.00 3.41
404 405 8.136800 TCATATGTGTGAATGTAAAATGCATCC 58.863 33.333 0.00 0.00 0.00 3.51
405 406 9.518906 TTCATATGTGTGAATGTAAAATGCATC 57.481 29.630 0.00 0.00 33.41 3.91
406 407 9.872721 TTTCATATGTGTGAATGTAAAATGCAT 57.127 25.926 1.90 0.00 37.88 3.96
407 408 9.138062 GTTTCATATGTGTGAATGTAAAATGCA 57.862 29.630 1.90 0.00 37.88 3.96
408 409 9.138062 TGTTTCATATGTGTGAATGTAAAATGC 57.862 29.630 1.90 0.00 37.88 3.56
439 440 9.280456 TGGGGCCCTTTAATATAAACATAAAAA 57.720 29.630 25.93 0.00 0.00 1.94
440 441 8.855804 TGGGGCCCTTTAATATAAACATAAAA 57.144 30.769 25.93 0.00 0.00 1.52
441 442 7.511028 CCTGGGGCCCTTTAATATAAACATAAA 59.489 37.037 25.93 0.00 0.00 1.40
442 443 7.013834 CCTGGGGCCCTTTAATATAAACATAA 58.986 38.462 25.93 0.00 0.00 1.90
443 444 6.557568 CCTGGGGCCCTTTAATATAAACATA 58.442 40.000 25.93 0.00 0.00 2.29
444 445 5.402630 CCTGGGGCCCTTTAATATAAACAT 58.597 41.667 25.93 0.00 0.00 2.71
445 446 4.810345 CCTGGGGCCCTTTAATATAAACA 58.190 43.478 25.93 5.16 0.00 2.83
446 447 3.576982 GCCTGGGGCCCTTTAATATAAAC 59.423 47.826 25.93 0.00 44.06 2.01
447 448 3.851979 GCCTGGGGCCCTTTAATATAAA 58.148 45.455 25.93 0.00 44.06 1.40
448 449 3.536075 GCCTGGGGCCCTTTAATATAA 57.464 47.619 25.93 0.00 44.06 0.98
461 462 0.391263 GACGAAACTAGTGCCTGGGG 60.391 60.000 0.00 0.00 0.00 4.96
462 463 0.391263 GGACGAAACTAGTGCCTGGG 60.391 60.000 0.00 0.00 0.00 4.45
463 464 0.391263 GGGACGAAACTAGTGCCTGG 60.391 60.000 0.00 0.00 45.14 4.45
464 465 3.139029 GGGACGAAACTAGTGCCTG 57.861 57.895 0.00 0.00 45.14 4.85
483 484 0.179026 GTCCTAAGATTTCGGGGCCC 60.179 60.000 15.76 15.76 0.00 5.80
484 485 0.179026 GGTCCTAAGATTTCGGGGCC 60.179 60.000 0.00 0.00 36.41 5.80
485 486 0.532196 CGGTCCTAAGATTTCGGGGC 60.532 60.000 0.00 0.00 0.00 5.80
486 487 0.106149 CCGGTCCTAAGATTTCGGGG 59.894 60.000 0.00 0.00 32.71 5.73
487 488 0.106149 CCCGGTCCTAAGATTTCGGG 59.894 60.000 0.00 4.17 42.44 5.14
488 489 0.532196 GCCCGGTCCTAAGATTTCGG 60.532 60.000 0.00 0.00 34.68 4.30
489 490 0.532196 GGCCCGGTCCTAAGATTTCG 60.532 60.000 0.00 0.00 0.00 3.46
490 491 0.179026 GGGCCCGGTCCTAAGATTTC 60.179 60.000 5.69 0.00 0.00 2.17
491 492 1.920532 GGGCCCGGTCCTAAGATTT 59.079 57.895 5.69 0.00 0.00 2.17
492 493 2.440817 CGGGCCCGGTCCTAAGATT 61.441 63.158 37.42 0.00 35.56 2.40
493 494 2.842936 CGGGCCCGGTCCTAAGAT 60.843 66.667 37.42 0.00 35.56 2.40
510 511 4.404654 CAGGAAAAGGCGCCGTGC 62.405 66.667 23.20 15.91 45.38 5.34
511 512 2.978010 ACAGGAAAAGGCGCCGTG 60.978 61.111 23.20 14.78 0.00 4.94
512 513 2.978010 CACAGGAAAAGGCGCCGT 60.978 61.111 23.20 16.90 0.00 5.68
513 514 4.404654 GCACAGGAAAAGGCGCCG 62.405 66.667 23.20 7.32 0.00 6.46
514 515 1.241315 TTAGCACAGGAAAAGGCGCC 61.241 55.000 21.89 21.89 0.00 6.53
515 516 0.169009 CTTAGCACAGGAAAAGGCGC 59.831 55.000 0.00 0.00 0.00 6.53
516 517 0.804989 CCTTAGCACAGGAAAAGGCG 59.195 55.000 0.00 0.00 35.71 5.52
517 518 2.200373 TCCTTAGCACAGGAAAAGGC 57.800 50.000 1.38 0.00 40.26 4.35
523 524 4.787551 TGTTCTTTTTCCTTAGCACAGGA 58.212 39.130 0.00 0.00 41.60 3.86
524 525 5.712152 ATGTTCTTTTTCCTTAGCACAGG 57.288 39.130 0.00 0.00 34.86 4.00
525 526 6.738114 TCAATGTTCTTTTTCCTTAGCACAG 58.262 36.000 0.00 0.00 0.00 3.66
526 527 6.707440 TCAATGTTCTTTTTCCTTAGCACA 57.293 33.333 0.00 0.00 0.00 4.57
527 528 8.593492 AATTCAATGTTCTTTTTCCTTAGCAC 57.407 30.769 0.00 0.00 0.00 4.40
528 529 9.044150 CAAATTCAATGTTCTTTTTCCTTAGCA 57.956 29.630 0.00 0.00 0.00 3.49
529 530 9.045223 ACAAATTCAATGTTCTTTTTCCTTAGC 57.955 29.630 0.00 0.00 0.00 3.09
533 534 8.892723 GGAAACAAATTCAATGTTCTTTTTCCT 58.107 29.630 0.00 0.00 39.98 3.36
534 535 8.128582 GGGAAACAAATTCAATGTTCTTTTTCC 58.871 33.333 0.00 0.00 39.98 3.13
535 536 8.672815 TGGGAAACAAATTCAATGTTCTTTTTC 58.327 29.630 0.00 0.00 39.98 2.29
