Multiple sequence alignment - TraesCS7D01G327500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G327500 chr7D 100.000 5766 0 0 1 5766 418617922 418612157 0.000000e+00 10648
1 TraesCS7D01G327500 chr7D 98.639 2792 32 5 2980 5766 418902787 418899997 0.000000e+00 4940
2 TraesCS7D01G327500 chr7D 93.401 2076 63 22 450 2490 418904812 418902776 0.000000e+00 3007
3 TraesCS7D01G327500 chr7D 94.867 1948 55 21 1 1906 417932263 417930319 0.000000e+00 3001
4 TraesCS7D01G327500 chr7D 94.519 1569 58 14 4207 5766 418394481 418392932 0.000000e+00 2396
5 TraesCS7D01G327500 chr7D 93.394 1438 82 6 3559 4991 417929060 417927631 0.000000e+00 2117
6 TraesCS7D01G327500 chr7D 92.768 1438 88 8 3559 4991 418054067 418052641 0.000000e+00 2065
7 TraesCS7D01G327500 chr7D 96.805 939 26 1 3 941 418070194 418069260 0.000000e+00 1565
8 TraesCS7D01G327500 chr7D 98.414 883 13 1 1024 1906 418057180 418056299 0.000000e+00 1552
9 TraesCS7D01G327500 chr7D 89.817 766 52 12 5006 5766 417927647 417926903 0.000000e+00 959
10 TraesCS7D01G327500 chr7D 89.817 766 52 12 5006 5766 418052657 418051913 0.000000e+00 959
11 TraesCS7D01G327500 chr7D 95.944 567 18 3 3658 4222 418396269 418395706 0.000000e+00 915
12 TraesCS7D01G327500 chr7D 98.755 482 6 0 2487 2968 128916140 128915659 0.000000e+00 857
13 TraesCS7D01G327500 chr7D 97.363 493 5 1 2487 2979 452446549 452447033 0.000000e+00 832
14 TraesCS7D01G327500 chr7D 90.034 592 34 9 1905 2488 417930261 417929687 0.000000e+00 743
15 TraesCS7D01G327500 chr7D 90.034 592 34 9 1905 2488 418056241 418055667 0.000000e+00 743
16 TraesCS7D01G327500 chr7D 89.428 577 29 13 2982 3556 417929694 417929148 0.000000e+00 699
17 TraesCS7D01G327500 chr7D 89.081 577 28 14 2982 3556 418055674 418055131 0.000000e+00 684
18 TraesCS7D01G327500 chr7D 89.071 183 17 2 129 311 383865450 383865271 2.090000e-54 224
19 TraesCS7D01G327500 chr7D 85.027 187 24 3 130 316 150768538 150768356 2.740000e-43 187
20 TraesCS7D01G327500 chr7D 97.647 85 2 0 949 1033 418069219 418069135 4.660000e-31 147
21 TraesCS7D01G327500 chr7D 92.708 96 3 3 3572 3666 418397514 418397422 1.010000e-27 135
22 TraesCS7D01G327500 chr7A 90.829 1941 106 26 3835 5766 483488808 483486931 0.000000e+00 2532
23 TraesCS7D01G327500 chr7A 94.383 1442 67 8 3555 4991 483944894 483943462 0.000000e+00 2202
24 TraesCS7D01G327500 chr7A 92.047 943 28 7 790 1696 483495788 483494857 0.000000e+00 1282
25 TraesCS7D01G327500 chr7A 93.530 881 22 15 851 1696 483947170 483946290 0.000000e+00 1279
26 TraesCS7D01G327500 chr7A 93.813 695 24 8 5006 5694 483943478 483942797 0.000000e+00 1027
27 TraesCS7D01G327500 chr7A 94.868 643 28 2 3580 4222 483746833 483746196 0.000000e+00 1000
28 TraesCS7D01G327500 chr7A 94.491 599 25 6 4210 4806 483744965 483744373 0.000000e+00 917
29 TraesCS7D01G327500 chr7A 92.411 593 36 6 1905 2490 483946091 483945501 0.000000e+00 837
30 TraesCS7D01G327500 chr7A 88.927 578 35 13 2982 3556 483493892 483493341 0.000000e+00 686
31 TraesCS7D01G327500 chr7A 86.679 548 29 14 2982 3522 483945510 483945000 8.380000e-158 568
32 TraesCS7D01G327500 chr7A 93.130 393 15 4 5274 5666 483654903 483654523 3.020000e-157 566
33 TraesCS7D01G327500 chr7A 88.836 421 25 6 2077 2490 483494288 483493883 1.120000e-136 497
34 TraesCS7D01G327500 chr7A 94.035 285 16 1 3555 3839 483493257 483492974 1.150000e-116 431
35 TraesCS7D01G327500 chr7A 93.644 236 14 1 5042 5276 483690269 483690034 9.190000e-93 351
36 TraesCS7D01G327500 chr7A 97.436 156 3 1 1751 1906 483494857 483494703 1.230000e-66 265
37 TraesCS7D01G327500 chr7A 97.436 156 3 1 1751 1906 483946290 483946136 1.230000e-66 265
38 TraesCS7D01G327500 chr7A 92.778 180 12 1 1905 2084 483494658 483494480 5.730000e-65 259
39 TraesCS7D01G327500 chr7B 94.240 1441 71 6 3555 4991 433869681 433868249 0.000000e+00 2191
40 TraesCS7D01G327500 chr7B 93.737 1437 63 11 3559 4991 434362532 434361119 0.000000e+00 2130
41 TraesCS7D01G327500 chr7B 88.809 1528 68 45 450 1906 434365319 434363824 0.000000e+00 1779
42 TraesCS7D01G327500 chr7B 97.286 958 21 3 949 1906 433871876 433870924 0.000000e+00 1620
43 TraesCS7D01G327500 chr7B 95.218 962 35 5 949 1906 212776020 212776974 0.000000e+00 1511
44 TraesCS7D01G327500 chr7B 96.046 607 23 1 5006 5611 434361135 434360529 0.000000e+00 987
45 TraesCS7D01G327500 chr7B 88.743 764 61 14 5006 5766 433868265 433867524 0.000000e+00 911
46 TraesCS7D01G327500 chr7B 94.128 579 30 3 2980 3556 434363196 434362620 0.000000e+00 878
47 TraesCS7D01G327500 chr7B 92.308 585 37 6 1908 2490 434363763 434363185 0.000000e+00 824
48 TraesCS7D01G327500 chr7B 96.146 493 19 0 2487 2979 521568934 521569426 0.000000e+00 806
49 TraesCS7D01G327500 chr7B 89.882 593 37 7 1905 2490 433870879 433870303 0.000000e+00 741
50 TraesCS7D01G327500 chr7B 89.428 577 30 15 2982 3556 433870312 433869765 0.000000e+00 699
51 TraesCS7D01G327500 chr7B 91.700 506 36 5 1905 2407 212777012 212777514 0.000000e+00 697
52 TraesCS7D01G327500 chr7B 78.261 1150 181 46 3797 4899 212778622 212779749 0.000000e+00 675
53 TraesCS7D01G327500 chr7B 81.943 731 106 20 5044 5766 212779783 212780495 3.850000e-166 595
54 TraesCS7D01G327500 chr7B 83.658 514 46 15 450 932 434173119 434172613 3.170000e-122 449
55 TraesCS7D01G327500 chr7B 96.094 256 7 3 5513 5766 434360561 434360307 1.160000e-111 414
56 TraesCS7D01G327500 chr7B 81.363 499 60 18 450 939 433872395 433871921 5.450000e-100 375
57 TraesCS7D01G327500 chr7B 88.930 271 21 5 2982 3252 212777679 212777940 5.570000e-85 326
58 TraesCS7D01G327500 chr7B 96.703 182 6 0 5585 5766 434167019 434166838 2.610000e-78 303
59 TraesCS7D01G327500 chr7B 83.756 197 26 5 121 316 112650285 112650094 1.280000e-41 182
60 TraesCS7D01G327500 chr7B 90.833 120 11 0 4 123 212774674 212774793 1.660000e-35 161
61 TraesCS7D01G327500 chr7B 87.931 116 11 2 317 431 433872735 433872622 3.620000e-27 134
62 TraesCS7D01G327500 chr4D 98.347 484 8 0 2485 2968 508679273 508678790 0.000000e+00 850
63 TraesCS7D01G327500 chr4D 86.022 186 22 3 130 314 116890921 116890739 4.560000e-46 196
64 TraesCS7D01G327500 chr6D 97.576 495 12 0 2485 2979 462416317 462415823 0.000000e+00 848
65 TraesCS7D01G327500 chr6D 85.492 193 22 5 121 311 354551009 354551197 4.560000e-46 196
66 TraesCS7D01G327500 chr1D 98.542 480 7 0 2487 2966 436854501 436854980 0.000000e+00 848
67 TraesCS7D01G327500 chr1D 97.166 494 6 1 2487 2980 286380660 286380175 0.000000e+00 828
68 TraesCS7D01G327500 chr1D 96.115 489 19 0 2486 2974 361476895 361477383 0.000000e+00 798
69 TraesCS7D01G327500 chr5D 96.680 482 16 0 2487 2968 117875333 117875814 0.000000e+00 802
70 TraesCS7D01G327500 chr5D 86.339 183 22 2 129 311 470464918 470465097 4.560000e-46 196
71 TraesCS7D01G327500 chr5B 92.767 318 20 2 1249 1563 101893622 101893939 1.890000e-124 457
72 TraesCS7D01G327500 chr5B 94.118 187 11 0 1579 1765 290922982 290922796 9.460000e-73 285
73 TraesCS7D01G327500 chr2B 93.846 260 16 0 1009 1268 42564790 42565049 5.420000e-105 392
74 TraesCS7D01G327500 chr2D 85.870 184 22 3 129 311 297304694 297304514 5.900000e-45 193


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G327500 chr7D 418612157 418617922 5765 True 10648.000000 10648 100.000000 1 5766 1 chr7D.!!$R4 5765
1 TraesCS7D01G327500 chr7D 418899997 418904812 4815 True 3973.500000 4940 96.020000 450 5766 2 chr7D.!!$R9 5316
2 TraesCS7D01G327500 chr7D 417926903 417932263 5360 True 1503.800000 3001 91.508000 1 5766 5 chr7D.!!$R5 5765
3 TraesCS7D01G327500 chr7D 418051913 418057180 5267 True 1200.600000 2065 92.022800 1024 5766 5 chr7D.!!$R6 4742
4 TraesCS7D01G327500 chr7D 418392932 418397514 4582 True 1148.666667 2396 94.390333 3572 5766 3 chr7D.!!$R8 2194
5 TraesCS7D01G327500 chr7D 418069135 418070194 1059 True 856.000000 1565 97.226000 3 1033 2 chr7D.!!$R7 1030
6 TraesCS7D01G327500 chr7A 483486931 483488808 1877 True 2532.000000 2532 90.829000 3835 5766 1 chr7A.!!$R1 1931
7 TraesCS7D01G327500 chr7A 483942797 483947170 4373 True 1029.666667 2202 93.042000 851 5694 6 chr7A.!!$R6 4843
8 TraesCS7D01G327500 chr7A 483744373 483746833 2460 True 958.500000 1000 94.679500 3580 4806 2 chr7A.!!$R5 1226
9 TraesCS7D01G327500 chr7A 483492974 483495788 2814 True 570.000000 1282 92.343167 790 3839 6 chr7A.!!$R4 3049
10 TraesCS7D01G327500 chr7B 434360307 434365319 5012 True 1168.666667 2130 93.520333 450 5766 6 chr7B.!!$R5 5316
11 TraesCS7D01G327500 chr7B 433867524 433872735 5211 True 953.000000 2191 89.839000 317 5766 7 chr7B.!!$R4 5449
12 TraesCS7D01G327500 chr7B 212774674 212780495 5821 False 660.833333 1511 87.814167 4 5766 6 chr7B.!!$F2 5762
13 TraesCS7D01G327500 chr7B 434172613 434173119 506 True 449.000000 449 83.658000 450 932 1 chr7B.!!$R3 482


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
882 1494 0.406361 TCCTTTGTAAATGGGCCGGT 59.594 50.0 1.9 0.0 41.22 5.28 F
2504 3551 0.040425 CCAAGGTTTTTGAGTCGCCG 60.040 55.0 0.0 0.0 0.00 6.46 F
2648 3695 0.036448 ACAGCAGCAGAAGAGCACAT 59.964 50.0 0.0 0.0 36.85 3.21 F
2705 3752 0.036952 CATATAGAGCCCACCCTGCG 60.037 60.0 0.0 0.0 0.00 5.18 F
2804 3851 0.107017 CCCAGTCCCCACATGATCAC 60.107 60.0 0.0 0.0 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2629 3676 0.036448 ATGTGCTCTTCTGCTGCTGT 59.964 50.000 0.00 0.00 0.00 4.40 R
4150 7555 1.747709 AAGCTTCTGCAGAATCGCAT 58.252 45.000 30.92 22.04 42.06 4.73 R
4460 10369 1.888512 TGAAACAATGCAGGAAGCCTC 59.111 47.619 0.00 0.00 44.83 4.70 R
4578 10495 8.888716 GTTTTTGTTTTTGTTCCATACATTCCT 58.111 29.630 0.00 0.00 36.44 3.36 R
4781 10699 8.794335 AATAGTTGGAGTCAGAAAATTAGACC 57.206 34.615 0.00 0.00 32.82 3.85 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 3.005897 ACAGAAGAGTCTCGCTTAAAGCA 59.994 43.478 0.00 0.00 34.22 3.91
95 96 4.410400 CGCTCCCCTTGTCACCCC 62.410 72.222 0.00 0.00 0.00 4.95
126 127 6.401047 TCTAAGTTGTCTTCCTTTTCGAGA 57.599 37.500 0.00 0.00 35.36 4.04
214 215 3.062466 CTGCACTCCGGGAGTCGA 61.062 66.667 26.53 14.58 41.37 4.20
237 238 2.193447 ACGATCGTTGATCACAATCCG 58.807 47.619 16.60 0.00 38.84 4.18
355 356 2.797278 GGCCCGATGAGGTGACGAT 61.797 63.158 0.00 0.00 38.74 3.73
421 422 1.081906 CATGCAGCCAACGTGACAC 60.082 57.895 0.00 0.00 0.00 3.67
882 1494 0.406361 TCCTTTGTAAATGGGCCGGT 59.594 50.000 1.90 0.00 41.22 5.28
884 1496 1.540267 CTTTGTAAATGGGCCGGTCA 58.460 50.000 9.07 5.06 0.00 4.02
2030 2780 3.733443 AAAGTTTTGGCTTTGCTCGAT 57.267 38.095 0.00 0.00 37.31 3.59
2031 2781 3.733443 AAGTTTTGGCTTTGCTCGATT 57.267 38.095 0.00 0.00 0.00 3.34
2328 3282 0.465642 CCCCGGCCCTATGAAAAGTC 60.466 60.000 0.00 0.00 0.00 3.01
2488 3535 9.764363 TTTGTTAAATATTACATGTGTTGCCAA 57.236 25.926 9.11 0.00 0.00 4.52
2489 3536 8.978564 TGTTAAATATTACATGTGTTGCCAAG 57.021 30.769 9.11 0.00 0.00 3.61
2490 3537 8.031864 TGTTAAATATTACATGTGTTGCCAAGG 58.968 33.333 9.11 0.00 0.00 3.61
2491 3538 6.603940 AAATATTACATGTGTTGCCAAGGT 57.396 33.333 9.11 0.00 0.00 3.50
2492 3539 6.603940 AATATTACATGTGTTGCCAAGGTT 57.396 33.333 9.11 0.00 0.00 3.50
2493 3540 4.953940 ATTACATGTGTTGCCAAGGTTT 57.046 36.364 9.11 0.00 0.00 3.27
2494 3541 4.744795 TTACATGTGTTGCCAAGGTTTT 57.255 36.364 9.11 0.00 0.00 2.43
2495 3542 3.625649 ACATGTGTTGCCAAGGTTTTT 57.374 38.095 0.00 0.00 0.00 1.94
2496 3543 3.269178 ACATGTGTTGCCAAGGTTTTTG 58.731 40.909 0.00 0.00 0.00 2.44
2497 3544 3.055530 ACATGTGTTGCCAAGGTTTTTGA 60.056 39.130 0.00 0.00 0.00 2.69
2498 3545 3.244033 TGTGTTGCCAAGGTTTTTGAG 57.756 42.857 0.00 0.00 0.00 3.02
2499 3546 2.564947 TGTGTTGCCAAGGTTTTTGAGT 59.435 40.909 0.00 0.00 0.00 3.41
2500 3547 3.186909 GTGTTGCCAAGGTTTTTGAGTC 58.813 45.455 0.00 0.00 0.00 3.36
2501 3548 2.159310 TGTTGCCAAGGTTTTTGAGTCG 60.159 45.455 0.00 0.00 0.00 4.18
2502 3549 0.383949 TGCCAAGGTTTTTGAGTCGC 59.616 50.000 0.00 0.00 0.00 5.19
2503 3550 0.318699 GCCAAGGTTTTTGAGTCGCC 60.319 55.000 0.00 0.00 0.00 5.54
2504 3551 0.040425 CCAAGGTTTTTGAGTCGCCG 60.040 55.000 0.00 0.00 0.00 6.46
2505 3552 0.941542 CAAGGTTTTTGAGTCGCCGA 59.058 50.000 0.00 0.00 0.00 5.54
2506 3553 1.069906 CAAGGTTTTTGAGTCGCCGAG 60.070 52.381 0.00 0.00 0.00 4.63
2507 3554 0.106149 AGGTTTTTGAGTCGCCGAGT 59.894 50.000 0.00 0.00 0.00 4.18
2508 3555 0.511653 GGTTTTTGAGTCGCCGAGTC 59.488 55.000 14.89 14.89 33.05 3.36
2509 3556 1.214367 GTTTTTGAGTCGCCGAGTCA 58.786 50.000 20.07 20.07 39.83 3.41
2510 3557 1.595794 GTTTTTGAGTCGCCGAGTCAA 59.404 47.619 28.32 28.32 46.25 3.18
2511 3558 4.966005 TTGAGTCGCCGAGTCAAG 57.034 55.556 28.32 0.00 44.07 3.02
2512 3559 1.372997 TTGAGTCGCCGAGTCAAGC 60.373 57.895 28.32 2.51 44.07 4.01
2513 3560 2.507324 GAGTCGCCGAGTCAAGCC 60.507 66.667 16.71 0.00 32.72 4.35
2514 3561 3.282745 GAGTCGCCGAGTCAAGCCA 62.283 63.158 16.71 0.00 32.72 4.75
2515 3562 2.357034 GTCGCCGAGTCAAGCCAA 60.357 61.111 0.00 0.00 0.00 4.52
2516 3563 2.048222 TCGCCGAGTCAAGCCAAG 60.048 61.111 0.00 0.00 0.00 3.61
2517 3564 2.357517 CGCCGAGTCAAGCCAAGT 60.358 61.111 0.00 0.00 0.00 3.16
2518 3565 2.383527 CGCCGAGTCAAGCCAAGTC 61.384 63.158 0.00 0.00 0.00 3.01
2519 3566 2.383527 GCCGAGTCAAGCCAAGTCG 61.384 63.158 0.00 1.88 38.89 4.18
2520 3567 2.383527 CCGAGTCAAGCCAAGTCGC 61.384 63.158 3.08 0.00 38.07 5.19
2521 3568 2.383527 CGAGTCAAGCCAAGTCGCC 61.384 63.158 0.00 0.00 33.32 5.54
2522 3569 2.357517 AGTCAAGCCAAGTCGCCG 60.358 61.111 0.00 0.00 0.00 6.46
2523 3570 2.357034 GTCAAGCCAAGTCGCCGA 60.357 61.111 0.00 0.00 0.00 5.54
2524 3571 2.048222 TCAAGCCAAGTCGCCGAG 60.048 61.111 0.00 0.00 0.00 4.63
2525 3572 3.121030 CAAGCCAAGTCGCCGAGG 61.121 66.667 0.00 0.00 0.00 4.63
2537 3584 4.880537 CCGAGGCTGCGGCTAGTG 62.881 72.222 18.85 5.07 45.38 2.74
2538 3585 4.880537 CGAGGCTGCGGCTAGTGG 62.881 72.222 18.85 0.00 38.98 4.00
2541 3588 4.785453 GGCTGCGGCTAGTGGCTT 62.785 66.667 18.85 0.00 41.46 4.35
2542 3589 3.503363 GCTGCGGCTAGTGGCTTG 61.503 66.667 11.21 0.00 41.46 4.01
2543 3590 3.503363 CTGCGGCTAGTGGCTTGC 61.503 66.667 0.00 8.81 41.46 4.01
2544 3591 3.965539 CTGCGGCTAGTGGCTTGCT 62.966 63.158 14.88 0.00 40.79 3.91
2545 3592 3.503363 GCGGCTAGTGGCTTGCTG 61.503 66.667 8.54 6.96 40.50 4.41
2546 3593 2.821366 CGGCTAGTGGCTTGCTGG 60.821 66.667 0.00 0.00 41.46 4.85
2547 3594 3.136791 GGCTAGTGGCTTGCTGGC 61.137 66.667 0.00 4.66 41.46 4.85
2548 3595 2.045536 GCTAGTGGCTTGCTGGCT 60.046 61.111 0.00 0.00 42.34 4.75
2549 3596 1.676967 GCTAGTGGCTTGCTGGCTT 60.677 57.895 0.00 0.00 42.34 4.35
2550 3597 1.930908 GCTAGTGGCTTGCTGGCTTG 61.931 60.000 0.00 0.00 42.34 4.01
2551 3598 0.321919 CTAGTGGCTTGCTGGCTTGA 60.322 55.000 5.59 0.00 42.34 3.02
2552 3599 0.321919 TAGTGGCTTGCTGGCTTGAG 60.322 55.000 5.59 0.00 42.34 3.02
2553 3600 1.900498 GTGGCTTGCTGGCTTGAGT 60.900 57.895 5.59 0.00 42.34 3.41
2554 3601 1.601759 TGGCTTGCTGGCTTGAGTC 60.602 57.895 5.59 0.00 42.34 3.36
2555 3602 2.684843 GGCTTGCTGGCTTGAGTCG 61.685 63.158 1.99 0.00 38.32 4.18
2556 3603 2.684843 GCTTGCTGGCTTGAGTCGG 61.685 63.158 0.00 0.00 0.00 4.79
2559 3606 4.742201 GCTGGCTTGAGTCGGCGA 62.742 66.667 4.99 4.99 42.60 5.54
2560 3607 2.811317 CTGGCTTGAGTCGGCGAC 60.811 66.667 31.33 31.33 0.00 5.19
2561 3608 3.288308 CTGGCTTGAGTCGGCGACT 62.288 63.158 39.68 39.68 46.42 4.18
2562 3609 2.048127 GGCTTGAGTCGGCGACTT 60.048 61.111 39.20 24.81 43.53 3.01
2563 3610 2.383527 GGCTTGAGTCGGCGACTTG 61.384 63.158 39.20 30.39 43.53 3.16
2564 3611 2.383527 GCTTGAGTCGGCGACTTGG 61.384 63.158 39.20 29.95 43.53 3.61
2565 3612 2.357034 TTGAGTCGGCGACTTGGC 60.357 61.111 39.20 27.72 43.53 4.52
2566 3613 2.771763 CTTGAGTCGGCGACTTGGCT 62.772 60.000 39.20 20.66 43.53 4.75