536 537 8.458052 GTGGGAAACAAATTCAATGTTCTTTTT 58.542 29.630 0.00 0.00 39.98 1.94
537 538 7.201600 CGTGGGAAACAAATTCAATGTTCTTTT 60.202 33.333 0.00 0.00 39.98 2.27
538 539 6.257630 CGTGGGAAACAAATTCAATGTTCTTT 59.742 34.615 0.00 0.00 39.98 2.52
539 540 5.752955 CGTGGGAAACAAATTCAATGTTCTT 59.247 36.000 0.00 0.00 39.98 2.52
540 541 5.288804 CGTGGGAAACAAATTCAATGTTCT 58.711 37.500 0.00 0.00 39.98 3.01
541 542 4.084589 GCGTGGGAAACAAATTCAATGTTC 60.085 41.667 0.00 0.00 39.98 3.18
542 543 3.807071 GCGTGGGAAACAAATTCAATGTT 59.193 39.130 0.00 0.00 42.56 2.71
543 544 3.389221 GCGTGGGAAACAAATTCAATGT 58.611 40.909 0.00 0.00 39.98 2.71
544 545 2.408032 CGCGTGGGAAACAAATTCAATG 59.592 45.455 0.00 0.00 39.98 2.82
545 546 2.035321 ACGCGTGGGAAACAAATTCAAT 59.965 40.909 12.93 0.00 39.98 2.57
546 547 1.405821 ACGCGTGGGAAACAAATTCAA 59.594 42.857 12.93 0.00 39.98 2.69
547 548 1.025812 ACGCGTGGGAAACAAATTCA 58.974 45.000 12.93 0.00 39.98 2.57
548 549 2.973419 TACGCGTGGGAAACAAATTC 57.027 45.000 24.59 0.00 37.31 2.17
549 550 3.078837 AGATACGCGTGGGAAACAAATT 58.921 40.909 24.59 0.00 0.00 1.82
550 551 2.706890 AGATACGCGTGGGAAACAAAT 58.293 42.857 24.59 3.01 0.00 2.32
551 552 2.172851 AGATACGCGTGGGAAACAAA 57.827 45.000 24.59 0.00 0.00 2.83
552 553 2.172851 AAGATACGCGTGGGAAACAA 57.827 45.000 24.59 0.00 0.00 2.83
553 554 2.172851 AAAGATACGCGTGGGAAACA 57.827 45.000 24.59 0.00 0.00 2.83
554 555 3.231160 CAAAAAGATACGCGTGGGAAAC 58.769 45.455 24.59 0.00 0.00 2.78
555 556 2.879646 ACAAAAAGATACGCGTGGGAAA 59.120 40.909 24.59 0.13 0.00 3.13
556 557 2.496111 ACAAAAAGATACGCGTGGGAA 58.504 42.857 24.59 0.62 0.00 3.97
557 558 2.172851 ACAAAAAGATACGCGTGGGA 57.827 45.000 24.59 1.10 0.00 4.37
558 559 2.031508 ACAACAAAAAGATACGCGTGGG 60.032 45.455 24.59 4.46 0.00 4.61
559 560 3.262135 ACAACAAAAAGATACGCGTGG 57.738 42.857 24.59 3.37 0.00 4.94
560 561 4.032355 ACAACAACAAAAAGATACGCGTG 58.968 39.130 24.59 4.54 0.00 5.34
561 562 4.281525 ACAACAACAAAAAGATACGCGT 57.718 36.364 19.17 19.17 0.00 6.01
562 563 4.731000 TCAACAACAACAAAAAGATACGCG 59.269 37.500 3.53 3.53 0.00 6.01
563 564 5.968848 TCTCAACAACAACAAAAAGATACGC 59.031 36.000 0.00 0.00 0.00 4.42
564 565 7.696453 AGTTCTCAACAACAACAAAAAGATACG 59.304 33.333 0.00 0.00 0.00 3.06
565 566 8.911247 AGTTCTCAACAACAACAAAAAGATAC 57.089 30.769 0.00 0.00 0.00 2.24
566 567 9.921637 AAAGTTCTCAACAACAACAAAAAGATA 57.078 25.926 0.00 0.00 0.00 1.98
567 568 8.831715 AAAGTTCTCAACAACAACAAAAAGAT 57.168 26.923 0.00 0.00 0.00 2.40
568 569 9.921637 ATAAAGTTCTCAACAACAACAAAAAGA 57.078 25.926 0.00 0.00 0.00 2.52
569 570 9.956797 CATAAAGTTCTCAACAACAACAAAAAG 57.043 29.630 0.00 0.00 0.00 2.27
570 571 9.698309 TCATAAAGTTCTCAACAACAACAAAAA 57.302 25.926 0.00 0.00 0.00 1.94
571 572 9.134734 GTCATAAAGTTCTCAACAACAACAAAA 57.865 29.630 0.00 0.00 0.00 2.44
572 573 8.519526 AGTCATAAAGTTCTCAACAACAACAAA 58.480 29.630 0.00 0.00 0.00 2.83
573 574 8.050778 AGTCATAAAGTTCTCAACAACAACAA 57.949 30.769 0.00 0.00 0.00 2.83
574 575 7.624360 AGTCATAAAGTTCTCAACAACAACA 57.376 32.000 0.00 0.00 0.00 3.33
575 576 8.181573 TCAAGTCATAAAGTTCTCAACAACAAC 58.818 33.333 0.00 0.00 0.00 3.32
576 577 8.275015 TCAAGTCATAAAGTTCTCAACAACAA 57.725 30.769 0.00 0.00 0.00 2.83
577 578 7.857734 TCAAGTCATAAAGTTCTCAACAACA 57.142 32.000 0.00 0.00 0.00 3.33
580 581 9.725019 ACATATCAAGTCATAAAGTTCTCAACA 57.275 29.630 0.00 0.00 0.00 3.33
582 583 9.942850 TGACATATCAAGTCATAAAGTTCTCAA 57.057 29.630 0.00 0.00 40.80 3.02
583 584 9.591792 CTGACATATCAAGTCATAAAGTTCTCA 57.408 33.333 0.00 0.00 44.27 3.27
584 585 9.809096 TCTGACATATCAAGTCATAAAGTTCTC 57.191 33.333 0.00 0.00 44.27 2.87
593 594 8.805175 CCTCTATCTTCTGACATATCAAGTCAT 58.195 37.037 0.00 0.00 44.27 3.06