2567 3614 2.048127 GAGTCGGCGACTTGGCTT 60.048 61.111 39.20 19.90 43.53 4.35
2568 3615 2.357517 AGTCGGCGACTTGGCTTG 60.358 61.111 34.91 0.00 40.28 4.01
2569 3616 2.357034 GTCGGCGACTTGGCTTGA 60.357 61.111 31.15 0.00 42.02 3.02
2570 3617 1.741770 GTCGGCGACTTGGCTTGAT 60.742 57.895 31.15 0.00 42.02 2.57
2571 3618 1.003839 TCGGCGACTTGGCTTGATT 60.004 52.632 4.99 0.00 42.02 2.57
2572 3619 0.248012 TCGGCGACTTGGCTTGATTA 59.752 50.000 4.99 0.00 42.02 1.75
2573 3620 0.652592 CGGCGACTTGGCTTGATTAG 59.347 55.000 0.00 0.00 42.02 1.73
2574 3621 1.739067 GGCGACTTGGCTTGATTAGT 58.261 50.000 0.00 0.00 40.72 2.24
2575 3622 1.666189 GGCGACTTGGCTTGATTAGTC 59.334 52.381 0.00 0.00 40.72 2.59
2578 3625 1.666189 GACTTGGCTTGATTAGTCGCC 59.334 52.381 0.00 0.00 42.78 5.54
2579 3626 1.017387 CTTGGCTTGATTAGTCGCCC 58.983 55.000 0.00 0.00 41.80 6.13
2580 3627 0.393808 TTGGCTTGATTAGTCGCCCC 60.394 55.000 0.00 0.00 41.80 5.80
2581 3628 1.223487 GGCTTGATTAGTCGCCCCA 59.777 57.895 0.00 0.00 36.56 4.96
2582 3629 0.393808 GGCTTGATTAGTCGCCCCAA 60.394 55.000 0.00 0.00 36.56 4.12
2583 3630 1.017387 GCTTGATTAGTCGCCCCAAG 58.983 55.000 0.00 0.00 37.76 3.61
2584 3631 1.679032 GCTTGATTAGTCGCCCCAAGT 60.679 52.381 0.00 0.00 37.23 3.16
2585 3632 2.280628 CTTGATTAGTCGCCCCAAGTC 58.719 52.381 0.00 0.00 32.06 3.01
2586 3633 0.174845 TGATTAGTCGCCCCAAGTCG 59.825 55.000 0.00 0.00 0.00 4.18
2587 3634 1.152383 GATTAGTCGCCCCAAGTCGC 61.152 60.000 0.00 0.00 0.00 5.19
2588 3635 2.588856 ATTAGTCGCCCCAAGTCGCC 62.589 60.000 0.00 0.00 0.00 5.54
2590 3637 4.778143 GTCGCCCCAAGTCGCCAT 62.778 66.667 0.00 0.00 0.00 4.40
2591 3638 4.776322 TCGCCCCAAGTCGCCATG 62.776 66.667 0.00 0.00 0.00 3.66
2594 3641 4.738998 CCCCAAGTCGCCATGGCA 62.739 66.667 34.93 19.88 42.06 4.92
2595 3642 3.443045 CCCAAGTCGCCATGGCAC 61.443 66.667 34.93 28.55 42.06 5.01
2610 3657 2.972625 TGGCACAACAGTACATAGAGC 58.027 47.619 0.00 0.00 31.92 4.09
2611 3658 2.301583 TGGCACAACAGTACATAGAGCA 59.698 45.455 0.00 0.00 31.92 4.26
2612 3659 2.932614 GGCACAACAGTACATAGAGCAG 59.067 50.000 0.00 0.00 0.00 4.24
2613 3660 2.349886 GCACAACAGTACATAGAGCAGC 59.650 50.000 0.00 0.00 0.00 5.25
2614 3661 3.588955 CACAACAGTACATAGAGCAGCA 58.411 45.455 0.00 0.00 0.00 4.41
2615 3662 3.615937 CACAACAGTACATAGAGCAGCAG 59.384 47.826 0.00 0.00 0.00 4.24
2616 3663 3.511540 ACAACAGTACATAGAGCAGCAGA 59.488 43.478 0.00 0.00 0.00 4.26
2617 3664 4.111198 CAACAGTACATAGAGCAGCAGAG 58.889 47.826 0.00 0.00 0.00 3.35
2618 3665 2.100584 ACAGTACATAGAGCAGCAGAGC 59.899 50.000 0.00 0.00 0.00 4.09
2619 3666 2.100418 CAGTACATAGAGCAGCAGAGCA 59.900 50.000 0.00 0.00 36.85 4.26
2620 3667 2.100584 AGTACATAGAGCAGCAGAGCAC 59.899 50.000 0.00 0.00 36.85 4.40
2621 3668 0.900421 ACATAGAGCAGCAGAGCACA 59.100 50.000 0.00 0.00 36.85 4.57
2622 3669 1.485480 ACATAGAGCAGCAGAGCACAT 59.515 47.619 0.00 0.00 36.85 3.21
2623 3670 2.697229 ACATAGAGCAGCAGAGCACATA 59.303 45.455 0.00 0.00 36.85 2.29
2624 3671 3.243805 ACATAGAGCAGCAGAGCACATAG 60.244 47.826 0.00 0.00 36.85 2.23
2625 3672 1.482954 AGAGCAGCAGAGCACATAGA 58.517 50.000 0.00 0.00 36.85 1.98
2626 3673 2.040939 AGAGCAGCAGAGCACATAGAT 58.959 47.619 0.00 0.00 36.85 1.98
2627 3674 3.229293 AGAGCAGCAGAGCACATAGATA 58.771 45.455 0.00 0.00 36.85 1.98
2628 3675 3.833650 AGAGCAGCAGAGCACATAGATAT 59.166 43.478 0.00 0.00 36.85 1.63
2629 3676 5.015515 AGAGCAGCAGAGCACATAGATATA 58.984 41.667 0.00 0.00 36.85 0.86
2630 3677 5.070770 AGCAGCAGAGCACATAGATATAC 57.929 43.478 0.00 0.00 36.85 1.47
2631 3678 4.525874 AGCAGCAGAGCACATAGATATACA 59.474 41.667 0.00 0.00 36.85 2.29
2632 3679 4.863689 GCAGCAGAGCACATAGATATACAG 59.136 45.833 0.00 0.00 0.00 2.74
2633 3680 4.863689 CAGCAGAGCACATAGATATACAGC 59.136 45.833 0.00 0.00 0.00 4.40
2634 3681 4.525874 AGCAGAGCACATAGATATACAGCA 59.474 41.667 0.00 0.00 0.00 4.41
2635 3682 4.863689 GCAGAGCACATAGATATACAGCAG 59.136 45.833 0.00 0.00 0.00 4.24
2636 3683 4.863689 CAGAGCACATAGATATACAGCAGC 59.136 45.833 0.00 0.00 0.00 5.25
2637 3684 4.525874 AGAGCACATAGATATACAGCAGCA 59.474 41.667 0.00 0.00 0.00 4.41
2638 3685 4.818642 AGCACATAGATATACAGCAGCAG 58.181 43.478 0.00 0.00 0.00 4.24
2639 3686 4.525874 AGCACATAGATATACAGCAGCAGA 59.474 41.667 0.00 0.00 0.00 4.26
2640 3687 5.011431 AGCACATAGATATACAGCAGCAGAA 59.989 40.000 0.00 0.00 0.00 3.02
2641 3688 5.348179 GCACATAGATATACAGCAGCAGAAG 59.652 44.000 0.00 0.00 0.00 2.85
2642 3689 6.685657 CACATAGATATACAGCAGCAGAAGA 58.314 40.000 0.00 0.00 0.00 2.87
2643 3690 6.807720 CACATAGATATACAGCAGCAGAAGAG 59.192 42.308 0.00 0.00 0.00 2.85
2644 3691 4.255833 AGATATACAGCAGCAGAAGAGC 57.744 45.455 0.00 0.00 0.00 4.09
2645 3692 3.640498 AGATATACAGCAGCAGAAGAGCA 59.360 43.478 0.00 0.00 36.85 4.26
2646 3693 2.021355 ATACAGCAGCAGAAGAGCAC 57.979 50.000 0.00 0.00 36.85 4.40
2647 3694 0.681175 TACAGCAGCAGAAGAGCACA 59.319 50.000 0.00 0.00 36.85 4.57
2648 3695 0.036448 ACAGCAGCAGAAGAGCACAT 59.964 50.000 0.00 0.00 36.85 3.21
2649 3696 1.277273 ACAGCAGCAGAAGAGCACATA 59.723 47.619 0.00 0.00 36.85 2.29
2650 3697 2.093075 ACAGCAGCAGAAGAGCACATAT 60.093 45.455 0.00 0.00 36.85 1.78
2651 3698 3.133542 ACAGCAGCAGAAGAGCACATATA 59.866 43.478 0.00 0.00 36.85 0.86
2652 3699 3.493877 CAGCAGCAGAAGAGCACATATAC 59.506 47.826 0.00 0.00 36.85 1.47
2653 3700 3.133542 AGCAGCAGAAGAGCACATATACA 59.866 43.478 0.00 0.00 36.85 2.29
2654 3701 3.873361 GCAGCAGAAGAGCACATATACAA 59.127 43.478 0.00 0.00 36.85 2.41
2655 3702 4.260538 GCAGCAGAAGAGCACATATACAAC 60.261 45.833 0.00 0.00 36.85 3.32
2656 3703 4.872124 CAGCAGAAGAGCACATATACAACA 59.128 41.667 0.00 0.00 36.85 3.33
2657 3704 5.006455 CAGCAGAAGAGCACATATACAACAG 59.994 44.000 0.00 0.00 36.85 3.16
2658 3705 5.105187 AGCAGAAGAGCACATATACAACAGA 60.105 40.000 0.00 0.00 36.85 3.41
2659 3706 5.233902 GCAGAAGAGCACATATACAACAGAG 59.766 44.000 0.00 0.00 0.00 3.35
2660 3707 6.567959 CAGAAGAGCACATATACAACAGAGA 58.432 40.000 0.00 0.00 0.00 3.10
2661 3708 7.038048 CAGAAGAGCACATATACAACAGAGAA 58.962 38.462 0.00 0.00 0.00 2.87
2662 3709 7.547019 CAGAAGAGCACATATACAACAGAGAAA 59.453 37.037 0.00 0.00 0.00 2.52
2663 3710 8.097038 AGAAGAGCACATATACAACAGAGAAAA 58.903 33.333 0.00 0.00 0.00 2.29
2664 3711 8.798859 AAGAGCACATATACAACAGAGAAAAT 57.201 30.769 0.00 0.00 0.00 1.82
2665 3712 9.890629 AAGAGCACATATACAACAGAGAAAATA 57.109 29.630 0.00 0.00 0.00 1.40
2684 3731 9.487790 AGAAAATATACTTCATCTAAGCAGAGC 57.512 33.333 0.00 0.00 38.93 4.09
2685 3732 9.265901 GAAAATATACTTCATCTAAGCAGAGCA 57.734 33.333 0.00 0.00 38.93 4.26
2686 3733 8.600449 AAATATACTTCATCTAAGCAGAGCAC 57.400 34.615 0.00 0.00 38.93 4.40
2687 3734 3.969287 ACTTCATCTAAGCAGAGCACA 57.031 42.857 0.00 0.00 38.93 4.57
2688 3735 4.484537 ACTTCATCTAAGCAGAGCACAT 57.515 40.909 0.00 0.00 38.93 3.21
2689 3736 5.604758 ACTTCATCTAAGCAGAGCACATA 57.395 39.130 0.00 0.00 38.93 2.29
2690 3737 6.172136 ACTTCATCTAAGCAGAGCACATAT 57.828 37.500 0.00 0.00 38.93 1.78
2691 3738 7.295322 ACTTCATCTAAGCAGAGCACATATA 57.705 36.000 0.00 0.00 38.93 0.86
2692 3739 7.377398 ACTTCATCTAAGCAGAGCACATATAG 58.623 38.462 0.00 0.00 38.93 1.31
2693 3740 7.232330 ACTTCATCTAAGCAGAGCACATATAGA 59.768 37.037 0.00 0.00 38.93 1.98
2694 3741 7.155655 TCATCTAAGCAGAGCACATATAGAG 57.844 40.000 0.00 0.00 33.22 2.43
2695 3742 5.384063 TCTAAGCAGAGCACATATAGAGC 57.616 43.478 0.00 0.00 0.00 4.09
2696 3743 3.399440 AAGCAGAGCACATATAGAGCC 57.601 47.619 0.00 0.00 33.99 4.70
2697 3744 1.622811 AGCAGAGCACATATAGAGCCC 59.377 52.381 0.00 0.00 33.99 5.19
2698 3745 1.345741 GCAGAGCACATATAGAGCCCA 59.654 52.381 0.00 0.00 33.99 5.36
2699 3746 2.869636 GCAGAGCACATATAGAGCCCAC 60.870 54.545 0.00 0.00 33.99 4.61
2700 3747 1.974236 AGAGCACATATAGAGCCCACC 59.026 52.381 0.00 0.00 33.99 4.61
2701 3748 1.002544 GAGCACATATAGAGCCCACCC 59.997 57.143 0.00 0.00 33.99 4.61
2702 3749 1.059913 GCACATATAGAGCCCACCCT 58.940 55.000 0.00 0.00 0.00 4.34
2703 3750 1.271054 GCACATATAGAGCCCACCCTG 60.271 57.143 0.00 0.00 0.00 4.45
2704 3751 1.059913 ACATATAGAGCCCACCCTGC 58.940 55.000 0.00 0.00 0.00 4.85
2705 3752 0.036952 CATATAGAGCCCACCCTGCG 60.037 60.000 0.00 0.00 0.00 5.18
2706 3753 1.831652 ATATAGAGCCCACCCTGCGC 61.832 60.000 0.00 0.00 0.00 6.09
2707 3754 2.946988 TATAGAGCCCACCCTGCGCT 62.947 60.000 9.73 0.00 41.80 5.92
2712 3759 3.710722 CCCACCCTGCGCTCTCTT 61.711 66.667 9.73 0.00 0.00 2.85
2713 3760 2.348998 CCACCCTGCGCTCTCTTT 59.651 61.111 9.73 0.00 0.00 2.52
2714 3761 1.743252 CCACCCTGCGCTCTCTTTC 60.743 63.158 9.73 0.00 0.00 2.62
2715 3762 1.004560 CACCCTGCGCTCTCTTTCA 60.005 57.895 9.73 0.00 0.00 2.69
2716 3763 0.392193 CACCCTGCGCTCTCTTTCAT 60.392 55.000 9.73 0.00 0.00 2.57
2717 3764 1.134699 CACCCTGCGCTCTCTTTCATA 60.135 52.381 9.73 0.00 0.00 2.15
2718 3765 1.765314 ACCCTGCGCTCTCTTTCATAT 59.235 47.619 9.73 0.00 0.00 1.78
2719 3766 2.965831 ACCCTGCGCTCTCTTTCATATA 59.034 45.455 9.73 0.00 0.00 0.86
2720 3767 3.243907 ACCCTGCGCTCTCTTTCATATAC 60.244 47.826 9.73 0.00 0.00 1.47
2721 3768 3.006323 CCCTGCGCTCTCTTTCATATACT 59.994 47.826 9.73 0.00 0.00 2.12
2722 3769 4.218635 CCCTGCGCTCTCTTTCATATACTA 59.781 45.833 9.73 0.00 0.00 1.82
2723 3770 5.105554 CCCTGCGCTCTCTTTCATATACTAT 60.106 44.000 9.73 0.00 0.00 2.12
2724 3771 6.095580 CCCTGCGCTCTCTTTCATATACTATA 59.904 42.308 9.73 0.00 0.00 1.31
2725 3772 7.201866 CCCTGCGCTCTCTTTCATATACTATAT 60.202 40.741 9.73 0.00 0.00 0.86
2726 3773 7.860373 CCTGCGCTCTCTTTCATATACTATATC 59.140 40.741 9.73 0.00 0.00 1.63
2727 3774 8.512966 TGCGCTCTCTTTCATATACTATATCT 57.487 34.615 9.73 0.00 0.00 1.98
2728 3775 9.614792 TGCGCTCTCTTTCATATACTATATCTA 57.385 33.333 9.73 0.00 0.00 1.98
2739 3786 9.686683 TCATATACTATATCTAAGCAGAGCACA 57.313 33.333 0.00 0.00 33.22 4.57
2746 3793 9.911138 CTATATCTAAGCAGAGCACATATATGG 57.089 37.037 16.96 7.17 33.22 2.74
2747 3794 4.825422 TCTAAGCAGAGCACATATATGGC 58.175 43.478 16.96 15.70 0.00 4.40
2748 3795 2.486472 AGCAGAGCACATATATGGCC 57.514 50.000 16.96 0.00 0.00 5.36
2749 3796 1.004044 AGCAGAGCACATATATGGCCC 59.996 52.381 16.96 8.31 0.00 5.80
2750 3797 1.271543 GCAGAGCACATATATGGCCCA 60.272 52.381 16.96 0.00 0.00 5.36
2751 3798 2.430465 CAGAGCACATATATGGCCCAC 58.570 52.381 16.96 10.82 0.00 4.61
2752 3799 1.352352 AGAGCACATATATGGCCCACC 59.648 52.381 16.96 7.26 0.00 4.61
2753 3800 0.405585 AGCACATATATGGCCCACCC 59.594 55.000 16.96 0.00 33.59 4.61
2754 3801 0.405585 GCACATATATGGCCCACCCT 59.594 55.000 16.96 0.00 33.59 4.34
2755 3802 1.887956 GCACATATATGGCCCACCCTG 60.888 57.143 16.96 4.75 33.59 4.45
2756 3803 0.405585 ACATATATGGCCCACCCTGC 59.594 55.000 16.96 0.00 33.59 4.85
2757 3804 0.677731 CATATATGGCCCACCCTGCG 60.678 60.000 0.00 0.00 33.59 5.18
2758 3805 2.484287 ATATATGGCCCACCCTGCGC 62.484 60.000 0.00 0.00 33.59 6.09
2764 3811 3.710722 CCCACCCTGCGCTCTCTT 61.711 66.667 9.73 0.00 0.00 2.85
2765 3812 2.348998 CCACCCTGCGCTCTCTTT 59.651 61.111 9.73 0.00 0.00 2.52
2766 3813 1.743252 CCACCCTGCGCTCTCTTTC 60.743 63.158 9.73 0.00 0.00 2.62
2767 3814 1.743252 CACCCTGCGCTCTCTTTCC 60.743 63.158 9.73 0.00 0.00 3.13
2768 3815 1.915769 ACCCTGCGCTCTCTTTCCT 60.916 57.895 9.73 0.00 0.00 3.36
2769 3816 1.298014 CCCTGCGCTCTCTTTCCTT 59.702 57.895 9.73 0.00 0.00 3.36
2770 3817 0.742635 CCCTGCGCTCTCTTTCCTTC 60.743 60.000 9.73 0.00 0.00 3.46
2771 3818 1.080995 CCTGCGCTCTCTTTCCTTCG 61.081 60.000 9.73 0.00 0.00 3.79
2772 3819 1.079819 TGCGCTCTCTTTCCTTCGG 60.080 57.895 9.73 0.00 0.00 4.30
2773 3820 1.079750 GCGCTCTCTTTCCTTCGGT 60.080 57.895 0.00 0.00 0.00 4.69
2774 3821 1.079317 GCGCTCTCTTTCCTTCGGTC 61.079 60.000 0.00 0.00 0.00 4.79
2775 3822 0.458716 CGCTCTCTTTCCTTCGGTCC 60.459 60.000 0.00 0.00 0.00 4.46
2776 3823 0.899019 GCTCTCTTTCCTTCGGTCCT 59.101 55.000 0.00 0.00 0.00 3.85
2777 3824 1.134936 GCTCTCTTTCCTTCGGTCCTC 60.135 57.143 0.00 0.00 0.00 3.71
2778 3825 1.478916 CTCTCTTTCCTTCGGTCCTCC 59.521 57.143 0.00 0.00 0.00 4.30
2779 3826 1.077334 TCTCTTTCCTTCGGTCCTCCT 59.923 52.381 0.00 0.00 0.00 3.69
2780 3827 1.478916 CTCTTTCCTTCGGTCCTCCTC 59.521 57.143 0.00 0.00 0.00 3.71
2781 3828 0.537653 CTTTCCTTCGGTCCTCCTCC 59.462 60.000 0.00 0.00 0.00 4.30
2782 3829 0.116541 TTTCCTTCGGTCCTCCTCCT 59.883 55.000 0.00 0.00 0.00 3.69
2783 3830 0.116541 TTCCTTCGGTCCTCCTCCTT 59.883 55.000 0.00 0.00 0.00 3.36
2784 3831 0.324460 TCCTTCGGTCCTCCTCCTTC 60.324 60.000 0.00 0.00 0.00 3.46
2785 3832 1.331399 CCTTCGGTCCTCCTCCTTCC 61.331 65.000 0.00 0.00 0.00 3.46
2786 3833 1.305887 TTCGGTCCTCCTCCTTCCC 60.306 63.158 0.00 0.00 0.00 3.97
2787 3834 2.764547 CGGTCCTCCTCCTTCCCC 60.765 72.222 0.00 0.00 0.00 4.81
2788 3835 2.454941 GGTCCTCCTCCTTCCCCA 59.545 66.667 0.00 0.00 0.00 4.96
2789 3836 1.690985 GGTCCTCCTCCTTCCCCAG 60.691 68.421 0.00 0.00 0.00 4.45
2790 3837 1.081277 GTCCTCCTCCTTCCCCAGT 59.919 63.158 0.00 0.00 0.00 4.00
2791 3838 0.978667 GTCCTCCTCCTTCCCCAGTC 60.979 65.000 0.00 0.00 0.00 3.51
2792 3839 1.690985 CCTCCTCCTTCCCCAGTCC 60.691 68.421 0.00 0.00 0.00 3.85
2793 3840 1.690985 CTCCTCCTTCCCCAGTCCC 60.691 68.421 0.00 0.00 0.00 4.46
2794 3841 2.692741 CCTCCTTCCCCAGTCCCC 60.693 72.222 0.00 0.00 0.00 4.81
2795 3842 2.124996 CTCCTTCCCCAGTCCCCA 59.875 66.667 0.00 0.00 0.00 4.96
2796 3843 2.204090 TCCTTCCCCAGTCCCCAC 60.204 66.667 0.00 0.00 0.00 4.61
2797 3844 2.531685 CCTTCCCCAGTCCCCACA 60.532 66.667 0.00 0.00 0.00 4.17
2798 3845 1.930656 CCTTCCCCAGTCCCCACAT 60.931 63.158 0.00 0.00 0.00 3.21
2799 3846 1.304282 CTTCCCCAGTCCCCACATG 59.696 63.158 0.00 0.00 0.00 3.21
2800 3847 1.151699 TTCCCCAGTCCCCACATGA 60.152 57.895 0.00 0.00 0.00 3.07
2801 3848 0.552367 TTCCCCAGTCCCCACATGAT 60.552 55.000 0.00 0.00 0.00 2.45
2802 3849 0.988145 TCCCCAGTCCCCACATGATC 60.988 60.000 0.00 0.00 0.00 2.92
2803 3850 1.281199 CCCCAGTCCCCACATGATCA 61.281 60.000 0.00 0.00 0.00 2.92
2804 3851 0.107017 CCCAGTCCCCACATGATCAC 60.107 60.000 0.00 0.00 0.00 3.06
2805 3852 0.620030 CCAGTCCCCACATGATCACA 59.380 55.000 0.00 0.00 0.00 3.58
2806 3853 1.213678 CCAGTCCCCACATGATCACAT 59.786 52.381 0.00 0.00 37.19 3.21
2807 3854 2.439135 CCAGTCCCCACATGATCACATA 59.561 50.000 0.00 0.00 35.09 2.29
2808 3855 3.073503 CCAGTCCCCACATGATCACATAT 59.926 47.826 0.00 0.00 35.09 1.78
2809 3856 4.286808 CCAGTCCCCACATGATCACATATA 59.713 45.833 0.00 0.00 35.09 0.86
2810 3857 5.240891 CAGTCCCCACATGATCACATATAC 58.759 45.833 0.00 0.00 35.09 1.47
2811 3858 4.907269 AGTCCCCACATGATCACATATACA 59.093 41.667 0.00 0.00 35.09 2.29
2812 3859 5.369404 AGTCCCCACATGATCACATATACAA 59.631 40.000 0.00 0.00 35.09 2.41
2813 3860 5.470098 GTCCCCACATGATCACATATACAAC 59.530 44.000 0.00 0.00 35.09 3.32
2814 3861 5.131809 TCCCCACATGATCACATATACAACA 59.868 40.000 0.00 0.00 35.09 3.33
2815 3862 5.471116 CCCCACATGATCACATATACAACAG 59.529 44.000 0.00 0.00 35.09 3.16
2816 3863 5.049198 CCCACATGATCACATATACAACAGC 60.049 44.000 0.00 0.00 35.09 4.40
2817 3864 5.528320 CCACATGATCACATATACAACAGCA 59.472 40.000 0.00 0.00 35.09 4.41
2818 3865 6.293244 CCACATGATCACATATACAACAGCAG 60.293 42.308 0.00 0.00 35.09 4.24
2819 3866 5.237996 ACATGATCACATATACAACAGCAGC 59.762 40.000 0.00 0.00 35.09 5.25
2820 3867 4.768583 TGATCACATATACAACAGCAGCA 58.231 39.130 0.00 0.00 0.00 4.41
2821 3868 5.184711 TGATCACATATACAACAGCAGCAA 58.815 37.500 0.00 0.00 0.00 3.91
2822 3869 5.295045 TGATCACATATACAACAGCAGCAAG 59.705 40.000 0.00 0.00 0.00 4.01
2823 3870 3.374988 TCACATATACAACAGCAGCAAGC 59.625 43.478 0.00 0.00 46.19 4.01
2871 3918 2.973420 CGACTAATCGCCCCAAGTC 58.027 57.895 0.00 0.00 42.43 3.01
2872 3919 0.174845 CGACTAATCGCCCCAAGTCA 59.825 55.000 0.00 0.00 42.43 3.41
2873 3920 1.653151 GACTAATCGCCCCAAGTCAC 58.347 55.000 0.00 0.00 38.56 3.67