594 595 8.001292 TCCTCTATCTTCTGACATATCAAGTCA 58.999 37.037 0.00 0.00 43.23 3.41
595 596 8.402798 TCCTCTATCTTCTGACATATCAAGTC 57.597 38.462 0.00 0.00 33.30 3.01
596 597 8.954834 ATCCTCTATCTTCTGACATATCAAGT 57.045 34.615 0.00 0.00 33.30 3.16
597 598 9.642327 CAATCCTCTATCTTCTGACATATCAAG 57.358 37.037 0.00 0.00 33.30 3.02
598 599 8.093307 GCAATCCTCTATCTTCTGACATATCAA 58.907 37.037 0.00 0.00 33.30 2.57
599 600 7.234166 TGCAATCCTCTATCTTCTGACATATCA 59.766 37.037 0.00 0.00 0.00 2.15
600 601 7.609960 TGCAATCCTCTATCTTCTGACATATC 58.390 38.462 0.00 0.00 0.00 1.63
601 602 7.550597 TGCAATCCTCTATCTTCTGACATAT 57.449 36.000 0.00 0.00 0.00 1.78
602 603 6.983906 TGCAATCCTCTATCTTCTGACATA 57.016 37.500 0.00 0.00 0.00 2.29
603 604 5.883685 TGCAATCCTCTATCTTCTGACAT 57.116 39.130 0.00 0.00 0.00 3.06
604 605 5.423290 TCTTGCAATCCTCTATCTTCTGACA 59.577 40.000 0.00 0.00 0.00 3.58
605 606 5.911752 TCTTGCAATCCTCTATCTTCTGAC 58.088 41.667 0.00 0.00 0.00 3.51
606 607 6.516360 CGATCTTGCAATCCTCTATCTTCTGA 60.516 42.308 0.00 0.00 0.00 3.27
607 608 5.634439 CGATCTTGCAATCCTCTATCTTCTG 59.366 44.000 0.00 0.00 0.00 3.02
608 609 5.304101 ACGATCTTGCAATCCTCTATCTTCT 59.696 40.000 0.00 0.00 0.00 2.85
609 610 5.537188 ACGATCTTGCAATCCTCTATCTTC 58.463 41.667 0.00 0.00 0.00 2.87
610 611 5.304101 AGACGATCTTGCAATCCTCTATCTT 59.696 40.000 0.00 0.00 0.00 2.40
611 612 4.832266 AGACGATCTTGCAATCCTCTATCT 59.168 41.667 0.00 1.09 0.00 1.98
612 613 5.132897 AGACGATCTTGCAATCCTCTATC 57.867 43.478 0.00 0.00 0.00 2.08
613 614 5.536538 TGTAGACGATCTTGCAATCCTCTAT 59.463 40.000 0.00 0.00 30.88 1.98
614 615 4.887655 TGTAGACGATCTTGCAATCCTCTA 59.112 41.667 0.00 2.38 0.00 2.43
615 616 3.701542 TGTAGACGATCTTGCAATCCTCT 59.298 43.478 0.00 3.36 0.00 3.69
616 617 4.046938 TGTAGACGATCTTGCAATCCTC 57.953 45.455 0.00 0.00 0.00 3.71
617 618 4.437239 CTTGTAGACGATCTTGCAATCCT 58.563 43.478 0.00 0.00 0.00 3.24
618 619 3.001736 GCTTGTAGACGATCTTGCAATCC 59.998 47.826 0.00 0.00 0.00 3.01
619 620 3.618594 TGCTTGTAGACGATCTTGCAATC 59.381 43.478 0.00 0.00 0.00 2.67
620 621 3.599343 TGCTTGTAGACGATCTTGCAAT 58.401 40.909 0.00 0.00 0.00 3.56
621 622 3.038788 TGCTTGTAGACGATCTTGCAA 57.961 42.857 0.00 0.00 0.00 4.08
622 623 2.741759 TGCTTGTAGACGATCTTGCA 57.258 45.000 0.00 0.00 0.00 4.08
623 624 6.382608 TCTATATGCTTGTAGACGATCTTGC 58.617 40.000 2.44 0.00 0.00 4.01
624 625 8.239998 TCATCTATATGCTTGTAGACGATCTTG 58.760 37.037 8.02 3.16 29.54 3.02
625 626 8.341892 TCATCTATATGCTTGTAGACGATCTT 57.658 34.615 8.02 0.00 29.54 2.40
626 627 7.929941 TCATCTATATGCTTGTAGACGATCT 57.070 36.000 8.02 0.00 29.54 2.75
627 628 8.972262 TTTCATCTATATGCTTGTAGACGATC 57.028 34.615 8.02 0.00 29.54 3.69
637 638 9.512588 CCCTGACTTTATTTCATCTATATGCTT 57.487 33.333 0.00 0.00 32.76 3.91
638 639 8.884323 TCCCTGACTTTATTTCATCTATATGCT 58.116 33.333 0.00 0.00 32.76 3.79
639 640 9.678260 ATCCCTGACTTTATTTCATCTATATGC 57.322 33.333 0.00 0.00 32.76 3.14
642 643 9.392506 TCCATCCCTGACTTTATTTCATCTATA 57.607 33.333 0.00 0.00 0.00 1.31
643 644 8.280258 TCCATCCCTGACTTTATTTCATCTAT 57.720 34.615 0.00 0.00 0.00 1.98
644 645 7.690454 TCCATCCCTGACTTTATTTCATCTA 57.310 36.000 0.00 0.00 0.00 1.98
645 646 6.581388 TCCATCCCTGACTTTATTTCATCT 57.419 37.500 0.00 0.00 0.00 2.90
646 647 7.503566 TGAATCCATCCCTGACTTTATTTCATC 59.496 37.037 0.00 0.00 0.00 2.92
647 648 7.356680 TGAATCCATCCCTGACTTTATTTCAT 58.643 34.615 0.00 0.00 0.00 2.57
648 649 6.730447 TGAATCCATCCCTGACTTTATTTCA 58.270 36.000 0.00 0.00 0.00 2.69
649 650 7.830099 ATGAATCCATCCCTGACTTTATTTC 57.170 36.000 0.00 0.00 0.00 2.17
650 651 7.830099 GATGAATCCATCCCTGACTTTATTT 57.170 36.000 0.00 0.00 42.55 1.40
667 668 3.770666 TCGTCGTCTTTCTGGATGAATC 58.229 45.455 0.00 0.00 33.70 2.52
668 669 3.868757 TCGTCGTCTTTCTGGATGAAT 57.131 42.857 0.00 0.00 33.70 2.57