2874 3921 0.252197 ACTAATCGCCCCAAGTCACC 59.748 55.000 0.00 0.00 0.00 4.02
2875 3922 0.810031 CTAATCGCCCCAAGTCACCG 60.810 60.000 0.00 0.00 0.00 4.94
2876 3923 2.246761 TAATCGCCCCAAGTCACCGG 62.247 60.000 0.00 0.00 0.00 5.28
2880 3927 4.760047 CCCCAAGTCACCGGCGAG 62.760 72.222 9.30 0.06 0.00 5.03
2883 3930 4.680237 CAAGTCACCGGCGAGCCA 62.680 66.667 9.30 0.00 35.37 4.75
2884 3931 4.681978 AAGTCACCGGCGAGCCAC 62.682 66.667 9.30 4.61 35.37 5.01
2909 3956 4.742201 GCGCGACTTGCTCCCTGA 62.742 66.667 12.10 0.00 43.27 3.86
2910 3957 2.507992 CGCGACTTGCTCCCTGAG 60.508 66.667 0.00 0.00 43.27 3.35
2911 3958 2.659610 GCGACTTGCTCCCTGAGT 59.340 61.111 0.00 0.00 41.73 3.41
2912 3959 1.446966 GCGACTTGCTCCCTGAGTC 60.447 63.158 0.00 0.00 41.73 3.36
2913 3960 1.967535 CGACTTGCTCCCTGAGTCA 59.032 57.895 0.00 0.00 39.74 3.41
2914 3961 0.318441 CGACTTGCTCCCTGAGTCAA 59.682 55.000 0.00 0.00 39.74 3.18
2915 3962 1.671261 CGACTTGCTCCCTGAGTCAAG 60.671 57.143 18.26 18.26 42.97 3.02
2916 3963 1.428869 ACTTGCTCCCTGAGTCAAGT 58.571 50.000 19.11 19.11 44.07 3.16
2917 3964 1.346068 ACTTGCTCCCTGAGTCAAGTC 59.654 52.381 19.11 0.00 44.78 3.01
2918 3965 0.318441 TTGCTCCCTGAGTCAAGTCG 59.682 55.000 0.00 0.00 31.39 4.18
2919 3966 1.446966 GCTCCCTGAGTCAAGTCGC 60.447 63.158 0.00 0.00 31.39 5.19
2920 3967 1.216710 CTCCCTGAGTCAAGTCGCC 59.783 63.158 0.00 0.00 0.00 5.54
2921 3968 1.228894 TCCCTGAGTCAAGTCGCCT 60.229 57.895 0.00 0.00 0.00 5.52
2922 3969 1.079543 CCCTGAGTCAAGTCGCCTG 60.080 63.158 0.00 0.00 0.00 4.85
2923 3970 1.739562 CCTGAGTCAAGTCGCCTGC 60.740 63.158 0.00 0.00 0.00 4.85
2924 3971 2.049156 TGAGTCAAGTCGCCTGCG 60.049 61.111 4.92 4.92 41.35 5.18
2925 3972 2.049063 GAGTCAAGTCGCCTGCGT 60.049 61.111 11.68 0.00 40.74 5.24
2926 3973 2.356313 AGTCAAGTCGCCTGCGTG 60.356 61.111 11.68 2.89 40.74 5.34
2927 3974 2.355837 GTCAAGTCGCCTGCGTGA 60.356 61.111 11.68 5.36 40.74 4.35
2928 3975 2.049156 TCAAGTCGCCTGCGTGAG 60.049 61.111 11.68 1.10 40.74 3.51
2950 3997 3.853330 CCATGCCGCGACGACTTG 61.853 66.667 8.23 2.56 0.00 3.16
2951 3998 3.853330 CATGCCGCGACGACTTGG 61.853 66.667 8.23 0.00 0.00 3.61
2957 4004 4.082192 GCGACGACTTGGCGATTA 57.918 55.556 1.78 0.00 34.83 1.75
2958 4005 1.917921 GCGACGACTTGGCGATTAG 59.082 57.895 1.78 0.00 34.83 1.73
2959 4006 0.801067 GCGACGACTTGGCGATTAGT 60.801 55.000 1.78 0.00 34.83 2.24
2960 4007 1.189403 CGACGACTTGGCGATTAGTC 58.811 55.000 1.78 0.00 37.90 2.59
2970 4017 3.616935 CGATTAGTCGGCGACTCAA 57.383 52.632 42.01 31.20 42.40 3.02
2971 4018 1.904144 CGATTAGTCGGCGACTCAAA 58.096 50.000 42.01 31.76 42.40 2.69
2972 4019 2.256174 CGATTAGTCGGCGACTCAAAA 58.744 47.619 42.01 31.07 42.40 2.44
2973 4020 2.664568 CGATTAGTCGGCGACTCAAAAA 59.335 45.455 42.01 30.73 42.40 1.94
2974 4021 3.481467 CGATTAGTCGGCGACTCAAAAAC 60.481 47.826 42.01 27.53 42.40 2.43
2975 4022 2.512485 TAGTCGGCGACTCAAAAACA 57.488 45.000 42.01 22.77 42.40 2.83
2976 4023 1.217882 AGTCGGCGACTCAAAAACAG 58.782 50.000 34.91 0.00 38.71 3.16
2977 4024 1.202486 AGTCGGCGACTCAAAAACAGA 60.202 47.619 34.91 0.00 38.71 3.41
2978 4025 1.192534 GTCGGCGACTCAAAAACAGAG 59.807 52.381 31.15 0.00 39.04 3.35
2980 4027 1.070577 CGGCGACTCAAAAACAGAGTG 60.071 52.381 0.00 0.00 45.79 3.51
2981 4028 1.940613 GGCGACTCAAAAACAGAGTGT 59.059 47.619 0.00 0.00 45.79 3.55
2982 4029 2.286418 GGCGACTCAAAAACAGAGTGTG 60.286 50.000 0.00 0.00 45.79 3.82
2983 4030 2.351726 GCGACTCAAAAACAGAGTGTGT 59.648 45.455 0.00 0.00 45.79 3.72
3052 4100 2.924290 GCTGATGTTTACAGTCGACTCC 59.076 50.000 16.96 2.03 37.64 3.85
3080 4129 3.005554 ACCAGCACGAAATCTGAATCAG 58.994 45.455 3.38 3.38 32.26 2.90
3142 4191 4.164843 TGCTTACTTTCTTGGTGAACCT 57.835 40.909 0.37 0.00 36.82 3.50
3200 4267 3.285484 CCATATGCTTGGCTCTTTCAGT 58.715 45.455 0.00 0.00 0.00 3.41
3201 4268 3.698040 CCATATGCTTGGCTCTTTCAGTT 59.302 43.478 0.00 0.00 0.00 3.16
3202 4269 4.159135 CCATATGCTTGGCTCTTTCAGTTT 59.841 41.667 0.00 0.00 0.00 2.66
4337 10246 3.328535 ACATTTTGTCCCTTGGGTCTT 57.671 42.857 5.51 0.00 0.00 3.01
4460 10369 7.307042 GGTTCATATTCAGATCTTCGTGATGTG 60.307 40.741 0.00 10.34 44.85 3.21
4516 10427 0.749649 TTTTGAACCGCCAAGTGCAT 59.250 45.000 0.00 0.00 41.33 3.96
4578 10495 3.509575 CAGGCTTTTGTGGGCTTTATACA 59.490 43.478 0.00 0.00 37.49 2.29
4655 10573 9.651913 ACATTTTCTCAACAATAAACTGTGTTT 57.348 25.926 1.33 1.33 35.81 2.83
4734 10652 5.591877 AGAGTCAAAATGAGCAGAAGTTTGT 59.408 36.000 0.00 0.00 32.34 2.83
4781 10699 6.721571 TTTCTTAGTTATCTTGCCAACTCG 57.278 37.500 0.00 0.00 36.44 4.18
4961 10890 7.432148 TCCTTTAGGTGATGCAGTAATCTTA 57.568 36.000 0.00 0.00 36.34 2.10
4983 10912 8.724229 TCTTATATGCATAATTGAGTGTCATGC 58.276 33.333 11.13 1.02 41.81 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 1.546834 GAGCGCGACGACTATTTCTT 58.453 50.000 12.10 0.00 0.00 2.52
119 120 0.598158 CCCACGAACCGTTCTCGAAA 60.598 55.000 9.55 0.00 38.32 3.46
126 127 1.080298 GACGATCCCACGAACCGTT 60.080 57.895 0.00 0.00 38.32 4.44
167 168 4.783055 AGATGAGTCAGTGTAGACCGTAT 58.217 43.478 0.00 0.00 39.34 3.06
237 238 7.864379 CCCAGAAACAATATGAAGATGCATAAC 59.136 37.037 0.00 0.00 34.67 1.89
421 422 3.347958 TTTTTAACAGGCGACTTGCTG 57.652 42.857 0.00 0.00 45.43 4.41
882 1494 2.515057 AACGCACCAACGGCTTGA 60.515 55.556 0.00 0.00 37.37 3.02
884 1496 3.591835 CCAACGCACCAACGGCTT 61.592 61.111 0.00 0.00 37.37 4.35
941 1564 0.688087 GGGACGGGAAGGTGAGAGAT 60.688 60.000 0.00 0.00 0.00 2.75
942 1565 1.305046 GGGACGGGAAGGTGAGAGA 60.305 63.158 0.00 0.00 0.00 3.10
944 1567 2.284405 GGGGACGGGAAGGTGAGA 60.284 66.667 0.00 0.00 0.00 3.27
946 1569 2.206036 AAGGGGACGGGAAGGTGA 59.794 61.111 0.00 0.00 0.00 4.02
988 1645 1.648720 CGGCCATTCTATGCGGTTG 59.351 57.895 2.24 0.00 0.00 3.77
1115 1772 3.282745 GACGGGCGAGTGCTGAGAA 62.283 63.158 0.00 0.00 42.25 2.87
1900 2589 9.905713 AAGAGGTGCAGAAACAAGATATAAATA 57.094 29.630 0.00 0.00 0.00 1.40
1901 2590 8.814038 AAGAGGTGCAGAAACAAGATATAAAT 57.186 30.769 0.00 0.00 0.00 1.40
1959 2707 5.679734 AGCACGCTAATTTCAATATGGAG 57.320 39.130 0.00 0.00 0.00 3.86
2030 2780 6.945435 TGCAAAGATAGAAGTCATGGGTTTAA 59.055 34.615 0.00 0.00 0.00 1.52
2031 2781 6.480763 TGCAAAGATAGAAGTCATGGGTTTA 58.519 36.000 0.00 0.00 0.00 2.01
2488 3535 0.106149 ACTCGGCGACTCAAAAACCT 59.894 50.000 4.99 0.00 0.00 3.50
2489 3536 0.511653 GACTCGGCGACTCAAAAACC 59.488 55.000 4.99 0.00 0.00 3.27
2490 3537 1.214367 TGACTCGGCGACTCAAAAAC 58.786 50.000 15.32 0.00 0.00 2.43
2491 3538 1.864711 CTTGACTCGGCGACTCAAAAA 59.135 47.619 24.85 10.09 0.00 1.94
2492 3539 1.497991 CTTGACTCGGCGACTCAAAA 58.502 50.000 24.85 10.66 0.00 2.44
2493 3540 0.944311 GCTTGACTCGGCGACTCAAA 60.944 55.000 24.85 13.67 0.00 2.69
2494 3541 1.372997 GCTTGACTCGGCGACTCAA 60.373 57.895 23.85 23.85 0.00 3.02
2495 3542 2.258591 GCTTGACTCGGCGACTCA 59.741 61.111 13.98 13.98 0.00 3.41
2496 3543 2.507324 GGCTTGACTCGGCGACTC 60.507 66.667 4.99 7.64 0.00 3.36
2497 3544 2.771763 CTTGGCTTGACTCGGCGACT 62.772 60.000 4.99 0.00 0.00 4.18
2498 3545 2.357034 TTGGCTTGACTCGGCGAC 60.357 61.111 4.99 0.00 0.00 5.19
2499 3546 2.048222 CTTGGCTTGACTCGGCGA 60.048 61.111 10.14 10.14 0.00 5.54
2500 3547 2.357517 ACTTGGCTTGACTCGGCG 60.358 61.111 0.00 0.00 0.00 6.46
2501 3548 2.383527 CGACTTGGCTTGACTCGGC 61.384 63.158 0.00 0.00 0.00 5.54
2502 3549 2.383527 GCGACTTGGCTTGACTCGG 61.384 63.158 0.00 0.00 0.00 4.63
2503 3550 2.383527 GGCGACTTGGCTTGACTCG 61.384 63.158 0.00 0.00 40.72 4.18
2504 3551 2.383527 CGGCGACTTGGCTTGACTC 61.384 63.158 0.00 0.00 42.02 3.36
2505 3552 2.357517 CGGCGACTTGGCTTGACT 60.358 61.111 0.00 0.00 42.02 3.41
2506 3553 2.357034 TCGGCGACTTGGCTTGAC 60.357 61.111 4.99 0.00 42.02 3.18
2507 3554 2.048222 CTCGGCGACTTGGCTTGA 60.048 61.111 4.99 0.00 42.02 3.02
2508 3555 3.121030 CCTCGGCGACTTGGCTTG 61.121 66.667 4.99 0.00 42.02 4.01
2521 3568 4.880537 CCACTAGCCGCAGCCTCG 62.881 72.222 0.00 0.00 41.25 4.63
2524 3571 4.785453 AAGCCACTAGCCGCAGCC 62.785 66.667 4.60 0.00 45.47 4.85
2525 3572 3.503363 CAAGCCACTAGCCGCAGC 61.503 66.667 4.60 0.00 45.47 5.25
2526 3573 3.503363 GCAAGCCACTAGCCGCAG 61.503 66.667 4.60 0.00 45.47 5.18
2527 3574 4.020617 AGCAAGCCACTAGCCGCA 62.021 61.111 4.60 0.00 45.47 5.69
2528 3575 3.503363 CAGCAAGCCACTAGCCGC 61.503 66.667 0.00 0.00 45.47 6.53
2529 3576 2.821366 CCAGCAAGCCACTAGCCG 60.821 66.667 0.00 0.00 45.47 5.52
2530 3577 3.136791 GCCAGCAAGCCACTAGCC 61.137 66.667 0.00 0.00 45.47 3.93
2531 3578 1.676967 AAGCCAGCAAGCCACTAGC 60.677 57.895 0.00 0.00 44.25 3.42
2532 3579 0.321919 TCAAGCCAGCAAGCCACTAG 60.322 55.000 0.00 0.00 0.00 2.57
2533 3580 0.321919 CTCAAGCCAGCAAGCCACTA 60.322 55.000 0.00 0.00 0.00 2.74
2534 3581 1.602888 CTCAAGCCAGCAAGCCACT 60.603 57.895 0.00 0.00 0.00 4.00
2535 3582 1.860484 GACTCAAGCCAGCAAGCCAC 61.860 60.000 0.00 0.00 0.00 5.01
2536 3583 1.601759 GACTCAAGCCAGCAAGCCA 60.602 57.895 0.00 0.00 0.00 4.75
2537 3584 2.684843 CGACTCAAGCCAGCAAGCC 61.685 63.158 0.00 0.00 0.00 4.35
2538 3585 2.684843 CCGACTCAAGCCAGCAAGC 61.685 63.158 0.00 0.00 0.00 4.01
2539 3586 2.684843 GCCGACTCAAGCCAGCAAG 61.685 63.158 0.00 0.00 0.00 4.01
2540 3587 2.669569 GCCGACTCAAGCCAGCAA 60.670 61.111 0.00 0.00 0.00 3.91
2542 3589 4.742201 TCGCCGACTCAAGCCAGC 62.742 66.667 0.00 0.00 0.00 4.85
2543 3590 2.771763 AAGTCGCCGACTCAAGCCAG 62.772 60.000 21.49 0.00 42.59 4.85
2544 3591 2.867855 AAGTCGCCGACTCAAGCCA 61.868 57.895 21.49 0.00 42.59 4.75
2545 3592 2.048127 AAGTCGCCGACTCAAGCC 60.048 61.111 21.49 0.00 42.59 4.35
2546 3593 2.383527 CCAAGTCGCCGACTCAAGC 61.384 63.158 21.49 0.00 42.59 4.01
2547 3594 2.383527 GCCAAGTCGCCGACTCAAG 61.384 63.158 21.49 12.92 42.59 3.02
2548 3595 2.357034 GCCAAGTCGCCGACTCAA 60.357 61.111 21.49 0.00 42.59 3.02
2549 3596 2.867855 AAGCCAAGTCGCCGACTCA 61.868 57.895 21.49 0.00 42.59 3.41
2550 3597 2.048127 AAGCCAAGTCGCCGACTC 60.048 61.111 21.49 8.32 42.59 3.36
2551 3598 2.172483 ATCAAGCCAAGTCGCCGACT 62.172 55.000 15.18 15.18 45.64 4.18
2552 3599 1.298859 AATCAAGCCAAGTCGCCGAC 61.299 55.000 9.71 9.71 0.00 4.79
2553 3600 0.248012 TAATCAAGCCAAGTCGCCGA 59.752 50.000 0.00 0.00 0.00 5.54
2554 3601 0.652592 CTAATCAAGCCAAGTCGCCG 59.347 55.000 0.00 0.00 0.00 6.46
2555 3602 1.666189 GACTAATCAAGCCAAGTCGCC 59.334 52.381 0.00 0.00 30.03 5.54
2564 3611 1.017387 CTTGGGGCGACTAATCAAGC 58.983 55.000 0.00 0.00 0.00 4.01
2565 3612 2.280628 GACTTGGGGCGACTAATCAAG 58.719 52.381 10.82 10.82 40.21 3.02
2566 3613 1.404986 CGACTTGGGGCGACTAATCAA 60.405 52.381 0.00 0.00 0.00 2.57
2567 3614 0.174845 CGACTTGGGGCGACTAATCA 59.825 55.000 0.00 0.00 0.00 2.57
2568 3615 1.152383 GCGACTTGGGGCGACTAATC 61.152 60.000 0.00 0.00 0.00 1.75
2569 3616 1.153429 GCGACTTGGGGCGACTAAT 60.153 57.895 0.00 0.00 0.00 1.73
2570 3617 2.263540 GCGACTTGGGGCGACTAA 59.736 61.111 0.00 0.00 0.00 2.24
2571 3618 3.766691 GGCGACTTGGGGCGACTA 61.767 66.667 0.00 0.00 31.57 2.59
2573 3620 4.778143 ATGGCGACTTGGGGCGAC 62.778 66.667 0.00 0.00 35.73 5.19
2574 3621 4.776322 CATGGCGACTTGGGGCGA 62.776 66.667 0.00 0.00 32.13 5.54
2580 3627 1.081242 GTTGTGCCATGGCGACTTG 60.081 57.895 30.87 0.00 45.51 3.16
2581 3628 1.518056 CTGTTGTGCCATGGCGACTT 61.518 55.000 30.87 0.00 45.51 3.01
2582 3629 1.968017 CTGTTGTGCCATGGCGACT 60.968 57.895 30.87 0.00 45.51 4.18
2583 3630 0.953471 TACTGTTGTGCCATGGCGAC 60.953 55.000 30.87 26.94 45.51 5.19
2584 3631 0.953471 GTACTGTTGTGCCATGGCGA 60.953 55.000 30.87 17.92 45.51 5.54
2585 3632 1.233950 TGTACTGTTGTGCCATGGCG 61.234 55.000 30.87 18.00 45.51 5.69
2586 3633 1.176527 ATGTACTGTTGTGCCATGGC 58.823 50.000 30.54 30.54 42.35 4.40
2587 3634 3.872696 TCTATGTACTGTTGTGCCATGG 58.127 45.455 7.63 7.63 0.00 3.66
2588 3635 3.310774 GCTCTATGTACTGTTGTGCCATG 59.689 47.826 0.00 0.00 0.00 3.66
2589 3636 3.055167 TGCTCTATGTACTGTTGTGCCAT 60.055 43.478 0.00 0.00 0.00 4.40
2590 3637 2.301583 TGCTCTATGTACTGTTGTGCCA 59.698 45.455 0.00 0.00 0.00 4.92
2591 3638 2.932614 CTGCTCTATGTACTGTTGTGCC 59.067 50.000 0.00 0.00 0.00 5.01
2592 3639 2.349886 GCTGCTCTATGTACTGTTGTGC 59.650 50.000 0.00 0.00 0.00 4.57
2593 3640 3.588955 TGCTGCTCTATGTACTGTTGTG 58.411 45.455 0.00 0.00 0.00 3.33
2594 3641 3.511540 TCTGCTGCTCTATGTACTGTTGT 59.488 43.478 0.00 0.00 0.00 3.32
2595 3642 4.111198 CTCTGCTGCTCTATGTACTGTTG 58.889 47.826 0.00 0.00 0.00 3.33
2596 3643 3.430098 GCTCTGCTGCTCTATGTACTGTT 60.430 47.826 0.00 0.00 0.00 3.16
2597 3644 2.100584 GCTCTGCTGCTCTATGTACTGT 59.899 50.000 0.00 0.00 0.00 3.55
2598 3645 2.100418 TGCTCTGCTGCTCTATGTACTG 59.900 50.000 0.00 0.00 0.00 2.74
2599 3646 2.100584 GTGCTCTGCTGCTCTATGTACT 59.899 50.000 0.00 0.00 0.00 2.73
2600 3647 2.159184 TGTGCTCTGCTGCTCTATGTAC 60.159 50.000 0.00 0.00 0.00 2.90
2601 3648 2.102578 TGTGCTCTGCTGCTCTATGTA 58.897 47.619 0.00 0.00 0.00 2.29
2602 3649 0.900421 TGTGCTCTGCTGCTCTATGT 59.100 50.000 0.00 0.00 0.00 2.29
2603 3650 2.242047 ATGTGCTCTGCTGCTCTATG 57.758 50.000 0.00 0.00 0.00 2.23
2604 3651 3.229293 TCTATGTGCTCTGCTGCTCTAT 58.771 45.455 0.00 0.00 0.00 1.98
2605 3652 2.659428 TCTATGTGCTCTGCTGCTCTA 58.341 47.619 0.00 0.00 0.00 2.43
2606 3653 1.482954 TCTATGTGCTCTGCTGCTCT 58.517 50.000 0.00 0.00 0.00 4.09
2607 3654 2.529780 ATCTATGTGCTCTGCTGCTC 57.470 50.000 0.00 0.00 0.00 4.26
2608 3655 4.525874 TGTATATCTATGTGCTCTGCTGCT 59.474 41.667 0.00 0.00 0.00 4.24
2609 3656 4.814147 TGTATATCTATGTGCTCTGCTGC 58.186 43.478 0.00 0.00 0.00 5.25
2610 3657 4.863689 GCTGTATATCTATGTGCTCTGCTG 59.136 45.833 0.00 0.00 0.00 4.41
2611 3658 4.525874 TGCTGTATATCTATGTGCTCTGCT 59.474 41.667 0.00 0.00 0.00 4.24
2612 3659 4.814147 TGCTGTATATCTATGTGCTCTGC 58.186 43.478 0.00 0.00 0.00 4.26
2613 3660 4.863689 GCTGCTGTATATCTATGTGCTCTG 59.136 45.833 0.00 0.00 0.00 3.35
2614 3661 4.525874 TGCTGCTGTATATCTATGTGCTCT 59.474 41.667 0.00 0.00 0.00 4.09
2615 3662 4.814147 TGCTGCTGTATATCTATGTGCTC 58.186 43.478 0.00 0.00 0.00 4.26
2616 3663 4.525874 TCTGCTGCTGTATATCTATGTGCT 59.474 41.667 0.00 0.00 0.00 4.40
2617 3664 4.814147 TCTGCTGCTGTATATCTATGTGC 58.186 43.478 0.00 0.00 0.00 4.57
2618 3665 6.685657 TCTTCTGCTGCTGTATATCTATGTG 58.314 40.000 0.00 0.00 0.00 3.21
2619 3666 6.572119 GCTCTTCTGCTGCTGTATATCTATGT 60.572 42.308 0.00 0.00 0.00 2.29
2620 3667 5.806502 GCTCTTCTGCTGCTGTATATCTATG 59.193 44.000 0.00 0.00 0.00 2.23
2621 3668 5.479724 TGCTCTTCTGCTGCTGTATATCTAT 59.520 40.000 0.00 0.00 0.00 1.98
2622 3669 4.829492 TGCTCTTCTGCTGCTGTATATCTA 59.171 41.667 0.00 0.00 0.00 1.98
2623 3670 3.640498 TGCTCTTCTGCTGCTGTATATCT 59.360 43.478 0.00 0.00 0.00 1.98
2624 3671 3.740321 GTGCTCTTCTGCTGCTGTATATC 59.260 47.826 0.00 0.00 0.00 1.63
2625 3672 3.133542 TGTGCTCTTCTGCTGCTGTATAT 59.866 43.478 0.00 0.00 0.00 0.86
2626 3673 2.497273 TGTGCTCTTCTGCTGCTGTATA 59.503 45.455 0.00 0.00 0.00 1.47
2627 3674 1.277273 TGTGCTCTTCTGCTGCTGTAT 59.723 47.619 0.00 0.00 0.00 2.29
2628 3675 0.681175 TGTGCTCTTCTGCTGCTGTA 59.319 50.000 0.00 0.00 0.00 2.74
2629 3676 0.036448 ATGTGCTCTTCTGCTGCTGT 59.964 50.000 0.00 0.00 0.00 4.40
2630 3677 2.019948 TATGTGCTCTTCTGCTGCTG 57.980 50.000 0.00 0.00 0.00 4.41
2631 3678 3.133542 TGTATATGTGCTCTTCTGCTGCT 59.866 43.478 0.00 0.00 0.00 4.24
2632 3679 3.461061 TGTATATGTGCTCTTCTGCTGC 58.539 45.455 0.00 0.00 0.00 5.25
2633 3680 4.872124 TGTTGTATATGTGCTCTTCTGCTG 59.128 41.667 0.00 0.00 0.00 4.41
2634 3681 5.089970 TGTTGTATATGTGCTCTTCTGCT 57.910 39.130 0.00 0.00 0.00 4.24
2635 3682 5.111989 TCTGTTGTATATGTGCTCTTCTGC 58.888 41.667 0.00 0.00 0.00 4.26
2636 3683 6.567959 TCTCTGTTGTATATGTGCTCTTCTG 58.432 40.000 0.00 0.00 0.00 3.02
2637 3684 6.782082 TCTCTGTTGTATATGTGCTCTTCT 57.218 37.500 0.00 0.00 0.00 2.85