669 670 3.444034 AGATCGTCGTCTTTCTGGATGAA 59.556 43.478 0.00 0.00 33.70 2.57
670 671 3.017442 AGATCGTCGTCTTTCTGGATGA 58.983 45.455 0.00 0.00 0.00 2.92
671 672 3.428746 AGATCGTCGTCTTTCTGGATG 57.571 47.619 0.00 0.00 0.00 3.51
672 673 4.452825 TCTAGATCGTCGTCTTTCTGGAT 58.547 43.478 0.00 0.00 0.00 3.41
673 674 3.870274 TCTAGATCGTCGTCTTTCTGGA 58.130 45.455 0.00 2.33 0.00 3.86
674 675 3.002862 CCTCTAGATCGTCGTCTTTCTGG 59.997 52.174 0.00 0.37 0.00 3.86
675 676 3.623960 ACCTCTAGATCGTCGTCTTTCTG 59.376 47.826 0.00 0.00 0.00 3.02
676 677 3.876341 ACCTCTAGATCGTCGTCTTTCT 58.124 45.455 0.00 0.48 0.00 2.52
677 678 5.731599 TTACCTCTAGATCGTCGTCTTTC 57.268 43.478 0.00 0.00 0.00 2.62
678 679 5.447010 CGTTTACCTCTAGATCGTCGTCTTT 60.447 44.000 0.00 0.00 0.00 2.52
679 680 4.033817 CGTTTACCTCTAGATCGTCGTCTT 59.966 45.833 0.00 0.00 0.00 3.01
680 681 3.555139 CGTTTACCTCTAGATCGTCGTCT 59.445 47.826 0.00 0.00 0.00 4.18
681 682 3.844226 GCGTTTACCTCTAGATCGTCGTC 60.844 52.174 0.00 0.00 0.00 4.20
682 683 2.031437 GCGTTTACCTCTAGATCGTCGT 59.969 50.000 0.00 0.00 0.00 4.34
683 684 2.637595 GCGTTTACCTCTAGATCGTCG 58.362 52.381 0.00 0.00 0.00 5.12
684 685 2.637595 CGCGTTTACCTCTAGATCGTC 58.362 52.381 0.00 0.00 0.00 4.20
685 686 1.268437 GCGCGTTTACCTCTAGATCGT 60.268 52.381 8.43 0.00 0.00 3.73
686 687 1.268386 TGCGCGTTTACCTCTAGATCG 60.268 52.381 8.43 0.00 0.00 3.69
687 688 2.486951 TGCGCGTTTACCTCTAGATC 57.513 50.000 8.43 0.00 0.00 2.75
688 689 2.623889 AGATGCGCGTTTACCTCTAGAT 59.376 45.455 8.43 0.00 0.00 1.98
689 690 2.022195 AGATGCGCGTTTACCTCTAGA 58.978 47.619 8.43 0.00 0.00 2.43
690 691 2.493713 AGATGCGCGTTTACCTCTAG 57.506 50.000 8.43 0.00 0.00 2.43
691 692 2.927477 CAAAGATGCGCGTTTACCTCTA 59.073 45.455 8.43 0.00 0.00 2.43
692 693 1.732259 CAAAGATGCGCGTTTACCTCT 59.268 47.619 8.43 0.00 0.00 3.69
693 694 1.463444 ACAAAGATGCGCGTTTACCTC 59.537 47.619 8.43 0.00 0.00 3.85
694 695 1.519408 ACAAAGATGCGCGTTTACCT 58.481 45.000 8.43 0.00 0.00 3.08
695 696 2.325509 AACAAAGATGCGCGTTTACC 57.674 45.000 8.43 0.00 0.00 2.85
696 697 2.334454 CGAAACAAAGATGCGCGTTTAC 59.666 45.455 8.43 0.00 31.98 2.01
697 698 2.032722 ACGAAACAAAGATGCGCGTTTA 60.033 40.909 8.43 0.00 31.98 2.01
698 699 1.268335 ACGAAACAAAGATGCGCGTTT 60.268 42.857 8.43 6.01 34.41 3.60
699 700 0.306533 ACGAAACAAAGATGCGCGTT 59.693 45.000 8.43 0.00 30.16 4.84
700 701 0.306533 AACGAAACAAAGATGCGCGT 59.693 45.000 8.43 0.00 33.99 6.01
701 702 1.394697 AAACGAAACAAAGATGCGCG 58.605 45.000 0.00 0.00 0.00 6.86
702 703 2.786578 TGAAAACGAAACAAAGATGCGC 59.213 40.909 0.00 0.00 0.00 6.09
703 704 4.088496 GGATGAAAACGAAACAAAGATGCG 59.912 41.667 0.00 0.00 0.00 4.73
704 705 5.222631 AGGATGAAAACGAAACAAAGATGC 58.777 37.500 0.00 0.00 0.00 3.91
711 712 4.456535 TCTCCAAGGATGAAAACGAAACA 58.543 39.130 0.00 0.00 0.00 2.83
728 729 0.541998 TCACGCTTCTTCCCTCTCCA 60.542 55.000 0.00 0.00 0.00 3.86
748 750 0.329261 CAGGGCCTCTGGTGATTTCA 59.671 55.000 0.95 0.00 39.76 2.69
749 751 3.181526 CAGGGCCTCTGGTGATTTC 57.818 57.895 0.95 0.00 39.76 2.17
758 760 0.610232 GCATTGTTCACAGGGCCTCT 60.610 55.000 0.95 0.00 0.00 3.69
759 761 0.895100 TGCATTGTTCACAGGGCCTC 60.895 55.000 0.95 0.00 0.00 4.70
761 763 1.290009 GTGCATTGTTCACAGGGCC 59.710 57.895 0.00 0.00 34.73 5.80
762 764 0.388659 TTGTGCATTGTTCACAGGGC 59.611 50.000 0.00 0.00 44.18 5.19
763 765 1.682854 ACTTGTGCATTGTTCACAGGG 59.317 47.619 9.44 4.24 44.18 4.45
764 766 2.099592 ACACTTGTGCATTGTTCACAGG 59.900 45.455 0.10 4.12 44.18 4.00
765 767 3.065786 AGACACTTGTGCATTGTTCACAG 59.934 43.478 0.10 0.00 44.18 3.66
766 768 3.016031 AGACACTTGTGCATTGTTCACA 58.984 40.909 0.10 0.00 42.10 3.58
767 769 3.365832 CAGACACTTGTGCATTGTTCAC 58.634 45.455 0.10 0.00 35.14 3.18