2638 3685 7.834068 TTTCTCTGTTGTATATGTGCTCTTC 57.166 36.000 0.00 0.00 0.00 2.87
2639 3686 8.798859 ATTTTCTCTGTTGTATATGTGCTCTT 57.201 30.769 0.00 0.00 0.00 2.85
2658 3705 9.487790 GCTCTGCTTAGATGAAGTATATTTTCT 57.512 33.333 0.00 0.00 37.49 2.52
2659 3706 9.265901 TGCTCTGCTTAGATGAAGTATATTTTC 57.734 33.333 0.00 0.00 37.49 2.29
2660 3707 9.050601 GTGCTCTGCTTAGATGAAGTATATTTT 57.949 33.333 0.00 0.00 37.49 1.82
2661 3708 8.206867 TGTGCTCTGCTTAGATGAAGTATATTT 58.793 33.333 0.00 0.00 37.49 1.40
2662 3709 7.730084 TGTGCTCTGCTTAGATGAAGTATATT 58.270 34.615 0.00 0.00 37.49 1.28
2663 3710 7.295322 TGTGCTCTGCTTAGATGAAGTATAT 57.705 36.000 0.00 0.00 37.49 0.86
2664 3711 6.715347 TGTGCTCTGCTTAGATGAAGTATA 57.285 37.500 0.00 0.00 37.49 1.47
2665 3712 5.604758 TGTGCTCTGCTTAGATGAAGTAT 57.395 39.130 0.00 0.00 37.49 2.12
2666 3713 5.604758 ATGTGCTCTGCTTAGATGAAGTA 57.395 39.130 0.00 0.00 37.49 2.24
2667 3714 3.969287 TGTGCTCTGCTTAGATGAAGT 57.031 42.857 0.00 0.00 37.49 3.01
2668 3715 7.600960 TCTATATGTGCTCTGCTTAGATGAAG 58.399 38.462 0.00 0.00 38.30 3.02
2669 3716 7.530426 TCTATATGTGCTCTGCTTAGATGAA 57.470 36.000 0.00 0.00 0.00 2.57
2670 3717 6.350027 GCTCTATATGTGCTCTGCTTAGATGA 60.350 42.308 0.00 0.00 32.89 2.92
2671 3718 5.806502 GCTCTATATGTGCTCTGCTTAGATG 59.193 44.000 0.00 0.00 32.89 2.90
2672 3719 5.105392 GGCTCTATATGTGCTCTGCTTAGAT 60.105 44.000 0.00 0.00 35.67 1.98
2673 3720 4.219507 GGCTCTATATGTGCTCTGCTTAGA 59.780 45.833 0.00 0.00 35.67 2.10
2674 3721 4.493547 GGCTCTATATGTGCTCTGCTTAG 58.506 47.826 0.00 0.00 35.67 2.18
2675 3722 3.259374 GGGCTCTATATGTGCTCTGCTTA 59.741 47.826 0.00 0.00 33.23 3.09
2676 3723 2.038295 GGGCTCTATATGTGCTCTGCTT 59.962 50.000 0.00 0.00 33.23 3.91
2677 3724 1.622811 GGGCTCTATATGTGCTCTGCT 59.377 52.381 0.00 0.00 33.23 4.24
2678 3725 1.345741 TGGGCTCTATATGTGCTCTGC 59.654 52.381 0.00 0.00 36.66 4.26
2679 3726 2.289320 GGTGGGCTCTATATGTGCTCTG 60.289 54.545 0.00 0.00 36.66 3.35
2680 3727 1.974236 GGTGGGCTCTATATGTGCTCT 59.026 52.381 0.00 0.00 36.66 4.09
2681 3728 1.002544 GGGTGGGCTCTATATGTGCTC 59.997 57.143 0.00 0.00 36.29 4.26
2682 3729 1.059913 GGGTGGGCTCTATATGTGCT 58.940 55.000 0.00 0.00 35.67 4.40
2683 3730 1.059913 AGGGTGGGCTCTATATGTGC 58.940 55.000 0.00 0.00 34.70 4.57
2684 3731 1.271054 GCAGGGTGGGCTCTATATGTG 60.271 57.143 0.00 0.00 0.00 3.21
2685 3732 1.059913 GCAGGGTGGGCTCTATATGT 58.940 55.000 0.00 0.00 0.00 2.29
2686 3733 0.036952 CGCAGGGTGGGCTCTATATG 60.037 60.000 0.00 0.00 0.00 1.78
2687 3734 2.366469 CGCAGGGTGGGCTCTATAT 58.634 57.895 0.00 0.00 0.00 0.86
2688 3735 3.870955 CGCAGGGTGGGCTCTATA 58.129 61.111 0.00 0.00 0.00 1.31
2695 3742 3.259633 AAAGAGAGCGCAGGGTGGG 62.260 63.158 11.47 0.00 0.00 4.61
2696 3743 1.743252 GAAAGAGAGCGCAGGGTGG 60.743 63.158 11.47 0.00 0.00 4.61
2697 3744 0.392193 ATGAAAGAGAGCGCAGGGTG 60.392 55.000 11.47 0.00 0.00 4.61
2698 3745 1.195115 TATGAAAGAGAGCGCAGGGT 58.805 50.000 11.47 0.00 0.00 4.34
2699 3746 2.540265 ATATGAAAGAGAGCGCAGGG 57.460 50.000 11.47 0.00 0.00 4.45
2700 3747 4.250116 AGTATATGAAAGAGAGCGCAGG 57.750 45.455 11.47 0.00 0.00 4.85
2701 3748 8.620416 AGATATAGTATATGAAAGAGAGCGCAG 58.380 37.037 11.47 0.00 0.00 5.18
2702 3749 8.512966 AGATATAGTATATGAAAGAGAGCGCA 57.487 34.615 11.47 0.00 0.00 6.09
2713 3760 9.686683 TGTGCTCTGCTTAGATATAGTATATGA 57.313 33.333 7.41 0.00 0.00 2.15
2720 3767 9.911138 CCATATATGTGCTCTGCTTAGATATAG 57.089 37.037 11.73 0.00 0.00 1.31
2721 3768 8.363390 GCCATATATGTGCTCTGCTTAGATATA 58.637 37.037 11.73 0.00 0.00 0.86
2722 3769 7.215789 GCCATATATGTGCTCTGCTTAGATAT 58.784 38.462 11.73 0.00 0.00 1.63
2723 3770 6.407412 GGCCATATATGTGCTCTGCTTAGATA 60.407 42.308 19.25 0.00 0.00 1.98
2724 3771 5.426504 GCCATATATGTGCTCTGCTTAGAT 58.573 41.667 11.73 0.00 0.00 1.98
2725 3772 4.323028 GGCCATATATGTGCTCTGCTTAGA 60.323 45.833 19.25 0.00 0.00 2.10
2726 3773 3.937706 GGCCATATATGTGCTCTGCTTAG 59.062 47.826 19.25 1.17 0.00 2.18
2727 3774 3.307691 GGGCCATATATGTGCTCTGCTTA 60.308 47.826 19.25 0.00 0.00 3.09
2728 3775 2.553904 GGGCCATATATGTGCTCTGCTT 60.554 50.000 19.25 0.00 0.00 3.91
2729 3776 1.004044 GGGCCATATATGTGCTCTGCT 59.996 52.381 19.25 0.00 0.00 4.24
2730 3777 1.271543 TGGGCCATATATGTGCTCTGC 60.272 52.381 20.12 12.07 0.00 4.26
2731 3778 2.430465 GTGGGCCATATATGTGCTCTG 58.570 52.381 10.70 4.47 0.00 3.35
2732 3779 1.352352 GGTGGGCCATATATGTGCTCT 59.648 52.381 10.70 0.00 34.09 4.09
2733 3780 1.614317 GGGTGGGCCATATATGTGCTC 60.614 57.143 10.70 17.39 36.17 4.26
2734 3781 0.405585 GGGTGGGCCATATATGTGCT 59.594 55.000 10.70 0.00 36.17 4.40
2735 3782 0.405585 AGGGTGGGCCATATATGTGC 59.594 55.000 10.70 13.26 36.17 4.57
2736 3783 1.887956 GCAGGGTGGGCCATATATGTG 60.888 57.143 10.70 3.16 36.17 3.21
2737 3784 0.405585 GCAGGGTGGGCCATATATGT 59.594 55.000 10.70 0.00 36.17 2.29
2738 3785 0.677731 CGCAGGGTGGGCCATATATG 60.678 60.000 10.70 8.08 36.17 1.78
2739 3786 1.685224 CGCAGGGTGGGCCATATAT 59.315 57.895 10.70 0.00 36.17 0.86
2740 3787 3.156714 CGCAGGGTGGGCCATATA 58.843 61.111 10.70 0.00 36.17 0.86
2747 3794 3.259633 AAAGAGAGCGCAGGGTGGG 62.260 63.158 11.47 0.00 0.00 4.61
2748 3795 1.743252 GAAAGAGAGCGCAGGGTGG 60.743 63.158 11.47 0.00 0.00 4.61
2749 3796 1.743252 GGAAAGAGAGCGCAGGGTG 60.743 63.158 11.47 0.00 0.00 4.61
2750 3797 1.484444 AAGGAAAGAGAGCGCAGGGT 61.484 55.000 11.47 0.00 0.00 4.34
2751 3798 0.742635 GAAGGAAAGAGAGCGCAGGG 60.743 60.000 11.47 0.00 0.00 4.45
2752 3799 1.080995 CGAAGGAAAGAGAGCGCAGG 61.081 60.000 11.47 0.00 0.00 4.85
2753 3800 2.367844 CGAAGGAAAGAGAGCGCAG 58.632 57.895 11.47 0.00 0.00 5.18
2754 3801 4.578913 CGAAGGAAAGAGAGCGCA 57.421 55.556 11.47 0.00 0.00 6.09
2767 3814 1.331399 GGGAAGGAGGAGGACCGAAG 61.331 65.000 0.00 0.00 41.83 3.79
2768 3815 1.305887 GGGAAGGAGGAGGACCGAA 60.306 63.158 0.00 0.00 41.83 4.30
2769 3816 2.363361 GGGAAGGAGGAGGACCGA 59.637 66.667 0.00 0.00 41.83 4.69
2770 3817 2.764547 GGGGAAGGAGGAGGACCG 60.765 72.222 0.00 0.00 41.83 4.79
2771 3818 1.690985 CTGGGGAAGGAGGAGGACC 60.691 68.421 0.00 0.00 0.00 4.46
2772 3819 0.978667 GACTGGGGAAGGAGGAGGAC 60.979 65.000 0.00 0.00 0.00 3.85
2773 3820 1.392534 GACTGGGGAAGGAGGAGGA 59.607 63.158 0.00 0.00 0.00 3.71
2774 3821 1.690985 GGACTGGGGAAGGAGGAGG 60.691 68.421 0.00 0.00 0.00 4.30
2775 3822 1.690985 GGGACTGGGGAAGGAGGAG 60.691 68.421 0.00 0.00 0.00 3.69
2776 3823 2.454941 GGGACTGGGGAAGGAGGA 59.545 66.667 0.00 0.00 0.00 3.71
2777 3824 2.692741 GGGGACTGGGGAAGGAGG 60.693 72.222 0.00 0.00 0.00 4.30
2778 3825 2.124996 TGGGGACTGGGGAAGGAG 59.875 66.667 0.00 0.00 0.00 3.69
2779 3826 2.204090 GTGGGGACTGGGGAAGGA 60.204 66.667 0.00 0.00 0.00 3.36
2780 3827 1.930656 ATGTGGGGACTGGGGAAGG 60.931 63.158 0.00 0.00 0.00 3.46
2781 3828 1.207488 TCATGTGGGGACTGGGGAAG 61.207 60.000 0.00 0.00 0.00 3.46
2782 3829 0.552367 ATCATGTGGGGACTGGGGAA 60.552 55.000 0.00 0.00 0.00 3.97
2783 3830 0.988145 GATCATGTGGGGACTGGGGA 60.988 60.000 0.00 0.00 0.00 4.81
2784 3831 1.281199 TGATCATGTGGGGACTGGGG 61.281 60.000 0.00 0.00 0.00 4.96
2785 3832 0.107017 GTGATCATGTGGGGACTGGG 60.107 60.000 0.00 0.00 0.00 4.45
2786 3833 0.620030 TGTGATCATGTGGGGACTGG 59.380 55.000 0.00 0.00 0.00 4.00
2787 3834 2.723322 ATGTGATCATGTGGGGACTG 57.277 50.000 0.00 0.00 32.51 3.51
2788 3835 4.907269 TGTATATGTGATCATGTGGGGACT 59.093 41.667 0.00 0.00 35.70 3.85
2789 3836 5.227569 TGTATATGTGATCATGTGGGGAC 57.772 43.478 0.00 0.00 35.70 4.46
2790 3837 5.131809 TGTTGTATATGTGATCATGTGGGGA 59.868 40.000 0.00 0.00 35.70 4.81
2791 3838 5.375773 TGTTGTATATGTGATCATGTGGGG 58.624 41.667 0.00 0.00 35.70 4.96
2792 3839 5.049198 GCTGTTGTATATGTGATCATGTGGG 60.049 44.000 0.00 0.00 35.70 4.61
2793 3840 5.528320 TGCTGTTGTATATGTGATCATGTGG 59.472 40.000 0.00 0.00 35.70 4.17
2794 3841 6.607735 TGCTGTTGTATATGTGATCATGTG 57.392 37.500 0.00 0.00 35.70 3.21