768 770 2.358582 CCAGACACTTGTGCATTGTTCA 59.641 45.455 0.10 0.00 0.00 3.18
769 771 2.358898 ACCAGACACTTGTGCATTGTTC 59.641 45.455 0.10 0.00 0.00 3.18
813 815 3.761140 TGCGTGCGGACCGGAATA 61.761 61.111 17.22 0.00 0.00 1.75
845 851 0.669619 TGTGAACGCTCTTCACCGTA 59.330 50.000 17.07 1.74 46.01 4.02
850 856 0.531974 GTGGGTGTGAACGCTCTTCA 60.532 55.000 0.00 0.00 0.00 3.02
851 857 1.557443 CGTGGGTGTGAACGCTCTTC 61.557 60.000 0.00 0.00 32.40 2.87
873 879 3.681835 ACTCGTGGCTCGTCACCC 61.682 66.667 8.94 0.00 40.80 4.61
874 880 2.430921 CACTCGTGGCTCGTCACC 60.431 66.667 8.94 0.00 40.80 4.02
938 950 2.265739 GTCTCGATGTGCCTGCCA 59.734 61.111 0.00 0.00 0.00 4.92
940 952 0.528684 GTAGGTCTCGATGTGCCTGC 60.529 60.000 7.26 3.29 32.90 4.85
996 1012 1.298157 CGTTCGATGGCAAGCAGGAA 61.298 55.000 0.00 0.00 0.00 3.36
997 1013 1.741401 CGTTCGATGGCAAGCAGGA 60.741 57.895 0.00 0.00 0.00 3.86
1030 1046 2.430332 TCCTTTTGCCTTTTCTGTGTGG 59.570 45.455 0.00 0.00 0.00 4.17
1035 1051 6.493449 TTTTGTTTCCTTTTGCCTTTTCTG 57.507 33.333 0.00 0.00 0.00 3.02
1111 1133 2.350895 CGTGGGTGCCATCCTGAA 59.649 61.111 0.00 0.00 35.28 3.02
1243 1284 2.503382 GGGAGATGGAGAGCGGGTC 61.503 68.421 0.00 0.00 0.00 4.46
1558 2259 2.554806 TAACCATCGTCAGCTACACG 57.445 50.000 10.46 10.46 38.67 4.49
1611 2315 5.450688 GGCTGCTCTAAGAAGAAATCTCGTA 60.451 44.000 0.00 0.00 37.42 3.43
1647 2351 0.406750 TCGTAGGGAGGTCACCTTCA 59.593 55.000 3.89 0.00 39.54 3.02
1652 2356 3.869832 GCTAAAAATCGTAGGGAGGTCAC 59.130 47.826 0.00 0.00 0.00 3.67
1663 2367 5.119588 TCAAGACGAAATCGCTAAAAATCGT 59.880 36.000 2.15 0.00 45.10 3.73
1671 2375 4.807304 GGGTTATTCAAGACGAAATCGCTA 59.193 41.667 2.15 0.00 44.43 4.26
1694 2398 5.363939 GAGGTCACCTTCAGAATATTGGAG 58.636 45.833 0.00 0.00 31.76 3.86
1695 2399 4.164221 GGAGGTCACCTTCAGAATATTGGA 59.836 45.833 0.00 0.00 31.76 3.53
1696 2400 4.455606 GGAGGTCACCTTCAGAATATTGG 58.544 47.826 0.00 0.00 31.76 3.16
1698 2402 4.375313 AGGGAGGTCACCTTCAGAATATT 58.625 43.478 3.89 0.00 33.64 1.28
1702 2406 2.158219 TGTAGGGAGGTCACCTTCAGAA 60.158 50.000 3.89 0.00 39.54 3.02
1703 2407 1.431633 TGTAGGGAGGTCACCTTCAGA 59.568 52.381 3.89 0.00 39.54 3.27
1704 2408 1.938585 TGTAGGGAGGTCACCTTCAG 58.061 55.000 3.89 0.00 39.54 3.02
1705 2409 2.409064 TTGTAGGGAGGTCACCTTCA 57.591 50.000 3.89 0.00 39.54 3.02
1706 2410 4.302559 AAATTGTAGGGAGGTCACCTTC 57.697 45.455 0.00 0.00 39.54 3.46
1707 2411 4.741928 AAAATTGTAGGGAGGTCACCTT 57.258 40.909 0.00 0.00 39.54 3.50
1708 2412 4.741928 AAAAATTGTAGGGAGGTCACCT 57.258 40.909 0.00 0.00 42.15 4.00
1709 2413 4.398358 GCTAAAAATTGTAGGGAGGTCACC 59.602 45.833 0.00 0.00 0.00 4.02
1713 2417 4.563140 TCGCTAAAAATTGTAGGGAGGT 57.437 40.909 5.92 0.00 36.08 3.85
1715 2419 6.183360 ACGAAATCGCTAAAAATTGTAGGGAG 60.183 38.462 14.07 4.91 41.95 4.30
1716 2420 5.644636 ACGAAATCGCTAAAAATTGTAGGGA 59.355 36.000 11.61 11.61 42.58 4.20
1718 2422 6.772078 AGACGAAATCGCTAAAAATTGTAGG 58.228 36.000 2.15 0.00 44.43 3.18
1720 2424 7.798801 TCAAGACGAAATCGCTAAAAATTGTA 58.201 30.769 2.15 0.00 44.43 2.41
1722 2426 7.547285 TTCAAGACGAAATCGCTAAAAATTG 57.453 32.000 2.15 0.00 44.43 2.32
1723 2427 9.834628 TTATTCAAGACGAAATCGCTAAAAATT 57.165 25.926 2.15 0.00 44.43 1.82
1724 2428 9.274065 GTTATTCAAGACGAAATCGCTAAAAAT 57.726 29.630 2.15 1.51 44.43 1.82
1725 2429 7.747357 GGTTATTCAAGACGAAATCGCTAAAAA 59.253 33.333 2.15 0.00 44.43 1.94
1726 2430 7.238571 GGTTATTCAAGACGAAATCGCTAAAA 58.761 34.615 2.15 1.13 44.43 1.52
1727 2431 6.183360 GGGTTATTCAAGACGAAATCGCTAAA 60.183 38.462 2.15 1.43 44.43 1.85
1728 2432 5.292589 GGGTTATTCAAGACGAAATCGCTAA 59.707 40.000 2.15 0.00 44.43 3.09
1729 2433 4.807304 GGGTTATTCAAGACGAAATCGCTA 59.193 41.667 2.15 0.00 44.43 4.26
1730 2434 3.621715 GGGTTATTCAAGACGAAATCGCT 59.378 43.478 2.15 0.00 44.43 4.93
1732 2436 4.270325 GGAGGGTTATTCAAGACGAAATCG 59.730 45.833 0.48 0.48 46.33 3.34
1734 2438 5.174037 TGGAGGGTTATTCAAGACGAAAT 57.826 39.130 0.00 0.00 37.12 2.17
1735 2439 4.627284 TGGAGGGTTATTCAAGACGAAA 57.373 40.909 0.00 0.00 37.12 3.46
1736 2440 4.627284 TTGGAGGGTTATTCAAGACGAA 57.373 40.909 0.00 0.00 38.22 3.85
1738 2442 6.992715 AGAATATTGGAGGGTTATTCAAGACG 59.007 38.462 0.00 0.00 35.66 4.18
1739 2443 7.993183 TCAGAATATTGGAGGGTTATTCAAGAC 59.007 37.037 0.00 0.00 35.66 3.01
1740 2444 8.101309 TCAGAATATTGGAGGGTTATTCAAGA 57.899 34.615 0.00 0.00 35.66 3.02
1741 2445 8.752005 TTCAGAATATTGGAGGGTTATTCAAG 57.248 34.615 0.00 0.00 35.66 3.02
1743 2447 7.091993 ACCTTCAGAATATTGGAGGGTTATTCA 60.092 37.037 12.31 0.00 46.54 2.57
1745 2449 7.062957 CACCTTCAGAATATTGGAGGGTTATT 58.937 38.462 14.43 0.00 46.54 1.40
1746 2450 6.410853 CCACCTTCAGAATATTGGAGGGTTAT 60.411 42.308 14.43 0.00 46.54 1.89
1822 3028 1.066929 TGCGAGATAAAGCAGCTGTGA 60.067 47.619 16.64 0.00 38.59 3.58
1892 3106 8.717821 CACCGTCATAAATCTAGAGAAACAAAA 58.282 33.333 0.00 0.00 0.00 2.44
2057 3744 6.016276 GGTTGTACTGGAAACATGACAATTCT 60.016 38.462 0.00 0.00 42.92 2.40
2199 3899 2.866156 CACACACACAAGTACTCCTGTG 59.134 50.000 21.05 21.05 39.96 3.66
2238 3998 8.487970 CGATTCATAGTTTCATACCACACATAC 58.512 37.037 0.00 0.00 0.00 2.39
2240 4000 7.272244 TCGATTCATAGTTTCATACCACACAT 58.728 34.615 0.00 0.00 0.00 3.21
2245 4005 6.257849 GCAACTCGATTCATAGTTTCATACCA 59.742 38.462 0.00 0.00 33.72 3.25
2246 4006 6.480320 AGCAACTCGATTCATAGTTTCATACC 59.520 38.462 0.00 0.00 33.72 2.73
2247 4007 7.222805 TGAGCAACTCGATTCATAGTTTCATAC 59.777 37.037 0.00 0.00 33.72 2.39
2248 4008 7.264947 TGAGCAACTCGATTCATAGTTTCATA 58.735 34.615 0.00 0.00 33.72 2.15
2249 4009 6.108687 TGAGCAACTCGATTCATAGTTTCAT 58.891 36.000 0.00 0.00 33.72 2.57
2250 4010 5.478407 TGAGCAACTCGATTCATAGTTTCA 58.522 37.500 0.00 1.00 33.72 2.69
2251 4011 6.036517 ACATGAGCAACTCGATTCATAGTTTC 59.963 38.462 0.00 0.00 33.72 2.78
2252 4012 5.877012 ACATGAGCAACTCGATTCATAGTTT 59.123 36.000 0.00 0.00 33.72 2.66
2253 4013 5.292834 CACATGAGCAACTCGATTCATAGTT 59.707 40.000 0.00 0.00 36.38 2.24
2254 4014 4.807834 CACATGAGCAACTCGATTCATAGT 59.192 41.667 0.00 0.00 32.35 2.12
2255 4015 4.210746 CCACATGAGCAACTCGATTCATAG 59.789 45.833 0.00 0.00 32.35 2.23
2256 4016 4.122046 CCACATGAGCAACTCGATTCATA 58.878 43.478 0.00 0.00 32.35 2.15
2257 4017 2.941064 CCACATGAGCAACTCGATTCAT 59.059 45.455 0.00 0.00 32.35 2.57
2258 4018 2.349590 CCACATGAGCAACTCGATTCA 58.650 47.619 0.00 0.00 32.35 2.57
2259 4019 1.667724 CCCACATGAGCAACTCGATTC 59.332 52.381 0.00 0.00 32.35 2.52
2260 4020 1.742761 CCCACATGAGCAACTCGATT 58.257 50.000 0.00 0.00 32.35 3.34
2261 4021 0.745845 GCCCACATGAGCAACTCGAT 60.746 55.000 0.00 0.00 32.35 3.59
2262 4022 1.375908 GCCCACATGAGCAACTCGA 60.376 57.895 0.00 0.00 32.35 4.04
2263 4023 1.236616 TTGCCCACATGAGCAACTCG 61.237 55.000 15.25 0.00 43.74 4.18
2264 4024 0.524862 CTTGCCCACATGAGCAACTC 59.475 55.000 15.25 0.00 43.74 3.01
2265 4025 1.530013 GCTTGCCCACATGAGCAACT 61.530 55.000 15.25 0.00 43.74 3.16
2266 4026 1.080298 GCTTGCCCACATGAGCAAC 60.080 57.895 15.25 10.45 43.74 4.17
2267 4027 2.277591 GGCTTGCCCACATGAGCAA 61.278 57.895 17.26 17.26 46.26 3.91
2268 4028 2.677524 GGCTTGCCCACATGAGCA 60.678 61.111 0.00 2.34 36.87 4.26
2269 4029 2.362120 AGGCTTGCCCACATGAGC 60.362 61.111 8.17 0.00 35.39 4.26
2270 4030 0.609957 TTGAGGCTTGCCCACATGAG 60.610 55.000 8.17 0.00 34.01 2.90
2271 4031 0.895100 GTTGAGGCTTGCCCACATGA 60.895 55.000 8.17 0.00 34.01 3.07
2272 4032 1.588082 GTTGAGGCTTGCCCACATG 59.412 57.895 8.17 0.00 34.01 3.21
2273 4033 1.973281 CGTTGAGGCTTGCCCACAT 60.973 57.895 8.17 0.00 34.01 3.21