2795 3842 5.237996 GCTGCTGTTGTATATGTGATCATGT 59.762 40.000 0.00 0.00 35.70 3.21
2796 3843 5.237779 TGCTGCTGTTGTATATGTGATCATG 59.762 40.000 0.00 0.00 35.70 3.07
2797 3844 5.370679 TGCTGCTGTTGTATATGTGATCAT 58.629 37.500 0.00 0.00 38.00 2.45
2798 3845 4.768583 TGCTGCTGTTGTATATGTGATCA 58.231 39.130 0.00 0.00 0.00 2.92
2799 3846 5.739752 TTGCTGCTGTTGTATATGTGATC 57.260 39.130 0.00 0.00 0.00 2.92
2800 3847 4.036027 GCTTGCTGCTGTTGTATATGTGAT 59.964 41.667 0.00 0.00 38.95 3.06
2801 3848 3.374988 GCTTGCTGCTGTTGTATATGTGA 59.625 43.478 0.00 0.00 38.95 3.58
2802 3849 3.488047 GGCTTGCTGCTGTTGTATATGTG 60.488 47.826 0.00 0.00 42.39 3.21
2803 3850 2.684881 GGCTTGCTGCTGTTGTATATGT 59.315 45.455 0.00 0.00 42.39 2.29
2804 3851 2.684374 TGGCTTGCTGCTGTTGTATATG 59.316 45.455 0.00 0.00 42.39 1.78
2805 3852 2.684881 GTGGCTTGCTGCTGTTGTATAT 59.315 45.455 0.00 0.00 42.39 0.86
2806 3853 2.083774 GTGGCTTGCTGCTGTTGTATA 58.916 47.619 0.00 0.00 42.39 1.47
2807 3854 0.883833 GTGGCTTGCTGCTGTTGTAT 59.116 50.000 0.00 0.00 42.39 2.29
2808 3855 1.506309 CGTGGCTTGCTGCTGTTGTA 61.506 55.000 0.00 0.00 42.39 2.41
2809 3856 2.837883 CGTGGCTTGCTGCTGTTGT 61.838 57.895 0.00 0.00 42.39 3.32
2810 3857 2.050714 CGTGGCTTGCTGCTGTTG 60.051 61.111 0.00 0.00 42.39 3.33
2811 3858 3.969802 GCGTGGCTTGCTGCTGTT 61.970 61.111 0.00 0.00 42.39 3.16
2854 3901 1.653151 GTGACTTGGGGCGATTAGTC 58.347 55.000 0.00 0.00 37.97 2.59
2855 3902 0.252197 GGTGACTTGGGGCGATTAGT 59.748 55.000 0.00 0.00 0.00 2.24
2856 3903 0.810031 CGGTGACTTGGGGCGATTAG 60.810 60.000 0.00 0.00 0.00 1.73
2857 3904 1.219664 CGGTGACTTGGGGCGATTA 59.780 57.895 0.00 0.00 0.00 1.75
2858 3905 2.046314 CGGTGACTTGGGGCGATT 60.046 61.111 0.00 0.00 0.00 3.34
2859 3906 4.096003 CCGGTGACTTGGGGCGAT 62.096 66.667 0.00 0.00 0.00 4.58
2863 3910 4.760047 CTCGCCGGTGACTTGGGG 62.760 72.222 15.21 0.00 39.40 4.96
2866 3913 4.680237 TGGCTCGCCGGTGACTTG 62.680 66.667 15.21 5.94 39.42 3.16
2867 3914 4.681978 GTGGCTCGCCGGTGACTT 62.682 66.667 15.21 0.00 39.42 3.01
2894 3941 1.446966 GACTCAGGGAGCAAGTCGC 60.447 63.158 0.00 0.00 42.91 5.19
2895 3942 0.318441 TTGACTCAGGGAGCAAGTCG 59.682 55.000 0.00 0.00 41.84 4.18
2896 3943 1.346068 ACTTGACTCAGGGAGCAAGTC 59.654 52.381 20.24 7.29 44.78 3.01
2897 3944 1.428869 ACTTGACTCAGGGAGCAAGT 58.571 50.000 20.24 20.24 44.07 3.16
2898 3945 1.671261 CGACTTGACTCAGGGAGCAAG 60.671 57.143 19.40 19.40 42.97 4.01
2899 3946 0.318441 CGACTTGACTCAGGGAGCAA 59.682 55.000 0.00 0.00 32.04 3.91
2900 3947 1.967535 CGACTTGACTCAGGGAGCA 59.032 57.895 0.00 0.00 32.04 4.26
2901 3948 1.446966 GCGACTTGACTCAGGGAGC 60.447 63.158 0.00 0.00 32.04 4.70
2902 3949 1.216710 GGCGACTTGACTCAGGGAG 59.783 63.158 0.00 0.00 35.52 4.30
2903 3950 1.228894 AGGCGACTTGACTCAGGGA 60.229 57.895 0.00 0.00 37.44 4.20
2904 3951 1.079543 CAGGCGACTTGACTCAGGG 60.080 63.158 0.00 0.00 40.21 4.45
2905 3952 1.739562 GCAGGCGACTTGACTCAGG 60.740 63.158 0.00 0.00 40.21 3.86
2906 3953 2.091112 CGCAGGCGACTTGACTCAG 61.091 63.158 8.15 0.00 40.21 3.35
2907 3954 2.049156 CGCAGGCGACTTGACTCA 60.049 61.111 8.15 0.00 40.21 3.41
2908 3955 2.049063 ACGCAGGCGACTTGACTC 60.049 61.111 21.62 0.00 40.21 3.36
2909 3956 2.356313 CACGCAGGCGACTTGACT 60.356 61.111 21.62 0.00 40.21 3.41
2910 3957 2.355837 TCACGCAGGCGACTTGAC 60.356 61.111 21.62 0.00 40.21 3.18
2911 3958 2.049156 CTCACGCAGGCGACTTGA 60.049 61.111 21.62 12.48 40.21 3.02
2912 3959 3.782244 GCTCACGCAGGCGACTTG 61.782 66.667 21.62 8.53 40.21 3.16
2919 3966 4.790962 ATGGCTGGCTCACGCAGG 62.791 66.667 2.00 0.00 38.10 4.85
2920 3967 3.506096 CATGGCTGGCTCACGCAG 61.506 66.667 2.00 0.00 38.10 5.18
2933 3980 3.853330 CAAGTCGTCGCGGCATGG 61.853 66.667 12.89 0.00 32.13 3.66
2934 3981 3.853330 CCAAGTCGTCGCGGCATG 61.853 66.667 12.89 3.49 32.13 4.06
2940 3987 0.801067 ACTAATCGCCAAGTCGTCGC 60.801 55.000 0.00 0.00 0.00 5.19
2941 3988 1.189403 GACTAATCGCCAAGTCGTCG 58.811 55.000 0.00 0.00 33.38 5.12
2952 3999 1.904144 TTTGAGTCGCCGACTAATCG 58.096 50.000 21.28 0.00 43.53 3.34
2953 4000 3.430895 TGTTTTTGAGTCGCCGACTAATC 59.569 43.478 21.28 8.92 43.53 1.75
2954 4001 3.395639 TGTTTTTGAGTCGCCGACTAAT 58.604 40.909 21.28 0.00 43.53 1.73
2955 4002 2.798283 CTGTTTTTGAGTCGCCGACTAA 59.202 45.455 21.28 10.60 43.53 2.24
2956 4003 2.034939 TCTGTTTTTGAGTCGCCGACTA 59.965 45.455 21.28 2.04 43.53 2.59
2957 4004 1.202486 TCTGTTTTTGAGTCGCCGACT 60.202 47.619 21.41 21.41 46.42 4.18
2958 4005 1.192534 CTCTGTTTTTGAGTCGCCGAC 59.807 52.381 9.71 9.71 0.00 4.79
2959 4006 1.202486 ACTCTGTTTTTGAGTCGCCGA 60.202 47.619 0.00 0.00 40.35 5.54
2960 4007 1.070577 CACTCTGTTTTTGAGTCGCCG 60.071 52.381 0.00 0.00 42.21 6.46
2961 4008 1.940613 ACACTCTGTTTTTGAGTCGCC 59.059 47.619 0.00 0.00 42.21 5.54
2962 4009 2.351726 ACACACTCTGTTTTTGAGTCGC 59.648 45.455 0.00 0.00 42.21 5.19
2963 4010 4.334443 CAACACACTCTGTTTTTGAGTCG 58.666 43.478 0.00 0.00 41.50 4.18
2964 4011 4.098416 GCAACACACTCTGTTTTTGAGTC 58.902 43.478 0.00 0.00 41.50 3.36
2965 4012 3.119495 GGCAACACACTCTGTTTTTGAGT 60.119 43.478 0.00 0.00 41.50 3.41
2966 4013 3.438360 GGCAACACACTCTGTTTTTGAG 58.562 45.455 0.00 0.00 41.50 3.02
2967 4014 2.165437 GGGCAACACACTCTGTTTTTGA 59.835 45.455 0.00 0.00 41.50 2.69
2968 4015 2.094286 TGGGCAACACACTCTGTTTTTG 60.094 45.455 0.00 0.00 41.50 2.44
2969 4016 2.166254 CTGGGCAACACACTCTGTTTTT 59.834 45.455 0.00 0.00 41.50 1.94
2970 4017 1.750778 CTGGGCAACACACTCTGTTTT 59.249 47.619 0.00 0.00 41.50 2.43
2971 4018 1.340991 ACTGGGCAACACACTCTGTTT 60.341 47.619 0.00 0.00 41.50 2.83
2972 4019 0.255890 ACTGGGCAACACACTCTGTT 59.744 50.000 0.00 0.00 44.51 3.16
2973 4020 0.255890 AACTGGGCAACACACTCTGT 59.744 50.000 0.00 0.00 39.74 3.41
2974 4021 2.254546 TAACTGGGCAACACACTCTG 57.745 50.000 0.00 0.00 39.74 3.35
2975 4022 2.783135 CATAACTGGGCAACACACTCT 58.217 47.619 0.00 0.00 39.74 3.24
2976 4023 1.200020 GCATAACTGGGCAACACACTC 59.800 52.381 0.00 0.00 39.74 3.51
2977 4024 1.202927 AGCATAACTGGGCAACACACT 60.203 47.619 0.00 0.00 39.74 3.55
2978 4025 1.247567 AGCATAACTGGGCAACACAC 58.752 50.000 0.00 0.00 39.74 3.82
2979 4026 2.869101 TAGCATAACTGGGCAACACA 57.131 45.000 0.00 0.00 39.74 3.72
2980 4027 2.358898 CCATAGCATAACTGGGCAACAC 59.641 50.000 0.00 0.00 39.74 3.32
2981 4028 2.653726 CCATAGCATAACTGGGCAACA 58.346 47.619 0.00 0.00 39.74 3.33
2982 4029 1.338020 GCCATAGCATAACTGGGCAAC 59.662 52.381 0.00 0.00 45.01 4.17
2983 4030 1.215173 AGCCATAGCATAACTGGGCAA 59.785 47.619 0.00 0.00 46.93 4.52
2984 4031 0.846015 AGCCATAGCATAACTGGGCA 59.154 50.000 0.00 0.00 46.93 5.36
2985 4032 2.039084 AGTAGCCATAGCATAACTGGGC 59.961 50.000 0.00 0.00 45.64 5.36
2986 4033 4.357918 AAGTAGCCATAGCATAACTGGG 57.642 45.455 0.00 0.00 43.56 4.45
2987 4034 7.986085 AAATAAGTAGCCATAGCATAACTGG 57.014 36.000 0.00 0.00 43.56 4.00
3052 4100 2.093973 AGATTTCGTGCTGGTGACCTAG 60.094 50.000 2.11 0.00 0.00 3.02
3142 4191 8.883731 GCACTAAGTATTTCAAGCATAGAAGAA 58.116 33.333 0.00 0.00 0.00 2.52
4150 7555 1.747709 AAGCTTCTGCAGAATCGCAT 58.252 45.000 30.92 22.04 42.06 4.73
4245 10133 9.938280 AATTTAGCAACAAGATACTAGTGTACA 57.062 29.630 5.39 0.00 0.00 2.90
4337 10246 3.492102 ACTTTCACAAGCTGCTCCTAA 57.508 42.857 1.00 0.00 32.57 2.69
4460 10369 1.888512 TGAAACAATGCAGGAAGCCTC 59.111 47.619 0.00 0.00 44.83 4.70
4578 10495 8.888716 GTTTTTGTTTTTGTTCCATACATTCCT 58.111 29.630 0.00 0.00 36.44 3.36
4734 10652 8.862325 AAATTGGTGTATATTCTCACTGTTCA 57.138 30.769 0.00 0.00 35.26 3.18
4781 10699 8.794335 AATAGTTGGAGTCAGAAAATTAGACC 57.206 34.615 0.00 0.00 32.82 3.85
4961 10890 5.471116 ACGCATGACACTCAATTATGCATAT 59.529 36.000 7.36 0.00 43.10 1.78
4983 10912 4.846779 TTTTCTTTTGAGGGAATGGACG 57.153 40.909 0.00 0.00 0.00 4.79



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.