2274 4034 2.594303 CGTTGAGGCTTGCCCACA 60.594 61.111 8.17 6.54 35.39 4.17
2275 4035 2.741486 TACCGTTGAGGCTTGCCCAC 62.741 60.000 8.17 3.93 46.52 4.61
2276 4036 2.463589 CTACCGTTGAGGCTTGCCCA 62.464 60.000 8.17 3.51 46.52 5.36
2277 4037 1.745489 CTACCGTTGAGGCTTGCCC 60.745 63.158 8.17 0.79 46.52 5.36
2278 4038 0.107654 ATCTACCGTTGAGGCTTGCC 60.108 55.000 2.97 2.97 46.52 4.52
2279 4039 1.666189 GAATCTACCGTTGAGGCTTGC 59.334 52.381 0.00 0.00 46.52 4.01
2280 4040 1.927174 CGAATCTACCGTTGAGGCTTG 59.073 52.381 0.00 0.00 46.52 4.01
2281 4041 1.739371 GCGAATCTACCGTTGAGGCTT 60.739 52.381 0.00 0.00 46.52 4.35
2282 4042 0.179108 GCGAATCTACCGTTGAGGCT 60.179 55.000 0.00 0.00 46.52 4.58
2283 4043 1.152383 GGCGAATCTACCGTTGAGGC 61.152 60.000 0.00 0.00 46.52 4.70
2285 4045 1.135083 AGTGGCGAATCTACCGTTGAG 60.135 52.381 0.00 0.00 0.00 3.02
2286 4046 0.892755 AGTGGCGAATCTACCGTTGA 59.107 50.000 0.00 0.00 0.00 3.18
2287 4047 0.999406 CAGTGGCGAATCTACCGTTG 59.001 55.000 0.00 0.00 0.00 4.10
2288 4048 0.108329 CCAGTGGCGAATCTACCGTT 60.108 55.000 0.00 0.00 0.00 4.44
2289 4049 1.255667 ACCAGTGGCGAATCTACCGT 61.256 55.000 9.78 0.00 0.00 4.83
2290 4050 0.742505 TACCAGTGGCGAATCTACCG 59.257 55.000 9.78 0.00 0.00 4.02
2291 4051 2.364324 TCATACCAGTGGCGAATCTACC 59.636 50.000 9.78 0.00 0.00 3.18
2292 4052 3.728076 TCATACCAGTGGCGAATCTAC 57.272 47.619 9.78 0.00 0.00 2.59
2293 4053 4.558697 CGATTCATACCAGTGGCGAATCTA 60.559 45.833 28.97 11.08 39.73 1.98
2294 4054 3.733337 GATTCATACCAGTGGCGAATCT 58.267 45.455 27.01 10.54 39.12 2.40
2295 4055 2.476619 CGATTCATACCAGTGGCGAATC 59.523 50.000 25.68 25.68 38.92 2.52
2296 4056 2.102420 TCGATTCATACCAGTGGCGAAT 59.898 45.455 17.56 17.56 0.00 3.34
2297 4057 1.478916 TCGATTCATACCAGTGGCGAA 59.521 47.619 9.78 10.34 0.00 4.70
2298 4058 1.067060 CTCGATTCATACCAGTGGCGA 59.933 52.381 9.78 7.35 0.00 5.54
2299 4059 1.202417 ACTCGATTCATACCAGTGGCG 60.202 52.381 9.78 2.61 0.00 5.69
2300 4060 2.604046 ACTCGATTCATACCAGTGGC 57.396 50.000 9.78 0.00 0.00 5.01
2301 4061 2.609459 GCAACTCGATTCATACCAGTGG 59.391 50.000 7.91 7.91 0.00 4.00
2302 4062 3.525537 AGCAACTCGATTCATACCAGTG 58.474 45.455 0.00 0.00 0.00 3.66
2303 4063 3.195610 TGAGCAACTCGATTCATACCAGT 59.804 43.478 0.00 0.00 32.35 4.00
2304 4064 3.785486 TGAGCAACTCGATTCATACCAG 58.215 45.455 0.00 0.00 32.35 4.00
2305 4065 3.885724 TGAGCAACTCGATTCATACCA 57.114 42.857 0.00 0.00 32.35 3.25
2306 4066 4.025396 CACATGAGCAACTCGATTCATACC 60.025 45.833 0.00 0.00 32.35 2.73
2320 4080 2.677524 GGCTTGCCCACATGAGCA 60.678 61.111 0.00 2.34 36.87 4.26
2348 4108 1.667236 TGCAGTCACTGAAACAGGTG 58.333 50.000 9.70 0.00 35.51 4.00
2602 4631 4.319766 GCCATCCACTAATTGCACGAATAG 60.320 45.833 0.00 0.00 0.00 1.73
2603 4632 3.563808 GCCATCCACTAATTGCACGAATA 59.436 43.478 0.00 0.00 0.00 1.75
2611 4640 3.402110 TGCTATCGCCATCCACTAATTG 58.598 45.455 0.00 0.00 34.43 2.32
2668 4705 4.921470 TCAACAAACTTATACAGCTCGC 57.079 40.909 0.00 0.00 0.00 5.03
2725 4768 6.496338 AGGTTTTAGAAAATAACTCGCAGG 57.504 37.500 0.00 0.00 0.00 4.85
2898 5502 4.937620 TGTCTATCAACTCAATTCAGTGGC 59.062 41.667 0.00 0.00 0.00 5.01
3014 6104 3.672295 CTCCGGTGCTCCTGAAGGC 62.672 68.421 0.00 0.00 34.44 4.35
3061 6154 2.268920 GAGTGGCAGATCCCGCAA 59.731 61.111 7.01 0.00 37.85 4.85
3619 6712 1.891919 GGCGTCCTTGCTGACAACA 60.892 57.895 0.00 0.00 34.88 3.33
3733 7273 8.514136 TGCAACACAAAATTAAGCAGTAATAC 57.486 30.769 0.00 0.00 31.82 1.89
3819 7424 2.825264 CCGAAGAGAGGGGCCATC 59.175 66.667 10.89 10.89 0.00 3.51
3837 7442 4.617875 CCGTTGGGCTTCAGTAGG 57.382 61.111 0.00 0.00 0.00 3.18
3942 7575 1.806542 TGATTTCTTCCAGTTGCGAGC 59.193 47.619 0.00 0.00 0.00 5.03
3970 7618 1.443533 TTACGCGCAAAATGCCTGC 60.444 52.632 5.73 0.00 41.12 4.85
3996 7829 2.024588 GCCACGCGCACAATATGG 59.975 61.111 5.73 5.51 37.47 2.74
4234 8079 1.445582 GTCACTCGGTTGTAGCGGG 60.446 63.158 0.00 0.00 46.42 6.13
4239 8084 2.652530 GGCGGTCACTCGGTTGTA 59.347 61.111 0.00 0.00 0.00 2.41
4262 8112 0.523519 CGTGAGCAGTGCTGAGAGTA 59.476 55.000 25.35 0.00 39.88 2.59
4362 8228 3.067601 CACCATGCATGCATACATCACTT 59.932 43.478 31.73 5.79 32.87 3.16
4386 8276 6.046593 ACTCAGTTTTCTCACGAACAACATA 58.953 36.000 0.00 0.00 0.00 2.29
4408 8298 2.291153 CCTTGTCATCCATCACCCAACT 60.291 50.000 0.00 0.00 0.00 3.16
4414 8304 1.474077 GCCAACCTTGTCATCCATCAC 59.526 52.381 0.00 0.00 0.00 3.06
4444 8334 3.745480 GCTAAGCAGGCAGTCCATTATCA 60.745 47.826 0.00 0.00 33.74 2.15
4499 8410 4.469657 TGGATGGAGTAATTATTGTGGCC 58.530 43.478 0.00 0.00 0.00 5.36
4562 8630 3.124806 GCGCCTTAGTTCTGGTAAAACTC 59.875 47.826 0.00 0.00 38.00 3.01
4599 8667 9.283768 TCTGTTTGATAGCTCATCTTTGTTTTA 57.716 29.630 0.00 0.00 34.46 1.52
4644 8718 0.955428 GCGCACCCTTCATCACTTGA 60.955 55.000 0.30 0.00 0.00 3.02
4657 8731 3.876198 CAGTTATGGGCGCGCACC 61.876 66.667 33.29 28.86 0.00 5.01
4658 8732 1.917782 TTTCAGTTATGGGCGCGCAC 61.918 55.000 34.42 32.34 0.00 5.34
4663 8737 5.730568 GCTTGTTAGATTTCAGTTATGGGCG 60.731 44.000 0.00 0.00 0.00 6.13
4665 8739 5.354234 ACGCTTGTTAGATTTCAGTTATGGG 59.646 40.000 0.00 0.00 0.00 4.00
4667 8741 6.831769 ACACGCTTGTTAGATTTCAGTTATG 58.168 36.000 0.00 0.00 28.43 1.90
4678 8752 0.242825 CTCGGGACACGCTTGTTAGA 59.757 55.000 0.00 0.00 43.86 2.10
4679 8753 1.352156 GCTCGGGACACGCTTGTTAG 61.352 60.000 0.00 0.00 43.86 2.34
4703 8777 2.156917 CAGGAGCAGAAATCAGTTGCA 58.843 47.619 0.00 0.00 40.22 4.08
4715 8789 2.797792 GCTAATCGTCAGTCAGGAGCAG 60.798 54.545 0.00 0.00 0.00 4.24
4716 8790 1.135139 GCTAATCGTCAGTCAGGAGCA 59.865 52.381 0.00 0.00 0.00 4.26
4717 8791 1.135139 TGCTAATCGTCAGTCAGGAGC 59.865 52.381 0.00 0.00 0.00 4.70
4725 8799 1.788621 CGCGTCGTGCTAATCGTCAG 61.789 60.000 0.00 0.00 43.27 3.51
4779 8861 0.519077 CTGGCTTCTCGTTTCCTTGC 59.481 55.000 0.00 0.00 0.00 4.01
4780 8862 2.169832 TCTGGCTTCTCGTTTCCTTG 57.830 50.000 0.00 0.00 0.00 3.61
4786 8868 1.004918 CGGGTTCTGGCTTCTCGTT 60.005 57.895 0.00 0.00 0.00 3.85
4788 8870 2.125512 CCGGGTTCTGGCTTCTCG 60.126 66.667 0.00 0.00 0.00 4.04
4822 8904 1.208358 CATCACGTGGTTGCTGCAG 59.792 57.895 17.00 10.11 0.00 4.41
4846 8928 2.815647 GAGCTTTCGGTCGCCCTG 60.816 66.667 0.00 0.00 0.00 4.45
4887 8969 0.109226 GAAGTTCTGCGCGGAGTACT 60.109 55.000 29.09 29.09 0.00 2.73
4952 9034 0.659957 GCGATTCTCATGTTCTGGGC 59.340 55.000 0.00 0.00 0.00 5.36
4955 9037 1.938577 CCTGGCGATTCTCATGTTCTG 59.061 52.381 0.00 0.00 0.00 3.02
5101 9189 6.687139 GCCCCGGAACTTATACTGATCTTTAA 60.687 42.308 0.73 0.00 0.00 1.52
5102 9190 5.221581 GCCCCGGAACTTATACTGATCTTTA 60.222 44.000 0.73 0.00 0.00 1.85
5184 9272 0.109342 CCCTGCAGTTTCTGTGGAGT 59.891 55.000 13.81 0.00 31.75 3.85
5232 9320 0.745468 GAGTGTATCACGGTCTCCCC 59.255 60.000 0.00 0.00 39.64 4.81
5241 9330 6.495706 TGACATCATCTAACGAGTGTATCAC 58.504 40.000 0.00 0.00 34.10 3.06
5294 9387 9.846248 ATGAACTGCACATAAAGTCTTAAATTC 57.154 29.630 0.00 0.00 0.00 2.17
5324 9417 3.806521 AGCAGCAACTTGATATCATCGAC 59.193 43.478 6.17 0.00 0.00 4.20
5338 9435 3.314553 TCGAGTAACAAGTAGCAGCAAC 58.685 45.455 0.00 0.00 0.00 4.17
5367 9464 5.293814 TGTGTGTTTTCTTGCAAATTCATGG 59.706 36.000 0.00 0.00 0.00 3.66
5387 9484 1.202651 CGAGTGTCCTCCCTTTTGTGT 60.203 52.381 0.00 0.00 33.93 3.72
5407 9504 7.763985 CACTCTCCTTTCTTCTAATCCTTTCTC 59.236 40.741 0.00 0.00 0.00 2.87
5439 9541 0.264955 CTCCCTCCCCCTGCTACTAA 59.735 60.000 0.00 0.00 0.00 2.24
5440 9542 0.929734 ACTCCCTCCCCCTGCTACTA 60.930 60.000 0.00 0.00 0.00 1.82



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.